Rorug02G0100200

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000659
Physical Location & Seq
Forward (+)
8519326 .. 8523498
4173 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0100200.1

Sequence Viewer

Length: 1701 bp
ATGAAGTCCTCAAAGAAACACTACAAGGATAAAGTCGTTCGCCGCAAAGAGGAGAAAGCAGAGCAACCGGAGTTGCCGAAATACAGAGACAGAGCTAAGGAGAGGAGAGATGATCAGAACCCTGATTATGAGGCCAATGAGTTGGGTTCTTTTCATGCCGTTGCGCCGCCGGGGAATGTTGATCTCGGGGCAGCTGATGTGCACAAGTTGTCAATCGAGAAGAGCAAGTATCTCGGAGGTGATCTGGAACACACGCATTTGGTGAAAGGATTGGATTATGCCTTACTTACCAAAGTAAGAAGTGAGATTGATAAGAAGCCAGATGTTGGAGATGAGGCTGATGCGAAATCTAGAGCATCTAAGGAAGACCAAAAAGTGTCATTTCGAACAGCAACTGCAAAGTCAGTCTATCAATGGATAGTTAAGCCCCAGACTGTTATCAAAACCAACGAGATGTTCCTGCCTGGTAGATTGTCATTTATTTTTAACATGGAGGGTGGATACACTCATGACATTCCTACGACCTTGCATAGGAGTAAAGCCGACTGTCCACAGCCTGAGGAAATGGCAACTGTCAGTTTTGATGGTGCTGTACTTGAAAAAATTTCTGCAAGTATGTCATATCTTCGTGTTGGATCTTCTGGGAAGGCTGCCAAGAAGAAAAAGAAGGGGAAAGATGCAAAAGTTACAGGAAAGATTTTAGTTGGTAATGGATATGCGGAAGAGGATAAGCCCTCTAAGCCTGATATTGGGGTTGTGAAGAATGAAACTAAAAGAGAGATTTTGCCCCCACCTCCACCTCTTCCCAGGAAAACTCATATAGATTCGCAAGAAAAACAAGGCCCAACTATTGCACGAGCAGATGAGGATGACATTTTTGTAGGTGATGGTGTTGACTATGCTATTCCTGGTAAAGATTTGAGCCAAAGCCCTCTCTCGGAGGACATGGAAGAGTCTCCCAGGACCAAAGAAAAAGTTTCTTATTTTGATGAACCAGCTTATGGTCCTGTCCAACCCTATGGGCTGCCTAATGAATGGCAAGAAACGAATGGATACGATGCGACCACACAACAACCAATGGTTGGCCCCTACCAAGGAGACTGGCAGGAATACCAATATGCTGAGCAAGTGGCTTATCCTGAACAGTACCTCCAGCCAAATATAGAGGGTTACGATGTGCAAGAAGGTCTAATACAAGATCCACGCTTTATGACTCAAGAAGAGAAGGATAGGGGTTTAGGCTCTGTGTTTAAGCGGGATGACCAAAGACTTCAACAATTGAGGGAGAAAGACGCTCGAGAAAAGGATCCCAACTTTATCTCAGAGAGTTATTCTGAATGTTACCCGGGCTATCAAGAATATAATCGTGAGGTTGTTGACAGCGATGATGAGGATGACTTGTCAAAAATGGACATGGGTGGACGAGCCAAGGGTCGTCTTCATCGGTGGGACTTCGAGACAGAAGAAGAATGGGCAACATACAATGAACAGAAGGAGGCTATGCCTAAGGCGGCATTCCAGTTTGGTGTGAAGATGCAAGATGGTAGAAAGACACGAAAGCAAAACAAGGACCAGAAGATCAATAATGATCTGAACAGGATCAACAAGATACTTGCTAGAAAGAAGTCAGAGAAGGATGGGGATGATGATGGTGGCCATTACGATGAAGATGTACAGCCTGGCAAGAAACTTAGAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

566

Amino Acids

64.42

Weight (kDa)

5.48

Isoelectric Point (pI)

