Rorug06G0012500

Belongs to the multicopper oxidase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
1649103 .. 1653110
4008 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0012500.1

Sequence Viewer

Length: 2277 bp
ATGGCAGAACAGAAGGGAATGGCCCCCAAACTCAGAGGGATGGTACCCAAAACAGATAATCTCCTCCTAAAGATTGAGATCCTTGCAATTCTTCTTCTGGTAATCGTTCCCAATTTTACAAGGGAATCCATCATCGATTTCACTCGGTCAAGTTTTCTATCCTTAGGGATATCCTGCTATCGTCAACTTATTGGTACTACATCAACTTTACCAACATATTATCTCTGGATATTTTGGTTGGAGCGAGCTGTGAGCCTTTACCTCCTAATACTTTACCACAGAGCTACAAAATTTTGGGGTATAGCTTTTGGCTTCTACTTGATGTCCACCATATGCAGTTCTTCCATTGTATACTTCATGCCTACAAGAAAATGGCAAGGACTTCAGAAAAACCCTAGCCCTAGAAAAACTAACAAGGGAGAGGTTTTGGTTAAAAAGGTTGATATATTAGAAAGACTGATGTTCTGGCTGGAGCGGCTCGTGGGCGTAGTATGCATCTTTTTGATATCCAGATTTGCTCGTTTCTCTACTGTATTCTTCTGTTTTTCTGATTTCATCTACTTGATTTGCTTTGCTCTGCGGTTAGAGGTCAATCCTTTGCCAGTGAAGCCTGACTATCTGTTCTGGATTGAGCGACTTGCAATAATGATTTTGGAACTCGACTGTACTGACCAAACTCCAAACAGTTTGTTCATAGCCAGGGGTCTCTTTTTTCTTACCAACAGTTGTTACAGTGTTGACTCCTATACACCAGCATTTATGAATAAGGGTCTCATATCTAAAGCTTACGCTCCTAAACTCAGAGAAGTTGAAAAGGGTTTAAAAGCAGAGAAAAAGAAAGCCAAAATTGAGGATGAGCCACAAATAGGGAAGTTTGAAGTTCATCAAGGAGATCATAACAATTGGGAAAAGGAATTGGTGGCTAAATATAGGTTTATGGATCATATATCAGAGTCCACATGTACCAAAATTGAGGATGAGTCGCCAAAACAAAAGTTGGAAGACACTGCCAAGTATGAAAATGAAGAAGAACCATCAAAAGATGAAAGATACCATTGGGAAGAGGAATTGGATGGGTTTATGGAGGAGCATGTATCGGGATTCACGTGCATCAAACCTAAGGAGACTAAGAAATCTGAAATTGAAGAAGAGGCACCAATAGAAGAGAATTACAGATGGCCAAGGGAAGAGGATTTGGAAGTTGTAGAAGCACTGAAAGAAGAAAACAACAAATCATTGGGTGAGGGCAACGCACGATGTTACAAATGGAAATGGTCTGATGATATGTCATCAGATCTTCCAAGTCCTTGGGATTATTTTGCTACATATAAAGACATGGATAAAGTTGATGATAACTGGGGAAAACAATTGGTGATGGCAGATCAAATTGATACTGTCAATGGCAATGGTAGCAGTGATCCGATGGAGACCACAACAGCTGAATATGAAAGCAATAAGGAACCACTTCTTCTTGAGGACACTGGAGAAGTTGAGAGACTGAGAGCTGAAAATGATAATTTGAAGAGAGAAAAGGAAGCATTGGAGAGCGAAAAGGAAGCATTGGAGAGAGAAAAGGAAGCATTAGAGGATACATTGAAGGCAGAGATACTTAAACATGAAGATACTCTCCTCGAGTGGAAAATGCACGATCAGAAGCTTGATGCAATGCTTGTTGAAGCGAAGATGAAGTCTCAAGCTTTAGTTGAGGAGTTAGATTCTCACTCCAAGTTTGAGGAACAAATGCTGGAAACGCTTAAAGCTTACAAAAAAGATTGCAGAAAATGGGAGCAAGACAATAAAGACATTGGTGCAAAATTTGAAGCTGTAATTTCAGCTATTAGAAAAGATCAGCAGACTTTGCTAACTGGTCAAGGACATGTTTGCAAGTGCAAGGCAGAACGCAAGAAATGGGAAAACGAGAAAATCACACTCAATGAACAGCTTGAGGCAGTGAATTCTTGGTACGAGTTCTATTTTGAAGTGGCAACGACAGCAAACTATTGGAATCAATACTATATGCAAAGGGAAAATTATTACAGTATTTGGTTGCGTTACTATGAGGACAACATCTACAGCCTTGTCAAAAGTAACAGTGACCTTGCTAAAAGGCTCGAGGTAGAAACTAGTTTGTCCACTAGTTATCACAATCATGTTTTTGACTATGAAGAGAGATGCAGGGCGCTCGAGGAAGACAAGAACAATCTCACTGCAAAGCTTTGTGCTGCCAATGCCTCATCTGAACTATATCGAAGCATGTTACGTGACTTGGCCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

758

Amino Acids

88.89

Weight (kDa)

5.11

Isoelectric Point (pI)

43.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000659)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03260
fragaria_vesca FvH4_1g13060 FvH4_2g08670 FvH4_2g08670 FvH4_2g08670 FvH4_2g08840 FvH4_2g08860 FvH4_2g09061
malus_domestica MD02G1145100.v1.1 MD05G1064600.v1.1 MD10G1073700.v1.1 MD15G1258600.v1.1 MD15G1259300.v1.1
prunus_persica Prupe.6G177700_v2.0.a1 Prupe.7G156500_v2.0.a1 Prupe.8G095000_v2.0.a1 Prupe.8G095400_v2.0.a1 Prupe.8G097000_v2.0.a1
pyrus_communis pycom02g11490 pycom05g05550 pycom15g22710
rosa_chinensis RchiOBHm_Chr2g0101231 RchiOBHm_Chr6g0264061 RchiOBHm_Chr6g0264101 RchiOBHm_Chr6g0264311 RchiOBHm_Chr6g0264361 RchiOBHm_Chr6g0264441 RchiOBHm_Chr6g0264891
rosa_laevigata RLG00000014229 RLG00000014253 RLG00000014265 RLG00000014267 RLG00000014269 RLG00000014291 RLG00000014292 RLG00000014316 RLG00000017063
rosa_multiflora Rmu_co8391921.1_g000001 Rmu_co8519839.1_g000001 Rmu_sc0000546.1_g000055 Rmu_sc0002305.1_g000003 Rmu_sc0004470.1_g000004 Rmu_sc0006314.1_g000014 Rmu_sc0009807.1_g000001 Rmu_sc0010483.1_g000004
rosa_roxburghii Rroxscaffold_175G00432050 Rroxscaffold_176G00431400 Rroxscaffold_176G00431740 Rroxscaffold_176G00431790 Rroxscaffold_7G00203140 Rroxscaffold_7G00203620
rosa_rugosa Rorug02G0100200 Rorug06G0007600 Rorug06G0012500 Rorug06G0012600 Rorug06G0014100
rosa_samantha Rh2BG150700 Rh2DG150800 Rh6AG128900 Rh6AG131700 Rh6BG124500 Rh6BG124800 Rh6BG128400 Rh6BG129400 Rh6BG132600 Rh6CG123100 Rh6DG110500 Rh6DG113900 Rh6DG114900 Rh6DG118200
rosa_wichuraiana Rw2G011330 Rw6G011140 Rw6G011160 Rw6G011480 Rw6G011540 Rw6G011680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 43
AccB1I GGYRCC 2 cut(s) 43, 1153
AccBSI CCGCTC 1 cut(s) 475
AccI GTMKAC 1 cut(s) 351
AciI CCGC 2 cut(s) 475, 580
