RchiOBHm_Chr2g0101231

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000659
Physical Location & Seq
Reverse (-)
12896039 .. 12898423
2385 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47585

Sequence Viewer

Length: 1707 bp
ATGGCTAGCACTAGCAGCTGGAAACAGATTTTGTGCGGGTTGGCCTTGGTTTTTTTTGGGTTGTTTCTTGGTTCATTCACTTCTCCAGCAGAAGCTGCCATAAAGAATTACCAATTTGATATACAAGTGAAGAATGTGAGTAGATTGTGCCATGCAAAACCCATTGTTACTGTAAACGGGAGGTTTCCGGGGCCAACTATCTATGTAAGGGAAGGAGATAGCGTTCTTGTCAATGTTACAAACCATGCTCAATATAACATGTCAATTCACTGGCATGGATTGAAACAGTACCGAAATGGTTGGGCGGATGGACCAGCATATGTGACACAGTGTCCTATCCAGACTGGGAATAGCTACACCTATGCCTTCAATGTAACAGGCCAAAGAGGAACTTTGTGGTGGCATGCACATATTCTTTGGCTAAGGGCCACTGTCTATGGCGCAATTGTCATCATGCCTAAACAAGGCACCCCATTTCCTTTTCCACTTCCACAGCCATATAGGGAAGCCGAAATTGTACTAGGAGAATGGTGGAATGTGGATGTCGAAGAAGTTGTGAAGCAAGGAAACAACATGGGCTTGCCGCCAAATTCCTCAGATGCTCACACCATCAATGGCAAGCCAGGGCCATTGTTTCCATGCTCCGAGAAACATACATATGTATTAGAGGTTGAGCAAGGGAAGACATACCTCCTGAGAATCATCAACGCAGCCCTCAACGACGTACTTTTCTTCGGCATTGCTGGTCACAGCTTGACAGTAGTGGAGGTTGATGCAGTTTACACAAAACCATTCACTACTCAAGCCATACTAATTGCACCAGGCCAGACCACAAACGTTCTGGTCCAAGCCAATCAAGTCCCAAACAGATACTTCATGGCTGCCAGGCCTTTCATGGATGTTCCAATTCCAATAGACAACAAGACCGCCGCGGCCATACTCCAATACAGAGGAGTCCCCAACTCTGTTCTACCAATCCGTCCCCAACTTCCTTCCTCTAATGACACCACCTTTGCTTTAGGCTACGAGAATAAGCTCAAAAGTTTAAACACTCCAAAATTCCCAGCAAATGTTCCACTCAAAGTTGACAGACACCTGTTCTACACTATTGGTTTCGGAAAAGAATCTTGCCCAAGTTGCCTTAACGGAACACGATTTGTTGCTTCCTTGAACAATATCTCTTTCGAGATGCCCCAGGTTGCGCTTTTGCAAGCTCATTACTTCAACATCAAAGGGGTATTTAAGACTGACTTTCCTGATAAGCCACCGACTTCTTTCAACTATACTGGTGCACCACTCACAGCCAATCTTGGGACTTCAAGTGCCACCCGACTGAGCAAGATTGCATTCAACTCTACAGTTGAGTTGGTTTTGCAGGACACCAATCTTCTAACAGTGGAGTCACATCCATTCCATCTTCATGGATACAACTTTTTTGTTGTTGGAACCGGTATTGGGAATTTTGATCCTGCCACGGACCCAGCTAAGTACAACTTGGTTGATCCTGTTGAGAGAAATACCGTTGCGGTTCCCACCGGTGGTTGGACCGCCATTCGTTTCAGAGCTGATAATCCAGGCGTTTGGTTCTTGCACTGTCATTTGGAGCTTCATACCGGATGGGGATTGAAAACGGCATTTGTTGTGGAAGATGGACCAGGCGCGTCTCAATCTGTTCTGCCTCCGCCAAAGGACCTTCCACAATGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

568

Amino Acids

62.65

Weight (kDa)

8.29

Isoelectric Point (pI)

33.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 41 - 155 1.2e-43 Multicopper oxidase
Cu-oxidase PF00394 172 - 318 5.5e-44 Multicopper oxidase
