pycom02g11490

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0000659
Physical Location & Seq
Reverse (-)
8096518 .. 8099166
2649 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g11490.5

Sequence Viewer

Length: 1812 bp
ATGCACGTCTTTGCCTCAACGCGTGCATATAAATATTTGGCATCTTCGTGTTCATGCCTCATTACCTCTTCACGTAAACAATCAAGAAGTTGTGGATCAAAAGAGAGAATCGAAATGGCTAGCATCTGCCTCCGGAACAGGTTTCTGTGCGCGTTCGTGTTTATTTTCTTCGGGTTTCTTGGCTTAATCACTTCTCCTGCTGAAGCTGCCATCAAGAAATACCAGTTTGATGTCCAAGTGAAGAACGTGAGCAGATTGTGCCATGCAAAACCGATTGTTACTGTAAATGGAAGGTTTCCGGGACCTACGATCTATGTCCGAGAAGGTGACAGACTTCAAATCAATGTTACAAACCATGCTAAATACAACATGTCCATTCACTGGCATGGATTGAAGCAGTATCGAAACGGTTGGGCAGACGGACCGGCTTATGTGACGCAATGTCCGATCCAGACCGGAAGTAGCTACACTTACGACTTCAATGTGACAGGGCAAAGAGGAACTCTGTGGTGGCATGCACACATTCTTTGGCTAAGGGCTACTGTCTATGGAGCAATTGTGATCATGCCTAAACAAGGAACTCCATTCCCGTTCGCACAGCCGTACAGGGAAACTGAGATTATTCTCGGCGAATGGTGGAATGTCGACGTCGAAACCTTTGTCAACAAAGCAAACAGCTTGGGGTTGCCACCAGACTCGTCAGATGCTCACACCATCAACGGGAAGCCAGGGCCATTGTTTCCTTGCTCTGAGAAACATACTTTTGCAATGGAGGTTGAGCAAGGGAAGACCTATCTCCTCAGAATCATCAATGCCGCTCTCAACGACGAACTTTTCTTCGCCATTGCTGGACACAATCTGACAGTGGTGGAGGTTGATGCAGTTTACACCAAACCCTTCACTACTCAAGCCATACTAATCGCACCAGGCCAGACCACAAACGTTTTGGTCAAAGCCAATCAAGCTTCAGGCAGATACTTTATGGCCGCCAGACCTTTCATGGATGCTCCGGTTCCTGTTGACAACAAGACAGCCACAGCCATCTTCCAATACAGAGGAGTCCCGAACACCGTCCTGCCAAGCCTTCCGCAACTGCCTAACCCTAATGACACGTCCTTCGCTTTGAGTTACAATAAGAAGCTCAGAAGCCTGAACACTCCAAACTTTCCGGCCAATGTGCCTCTCAAAGTCGACCGGAAACTCTTCTACACCATTGGTTTCGGGAAAGAATCGTGCCCTAGTTGCATCAACGGAACAAGATTTGTTGCTTCCTTGAACAACATCTCTTTCGAGATGCCTCGGGTCGGGCTTCTGCAAGCACATTACTTCAACCTCAAAGGGGTGTTCAAAACCGACTTCCCCGATAGGCCTTCAACTGCATTCAACTACACTGGTGCACCACTCACAGCCAATCTTGGGACATCAACTGGAACTAGGCTGAGCAAGATTGCTTTCAATTCGACAGTTGAGCTGGTTTTACAAGACACGAATCTCCTAACCGTGGAGTCGCATCCGTTCCATCTCCACGGATACAACTTCTTTGTTGTTGGAACTGGGATTGGGAATTTTGATCCTGCCAAGGACCCTGCTAAGTACAACTTGGTTGATCCTGTTGAGAGAAATACAATTGGAGTTCCCACAGGTGGTTGGACCGCCATTCGGTTTAGAGCTGATAATCCAGGCGTTTGGTTCATGCACTGTCACTTGGAGCTTCATACTGGCTGGGGACTGAAAACAGCATTCGTTGTAGAAGATGGACCAGGATCGGATCAATCTGTTCTGCCTCCGCCTAAGGATCTTCCGCCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

604

Amino Acids

66.92