47.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RED_N PF07808 5 - 222 1.1e-79 RED-like protein N-terminal region
RED_C PF07807 444 - 550 2.5e-43 RED-like protein C-terminal region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000659)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03260
fragaria_vesca FvH4_1g13060 FvH4_2g08670 FvH4_2g08670 FvH4_2g08670 FvH4_2g08840 FvH4_2g08860 FvH4_2g09061
malus_domestica MD02G1145100.v1.1 MD05G1064600.v1.1 MD10G1073700.v1.1 MD15G1258600.v1.1 MD15G1259300.v1.1
prunus_persica Prupe.6G177700_v2.0.a1 Prupe.7G156500_v2.0.a1 Prupe.8G095000_v2.0.a1 Prupe.8G095400_v2.0.a1 Prupe.8G097000_v2.0.a1
pyrus_communis pycom02g11490 pycom05g05550 pycom15g22710
rosa_chinensis RchiOBHm_Chr2g0101231 RchiOBHm_Chr6g0264061 RchiOBHm_Chr6g0264101 RchiOBHm_Chr6g0264311 RchiOBHm_Chr6g0264361 RchiOBHm_Chr6g0264441 RchiOBHm_Chr6g0264891
rosa_laevigata RLG00000014229 RLG00000014253 RLG00000014265 RLG00000014267 RLG00000014269 RLG00000014291 RLG00000014292 RLG00000014316 RLG00000017063
rosa_multiflora Rmu_co8391921.1_g000001 Rmu_co8519839.1_g000001 Rmu_sc0000546.1_g000055 Rmu_sc0002305.1_g000003 Rmu_sc0004470.1_g000004 Rmu_sc0006314.1_g000014 Rmu_sc0009807.1_g000001 Rmu_sc0010483.1_g000004
rosa_roxburghii Rroxscaffold_175G00432050 Rroxscaffold_176G00431400 Rroxscaffold_176G00431740 Rroxscaffold_176G00431790 Rroxscaffold_7G00203140 Rroxscaffold_7G00203620
rosa_rugosa Rorug02G0100200 Rorug06G0007600 Rorug06G0012500 Rorug06G0012600 Rorug06G0014100
rosa_samantha Rh2BG150700 Rh2DG150800 Rh6AG128900 Rh6AG131700 Rh6BG124500 Rh6BG124800 Rh6BG128400 Rh6BG129400 Rh6BG132600 Rh6CG123100 Rh6DG110500 Rh6DG113900 Rh6DG114900 Rh6DG118200
rosa_wichuraiana Rw2G011330 Rw6G011140 Rw6G011160 Rw6G011480 Rw6G011540 Rw6G011680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 326, 1001, 1082
AciI CCGC 5 cut(s) 43, 167, 719, 1255, 1511
AclWI GGATC 5 cut(s) 643, 1193, 1301, 1314, 1607
AcoI YGGCCR 1 cut(s) 1654
AcsI RAATTY 1 cut(s) 603
AfaI GTAC 3 cut(s) 594, 1148, 1674
AfiI CCNNNNNNNGG 8 cut(s) 49, 326, 531, 749, 937, 1001, 1082, 1094
AgsI TTSAA 2 cut(s) 599, 1274
AjnI CCWGG 5 cut(s) 463, 806, 907, 959, 1678
AjuI GAANNNNNNNTTGG 2 cut(s) 440, 472
AloI GAACNNNNNNTCC 2 cut(s) 1134, 1166
AluBI AGCT 3 cut(s) 95, 194, 998
AluI AGCT 3 cut(s) 95, 194, 998
Alw21I GWGCWC 1 cut(s) 204
Alw26I GTCTC 4 cut(s) 81, 960, 1092, 1451
Alw44I GTGCAC 1 cut(s) 200