Cu-oxidase_2 PF07731 417 - 550 5e-43 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000659)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03260
fragaria_vesca FvH4_1g13060 FvH4_2g08670 FvH4_2g08670 FvH4_2g08670 FvH4_2g08840 FvH4_2g08860 FvH4_2g09061
malus_domestica MD02G1145100.v1.1 MD05G1064600.v1.1 MD10G1073700.v1.1 MD15G1258600.v1.1 MD15G1259300.v1.1
prunus_persica Prupe.6G177700_v2.0.a1 Prupe.7G156500_v2.0.a1 Prupe.8G095000_v2.0.a1 Prupe.8G095400_v2.0.a1 Prupe.8G097000_v2.0.a1
pyrus_communis pycom02g11490 pycom05g05550 pycom15g22710
rosa_chinensis RchiOBHm_Chr2g0101231 RchiOBHm_Chr6g0264061 RchiOBHm_Chr6g0264101 RchiOBHm_Chr6g0264311 RchiOBHm_Chr6g0264361 RchiOBHm_Chr6g0264441 RchiOBHm_Chr6g0264891
rosa_laevigata RLG00000014229 RLG00000014253 RLG00000014265 RLG00000014267 RLG00000014269 RLG00000014291 RLG00000014292 RLG00000014316 RLG00000017063
rosa_multiflora Rmu_co8391921.1_g000001 Rmu_co8519839.1_g000001 Rmu_sc0000546.1_g000055 Rmu_sc0002305.1_g000003 Rmu_sc0004470.1_g000004 Rmu_sc0006314.1_g000014 Rmu_sc0009807.1_g000001 Rmu_sc0010483.1_g000004
rosa_roxburghii Rroxscaffold_175G00432050 Rroxscaffold_176G00431400 Rroxscaffold_176G00431740 Rroxscaffold_176G00431790 Rroxscaffold_7G00203140 Rroxscaffold_7G00203620
rosa_rugosa Rorug02G0100200 Rorug06G0007600 Rorug06G0012500 Rorug06G0012600 Rorug06G0014100
rosa_samantha Rh2BG150700 Rh2DG150800 Rh6AG128900 Rh6AG131700 Rh6BG124500 Rh6BG124800 Rh6BG128400 Rh6BG129400 Rh6BG132600 Rh6CG123100 Rh6DG110500 Rh6DG113900 Rh6DG114900 Rh6DG118200
rosa_wichuraiana Rw2G011330 Rw6G011140 Rw6G011160 Rw6G011480 Rw6G011540 Rw6G011680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 467
AccII CGCG 2 cut(s) 932, 1661
AciI CCGC 9 cut(s) 36, 305, 584, 927, 930, 932, 1526, 1548, 1682
AclI AACGTT 1 cut(s) 837
AclWI GGATC 2 cut(s) 1460, 1496
AcoI YGGCCR 1 cut(s) 933
AcsI RAATTY 3 cut(s) 589, 1058, 1459
AfaI GTAC 4 cut(s) 290, 519, 726, 1490
AfiI CCNNNNNNNGG 5 cut(s) 464, 1311, 1455, 1538, 1542
AflIII ACRYGT 1 cut(s) 258
AgeI ACCGGT 2 cut(s) 1448, 1535
AgsI TTSAA 8 cut(s) 283, 370, 1171, 1225, 1279, 1320, 1351, 1627
AhdI GACNNNNNGTC 1 cut(s) 330
AjnI CCWGG 6 cut(s) 622, 820, 884, 1194, 1573, 1654