AclWI GGATC 3 cut(s) 73, 948, 1412
AcoI YGGCCR 2 cut(s) 1178, 2268
AcsI RAATTY 3 cut(s) 290, 1814, 1954
AcuI CTGAAG 1 cut(s) 368
AcvI CACGTG 1 cut(s) 1107
AfaI GTAC 5 cut(s) 45, 196, 667, 964, 1964
AfiI CCNNNNNNNGG 1 cut(s) 866
AflIII ACRYGT 2 cut(s) 959, 1876
AgsI TTSAA 8 cut(s) 812, 878, 1145, 1522, 1597, 1676, 1820, 1979
AhlI ACTAGT 2 cut(s) 2123, 2135
AjnI CCWGG 1 cut(s) 698
Alw26I GTCTC 6 cut(s) 710, 776, 1118, 1421, 1489, 1695
AlwI GGATC 3 cut(s) 73, 948, 1412
Ama87I CYCGRG 3 cut(s) 1631, 2111, 2183
AoxI GGCC 3 cut(s) 21, 1178, 2268
ApeKI GCWGC 1 cut(s) 2222
ApoI RAATTY 3 cut(s) 290, 1814, 1954
ArsI GACNNNNNNTTYG 2 cut(s) 1673, 1705
Asp700I GAANNNNTTC 1 cut(s) 1464
Asp718I GGTACC 1 cut(s) 43
AspLEI GCGC 1 cut(s) 2182
AspS9I GGNCC 1 cut(s) 22
AsuHPI GGTGA 2 cut(s) 1253, 1384
AvaI CYCGRG 3 cut(s) 1631, 2111, 2183
AxyI CCTNAGG 2 cut(s) 163, 1119
BalI TGGCCA 2 cut(s) 1180, 2270
BanI GGYRCC 2 cut(s) 43, 1153
BauI CACGAG 1 cut(s) 479
BbrPI CACGTG 1 cut(s) 1107
BbsI GAAGAC 2 cut(s) 1008, 2196
BbvI GCAGC 1 cut(s) 2209
BccI CCATC 7 cut(s) 34, 137, 1042, 1067, 1170, 1369, 1417
BcgI CGANNNNNNTGC 2 cut(s) 2164, 2198
BciT130I CCWGG 1 cut(s) 700
BciVI GTATCC 1 cut(s) 1582
BcoDI GTCTC 6 cut(s) 710, 776, 1118, 1421, 1489, 1695
BcuI ACTAGT 2 cut(s) 2123, 2135
BfaI CTAG 4 cut(s) 396, 402, 2124, 2136
BfmI CTRYAG 1 cut(s) 2071
BfoI RGCGCY 1 cut(s) 2183
BfuI GTATCC 1 cut(s) 1582
BglII AGATCT 1 cut(s) 1294
BisI GCNGC 2 cut(s) 476, 2223
BlsI GCNGC 2 cut(s) 477, 2224
Bme1390I CCNGG 1 cut(s) 700
BmeT110I CYCGRG 3 cut(s) 1631, 2111, 2183
BmgT120I GGNCC 1 cut(s) 22
BmiI GGNNCC 4 cut(s) 24, 45, 1155, 1461
BmrFI CCNGG 1 cut(s) 700
BmrI ACTGGG 1 cut(s) 1366
BmsI GCATC 4 cut(s) 504, 1119, 1651, 2162
BmuI ACTGGG 1 cut(s) 1366
BpiI GAAGAC 2 cut(s) 1008, 2196
BpmI CTGGAG 2 cut(s) 491, 1503
BpuEI CTTGAG 3 cut(s) 1493, 1677, 1964
Bsa29I ATCGAT 1 cut(s) 135
BsaAI YACGTR 2 cut(s) 1107, 2261
BsaBI GATNNNNATC 1 cut(s) 77
BsaI GGTCTC 3 cut(s) 710, 776, 1421
BsaJI CCNNGG 3 cut(s) 699, 1181, 1307
Bsc4I CCNNNNNNNGG 1 cut(s) 866
Bse1I ACTGG 4 cut(s) 602, 1361, 1486, 1870
Bse21I CCTNAGG 2 cut(s) 163, 1119
Bse3DI GCAATG 2 cut(s) 1411, 1671
Bse8I GATNNNNATC 1 cut(s) 77