AlwI GGATC 5 cut(s) 643, 1193, 1301, 1314, 1607
AlwNI CAGNNNCTG 1 cut(s) 395
Ama87I CYCGRG 3 cut(s) 185, 1296, 1345
AoxI GGCC 4 cut(s) 132, 841, 1084, 1654
ApaLI GTGCAC 1 cut(s) 200
ApeKI GCWGC 3 cut(s) 191, 650, 1024
ApoI RAATTY 1 cut(s) 603
AspLEI GCGC 1 cut(s) 166
AspS9I GGNCC 5 cut(s) 842, 963, 1004, 1085, 1570
AsuC2I CCSGG 3 cut(s) 171, 1346, 1347
AsuHPI GGTGA 3 cut(s) 251, 274, 896
AsuII TTCGAA 1 cut(s) 385
AvaI CYCGRG 3 cut(s) 185, 1296, 1345
AvaII GGWCC 3 cut(s) 963, 1004, 1570
AxyI CCTNAGG 2 cut(s) 558, 1506
BaeGI GKGCMC 1 cut(s) 204
BalI TGGCCA 1 cut(s) 1656
BamHI GGATCC 1 cut(s) 1306
BarI GAAGNNNNNNTAC 2 cut(s) 1176, 1208
BauI CACGAG 1 cut(s) 855
BbsI GAAGAC 2 cut(s) 372, 1430
Bbv12I GWGCWC 1 cut(s) 204
BbvI GCAGC 3 cut(s) 203, 637, 1011
BccI CCATC 5 cut(s) 578, 881, 1535, 1631, 1643
BceAI ACGGC 1 cut(s) 143
BcgI CGANNNNNNTGC 2 cut(s) 214, 248
BciT130I CCWGG 5 cut(s) 465, 808, 909, 961, 1680
BciVI GTATCC 2 cut(s) 494, 1046
BclI TGATCA 1 cut(s) 112
BcnI CCSGG 3 cut(s) 171, 1346, 1347
BcoDI GTCTC 4 cut(s) 81, 960, 1092, 1451
BfaI CTAG 2 cut(s) 351, 1617
BfuI GTATCC 2 cut(s) 494, 1046
BisI GCNGC 6 cut(s) 43, 167, 192, 651, 1025, 1512
BlpI GCTNAGC 1 cut(s) 1122
BlsI GCNGC 6 cut(s) 44, 168, 193, 652, 1026, 1513
Bme1390I CCNGG 8 cut(s) 171, 465, 808, 909, 961, 1346, 1347, 1680
Bme18I GGWCC 3 cut(s) 963, 1004, 1570
BmeT110I CYCGRG 3 cut(s) 185, 1296, 1345
BmgT120I GGNCC 5 cut(s) 842, 963, 1004, 1085, 1570
BmiI GGNNCC 2 cut(s) 1087, 1308
BmrFI CCNGG 8 cut(s) 171, 465, 808, 909, 961, 1346, 1347, 1680
BmsI GCATC 5 cut(s) 331, 365, 667, 1048, 1524
BpiI GAAGAC 2 cut(s) 372, 1430
BpmI CTGGAG 1 cut(s) 1136
Bpu10I CCTNAGC 1 cut(s) 96
Bpu1102I GCTNAGC 1 cut(s) 1122
Bpu14I TTCGAA 1 cut(s) 385
BpuEI CTTGAG 1 cut(s) 1200
BpuMI CCSGG 3 cut(s) 171, 1346, 1347
BsaJI CCNNGG 6 cut(s) 170, 806, 959, 1093, 1345, 1428
BsaWI WCCGGW 1 cut(s) 67
BsaXI ACNNNNNCTCC 2 cut(s) 1134, 1164
Bsc4I CCNNNNNNNGG 8 cut(s) 49, 326, 531, 749, 937, 1001, 1082, 1094
Bse1I ACTGG 2 cut(s) 1106, 1519
Bse21I CCTNAGG 2 cut(s) 558, 1506
BseBI CCWGG 5 cut(s) 465, 808, 909, 961, 1680
BseDI CCNNGG 6 cut(s) 170, 806, 959, 1093, 1345, 1428
BseGI GGATG 5 cut(s) 874, 1264, 1399, 1642, 1648
BseLI CCNNNNNNNGG 8 cut(s) 49, 326, 531, 749, 937, 1001, 1082, 1094
BseMII CTCAG 3 cut(s) 549, 1113, 1335
BseNI ACTGG 2 cut(s) 1106, 1519
BseRI GAGGAG 2 cut(s) 65, 118
BseSI GKGCMC 1 cut(s) 204
BseXI GCAGC 3 cut(s) 203, 637, 1011
