Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0001360

Physical Location & Seq

Genomic Coordinates Forward (+)

15322118 .. 15323593

Gene Structure 1476 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027795

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGATTCTTTCCAACCCATTCTTTCTGCTAGTGCTGGCGGTCTGTATATTCGTGGCGGTTCGTGTGCTTCTGTACAAAACTGGGTTGGTTTATATTGTGAAGAAGTGGTGGCGGGCGGTGGAGGACTGCTTCCATGTCTACCAGTCGTTCAAAGTCCCCGAATTCAACGAAAGTATGCAGGAGAATCAGCTCTACTGCAAGGTCACCGTCTATCTCAACTCATTGACCTCCATTGAAGACTCCGATTTCACCAATCTCGTCACCGGGAAAAAGCCCAACGAGATCGTGCTCCAGCTCGACCCCAACCAGACCATCGAAGACGACTTTCTCGGGGCCAAGGTCAGGTGGCAAAGCGAAGCAAGTAAGGGCTCCAATAATTGCCGGAATTTGGTGTTGAAGGTTCGGAAAGCCGATAAGCGGCGGATTCTGCGGCCGTACTTGCAGCACATCCACGTCGTCGCCGACGAGCTGGACCAGCGGAAGCGAGATTTGCGGCTGTACATGAACGTCGACGACTCCGCCACGGCAGGCGACGACTTCCGCAACGCGCGGTGGAGGGCCGTGCCGTTCACGCACCCATCCACGCTGGAGACGATTGCCATGGAAGCCGATCTCAAATCGAAGATCAAGTCCGATTTGGAGTCGTTTCTCAAAGCCAAGCAGTACTACAACCGACTCGGCCGCGTCTGGAAGCGAAGCTTCTTGCTTTACGGCCCCTCCGGCACCGGGAAATCCAGCTTCGTCGCCGCCATGGCCAATTTCCTCGGCTACGACGTCTACGATCTCGACCTCTCTAGGGTTAAAGACGACTCGGAGTTGAAGATGCTTCTTTTACAGACCACGAGCAAGTCGGTGATCCTCATCGAGGACCTGGATCGGTTCTTCGCCGAGAAATCGACGGCCGTCAGCTTCTCCGGCATATCGAACTTCATGGACGGCTTGCTCAACTCGTGCTGCGCCGAAGAGAGAGTCATGGTGTTCACGATGAACTCGAAGGACCAGGTCGACCCGAATTTCCTCAGACCGGGTCGGATCGACGTCCACATCCATTTTCCGTTATGTGATTTCACGGCGTTTCGGAACCTAGCGACGAGCTATTTGGGGGTGAAGGAGCACAAGCTGTTCCCCCAGGTGGAGGAGATTTTCCAATCCGGGTCGAGTTTGAGCCCGGCCGAGATCGGCGAGCTCATGATCGCGAACCGGAACTCGCCGAGCCGGGCGATCAAGTCGGTCATCACGGCGTTGCAAACCGACGGTGATGGGAGGGGGGCGGGGAAGACCGGACGCCCGCCGAGGTGGTTCGAAACCGGGTCGAGAAAGTCCGGGGGGGACGAGTCGGGCGAACCCGGAGTTGTGTTATGTGGGGAAGGTGTGAATACGGTTAGGGATTTTAGAAAGCTTTACGGGTTTTTGAGGATGAGAGGCAGCAAGAATTCTCAGTCGTTCGATGCGGGGTCGGAGCGGTCGGCGGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017062 GO:0017111 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0033108 GO:0034551 GO:0034622 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

492

Amino Acids

55.44

Weight (kDa)

8.72

Isoelectric Point (pI)