BseBI CCWGG 1 cut(s) 700
BseCI ATCGAT 1 cut(s) 135
BseDI CCNNGG 3 cut(s) 699, 1181, 1307
BseGI GGATG 4 cut(s) 45, 859, 982, 1078
BseJI GATNNNNATC 1 cut(s) 77
BseLI CCNNNNNNNGG 1 cut(s) 866
BseMI GCAATG 2 cut(s) 1411, 1671
BseMII CTCAG 3 cut(s) 46, 814, 1490
BseNI ACTGG 4 cut(s) 602, 1361, 1486, 1870
BseRI GAGGAG 4 cut(s) 53, 1100, 1619, 1721
BseXI GCAGC 1 cut(s) 2209
BshFI GGCC 3 cut(s) 23, 1180, 2270
BshNI GGYRCC 2 cut(s) 43, 1153
BshVI ATCGAT 1 cut(s) 135
BsiHKCI CYCGRG 3 cut(s) 1631, 2111, 2183
BslI CCNNNNNNNGG 1 cut(s) 866
BsmAI GTCTC 6 cut(s) 710, 776, 1118, 1421, 1489, 1695
BsnI GGCC 3 cut(s) 23, 1180, 2270
Bso31I GGTCTC 3 cut(s) 710, 776, 1421
BsoBI CYCGRG 3 cut(s) 1631, 2111, 2183
Bsp143I GATC 8 cut(s) 78, 892, 940, 1294, 1381, 1417, 1648, 1846
BspACI CCGC 2 cut(s) 475, 580
BspANI GGCC 3 cut(s) 23, 1180, 2270
BspCNI CTCAG 3 cut(s) 45, 813, 1491
BspDI ATCGAT 1 cut(s) 135
BspLI GGNNCC 4 cut(s) 24, 45, 1155, 1461
BspPI GGATC 3 cut(s) 73, 948, 1412
BspT107I GGYRCC 2 cut(s) 43, 1153
BspTNI GGTCTC 3 cut(s) 710, 776, 1421
BsrBI CCGCTC 1 cut(s) 475
BsrDI GCAATG 2 cut(s) 1411, 1671
BsrI ACTGG 4 cut(s) 602, 1361, 1486, 1870
BssECI CCNNGG 3 cut(s) 699, 1181, 1307
BssMI GATC 8 cut(s) 78, 892, 940, 1294, 1381, 1417, 1648, 1846
BssNAI GTATAC 1 cut(s) 352
BssSI CACGAG 1 cut(s) 479
BssT1I CCWWGG 2 cut(s) 1181, 1307
Bst1107I GTATAC 1 cut(s) 352
Bst2BI CACGAG 1 cut(s) 479
Bst2UI CCWGG 1 cut(s) 700
Bst4CI ACNGT 8 cut(s) 532, 665, 686, 725, 734, 1396, 2039, 2093
Bst6I CTCTTC 6 cut(s) 1056, 1143, 1158, 1182, 1517, 2160
BstAPI GCANNNNNTGC 1 cut(s) 1858
BstBAI YACGTR 2 cut(s) 1107, 2261
BstC8I GCNNGC 1 cut(s) 246
BstDEI CTNAG 7 cut(s) 32, 163, 800, 1119, 1128, 1499, 2274
BstF5I GGATG 4 cut(s) 45, 859, 982, 1078
BstH2I RGCGCY 1 cut(s) 2183
BstHHI GCGC 1 cut(s) 2182
BstKTI GATC 8 cut(s) 81, 895, 943, 1297, 1384, 1420, 1651, 1849
BstMAI GTCTC 6 cut(s) 710, 776, 1118, 1421, 1489, 1695
BstMBI GATC 8 cut(s) 78, 892, 940, 1294, 1381, 1417, 1648, 1846
BstMWI GCNNNNNNNGC 8 cut(s) 475, 492, 607, 1410, 1750, 1858, 1991, 2228
BstNI CCWGG 1 cut(s) 700
BstNSI RCATGY 4 cut(s) 963, 1094, 1880, 2257
BstSCI CCNGG 1 cut(s) 698
BstSFI CTRYAG 1 cut(s) 2071
BstV1I GCAGC 1 cut(s) 2209