BshFI GGCC 4 cut(s) 134, 843, 1086, 1656
BsiHKAI GWGCWC 1 cut(s) 204
BsiHKCI CYCGRG 3 cut(s) 185, 1296, 1345
BsiSI CCGG 3 cut(s) 68, 170, 1346
BslFI GGGAC 1 cut(s) 1463
BslI CCNNNNNNNGG 8 cut(s) 49, 326, 531, 749, 937, 1001, 1082, 1094
BsmAI GTCTC 4 cut(s) 81, 960, 1092, 1451
BsmFI GGGAC 1 cut(s) 1463
BsmI GAATGC 1 cut(s) 1514
BsnI GGCC 4 cut(s) 134, 843, 1086, 1656
BsoBI CYCGRG 3 cut(s) 185, 1296, 1345
Bsp119I TTCGAA 1 cut(s) 385
Bsp1286I GDGCHC 1 cut(s) 204
Bsp1407I TGTACA 1 cut(s) 1672
Bsp143I GATC 9 cut(s) 112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
Bsp1720I GCTNAGC 1 cut(s) 1122
BspACI CCGC 5 cut(s) 43, 167, 719, 1255, 1511
BspANI GGCC 4 cut(s) 134, 843, 1086, 1656
BspCNI CTCAG 3 cut(s) 550, 1114, 1334
BspHI TCATGA 1 cut(s) 508
BspLI GGNNCC 2 cut(s) 1087, 1308
BspPI GGATC 5 cut(s) 643, 1193, 1301, 1314, 1607
BspQI GCTCTTC 1 cut(s) 215
BspT104I TTCGAA 1 cut(s) 385
BsrGI TGTACA 1 cut(s) 1672
BsrI ACTGG 2 cut(s) 1106, 1519
BssECI CCNNGG 6 cut(s) 170, 806, 959, 1093, 1345, 1428
BssMI GATC 9 cut(s) 112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
BssSI CACGAG 1 cut(s) 855
BssT1I CCWWGG 2 cut(s) 1093, 1428
Bst2BI CACGAG 1 cut(s) 855
Bst2UI CCWGG 5 cut(s) 465, 808, 909, 961, 1680
Bst4CI ACNGT 4 cut(s) 436, 548, 574, 1146
Bst6I CTCTTC 5 cut(s) 215, 717, 807, 945, 1215
BstAUI TGTACA 1 cut(s) 1672
BstBI TTCGAA 1 cut(s) 385
BstDEI CTNAG 8 cut(s) 96, 360, 558, 738, 1122, 1321, 1506, 1691
BstENI CCTNNNNNAGG 1 cut(s) 529
BstF5I GGATG 5 cut(s) 874, 1264, 1399, 1642, 1648
BstHHI GCGC 1 cut(s) 166
BstKTI GATC 9 cut(s) 115, 184, 244, 638, 1201, 1309, 1581, 1591, 1602
BstMAI GTCTC 4 cut(s) 81, 960, 1092, 1451
BstMBI GATC 9 cut(s) 112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
BstMWI GCNNNNNNNGC 1 cut(s) 739
BstNI CCWGG 5 cut(s) 465, 808, 909, 961, 1680
BstSCI CCNGG 8 cut(s) 169, 463, 806, 907, 959, 1344, 1345, 1678
BstSLI GKGCMC 1 cut(s) 204
BstV1I GCAGC 3 cut(s) 203, 637, 1011
BstV2I GAAGAC 2 cut(s) 372, 1430
BstX2I RGATCY 3 cut(s) 635, 1198, 1306
BstXI CCANNNNNNTGG 2 cut(s) 142, 1019
BstYI RGATCY 3 cut(s) 635, 1198, 1306
Bsu36I CCTNAGG 2 cut(s) 558, 1506
BsuI GTATCC 2 cut(s) 494, 1046
BsuRI GGCC 4 cut(s) 134, 843, 1086, 1656
BtgZI GCGATG 1 cut(s) 1398
BtsCI GGATG 5 cut(s) 874, 1264, 1399, 1642, 1648
CaiI CAGNNNCTG 1 cut(s) 395
CciI TCATGA 1 cut(s) 508
CfoI GCGC 1 cut(s) 166
Cfr13I GGNCC 5 cut(s) 842, 963, 1004, 1085, 1570
Cfr9I CCCGGG 1 cut(s) 1345