Weight (kDa)

9.08

Isoelectric Point (pI)

38.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000659)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03260
fragaria_vesca FvH4_1g13060 FvH4_2g08670 FvH4_2g08670 FvH4_2g08670 FvH4_2g08840 FvH4_2g08860 FvH4_2g09061
malus_domestica MD02G1145100.v1.1 MD05G1064600.v1.1 MD10G1073700.v1.1 MD15G1258600.v1.1 MD15G1259300.v1.1
prunus_persica Prupe.6G177700_v2.0.a1 Prupe.7G156500_v2.0.a1 Prupe.8G095000_v2.0.a1 Prupe.8G095400_v2.0.a1 Prupe.8G097000_v2.0.a1
pyrus_communis pycom02g11490 pycom05g05550 pycom15g22710
rosa_chinensis RchiOBHm_Chr2g0101231 RchiOBHm_Chr6g0264061 RchiOBHm_Chr6g0264101 RchiOBHm_Chr6g0264311 RchiOBHm_Chr6g0264361 RchiOBHm_Chr6g0264441 RchiOBHm_Chr6g0264891
rosa_laevigata RLG00000014229 RLG00000014253 RLG00000014265 RLG00000014267 RLG00000014269 RLG00000014291 RLG00000014292 RLG00000014316 RLG00000017063
rosa_multiflora Rmu_co8391921.1_g000001 Rmu_co8519839.1_g000001 Rmu_sc0000546.1_g000055 Rmu_sc0002305.1_g000003 Rmu_sc0004470.1_g000004 Rmu_sc0006314.1_g000014 Rmu_sc0009807.1_g000001 Rmu_sc0010483.1_g000004
rosa_roxburghii Rroxscaffold_175G00432050 Rroxscaffold_176G00431400 Rroxscaffold_176G00431740 Rroxscaffold_176G00431790 Rroxscaffold_7G00203140 Rroxscaffold_7G00203620
rosa_rugosa Rorug02G0100200 Rorug06G0007600 Rorug06G0012500 Rorug06G0012600 Rorug06G0014100
rosa_samantha Rh2BG150700 Rh2DG150800 Rh6AG128900 Rh6AG131700 Rh6BG124500 Rh6BG124800 Rh6BG128400 Rh6BG129400 Rh6BG132600 Rh6CG123100 Rh6DG110500 Rh6DG113900 Rh6DG114900 Rh6DG118200
rosa_wichuraiana Rw2G011330 Rw6G011140 Rw6G011160 Rw6G011480 Rw6G011540 Rw6G011680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 651
AccB7I CCANNNNNTGG 1 cut(s) 381
AccBSI CCGCTC 1 cut(s) 818
AccI GTMKAC 2 cut(s) 645, 1191
AccII CGCG 2 cut(s) 22, 152
AccIII TCCGGA 1 cut(s) 132
AciI CCGC 6 cut(s) 816, 987, 1088, 1653, 1787, 1802
AclI AACGTT 1 cut(s) 942
AclWI GGATC 7 cut(s) 103, 442, 1565, 1601, 1771, 1776, 1803
AcoI YGGCCR 2 cut(s) 984, 1170
AcsI RAATTY 1 cut(s) 1564
AcuI CTGAAG 2 cut(s) 222, 951
AcyI GRCGYC 1 cut(s) 648
AfaI GTAC 2 cut(s) 605, 1595