BstV2I GAAGAC 2 cut(s) 1008, 2196
BstX2I RGATCY 2 cut(s) 78, 1294
BstXI CCANNNNNNTGG 1 cut(s) 1308
BstYI RGATCY 2 cut(s) 78, 1294
BstZ17I GTATAC 1 cut(s) 352
Bsu15I ATCGAT 1 cut(s) 135
Bsu36I CCTNAGG 2 cut(s) 163, 1119
BsuI GTATCC 1 cut(s) 1582
BsuRI GGCC 3 cut(s) 23, 1180, 2270
BsuTUI ATCGAT 1 cut(s) 135
BtsCI GGATG 4 cut(s) 45, 859, 982, 1078
BtsI GCAGTG 4 cut(s) 1005, 1420, 1956, 2205
BtsIMutI CAGTG 9 cut(s) 609, 739, 1005, 1211, 1420, 1479, 1956, 2098, 2205
Cac8I GCNNGC 1 cut(s) 246
CfoI GCGC 1 cut(s) 2182
Cfr13I GGNCC 1 cut(s) 22
ClaI ATCGAT 1 cut(s) 135
Csp6I GTAC 5 cut(s) 44, 195, 666, 963, 1963
CviAII CATG 8 cut(s) 358, 960, 1091, 1336, 1616, 1877, 2150, 2254
CviQI GTAC 5 cut(s) 44, 195, 666, 963, 1963
DdeI CTNAG 7 cut(s) 32, 163, 800, 1119, 1128, 1499, 2274
DpnI GATC 8 cut(s) 80, 894, 942, 1296, 1383, 1419, 1650, 1848
DpnII GATC 8 cut(s) 78, 892, 940, 1294, 1381, 1417, 1648, 1846
DraI TTTAAA 1 cut(s) 822
EaeI YGGCCR 2 cut(s) 1178, 2268
Eam1104I CTCTTC 6 cut(s) 1056, 1143, 1158, 1182, 1517, 2160
EarI CTCTTC 6 cut(s) 1056, 1143, 1158, 1182, 1517, 2160
Eco130I CCWWGG 2 cut(s) 1181, 1307
Eco31I GGTCTC 3 cut(s) 710, 776, 1421
Eco32I GATATC 2 cut(s) 171, 507
Eco57I CTGAAG 1 cut(s) 368
Eco72I CACGTG 1 cut(s) 1107
Eco81I CCTNAGG 2 cut(s) 163, 1119
Eco88I CYCGRG 3 cut(s) 1631, 2111, 2183
EcoRI GAATTC 1 cut(s) 1954
EcoRII CCWGG 1 cut(s) 698
EcoRV GATATC 2 cut(s) 171, 507
EcoT14I CCWWGG 2 cut(s) 1181, 1307
EcoT22I ATGCAT 1 cut(s) 497
ErhI CCWWGG 2 cut(s) 1181, 1307
FaeI CATG 8 cut(s) 361, 963, 1094, 1339, 1619, 1880, 2153, 2257
FatI CATG 8 cut(s) 357, 959, 1090, 1335, 1615, 1876, 2149, 2253
FauNDI CATATG 1 cut(s) 332
FblI GTMKAC 1 cut(s) 351
Fnu4HI GCNGC 2 cut(s) 476, 2223
FokI GGATG 4 cut(s) 52, 866, 989, 1085
Fsp4HI GCNGC 2 cut(s) 476, 2223
FspBI CTAG 4 cut(s) 396, 402, 2124, 2136
GlaI GCGC 1 cut(s) 2181
GluI GCNGC 2 cut(s) 476, 2223
GsuI CTGGAG 2 cut(s) 491, 1503
HaeII RGCGCY 1 cut(s) 2183
HaeIII GGCC 3 cut(s) 23, 1180, 2270
HhaI GCGC 1 cut(s) 2182
Hin1II CATG 8 cut(s) 361, 963, 1094, 1339, 1619, 1880, 2153, 2257
Hin6I GCGC 1 cut(s) 2180
HinP1I GCGC 1 cut(s) 2180
HincII GTYRAC 2 cut(s) 185, 739
HindII GTYRAC 2 cut(s) 185, 739