44.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	31 - 118	1.2e-13	Domain associated at C-terminal with AAA
AAA	PF00004	235 - 353	3.7e-16	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	354 - 417	3.1e-11	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46620
fragaria_vesca	FvH4_7g17220 FvH4_7g32500
malus_domestica	MD01G1085900.v1.1 MD01G1225700.v1.1 MD02G1229200.v1.1 MD07G1155000.v1.1 MD07G1296200.v1.1
prunus_persica	Prupe.2G193700_v2.0.a1 Prupe.2G315800_v2.0.a1
pyrus_communis	pycom01g23420 pycom07g15210 pycom07g26900
rosa_chinensis	RchiOBHm_Chr1g0360611 RchiOBHm_Chr1g0382341 RchiOBHm_Chr2g0086831 RchiOBHm_Chr2g0139501 RchiOBHm_Chr3g0458211 RchiOBHm_Chr3g0478421 RchiOBHm_Chr4g0427361
rosa_laevigata	RLG00000002572 RLG00000009827 RLG00000026185 RLG00000027795 RLG00000030781
rosa_multiflora	Rmu_sc0000110.1_g000040 Rmu_sc0001436.1_g000033 Rmu_sc0002188.1_g000003 Rmu_sc0002535.1_g000007 Rmu_sc0003020.1_g000016 Rmu_sc0003481.1_g000013 Rmu_sc0004697.1_g000002 Rmu_sc0007558.1_g000001 Rmu_sc0010192.1_g000001 Rmu_sc0015587.1_g000001 Rmu_sc0042341.1_g000002
rosa_roxburghii	Rroxscaffold_2G00093530 Rroxscaffold_4G00278180
rosa_rugosa	Rorug01G0280000 Rorug01G0433500 Rorug02G0149500 Rorug05G0571400
rosa_samantha	Rh1AG292200 Rh1BG257100 Rh1BG414500 Rh1CG274900 Rh1DG287000 Rh1DG446600 Rh5BG487600 Rh5CG511800
rosa_wichuraiana	Rw1G025870 Rw1G041280 Rw5G043520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	777, 1041
AccB1I	GGYRCC	1 cut(s)	722
AccBSI	CCGCTC	1 cut(s)	1462
AccI	GTMKAC	4 cut(s)	138, 510, 777, 1005
AccII	CGCG	4 cut(s)	548, 550, 684, 1196
AclWI	GGATC	3 cut(s)	850, 882, 1040
AcoI	YGGCCR	5 cut(s)	431, 679, 753, 900, 1170
AcsI	RAATTY	4 cut(s)	161, 385, 1012, 1432
AcyI	GRCGYC	3 cut(s)	774, 1038, 1285
AfaI	GTAC	4 cut(s)	74, 437, 500, 665
AfiI	CCNNNNNNNGG	9 cut(s)	342, 388, 417, 726, 796, 865, 1024, 1132, 1135
AgsI	TTSAA	5 cut(s)	151, 166, 236, 397, 820
AjiI	CACGTC	1 cut(s)	454
AjnI	CCWGG	3 cut(s)	870, 999, 1128
Alw21I	GWGCWC	3 cut(s)	291, 1116, 1188
Alw26I	GTCTC	1 cut(s)	584
AlwI	GGATC	3 cut(s)	850, 882, 1040
Ama87I	CYCGRG	1 cut(s)	329
AoxI	GGCC	8 cut(s)	333, 431, 558, 679, 712, 753, 900, 1170
ApeKI	GCWGC	3 cut(s)	442, 954, 1425