AfiI CCNNNNNNNGG 9 cut(s) 381, 575, 720, 1304, 1339, 1416, 1501, 1643, 1659
AflIII ACRYGT 3 cut(s) 20, 369, 1110
AgsI TTSAA 9 cut(s) 338, 394, 481, 1276, 1330, 1348, 1374, 1384, 1456
AhdI GACNNNNNGTC 1 cut(s) 441
AjiI CACGTC 2 cut(s) 7, 1113
AjnI CCWGG 4 cut(s) 727, 925, 1678, 1759
AluBI AGCT 8 cut(s) 206, 465, 678, 965, 1141, 1471, 1670, 1711
AluI AGCT 8 cut(s) 206, 465, 678, 965, 1141, 1471, 1670, 1711
Alw21I GWGCWC 1 cut(s) 1399
Alw44I GTGCAC 1 cut(s) 1395
AlwI GGATC 7 cut(s) 103, 442, 1565, 1601, 1771, 1776, 1803
Ama87I CYCGRG 1 cut(s) 1299
Aor13HI TCCGGA 1 cut(s) 132
AoxI GGCC 5 cut(s) 731, 928, 984, 1170, 1367
ApaLI GTGCAC 1 cut(s) 1395
ApeKI GCWGC 1 cut(s) 206
ApoI RAATTY 1 cut(s) 1564
ArsI GACNNNNNNTTYG 4 cut(s) 645, 677, 1100, 1132
Asp700I GAANNNNTTC 1 cut(s) 1202
AspLEI GCGC 1 cut(s) 152
AspS9I GGNCC 6 cut(s) 302, 422, 731, 1582, 1650, 1757
AsuC2I CCSGG 1 cut(s) 300
AsuHPI GGTGA 1 cut(s) 338
AsuNHI GCTAGC 1 cut(s) 119
AvaI CYCGRG 1 cut(s) 1299
AvaII GGWCC 5 cut(s) 302, 422, 1582, 1650, 1757
AxyI CCTNAGG 1 cut(s) 1791
BaeGI GKGCMC 2 cut(s) 1238, 1399
BbsI GAAGAC 1 cut(s) 794
Bbv12I GWGCWC 1 cut(s) 1399
BbvI GCAGC 1 cut(s) 193
BccI CCATC 5 cut(s) 218, 722, 1049, 1527, 1748
BceAI ACGGC 1 cut(s) 586
BciT130I CCWGG 4 cut(s) 729, 927, 1680, 1761
BciVI GTATCC 1 cut(s) 1523
BclI TGATCA 1 cut(s) 561
BcnI CCSGG 1 cut(s) 300
BfaI CTAG 3 cut(s) 120, 1239, 1434
BfuI GTATCC 1 cut(s) 1523
BisI GCNGC 3 cut(s) 207, 816, 987
BlpI GCTNAGC 1 cut(s) 1439
BlsI GCNGC 3 cut(s) 208, 817, 988
Bme1390I CCNGG 5 cut(s) 300, 729, 927, 1680, 1761
Bme18I GGWCC 5 cut(s) 302, 422, 1582, 1650, 1757
BmeRI GACNNNNNGTC 1 cut(s) 441
BmeT110I CYCGRG 1 cut(s) 1299
BmgBI CACGTC 2 cut(s) 7, 1113
BmgT120I GGNCC 6 cut(s) 302, 422, 731, 1582, 1650, 1757
BmiI GGNNCC 3 cut(s) 303, 1014, 1584
BmrFI CCNGG 5 cut(s) 300, 729, 927, 1680, 1761
BmrI ACTGGG 1 cut(s) 1563
BmsI GCATC 8 cut(s) 50, 132, 694, 868, 994, 1254, 1284, 1519
BmtI GCTAGC 1 cut(s) 123
BmuI ACTGGG 1 cut(s) 1563
BpiI GAAGAC 1 cut(s) 794
Bpu10I CCTNAGC 1 cut(s) 533
Bpu1102I GCTNAGC 1 cut(s) 1439
BpuEI CTTGAG 1 cut(s) 891
BpuMI CCSGG 1 cut(s) 300
BsaAI YACGTR 1 cut(s) 74
BsaHI GRCGYC 1 cut(s) 648