HindIII AAGCTT 5 cut(s) 783, 1655, 1695, 1758, 2213
HinfI GANTC 7 cut(s) 125, 740, 953, 980, 1101, 1715, 2005
HphI GGTGA 2 cut(s) 1253, 1384
Hpy166II GTNNAC 6 cut(s) 185, 327, 352, 739, 957, 2133
Hpy188III TCNNGA 5 cut(s) 226, 510, 625, 1098, 1472
Hpy8I GTNNAC 6 cut(s) 185, 327, 352, 739, 957, 2133
HpyAV CCTTC 2 cut(s) 7, 1591
HpyCH4III ACNGT 8 cut(s) 532, 665, 686, 725, 734, 1396, 2039, 2093
HpyCH4IV ACGT 2 cut(s) 1106, 2260
HpyF10VI GCNNNNNNNGC 8 cut(s) 475, 492, 607, 1410, 1750, 1858, 1991, 2228
HpyF3I CTNAG 7 cut(s) 32, 163, 800, 1119, 1128, 1499, 2274
HpySE526I ACGT 2 cut(s) 1106, 2260
Hsp92II CATG 8 cut(s) 361, 963, 1094, 1339, 1619, 1880, 2153, 2257
HspAI GCGC 1 cut(s) 2180
KpnI GGTACC 1 cut(s) 47
Kzo9I GATC 8 cut(s) 78, 892, 940, 1294, 1381, 1417, 1648, 1846
LmnI GCTCC 5 cut(s) 241, 472, 796, 1087, 1786
Lsp1109I GCAGC 1 cut(s) 2209
LweI GCATC 4 cut(s) 504, 1119, 1651, 2162
MaeI CTAG 4 cut(s) 396, 402, 2124, 2136
MaeII ACGT 2 cut(s) 1106, 2260
MaeIII GTNAC 7 cut(s) 728, 1259, 2051, 2087, 2093, 2256, 2261
MalI GATC 8 cut(s) 80, 894, 942, 1296, 1383, 1419, 1650, 1848
MbiI CCGCTC 1 cut(s) 475
MboI GATC 8 cut(s) 78, 892, 940, 1294, 1381, 1417, 1648, 1846
MfeI CAATTG 2 cut(s) 901, 1367
MflI RGATCY 2 cut(s) 78, 1294
MlsI TGGCCA 2 cut(s) 1180, 2270
MluNI TGGCCA 2 cut(s) 1180, 2270
MlyI GAGTC 3 cut(s) 734, 962, 989
MmeI TCCRAC 2 cut(s) 219, 978
Mox20I TGGCCA 2 cut(s) 1180, 2270
Mph1103I ATGCAT 1 cut(s) 497
MroXI GAANNNNTTC 1 cut(s) 1464
MscI TGGCCA 2 cut(s) 1180, 2270
MseI TTAA 4 cut(s) 432, 821, 1611, 1755
MslI CAYNNNNRTG 1 cut(s) 2148
Msp20I TGGCCA 2 cut(s) 1180, 2270
MspA1I CMGCKG 1 cut(s) 1439
MspR9I CCNGG 1 cut(s) 700
MunI CAATTG 2 cut(s) 901, 1367
MvaI CCWGG 1 cut(s) 700
MwoI GCNNNNNNNGC 8 cut(s) 475, 492, 607, 1410, 1750, 1858, 1991, 2228
NdeI CATATG 1 cut(s) 332
NdeII GATC 8 cut(s) 78, 892, 940, 1294, 1381, 1417, 1648, 1846
NlaIII CATG 8 cut(s) 361, 963, 1094, 1339, 1619, 1880, 2153, 2257
NlaIV GGNNCC 4 cut(s) 24, 45, 1155, 1461
NmuCI GTSAC 2 cut(s) 2093, 2261
NsiI ATGCAT 1 cut(s) 497
NspI RCATGY 4 cut(s) 963, 1094, 1880, 2257
PaeR7I CTCGAG 3 cut(s) 1631, 2111, 2183
PciI ACATGT 2 cut(s) 959, 1876
PcsI WCGNNNNNNNCGW 1 cut(s) 1103