ApoI	RAATTY	4 cut(s)	161, 385, 1012, 1432
ArsI	GACNNNNNNTTYG	6 cut(s)	614, 646, 954, 986, 1081, 1113
AspLEI	GCGC	2 cut(s)	550, 959
AspS9I	GGNCC	6 cut(s)	333, 472, 558, 713, 868, 997
AsuC2I	CCSGG	9 cut(s)	265, 727, 1026, 1153, 1169, 1217, 1309, 1324, 1347
AsuHPI	GGTGA	6 cut(s)	196, 241, 253, 865, 1117, 1268
AsuII	TTCGAA	1 cut(s)	1302
AvaI	CYCGRG	1 cut(s)	329
AvaII	GGWCC	3 cut(s)	472, 868, 997
BalI	TGGCCA	1 cut(s)	755
BanI	GGYRCC	1 cut(s)	722
BanII	GRGCYC	3 cut(s)	371, 1169, 1188
BauI	CACGAG	2 cut(s)	841, 949
BbsI	GAAGAC	3 cut(s)	243, 324, 1283
Bbv12I	GWGCWC	3 cut(s)	291, 1116, 1188
BbvI	GCAGC	3 cut(s)	454, 941, 1437
BccI	CCATC	3 cut(s)	320, 586, 1253
BciT130I	CCWGG	3 cut(s)	872, 1001, 1130
BcnI	CCSGG	9 cut(s)	265, 727, 1026, 1153, 1169, 1217, 1309, 1324, 1347
BcoDI	GTCTC	1 cut(s)	584
BfaI	CTAG	3 cut(s)	29, 795, 1085
BglI	GCCNNNNNGGC	2 cut(s)	720, 752
BisI	GCNGC	8 cut(s)	419, 431, 443, 494, 682, 747, 955, 1426
BlsI	GCNGC	8 cut(s)	420, 432, 444, 495, 683, 748, 956, 1427
BmcAI	AGTACT	1 cut(s)	665
Bme18I	GGWCC	3 cut(s)	472, 868, 997
BmeT110I	CYCGRG	1 cut(s)	329
BmgBI	CACGTC	1 cut(s)	454
BmgT120I	GGNCC	6 cut(s)	333, 472, 558, 713, 868, 997
BmiI	GGNNCC	5 cut(s)	334, 370, 715, 724, 1082
BmrI	ACTGGG	1 cut(s)	90
BmsI	GCATC	2 cut(s)	813, 1438
BmuI	ACTGGG	1 cut(s)	90
BoxI	GACNNNNGTC	1 cut(s)	902
BpiI	GAAGAC	3 cut(s)	243, 324, 1283
BpmI	CTGGAG	2 cut(s)	275, 608
Bpu14I	TTCGAA	1 cut(s)	1302
BpuMI	CCSGG	9 cut(s)	265, 727, 1026, 1153, 1169, 1217, 1309, 1324, 1347
BsaBI	GATNNNNATC	1 cut(s)	860
BsaHI	GRCGYC	3 cut(s)	774, 1038, 1285
BsaJI	CCNNGG	8 cut(s)	336, 522, 600, 750, 763, 1128, 1292, 1323
BsaWI	WCCGGW	2 cut(s)	1200, 1280
BsaXI	ACNNNNNCTCC	2 cut(s)	701, 731
Bsc4I	CCNNNNNNNGG	9 cut(s)	342, 388, 417, 726, 796, 865, 1024, 1132, 1135
Bse1I	ACTGG	2 cut(s)	85, 142
Bse8I	GATNNNNATC	1 cut(s)	860
BseBI	CCWGG	3 cut(s)	872, 1001, 1130
BseDI	CCNNGG	8 cut(s)	336, 522, 600, 750, 763, 1128, 1292, 1323
BseGI	GGATG	4 cut(s)	447, 578, 1044, 1422
BseJI	GATNNNNATC	1 cut(s)	860
BseLI	CCNNNNNNNGG	9 cut(s)	342, 388, 417, 726, 796, 865, 1024, 1132, 1135
BseMII	CTCAG	2 cut(s)	1033, 1451
BseNI	ACTGG	2 cut(s)	85, 142
BseRI	GAGGAG	1 cut(s)	1151
BseX3I	CGGCCG	4 cut(s)	431, 679, 900, 1170
BseXI	GCAGC	3 cut(s)	454, 941, 1437