BsaJI CCNNGG 5 cut(s) 728, 1298, 1500, 1525, 1578
BsaWI WCCGGW 4 cut(s) 132, 455, 1009, 1194
BsaXI ACNNNNNCTCC 2 cut(s) 543, 573
Bsc4I CCNNNNNNNGG 9 cut(s) 381, 575, 720, 1304, 1339, 1416, 1501, 1643, 1659
Bse118I RCCGGY 1 cut(s) 424
Bse1I ACTGG 6 cut(s) 223, 386, 1396, 1432, 1558, 1723
Bse21I CCTNAGG 1 cut(s) 1791
Bse3DI GCAATG 3 cut(s) 446, 774, 843
BseAI TCCGGA 1 cut(s) 132
BseBI CCWGG 4 cut(s) 729, 927, 1680, 1761
BseDI CCNNGG 5 cut(s) 728, 1298, 1500, 1525, 1578
BseGI GGATG 2 cut(s) 1009, 1510
BseLI CCNNNNNNNGG 9 cut(s) 381, 575, 720, 1304, 1339, 1416, 1501, 1643, 1659
BseMI GCAATG 3 cut(s) 446, 774, 843
BseMII CTCAG 5 cut(s) 606, 741, 814, 1156, 1430
BseNI ACTGG 6 cut(s) 223, 386, 1396, 1432, 1558, 1723
BseRI GAGGAG 2 cut(s) 788, 1071
BseSI GKGCMC 2 cut(s) 1238, 1399
BseXI GCAGC 1 cut(s) 193
BseYI CCCAGC 1 cut(s) 1722
Bsh1236I CGCG 2 cut(s) 22, 152
Bsh1285I CGRYCG 1 cut(s) 1195
BshFI GGCC 5 cut(s) 733, 930, 986, 1172, 1369
BsiEI CGRYCG 1 cut(s) 1195
BsiHKAI GWGCWC 1 cut(s) 1399
BsiHKCI CYCGRG 1 cut(s) 1299
BsiSI CCGG 7 cut(s) 133, 299, 425, 456, 1010, 1169, 1195
BslFI GGGAC 4 cut(s) 315, 1046, 1432, 1740
BslI CCNNNNNNNGG 9 cut(s) 381, 575, 720, 1304, 1339, 1416, 1501, 1643, 1659
BsmFI GGGAC 4 cut(s) 315, 1046, 1432, 1740
BsmI GAATGC 2 cut(s) 1379, 1739
BsnI GGCC 5 cut(s) 733, 930, 986, 1172, 1369
BsoBI CYCGRG 1 cut(s) 1299
Bsp1286I GDGCHC 2 cut(s) 1238, 1399
Bsp13I TCCGGA 1 cut(s) 132
Bsp143I GATC 9 cut(s) 95, 309, 447, 561, 1570, 1606, 1763, 1768, 1795
Bsp1720I GCTNAGC 1 cut(s) 1439
BspACI CCGC 6 cut(s) 816, 987, 1088, 1653, 1787, 1802
BspANI GGCC 5 cut(s) 733, 930, 986, 1172, 1369
BspCNI CTCAG 5 cut(s) 607, 742, 813, 1155, 1431
BspEI TCCGGA 1 cut(s) 132
BspFNI CGCG 2 cut(s) 22, 152
BspLI GGNNCC 3 cut(s) 303, 1014, 1584
BspOI GCTAGC 1 cut(s) 123
BspPI GGATC 7 cut(s) 103, 442, 1565, 1601, 1771, 1776, 1803
BsrBI CCGCTC 1 cut(s) 818
BsrDI GCAATG 3 cut(s) 446, 774, 843
BsrFI RCCGGY 1 cut(s) 424
BsrI ACTGG 6 cut(s) 223, 386, 1396, 1432, 1558, 1723
BssAI RCCGGY 1 cut(s) 424
BssECI CCNNGG 5 cut(s) 728, 1298, 1500, 1525, 1578
BssMI GATC 9 cut(s) 95, 309, 447, 561, 1570, 1606, 1763, 1768, 1795