AloI GAACNNNNNNTCC 2 cut(s) 207, 239
AluBI AGCT 9 cut(s) 18, 95, 354, 753, 1036, 1214, 1484, 1565, 1606
AluI AGCT 9 cut(s) 18, 95, 354, 753, 1036, 1214, 1484, 1565, 1606
Alw21I GWGCWC 1 cut(s) 1294
Alw26I GTCTC 1 cut(s) 1668
Alw44I GTGCAC 1 cut(s) 1290
AlwI GGATC 2 cut(s) 1460, 1496
AlwNI CAGNNNCTG 1 cut(s) 95
AoxI GGCC 8 cut(s) 42, 191, 379, 426, 626, 823, 887, 933
ApaLI GTGCAC 1 cut(s) 1290
ApeKI GCWGC 4 cut(s) 15, 95, 710, 881
ApoI RAATTY 3 cut(s) 589, 1058, 1459
ArsI GACNNNNNNTTYG 2 cut(s) 995, 1027
AsiGI ACCGGT 2 cut(s) 1448, 1535
AspLEI GCGC 3 cut(s) 443, 1204, 1661
AspS9I GGNCC 9 cut(s) 191, 311, 426, 626, 844, 1477, 1545, 1652, 1690
AsuC2I CCSGG 1 cut(s) 189
AsuNHI GCTAGC 1 cut(s) 5
AvaII GGWCC 6 cut(s) 311, 844, 1477, 1545, 1652, 1690
BaeGI GKGCMC 1 cut(s) 1294
BanI GGYRCC 1 cut(s) 467
BbsI GAAGAC 1 cut(s) 689
Bbv12I GWGCWC 1 cut(s) 1294
BbvI GCAGC 4 cut(s) 27, 82, 722, 868
BccI CCATC 5 cut(s) 302, 617, 1422, 1611, 1643
BceAI ACGGC 1 cut(s) 1647
BciT130I CCWGG 6 cut(s) 624, 822, 886, 1196, 1575, 1656
BciVI GTATCC 1 cut(s) 1418
BcnI CCSGG 1 cut(s) 189
BcoDI GTCTC 1 cut(s) 1668
BfaI CTAG 3 cut(s) 6, 12, 521
BfmI CTRYAG 1 cut(s) 1356
BfuI GTATCC 1 cut(s) 1418
BisI GCNGC 7 cut(s) 16, 96, 584, 711, 882, 930, 933
BlsI GCNGC 7 cut(s) 17, 97, 585, 712, 883, 931, 934
Bme1390I CCNGG 7 cut(s) 189, 624, 822, 886, 1196, 1575, 1656
Bme18I GGWCC 6 cut(s) 311, 844, 1477, 1545, 1652, 1690
BmeRI GACNNNNNGTC 1 cut(s) 330
BmgT120I GGNCC 9 cut(s) 191, 311, 426, 626, 844, 1477, 1545, 1652, 1690
BmiI GGNNCC 5 cut(s) 192, 469, 1447, 1479, 1530
BmrFI CCNGG 7 cut(s) 189, 624, 822, 886, 1196, 1575, 1656
BmrI ACTGGG 1 cut(s) 354
BmsI GCATC 3 cut(s) 589, 763, 1179
BmtI GCTAGC 1 cut(s) 9
BmuI ACTGGG 1 cut(s) 354
BpiI GAAGAC 1 cut(s) 689
BpmI CTGGAG 1 cut(s) 69
Bpu10I CCTNAGC 1 cut(s) 422
BpuEI CTTGAG 1 cut(s) 786
BpuMI CCSGG 1 cut(s) 189
BsaJI CCNNGG 6 cut(s) 45, 188, 623, 930, 1194, 1473
BsaWI WCCGGW 3 cut(s) 1448, 1535, 1613
BsaXI ACNNNNNCTCC 2 cut(s) 207, 237
Bsc4I CCNNNNNNNGG 5 cut(s) 464, 1311, 1455, 1538, 1542
Bse118I RCCGGY 2 cut(s) 1448, 1535
Bse1I ACTGG 3 cut(s) 275, 349, 1291
Bse3DI GCAATG 1 cut(s) 738
BseBI CCWGG 6 cut(s) 624, 822, 886, 1196, 1575, 1656