PdmI GAANNNNTTC 1 cut(s) 1464
PfeI GAWTC 4 cut(s) 125, 1101, 1715, 2005
PkrI GCNGC 2 cut(s) 477, 2224
PleI GAGTC 3 cut(s) 734, 961, 988
PmaCI CACGTG 1 cut(s) 1107
PmlI CACGTG 1 cut(s) 1107
PpsI GAGTC 3 cut(s) 734, 961, 988
Ppu21I YACGTR 2 cut(s) 1107, 2261
PscI ACATGT 2 cut(s) 959, 1876
Psp6I CCWGG 1 cut(s) 698
PspCI CACGTG 1 cut(s) 1107
PspGI CCWGG 1 cut(s) 698
PspN4I GGNNCC 4 cut(s) 24, 45, 1155, 1461
PspPI GGNCC 1 cut(s) 22
PspXI VCTCGAGB 3 cut(s) 1631, 2111, 2183
PsuI RGATCY 2 cut(s) 78, 1294
PvuII CAGCTG 1 cut(s) 1439
RsaI GTAC 5 cut(s) 45, 196, 667, 964, 1964
RsaNI GTAC 5 cut(s) 44, 195, 666, 963, 1963
RseI CAYNNNNRTG 1 cut(s) 2148
SaqAI TTAA 4 cut(s) 432, 821, 1611, 1755
SatI GCNGC 2 cut(s) 476, 2223
Sau3AI GATC 8 cut(s) 78, 892, 940, 1294, 1381, 1417, 1648, 1846
Sau96I GGNCC 1 cut(s) 22
SchI GAGTC 3 cut(s) 734, 962, 989
ScrFI CCNGG 1 cut(s) 700
SfaNI GCATC 4 cut(s) 504, 1119, 1651, 2162
SfcI CTRYAG 1 cut(s) 2071
Sfr274I CTCGAG 3 cut(s) 1631, 2111, 2183
SlaI CTCGAG 3 cut(s) 1631, 2111, 2183
SmiMI CAYNNNNRTG 1 cut(s) 2148
SmlI CTYRAG 6 cut(s) 1472, 1631, 1692, 1943, 2111, 2183
SmoI CTYRAG 6 cut(s) 1472, 1631, 1692, 1943, 2111, 2183
SpeI ACTAGT 2 cut(s) 2123, 2135
SsiI CCGC 2 cut(s) 475, 580
SspMI CTAG 4 cut(s) 396, 402, 2124, 2136
StyD4I CCNGG 1 cut(s) 698
StyI CCWWGG 2 cut(s) 1181, 1307
TaaI ACNGT 8 cut(s) 532, 665, 686, 725, 734, 1396, 2039, 2093
TaiI ACGT 2 cut(s) 1109, 2263
TaqI TCGA 6 cut(s) 135, 660, 1632, 2112, 2184, 2248
TaqII GACCGA 1 cut(s) 135
TatI WGTACW 1 cut(s) 665
TauI GCSGC 1 cut(s) 478
TfiI GAWTC 4 cut(s) 125, 1101, 1715, 2005
Tru1I TTAA 4 cut(s) 432, 821, 1611, 1755
Tru9I TTAA 4 cut(s) 432, 821, 1611, 1755
TscAI CASTG 9 cut(s) 609, 739, 1012, 1218, 1420, 1486, 1956, 2098, 2212
TseFI GTSAC 2 cut(s) 2093, 2261
TseI GCWGC 1 cut(s) 2222
Tsp45I GTSAC 2 cut(s) 2093, 2261
TspRI CASTG 9 cut(s) 609, 739, 1012, 1218, 1420, 1486, 1956, 2098, 2212
XapI RAATTY 3 cut(s) 290, 1814, 1954
XceI RCATGY 4 cut(s) 963, 1094, 1880, 2257
XhoI CTCGAG 3 cut(s) 1631, 2111, 2183
XmiI GTMKAC 1 cut(s) 351
XmnI GAANNNNTTC 1 cut(s) 1464
XspI CTAG 4 cut(s) 396, 402, 2124, 2136
Zsp2I ATGCAT 1 cut(s) 497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.