BssNI GRCGYC 1 cut(s) 648
BssT1I CCWWGG 1 cut(s) 1578
Bst2UI CCWGG 4 cut(s) 729, 927, 1680, 1761
Bst4CI ACNGT 8 cut(s) 283, 410, 544, 865, 1072, 1465, 1501, 1700
Bst6I CTCTTC 2 cut(s) 73, 1208
BstACI GRCGYC 1 cut(s) 648
BstAPI GCANNNNNTGC 1 cut(s) 258
BstBAI YACGTR 1 cut(s) 74
BstC8I GCNNGC 4 cut(s) 24, 121, 516, 1317
BstDEI CTNAG 8 cut(s) 533, 615, 750, 800, 1142, 1439, 1590, 1791
BstDSI CCRYGG 2 cut(s) 1500, 1525
BstENI CCTNNNNNAGG 1 cut(s) 573
BstF5I GGATG 2 cut(s) 1009, 1510
BstFNI CGCG 2 cut(s) 22, 152
BstHHI GCGC 1 cut(s) 152
BstKTI GATC 9 cut(s) 98, 312, 450, 564, 1573, 1609, 1766, 1771, 1798
BstMBI GATC 9 cut(s) 95, 309, 447, 561, 1570, 1606, 1763, 1768, 1795
BstMCI CGRYCG 1 cut(s) 1195
BstMWI GCNNNNNNNGC 4 cut(s) 206, 258, 962, 1242
BstNI CCWGG 4 cut(s) 729, 927, 1680, 1761
BstNSI RCATGY 2 cut(s) 373, 518
BstSCI CCNGG 5 cut(s) 298, 727, 925, 1678, 1759
BstSLI GKGCMC 2 cut(s) 1238, 1399
BstUI CGCG 2 cut(s) 22, 152
BstV1I GCAGC 1 cut(s) 193
BstV2I GAAGAC 1 cut(s) 794
BstX2I RGATCY 1 cut(s) 1795
BstXI CCANNNNNNTGG 1 cut(s) 1686
BstYI RGATCY 1 cut(s) 1795
Bsu36I CCTNAGG 1 cut(s) 1791
BsuI GTATCC 1 cut(s) 1523
BsuRI GGCC 5 cut(s) 733, 930, 986, 1172, 1369
BtgI CCRYGG 2 cut(s) 1500, 1525
BtrI CACGTC 2 cut(s) 7, 1113
BtsCI GGATG 2 cut(s) 1009, 1510
BtsIMutI CAGTG 4 cut(s) 379, 870, 1389, 1696
Cac8I GCNNGC 4 cut(s) 24, 121, 516, 1317
CfoI GCGC 1 cut(s) 152
Cfr10I RCCGGY 1 cut(s) 424
Cfr13I GGNCC 6 cut(s) 302, 422, 731, 1582, 1650, 1757
CpoI CGGWCCG 1 cut(s) 422
CseI GACGC 1 cut(s) 445
Csp6I GTAC 2 cut(s) 604, 1594
CspI CGGWCCG 1 cut(s) 422
CviAII CATG 9 cut(s) 54, 263, 356, 370, 386, 515, 565, 1000, 1693
CviQI GTAC 2 cut(s) 604, 1594
DdeI CTNAG 8 cut(s) 533, 615, 750, 800, 1142, 1439, 1590, 1791
DpnI GATC 9 cut(s) 97, 311, 449, 563, 1572, 1608, 1765, 1770, 1797
DpnII GATC 9 cut(s) 95, 309, 447, 561, 1570, 1606, 1763, 1768, 1795
DriI GACNNNNNGTC 1 cut(s) 441
EaeI YGGCCR 2 cut(s) 984, 1170
Eam1104I CTCTTC 2 cut(s) 73, 1208
Eam1105I GACNNNNNGTC 1 cut(s) 441
EarI CTCTTC 2 cut(s) 73, 1208
EciI GGCGGA 2 cut(s) 1776, 1791
Eco130I CCWWGG 1 cut(s) 1578
Eco147I AGGCCT 1 cut(s) 1369