BseDI CCNNGG 6 cut(s) 45, 188, 623, 930, 1194, 1473
BseGI GGATG 5 cut(s) 313, 547, 904, 1405, 1622
BseLI CCNNNNNNNGG 5 cut(s) 464, 1311, 1455, 1538, 1542
BseMI GCAATG 1 cut(s) 738
BseMII CTCAG 3 cut(s) 609, 686, 1325
BseNI ACTGG 3 cut(s) 275, 349, 1291
BseRI GAGGAG 1 cut(s) 966
BseSI GKGCMC 1 cut(s) 1294
BseXI GCAGC 4 cut(s) 27, 82, 722, 868
BseYI CCCAGC 2 cut(s) 1063, 1480
Bsh1236I CGCG 2 cut(s) 932, 1661
BshFI GGCC 8 cut(s) 44, 193, 381, 428, 628, 825, 889, 935
BshNI GGYRCC 1 cut(s) 467
BshTI ACCGGT 2 cut(s) 1448, 1535
BsiHKAI GWGCWC 1 cut(s) 1294
BsiSI CCGG 4 cut(s) 188, 1449, 1536, 1614
BslFI GGGAC 4 cut(s) 845, 941, 966, 1327
BslI CCNNNNNNNGG 5 cut(s) 464, 1311, 1455, 1538, 1542
BsmAI GTCTC 1 cut(s) 1668
BsmBI CGTCTC 1 cut(s) 1668
BsmFI GGGAC 4 cut(s) 845, 941, 966, 1327
BsmI GAATGC 1 cut(s) 1346
BsnI GGCC 8 cut(s) 44, 193, 381, 428, 628, 825, 889, 935
Bsp1286I GDGCHC 1 cut(s) 1294
Bsp143I GATC 2 cut(s) 1465, 1501
BspACI CCGC 9 cut(s) 36, 305, 584, 927, 930, 932, 1526, 1548, 1682
BspANI GGCC 8 cut(s) 44, 193, 381, 428, 628, 825, 889, 935
BspCNI CTCAG 3 cut(s) 608, 687, 1326
BspFNI CGCG 2 cut(s) 932, 1661
BspLI GGNNCC 5 cut(s) 192, 469, 1447, 1479, 1530
BspOI GCTAGC 1 cut(s) 9
BspPI GGATC 2 cut(s) 1460, 1496
BspT107I GGYRCC 1 cut(s) 467
BsrDI GCAATG 1 cut(s) 738
BsrFI RCCGGY 2 cut(s) 1448, 1535
BsrI ACTGG 3 cut(s) 275, 349, 1291
BssAI RCCGGY 2 cut(s) 1448, 1535
BssECI CCNNGG 6 cut(s) 45, 188, 623, 930, 1194, 1473
BssMI GATC 2 cut(s) 1465, 1501
BssT1I CCWWGG 1 cut(s) 45
Bst2UI CCWGG 6 cut(s) 624, 822, 886, 1196, 1575, 1656
Bst4CI ACNGT 9 cut(s) 172, 288, 330, 433, 760, 1360, 1396, 1522, 1595
BstAPI GCANNNNNTGC 1 cut(s) 95
BstC8I GCNNGC 5 cut(s) 7, 405, 581, 620, 1212
BstDEI CTNAG 5 cut(s) 422, 595, 695, 1334, 1485
BstDSI CCRYGG 2 cut(s) 930, 1473
BstENI CCTNNNNNAGG 1 cut(s) 462
BstF5I GGATG 5 cut(s) 313, 547, 904, 1405, 1622
BstFNI CGCG 2 cut(s) 932, 1661
BstHHI GCGC 3 cut(s) 443, 1204, 1661
BstKTI GATC 2 cut(s) 1468, 1504
BstMAI GTCTC 1 cut(s) 1668
BstMBI GATC 2 cut(s) 1465, 1501
BstMWI GCNNNNNNNGC 3 cut(s) 15, 95, 1137
BstNI CCWGG 6 cut(s) 624, 822, 886, 1196, 1575, 1656
BstNSI RCATGY 2 cut(s) 262, 407
BstSCI CCNGG 7 cut(s) 187, 622, 820, 884, 1194, 1573, 1654