Bsh1236I	CGCG	4 cut(s)	548, 550, 684, 1196
Bsh1285I	CGRYCG	5 cut(s)	434, 682, 903, 1173, 1466
BshFI	GGCC	8 cut(s)	335, 433, 560, 681, 714, 755, 902, 1172
BshNI	GGYRCC	1 cut(s)	722
BsiEI	CGRYCG	5 cut(s)	434, 682, 903, 1173, 1466
BsiHKAI	GWGCWC	3 cut(s)	291, 1116, 1188
BsiHKCI	CYCGRG	1 cut(s)	329
BslFI	GGGAC	2 cut(s)	140, 1343
BslI	CCNNNNNNNGG	9 cut(s)	342, 388, 417, 726, 796, 865, 1024, 1132, 1135
BsmAI	GTCTC	1 cut(s)	584
BsmBI	CGTCTC	1 cut(s)	584
BsmFI	GGGAC	2 cut(s)	140, 1343
BsnI	GGCC	8 cut(s)	335, 433, 560, 681, 714, 755, 902, 1172
BsoBI	CYCGRG	1 cut(s)	329
Bsp119I	TTCGAA	1 cut(s)	1302
Bsp1286I	GDGCHC	5 cut(s)	291, 371, 1116, 1169, 1188
Bsp1407I	TGTACA	2 cut(s)	72, 498
Bsp19I	CCATGG	2 cut(s)	600, 750
Bsp68I	TCGCGA	1 cut(s)	1196
BspANI	GGCC	8 cut(s)	335, 433, 560, 681, 714, 755, 902, 1172
BspCNI	CTCAG	2 cut(s)	1032, 1450
BspFNI	CGCG	4 cut(s)	548, 550, 684, 1196
BspHI	TCATGA	1 cut(s)	1188
BspLI	GGNNCC	5 cut(s)	334, 370, 715, 724, 1082
BspPI	GGATC	3 cut(s)	850, 882, 1040
BspT104I	TTCGAA	1 cut(s)	1302
BspT107I	GGYRCC	1 cut(s)	722
BsrBI	CCGCTC	1 cut(s)	1462
BsrGI	TGTACA	2 cut(s)	72, 498
BsrI	ACTGG	2 cut(s)	85, 142
BssECI	CCNNGG	8 cut(s)	336, 522, 600, 750, 763, 1128, 1292, 1323
BssNI	GRCGYC	3 cut(s)	774, 1038, 1285
BssSI	CACGAG	2 cut(s)	841, 949
BssT1I	CCWWGG	3 cut(s)	336, 600, 750
Bst2BI	CACGAG	2 cut(s)	841, 949
Bst2UI	CCWGG	3 cut(s)	872, 1001, 1130
Bst4CI	ACNGT	3 cut(s)	208, 1256, 1381
Bst6I	CTCTTC	1 cut(s)	957
BstACI	GRCGYC	3 cut(s)	774, 1038, 1285
BstAUI	TGTACA	2 cut(s)	72, 498
BstBI	TTCGAA	1 cut(s)	1302
BstC8I	GCNNGC	7 cut(s)	36, 114, 529, 941, 1184, 1289, 1471
BstDEI	CTNAG	2 cut(s)	1019, 1437
BstDSI	CCRYGG	3 cut(s)	522, 600, 750
BstEII	GGTNACC	1 cut(s)	202
BstENI	CCTNNNNNAGG	1 cut(s)	863
BstF5I	GGATG	4 cut(s)	447, 578, 1044, 1422
BstFNI	CGCG	4 cut(s)	548, 550, 684, 1196
BstHHI	GCGC	2 cut(s)	550, 959
BstMAI	GTCTC	1 cut(s)	584
BstMCI	CGRYCG	5 cut(s)	434, 682, 903, 1173, 1466
BstMWI	GCNNNNNNNGC	9 cut(s)	427, 439, 475, 490, 571, 605, 720, 752, 915
BstNI	CCWGG	3 cut(s)	872, 1001, 1130
BstPAI	GACNNNNGTC	1 cut(s)	902
BstPI	GGTNACC	1 cut(s)	202
BstUI	CGCG	4 cut(s)	548, 550, 684, 1196
BstV1I	GCAGC	3 cut(s)	454, 941, 1437
BstV2I	GAAGAC	3 cut(s)	243, 324, 1283