Eco47I GGWCC 5 cut(s) 302, 422, 1582, 1650, 1757
Eco57I CTGAAG 2 cut(s) 222, 951
Eco81I CCTNAGG 1 cut(s) 1791
Eco88I CYCGRG 1 cut(s) 1299
EcoNI CCTNNNNNAGG 1 cut(s) 573
EcoO109I RGGNCCY 2 cut(s) 302, 1582
EcoRII CCWGG 4 cut(s) 727, 925, 1678, 1759
EcoT14I CCWWGG 1 cut(s) 1578
ErhI CCWWGG 1 cut(s) 1578
FaeI CATG 9 cut(s) 57, 266, 359, 373, 389, 518, 568, 1003, 1696
FalI AAGNNNNNCTT 2 cut(s) 1583, 1615
FaqI GGGAC 4 cut(s) 315, 1046, 1432, 1740
FatI CATG 9 cut(s) 53, 262, 355, 369, 385, 514, 564, 999, 1692
FbaI TGATCA 1 cut(s) 561
FblI GTMKAC 2 cut(s) 645, 1191
Fnu4HI GCNGC 3 cut(s) 207, 816, 987
FokI GGATG 2 cut(s) 1016, 1497
Fsp4HI GCNGC 3 cut(s) 207, 816, 987
FspBI CTAG 3 cut(s) 120, 1239, 1434
GlaI GCGC 1 cut(s) 151
GluI GCNGC 3 cut(s) 207, 816, 987
GsaI CCCAGC 1 cut(s) 1726
HaeIII GGCC 5 cut(s) 733, 930, 986, 1172, 1369
HapII CCGG 7 cut(s) 133, 299, 425, 456, 1010, 1169, 1195
HgaI GACGC 1 cut(s) 445
HhaI GCGC 1 cut(s) 152
Hin1I GRCGYC 1 cut(s) 648
Hin1II CATG 9 cut(s) 57, 266, 359, 373, 389, 518, 568, 1003, 1696
Hin6I GCGC 1 cut(s) 150
HinP1I GCGC 1 cut(s) 150
HincII GTYRAC 4 cut(s) 646, 664, 1021, 1192
HindII GTYRAC 4 cut(s) 646, 664, 1021, 1192
HindIII AAGCTT 1 cut(s) 963
HinfI GANTC 7 cut(s) 108, 695, 804, 1059, 1229, 1489, 1505
HpaII CCGG 7 cut(s) 133, 299, 425, 456, 1010, 1169, 1195
HphI GGTGA 1 cut(s) 338
Hpy166II GTNNAC 7 cut(s) 77, 646, 664, 886, 1021, 1192, 1397
Hpy188I TCNGA 8 cut(s) 320, 447, 703, 751, 803, 861, 1145, 1768
Hpy188III TCNNGA 7 cut(s) 84, 133, 214, 451, 1063, 1222, 1291
Hpy8I GTNNAC 7 cut(s) 77, 646, 664, 886, 1021, 1192, 1397
Hpy99I CGWCG 3 cut(s) 650, 653, 830
HpyAV CCTTC 6 cut(s) 285, 317, 907, 1094, 1126, 1380
HpyCH4III ACNGT 8 cut(s) 283, 410, 544, 865, 1072, 1465, 1501, 1700
HpyCH4IV ACGT 6 cut(s) 6, 73, 246, 648, 942, 1112
HpyF10VI GCNNNNNNNGC 4 cut(s) 206, 258, 962, 1242
HpyF3I CTNAG 8 cut(s) 533, 615, 750, 800, 1142, 1439, 1590, 1791
HpySE526I ACGT 6 cut(s) 6, 73, 246, 648, 942, 1112
Hsp92I GRCGYC 1 cut(s) 648
Hsp92II CATG 9 cut(s) 57, 266, 359, 373, 389, 518, 568, 1003, 1696
HspAI GCGC 1 cut(s) 150
Kpn2I TCCGGA 1 cut(s) 132