BstSFI CTRYAG 1 cut(s) 1356
BstSLI GKGCMC 1 cut(s) 1294
BstUI CGCG 2 cut(s) 932, 1661
BstV1I GCAGC 4 cut(s) 27, 82, 722, 868
BstV2I GAAGAC 1 cut(s) 689
BstXI CCANNNNNNTGG 2 cut(s) 1421, 1581
BsuI GTATCC 1 cut(s) 1418
BsuRI GGCC 8 cut(s) 44, 193, 381, 428, 628, 825, 889, 935
BtgI CCRYGG 2 cut(s) 930, 1473
BtsCI GGATG 5 cut(s) 313, 547, 904, 1405, 1622
BtsIMutI CAGTG 5 cut(s) 268, 335, 429, 1401, 1591
Cac8I GCNNGC 5 cut(s) 7, 405, 581, 620, 1212
CaiI CAGNNNCTG 1 cut(s) 95
CfoI GCGC 3 cut(s) 443, 1204, 1661
Cfr10I RCCGGY 2 cut(s) 1448, 1535
Cfr13I GGNCC 9 cut(s) 191, 311, 426, 626, 844, 1477, 1545, 1652, 1690
Cfr42I CCGCGG 1 cut(s) 933
CseI GACGC 1 cut(s) 1650
Csp6I GTAC 4 cut(s) 289, 518, 725, 1489
CspAI ACCGGT 2 cut(s) 1448, 1535
CviQI GTAC 4 cut(s) 289, 518, 725, 1489
DdeI CTNAG 5 cut(s) 422, 595, 695, 1334, 1485
DpnI GATC 2 cut(s) 1467, 1503
DpnII GATC 2 cut(s) 1465, 1501
DraI TTTAAA 1 cut(s) 1047
DriI GACNNNNNGTC 1 cut(s) 330
EaeI YGGCCR 1 cut(s) 933
Eam1105I GACNNNNNGTC 1 cut(s) 330
EciI GGCGGA 2 cut(s) 320, 1671
Eco130I CCWWGG 1 cut(s) 45
Eco147I AGGCCT 1 cut(s) 889
Eco47I GGWCC 6 cut(s) 311, 844, 1477, 1545, 1652, 1690
EcoNI CCTNNNNNAGG 1 cut(s) 462
EcoO109I RGGNCCY 1 cut(s) 1690
EcoRII CCWGG 6 cut(s) 622, 820, 884, 1194, 1573, 1654
EcoT14I CCWWGG 1 cut(s) 45
ErhI CCWWGG 1 cut(s) 45
Esp3I CGTCTC 1 cut(s) 1668
FalI AAGNNNNNCTT 6 cut(s) 376, 408, 1235, 1267, 1478, 1510
FaqI GGGAC 4 cut(s) 845, 941, 966, 1327
FauI CCCGC 1 cut(s) 29
FauNDI CATATG 2 cut(s) 319, 658
Fnu4HI GCNGC 7 cut(s) 16, 96, 584, 711, 882, 930, 933
FokI GGATG 5 cut(s) 320, 554, 911, 1392, 1629
Fsp4HI GCNGC 7 cut(s) 16, 96, 584, 711, 882, 930, 933
FspBI CTAG 3 cut(s) 6, 12, 521
GlaI GCGC 3 cut(s) 442, 1203, 1660
GluI GCNGC 7 cut(s) 16, 96, 584, 711, 882, 930, 933
GsaI CCCAGC 2 cut(s) 1067, 1484
GsuI CTGGAG 1 cut(s) 69
HaeIII GGCC 8 cut(s) 44, 193, 381, 428, 628, 825, 889, 935
HapII CCGG 4 cut(s) 188, 1449, 1536, 1614
HgaI GACGC 1 cut(s) 1650
HhaI GCGC 3 cut(s) 443, 1204, 1661
Hin6I GCGC 3 cut(s) 441, 1202, 1659
HinP1I GCGC 3 cut(s) 441, 1202, 1659
HincII GTYRAC 1 cut(s) 1087
HindII GTYRAC 1 cut(s) 1087
HinfI GANTC 4 cut(s) 699, 954, 1124, 1400