BstZI	CGGCCG	4 cut(s)	431, 679, 900, 1170
BsuRI	GGCC	8 cut(s)	335, 433, 560, 681, 714, 755, 902, 1172
BtgI	CCRYGG	3 cut(s)	522, 600, 750
BtrI	CACGTC	1 cut(s)	454
BtsCI	GGATG	4 cut(s)	447, 578, 1044, 1422
BtuMI	TCGCGA	1 cut(s)	1196
Cac8I	GCNNGC	7 cut(s)	36, 114, 529, 941, 1184, 1289, 1471
CciI	TCATGA	1 cut(s)	1188
CfoI	GCGC	2 cut(s)	550, 959
Cfr13I	GGNCC	6 cut(s)	333, 472, 558, 713, 868, 997
CseI	GACGC	2 cut(s)	673, 1293
CsiI	ACCWGGT	1 cut(s)	999
Csp6I	GTAC	4 cut(s)	73, 436, 499, 664
CviAII	CATG	7 cut(s)	134, 502, 601, 751, 931, 973, 1189
CviQI	GTAC	4 cut(s)	73, 436, 499, 664
DdeI	CTNAG	2 cut(s)	1019, 1437
EaeI	YGGCCR	5 cut(s)	431, 679, 753, 900, 1170
EagI	CGGCCG	4 cut(s)	431, 679, 900, 1170
Eam1104I	CTCTTC	1 cut(s)	957
EarI	CTCTTC	1 cut(s)	957
EciI	GGCGGA	2 cut(s)	436, 508
Ecl136II	GAGCTC	1 cut(s)	1186
EclXI	CGGCCG	4 cut(s)	431, 679, 900, 1170
Eco130I	CCWWGG	3 cut(s)	336, 600, 750
Eco24I	GRGCYC	3 cut(s)	371, 1169, 1188
Eco47I	GGWCC	3 cut(s)	472, 868, 997
Eco52I	CGGCCG	4 cut(s)	431, 679, 900, 1170
Eco53kI	GAGCTC	1 cut(s)	1186
Eco88I	CYCGRG	1 cut(s)	329
Eco91I	GGTNACC	1 cut(s)	202
EcoICRI	GAGCTC	1 cut(s)	1186
EcoNI	CCTNNNNNAGG	1 cut(s)	863
EcoO109I	RGGNCCY	1 cut(s)	868
EcoO65I	GGTNACC	1 cut(s)	202
EcoRI	GAATTC	2 cut(s)	161, 1432
EcoRII	CCWGG	3 cut(s)	870, 999, 1128
EcoT14I	CCWWGG	3 cut(s)	336, 600, 750
EcoT38I	GRGCYC	3 cut(s)	371, 1169, 1188
ErhI	CCWWGG	3 cut(s)	336, 600, 750
Esp3I	CGTCTC	1 cut(s)	584
FaeI	CATG	7 cut(s)	137, 505, 604, 754, 934, 976, 1192
FalI	AAGNNNNNCTT	2 cut(s)	683, 715
FaqI	GGGAC	2 cut(s)	140, 1343
FatI	CATG	7 cut(s)	133, 501, 600, 750, 930, 972, 1188
FauI	CCCGC	5 cut(s)	105, 1264, 1296, 1444, 1462
FblI	GTMKAC	4 cut(s)	138, 510, 777, 1005
Fnu4HI	GCNGC	8 cut(s)	419, 431, 443, 494, 682, 747, 955, 1426
FokI	GGATG	4 cut(s)	434, 565, 1031, 1429
FriOI	GRGCYC	3 cut(s)	371, 1169, 1188
Fsp4HI	GCNGC	8 cut(s)	419, 431, 443, 494, 682, 747, 955, 1426
FspBI	CTAG	3 cut(s)	29, 795, 1085
GlaI	GCGC	2 cut(s)	549, 958
GluI	GCNGC	8 cut(s)	419, 431, 443, 494, 682, 747, 955, 1426
GsuI	CTGGAG	2 cut(s)	275, 608
HaeIII	GGCC	8 cut(s)	335, 433, 560, 681, 714, 755, 902, 1172
HgaI	GACGC	2 cut(s)	673, 1293
HhaI	GCGC	2 cut(s)	550, 959