Ksp22I TGATCA 1 cut(s) 561
Kzo9I GATC 9 cut(s) 95, 309, 447, 561, 1570, 1606, 1763, 1768, 1795
LmnI GCTCC 3 cut(s) 551, 1012, 1708
Lsp1109I GCAGC 1 cut(s) 193
LweI GCATC 8 cut(s) 50, 132, 694, 868, 994, 1254, 1284, 1519
MaeI CTAG 3 cut(s) 120, 1239, 1434
MaeII ACGT 6 cut(s) 6, 73, 246, 648, 942, 1112
MaeIII GTNAC 7 cut(s) 277, 326, 346, 433, 484, 1127, 1700
MalI GATC 9 cut(s) 97, 311, 449, 563, 1572, 1608, 1765, 1770, 1797
MbiI CCGCTC 1 cut(s) 818
MboI GATC 9 cut(s) 95, 309, 447, 561, 1570, 1606, 1763, 1768, 1795
MfeI CAATTG 2 cut(s) 555, 1626
MflI RGATCY 1 cut(s) 1795
MhlI GDGCHC 2 cut(s) 1238, 1399
MluCI AATT 4 cut(s) 555, 1456, 1564, 1626
MluI ACGCGT 1 cut(s) 20
MlyI GAGTC 3 cut(s) 689, 1068, 1514
MmeI TCCRAC 2 cut(s) 1528, 1628
MroI TCCGGA 1 cut(s) 132
MroXI GAANNNNTTC 1 cut(s) 1202
MseI TTAA 1 cut(s) 185
MslI CAYNNNNRTG 2 cut(s) 46, 384
MspI CCGG 7 cut(s) 133, 299, 425, 456, 1010, 1169, 1195
MspR9I CCNGG 5 cut(s) 300, 729, 927, 1680, 1761
MunI CAATTG 2 cut(s) 555, 1626
Mva1269I GAATGC 2 cut(s) 1379, 1739
MvaI CCWGG 4 cut(s) 729, 927, 1680, 1761
MvnI CGCG 2 cut(s) 22, 152
MwoI GCNNNNNNNGC 4 cut(s) 206, 258, 962, 1242
NciI CCSGG 1 cut(s) 300
NdeII GATC 9 cut(s) 95, 309, 447, 561, 1570, 1606, 1763, 1768, 1795
NheI GCTAGC 1 cut(s) 119
NlaIII CATG 9 cut(s) 57, 266, 359, 373, 389, 518, 568, 1003, 1696
NlaIV GGNNCC 3 cut(s) 303, 1014, 1584
NmeAIII GCCGAG 1 cut(s) 606
NmuCI GTSAC 4 cut(s) 326, 433, 484, 1700
NspI RCATGY 2 cut(s) 373, 518
PaeI GCATGC 1 cut(s) 518
PceI AGGCCT 1 cut(s) 1369
PciI ACATGT 1 cut(s) 369
PcsI WCGNNNNNNNCGW 1 cut(s) 443
PctI GAATGC 2 cut(s) 1379, 1739
PdmI GAANNNNTTC 1 cut(s) 1202
PfeI GAWTC 4 cut(s) 108, 804, 1229, 1489
PflMI CCANNNNNTGG 1 cut(s) 381
PfoI TCCNGGA 1 cut(s) 298
PkrI GCNGC 3 cut(s) 208, 817, 988
PleI GAGTC 3 cut(s) 689, 1067, 1513
PpsI GAGTC 3 cut(s) 689, 1067, 1513
Ppu21I YACGTR 1 cut(s) 74
PpuMI RGGWCCY 2 cut(s) 302, 1582
PscI ACATGT 1 cut(s) 369
Psp1406I AACGTT 1 cut(s) 942
Psp5II RGGWCCY 2 cut(s) 302, 1582
Psp6I CCWGG 4 cut(s) 727, 925, 1678, 1759
PspFI CCCAGC 1 cut(s) 1722
PspGI CCWGG 4 cut(s) 727, 925, 1678, 1759
PspN4I GGNNCC 3 cut(s) 303, 1014, 1584