HpaII CCGG 4 cut(s) 188, 1449, 1536, 1614
Hpy166II GTNNAC 4 cut(s) 175, 781, 1087, 1292
Hpy188I TCNGA 4 cut(s) 598, 646, 1118, 1562
Hpy188III TCNNGA 4 cut(s) 340, 694, 1186, 1256
Hpy8I GTNNAC 4 cut(s) 175, 781, 1087, 1292
Hpy99I CGWCG 1 cut(s) 725
HpyAV CCTTC 4 cut(s) 206, 376, 1002, 1703
HpyCH4III ACNGT 9 cut(s) 172, 288, 330, 433, 760, 1360, 1396, 1522, 1595
HpyCH4IV ACGT 2 cut(s) 723, 837
HpyCH4V TGCA 9 cut(s) 155, 407, 776, 818, 1210, 1292, 1346, 1375, 1591
HpyF10VI GCNNNNNNNGC 3 cut(s) 15, 95, 1137
HpyF3I CTNAG 5 cut(s) 422, 595, 695, 1334, 1485
HpySE526I ACGT 2 cut(s) 723, 837
HspAI GCGC 3 cut(s) 441, 1202, 1659
KspI CCGCGG 1 cut(s) 933
Kzo9I GATC 2 cut(s) 1465, 1501
LmnI GCTCC 2 cut(s) 647, 1603
Lsp1109I GCAGC 4 cut(s) 27, 82, 722, 868
LweI GCATC 3 cut(s) 589, 763, 1179
MaeI CTAG 3 cut(s) 6, 12, 521
MaeII ACGT 2 cut(s) 723, 837
MaeIII GTNAC 6 cut(s) 166, 235, 322, 373, 746, 1401
MalI GATC 2 cut(s) 1467, 1503
MboI GATC 2 cut(s) 1465, 1501
MboII GAAGA 7 cut(s) 142, 560, 694, 724, 1379, 1409, 1658
MfeI CAATTG 1 cut(s) 444
MhlI GDGCHC 1 cut(s) 1294
MlyI GAGTC 2 cut(s) 963, 1409
MmeI TCCRAC 2 cut(s) 1423, 1523
MseI TTAA 3 cut(s) 1046, 1143, 1242
MslI CAYNNNNRTG 3 cut(s) 273, 657, 1419
MspA1I CMGCKG 2 cut(s) 18, 932
MspI CCGG 4 cut(s) 188, 1449, 1536, 1614
MspR9I CCNGG 7 cut(s) 189, 624, 822, 886, 1196, 1575, 1656
MssI GTTTAAAC 1 cut(s) 1047
MunI CAATTG 1 cut(s) 444
Mva1269I GAATGC 1 cut(s) 1346
MvaI CCWGG 6 cut(s) 624, 822, 886, 1196, 1575, 1656
MvnI CGCG 2 cut(s) 932, 1661
MwoI GCNNNNNNNGC 3 cut(s) 15, 95, 1137
NciI CCSGG 1 cut(s) 189
NdeI CATATG 2 cut(s) 319, 658
NdeII GATC 2 cut(s) 1465, 1501
NheI GCTAGC 1 cut(s) 5
NlaIV GGNNCC 5 cut(s) 192, 469, 1447, 1479, 1530
NmuCI GTSAC 3 cut(s) 322, 746, 1401
NspI RCATGY 2 cut(s) 262, 407
PaeI GCATGC 1 cut(s) 407
PceI AGGCCT 1 cut(s) 889
PciI ACATGT 1 cut(s) 258
PctI GAATGC 1 cut(s) 1346
PfeI GAWTC 2 cut(s) 699, 1124
PinAI ACCGGT 2 cut(s) 1448, 1535
PkrI GCNGC 7 cut(s) 17, 97, 585, 712, 883, 931, 934
PleI GAGTC 2 cut(s) 962, 1408
PmeI GTTTAAAC 1 cut(s) 1047
PpsI GAGTC 2 cut(s) 962, 1408
PpuMI RGGWCCY 1 cut(s) 1690
PscI ACATGT 1 cut(s) 258
Psp1406I AACGTT 1 cut(s) 837
Psp5II RGGWCCY 1 cut(s) 1690
Psp6I CCWGG 6 cut(s) 622, 820, 884, 1194, 1573, 1654