Hin1I	GRCGYC	3 cut(s)	774, 1038, 1285
Hin1II	CATG	7 cut(s)	137, 505, 604, 754, 934, 976, 1192
Hin6I	GCGC	2 cut(s)	548, 957
HinP1I	GCGC	2 cut(s)	548, 957
HincII	GTYRAC	2 cut(s)	511, 1006
HindII	GTYRAC	2 cut(s)	511, 1006
HindIII	AAGCTT	2 cut(s)	697, 1397
HphI	GGTGA	6 cut(s)	196, 241, 253, 865, 1117, 1268
Hpy166II	GTNNAC	7 cut(s)	139, 511, 570, 778, 981, 1006, 1042
Hpy188I	TCNGA	8 cut(s)	244, 405, 634, 814, 1022, 1032, 1080, 1459
Hpy188III	TCNNGA	6 cut(s)	688, 785, 982, 1189, 1195, 1314
Hpy8I	GTNNAC	7 cut(s)	139, 511, 570, 778, 981, 1006, 1042
HpyAV	CCTTC	4 cut(s)	391, 988, 1102, 1361
HpyCH4III	ACNGT	3 cut(s)	208, 1256, 1381
HpyCH4IV	ACGT	4 cut(s)	453, 507, 774, 1038
HpyCH4V	TGCA	4 cut(s)	178, 198, 442, 1246
HpyF10VI	GCNNNNNNNGC	9 cut(s)	427, 439, 475, 490, 571, 605, 720, 752, 915
HpyF3I	CTNAG	2 cut(s)	1019, 1437
HpySE526I	ACGT	4 cut(s)	453, 507, 774, 1038
Hsp92I	GRCGYC	3 cut(s)	774, 1038, 1285
Hsp92II	CATG	7 cut(s)	137, 505, 604, 754, 934, 976, 1192
HspAI	GCGC	2 cut(s)	548, 957
LmnI	GCTCC	4 cut(s)	294, 374, 1111, 1459
Lsp1109I	GCAGC	3 cut(s)	454, 941, 1437
LweI	GCATC	2 cut(s)	813, 1438
MabI	ACCWGGT	1 cut(s)	999
MaeI	CTAG	3 cut(s)	29, 795, 1085
MaeII	ACGT	4 cut(s)	453, 507, 774, 1038
MaeIII	GTNAC	2 cut(s)	202, 259
MbiI	CCGCTC	1 cut(s)	1462
MboII	GAAGA	8 cut(s)	112, 248, 329, 634, 832, 874, 974, 1288
MhlI	GDGCHC	5 cut(s)	291, 371, 1116, 1169, 1188
MlsI	TGGCCA	1 cut(s)	755
MluCI	AATT	6 cut(s)	161, 376, 385, 757, 1012, 1432
MluNI	TGGCCA	1 cut(s)	755
MlyI	GAGTC	7 cut(s)	233, 509, 650, 669, 803, 978, 1343
MmeI	TCCRAC	3 cut(s)	36, 1010, 1437
Mox20I	TGGCCA	1 cut(s)	755
MscI	TGGCCA	1 cut(s)	755
MseI	TTAA	1 cut(s)	801
Msp20I	TGGCCA	1 cut(s)	755
MspA1I	CMGCKG	1 cut(s)	478
MvaI	CCWGG	3 cut(s)	872, 1001, 1130
MvnI	CGCG	4 cut(s)	548, 550, 684, 1196
MwoI	GCNNNNNNNGC	9 cut(s)	427, 439, 475, 490, 571, 605, 720, 752, 915
NciI	CCSGG	9 cut(s)	265, 727, 1026, 1153, 1169, 1217, 1309, 1324, 1347
NcoI	CCATGG	2 cut(s)	600, 750
NlaIII	CATG	7 cut(s)	137, 505, 604, 754, 934, 976, 1192
NlaIV	GGNNCC	5 cut(s)	334, 370, 715, 724, 1082
NmeAIII	GCCGAG	6 cut(s)	657, 744, 913, 1198, 1236, 1317
NmuCI	GTSAC	2 cut(s)	202, 259
NruI	TCGCGA	1 cut(s)	1196
NspV	TTCGAA	1 cut(s)	1302
PagI	TCATGA	1 cut(s)	1188