PspPI GGNCC 6 cut(s) 302, 422, 731, 1582, 1650, 1757
PspPPI RGGWCCY 2 cut(s) 302, 1582
PsuI RGATCY 1 cut(s) 1795
RsaI GTAC 2 cut(s) 605, 1595
RsaNI GTAC 2 cut(s) 604, 1594
RseI CAYNNNNRTG 2 cut(s) 46, 384
Rsr2I CGGWCCG 1 cut(s) 422
RsrII CGGWCCG 1 cut(s) 422
SalI GTCGAC 2 cut(s) 644, 1190
SaqAI TTAA 1 cut(s) 185
SatI GCNGC 3 cut(s) 207, 816, 987
Sau3AI GATC 9 cut(s) 95, 309, 447, 561, 1570, 1606, 1763, 1768, 1795
Sau96I GGNCC 6 cut(s) 302, 422, 731, 1582, 1650, 1757
SchI GAGTC 3 cut(s) 689, 1068, 1514
ScrFI CCNGG 5 cut(s) 300, 729, 927, 1680, 1761
SduI GDGCHC 2 cut(s) 1238, 1399
SfaNI GCATC 8 cut(s) 50, 132, 694, 868, 994, 1254, 1284, 1519
SinI GGWCC 5 cut(s) 302, 422, 1582, 1650, 1757
SmiMI CAYNNNNRTG 2 cut(s) 46, 384
SmlI CTYRAG 1 cut(s) 906
SmoI CTYRAG 1 cut(s) 906
SphI GCATGC 1 cut(s) 518
Sse9I AATT 4 cut(s) 555, 1456, 1564, 1626
SseBI AGGCCT 1 cut(s) 1369
SsiI CCGC 6 cut(s) 816, 987, 1088, 1653, 1787, 1802
SspI AATATT 1 cut(s) 35
SspMI CTAG 3 cut(s) 120, 1239, 1434
StuI AGGCCT 1 cut(s) 1369
StyD4I CCNGG 5 cut(s) 298, 727, 925, 1678, 1759
StyI CCWWGG 1 cut(s) 1578
TaaI ACNGT 8 cut(s) 283, 410, 544, 865, 1072, 1465, 1501, 1700
TaiI ACGT 6 cut(s) 9, 76, 249, 651, 945, 1115
TaqI TCGA 7 cut(s) 111, 403, 645, 651, 1191, 1290, 1460
TasI AATT 4 cut(s) 555, 1456, 1564, 1626
TatI WGTACW 1 cut(s) 1593
TauI GCSGC 2 cut(s) 818, 989
TfiI GAWTC 4 cut(s) 108, 804, 1229, 1489
Tru1I TTAA 1 cut(s) 185
Tru9I TTAA 1 cut(s) 185
TscAI CASTG 4 cut(s) 386, 870, 1396, 1703
TseFI GTSAC 4 cut(s) 326, 433, 484, 1700
TseI GCWGC 1 cut(s) 206
Tsp45I GTSAC 4 cut(s) 326, 433, 484, 1700
TspDTI ATGAA 4 cut(s) 42, 988, 1681, 1703
TspGWI ACGGA 4 cut(s) 435, 1266, 1503, 1542
TspRI CASTG 4 cut(s) 386, 870, 1396, 1703
Van91I CCANNNNNTGG 1 cut(s) 381
VneI GTGCAC 1 cut(s) 1395
VpaK11BI GGWCC 5 cut(s) 302, 422, 1582, 1650, 1757
XagI CCTNNNNNAGG 1 cut(s) 573
XapI RAATTY 1 cut(s) 1564
XceI RCATGY 2 cut(s) 373, 518
XcmI CCANNNNNNNNNTGG 2 cut(s) 943, 997
XmiI GTMKAC 2 cut(s) 645, 1191
XmnI GAANNNNTTC 1 cut(s) 1202
XspI CTAG 3 cut(s) 120, 1239, 1434
ZraI GACGTC 1 cut(s) 649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.