PspFI CCCAGC 2 cut(s) 1063, 1480
PspGI CCWGG 6 cut(s) 622, 820, 884, 1194, 1573, 1654
PspN4I GGNNCC 5 cut(s) 192, 469, 1447, 1479, 1530
PspPI GGNCC 9 cut(s) 191, 311, 426, 626, 844, 1477, 1545, 1652, 1690
PspPPI RGGWCCY 1 cut(s) 1690
PstNI CAGNNNCTG 1 cut(s) 95
PvuII CAGCTG 1 cut(s) 18
RsaI GTAC 4 cut(s) 290, 519, 726, 1490
RsaNI GTAC 4 cut(s) 289, 518, 725, 1489
RseI CAYNNNNRTG 3 cut(s) 273, 657, 1419
SacII CCGCGG 1 cut(s) 933
SaqAI TTAA 3 cut(s) 1046, 1143, 1242
SatI GCNGC 7 cut(s) 16, 96, 584, 711, 882, 930, 933
Sau3AI GATC 2 cut(s) 1465, 1501
Sau96I GGNCC 9 cut(s) 191, 311, 426, 626, 844, 1477, 1545, 1652, 1690
SchI GAGTC 2 cut(s) 963, 1409
ScrFI CCNGG 7 cut(s) 189, 624, 822, 886, 1196, 1575, 1656
SduI GDGCHC 1 cut(s) 1294
SfaNI GCATC 3 cut(s) 589, 763, 1179
SfcI CTRYAG 1 cut(s) 1356
Sfr303I CCGCGG 1 cut(s) 933
SgrAI CRCCGGYG 1 cut(s) 1535
SgrBI CCGCGG 1 cut(s) 933
SinI GGWCC 6 cut(s) 311, 844, 1477, 1545, 1652, 1690
SmiMI CAYNNNNRTG 3 cut(s) 273, 657, 1419
SmlI CTYRAG 1 cut(s) 801
SmoI CTYRAG 1 cut(s) 801
SphI GCATGC 1 cut(s) 407
SseBI AGGCCT 1 cut(s) 889
SsiI CCGC 9 cut(s) 36, 305, 584, 927, 930, 932, 1526, 1548, 1682
SspMI CTAG 3 cut(s) 6, 12, 521
StuI AGGCCT 1 cut(s) 889
StyD4I CCNGG 7 cut(s) 187, 622, 820, 884, 1194, 1573, 1654
StyI CCWWGG 1 cut(s) 45
TaaI ACNGT 9 cut(s) 172, 288, 330, 433, 760, 1360, 1396, 1522, 1595
TaiI ACGT 2 cut(s) 726, 840
TaqI TCGA 2 cut(s) 546, 1185
TatI WGTACW 2 cut(s) 517, 1488
TauI GCSGC 3 cut(s) 586, 932, 935
TfiI GAWTC 2 cut(s) 699, 1124
Tru1I TTAA 3 cut(s) 1046, 1143, 1242
Tru9I TTAA 3 cut(s) 1046, 1143, 1242
TscAI CASTG 5 cut(s) 275, 335, 436, 1401, 1598
TseFI GTSAC 3 cut(s) 322, 746, 1401
TseI GCWGC 4 cut(s) 15, 95, 710, 881
Tsp45I GTSAC 3 cut(s) 322, 746, 1401
TspDTI ATGAA 5 cut(s) 63, 865, 883, 1409, 1598
TspGWI ACGGA 3 cut(s) 968, 1161, 1490
TspRI CASTG 5 cut(s) 275, 335, 436, 1401, 1598
VneI GTGCAC 1 cut(s) 1290
VpaK11BI GGWCC 6 cut(s) 311, 844, 1477, 1545, 1652, 1690
XagI CCTNNNNNAGG 1 cut(s) 462
XapI RAATTY 3 cut(s) 589, 1058, 1459
XceI RCATGY 2 cut(s) 262, 407
XcmI CCANNNNNNNNNTGG 2 cut(s) 838, 892
XspI CTAG 3 cut(s) 6, 12, 521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.