PcsI	WCGNNNNNNNCGW	7 cut(s)	459, 462, 590, 771, 777, 989, 1338
PfeI	GAWTC	3 cut(s)	4, 184, 424
PflFI	GACNNNGTC	2 cut(s)	1001, 1026
PkrI	GCNGC	8 cut(s)	420, 432, 444, 495, 683, 748, 956, 1427
PleI	GAGTC	7 cut(s)	233, 509, 649, 669, 803, 977, 1342
PpsI	GAGTC	7 cut(s)	233, 509, 649, 669, 803, 977, 1342
PpuMI	RGGWCCY	1 cut(s)	868
PshAI	GACNNNNGTC	1 cut(s)	902
Psp124BI	GAGCTC	1 cut(s)	1188
Psp5II	RGGWCCY	1 cut(s)	868
Psp6I	CCWGG	3 cut(s)	870, 999, 1128
PspEI	GGTNACC	1 cut(s)	202
PspGI	CCWGG	3 cut(s)	870, 999, 1128
PspN4I	GGNNCC	5 cut(s)	334, 370, 715, 724, 1082
PspPI	GGNCC	6 cut(s)	333, 472, 558, 713, 868, 997
PspPPI	RGGWCCY	1 cut(s)	868
PsyI	GACNNNGTC	2 cut(s)	1001, 1026
RruI	TCGCGA	1 cut(s)	1196
RsaI	GTAC	4 cut(s)	74, 437, 500, 665
RsaNI	GTAC	4 cut(s)	73, 436, 499, 664
SacI	GAGCTC	1 cut(s)	1188
SalI	GTCGAC	2 cut(s)	509, 1004
SaqAI	TTAA	1 cut(s)	801
SatI	GCNGC	8 cut(s)	419, 431, 443, 494, 682, 747, 955, 1426
Sau96I	GGNCC	6 cut(s)	333, 472, 558, 713, 868, 997
ScaI	AGTACT	1 cut(s)	665
SchI	GAGTC	7 cut(s)	233, 509, 650, 669, 803, 978, 1343
SduI	GDGCHC	5 cut(s)	291, 371, 1116, 1169, 1188
SexAI	ACCWGGT	1 cut(s)	999
SfaNI	GCATC	2 cut(s)	813, 1438
SfuI	TTCGAA	1 cut(s)	1302
SgrDI	CGTCGACG	1 cut(s)	509
SinI	GGWCC	3 cut(s)	472, 868, 997
Sse9I	AATT	6 cut(s)	161, 376, 385, 757, 1012, 1432
SspMI	CTAG	3 cut(s)	29, 795, 1085
SstI	GAGCTC	1 cut(s)	1188
StyI	CCWWGG	3 cut(s)	336, 600, 750
TaaI	ACNGT	3 cut(s)	208, 1256, 1381
TaiI	ACGT	4 cut(s)	456, 510, 777, 1041
TaqII	GACCGA	1 cut(s)	1219
TasI	AATT	6 cut(s)	161, 376, 385, 757, 1012, 1432
TatI	WGTACW	3 cut(s)	72, 498, 663
TauI	GCSGC	5 cut(s)	421, 433, 496, 684, 749
TfiI	GAWTC	3 cut(s)	4, 184, 424
Tru1I	TTAA	1 cut(s)	801
Tru9I	TTAA	1 cut(s)	801
TseFI	GTSAC	2 cut(s)	202, 259
TseI	GCWGC	3 cut(s)	442, 954, 1425
Tsp45I	GTSAC	2 cut(s)	202, 259
TspDTI	ATGAA	3 cut(s)	518, 919, 1001
TspGWI	ACGGA	1 cut(s)	1044
Tth111I	GACNNNGTC	2 cut(s)	1001, 1026
VpaK11BI	GGWCC	3 cut(s)	472, 868, 997
XagI	CCTNNNNNAGG	1 cut(s)	863
XapI	RAATTY	4 cut(s)	161, 385, 1012, 1432
XmiI	GTMKAC	4 cut(s)	138, 510, 777, 1005
XspI	CTAG	3 cut(s)	29, 795, 1085
ZraI	GACGTC	2 cut(s)	775, 1039
ZrmI	AGTACT	1 cut(s)	665

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.