CseI GACGC 1 cut(s) 1301
Csp6I GTAC 3 cut(s) 593, 1147, 1673
CviAII CATG 5 cut(s) 155, 490, 509, 946, 1414
CviQI GTAC 3 cut(s) 593, 1147, 1673
DdeI CTNAG 8 cut(s) 96, 360, 558, 738, 1122, 1321, 1506, 1691
DpnI GATC 9 cut(s) 114, 183, 243, 637, 1200, 1308, 1580, 1590, 1601
DpnII GATC 9 cut(s) 112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
EaeI YGGCCR 1 cut(s) 1654
Eam1104I CTCTTC 5 cut(s) 215, 717, 807, 945, 1215
EarI CTCTTC 5 cut(s) 215, 717, 807, 945, 1215
Eco130I CCWWGG 2 cut(s) 1093, 1428
Eco47I GGWCC 3 cut(s) 963, 1004, 1570
Eco81I CCTNAGG 2 cut(s) 558, 1506
Eco88I CYCGRG 3 cut(s) 185, 1296, 1345
EcoNI CCTNNNNNAGG 1 cut(s) 529
EcoRII CCWGG 5 cut(s) 463, 806, 907, 959, 1678
EcoT14I CCWWGG 2 cut(s) 1093, 1428
ErhI CCWWGG 2 cut(s) 1093, 1428
FaeI CATG 5 cut(s) 158, 493, 512, 949, 1417
FaqI GGGAC 1 cut(s) 1463
FatI CATG 5 cut(s) 154, 489, 508, 945, 1413
FauI CCCGC 1 cut(s) 1248
FbaI TGATCA 1 cut(s) 112
Fnu4HI GCNGC 6 cut(s) 43, 167, 192, 651, 1025, 1512
FokI GGATG 5 cut(s) 881, 1271, 1406, 1649, 1655
Fsp4HI GCNGC 6 cut(s) 43, 167, 192, 651, 1025, 1512
FspBI CTAG 2 cut(s) 351, 1617
GlaI GCGC 1 cut(s) 165
GluI GCNGC 6 cut(s) 43, 167, 192, 651, 1025, 1512
GsuI CTGGAG 1 cut(s) 1136
HaeIII GGCC 4 cut(s) 134, 843, 1086, 1656
HapII CCGG 3 cut(s) 68, 170, 1346
HgaI GACGC 1 cut(s) 1301
HhaI GCGC 1 cut(s) 166
Hin1II CATG 5 cut(s) 158, 493, 512, 949, 1417
Hin6I GCGC 1 cut(s) 164
HinP1I GCGC 1 cut(s) 164
HincII GTYRAC 2 cut(s) 895, 1378
HindII GTYRAC 2 cut(s) 895, 1378
HinfI GANTC 3 cut(s) 824, 953, 1213
HpaII CCGG 3 cut(s) 68, 170, 1346
HphI GGTGA 3 cut(s) 251, 274, 896
Hpy166II GTNNAC 5 cut(s) 202, 551, 895, 1378, 1421
Hpy188I TCNGA 7 cut(s) 117, 236, 940, 1324, 1336, 1593, 1630
Hpy8I GTNNAC 5 cut(s) 202, 551, 895, 1378, 1421
HpyAV CCTTC 6 cut(s) 640, 661, 1178, 1219, 1486, 1627
HpyCH4III ACNGT 4 cut(s) 436, 548, 574, 1146
HpyCH4V TGCA 8 cut(s) 202, 398, 529, 611, 680, 854, 1180, 1537
HpyF10VI GCNNNNNNNGC 1 cut(s) 739
HpyF3I CTNAG 8 cut(s) 96, 360, 558, 738, 1122, 1321, 1506, 1691
Hsp92II CATG 5 cut(s) 158, 493, 512, 949, 1417
HspAI GCGC 1 cut(s) 164
Ksp22I TGATCA 1 cut(s) 112
Kzo9I GATC 9 cut(s) 112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
LguI GCTCTTC 1 cut(s) 215
Lsp1109I GCAGC 3 cut(s) 203, 637, 1011
LweI GCATC 5 cut(s) 331, 365, 667, 1048, 1524
MaeI CTAG 2 cut(s) 351, 1617
MaeIII GTNAC 3 cut(s) 685, 1169, 1340
MalI GATC 9 cut(s) 114, 183, 243, 637, 1200, 1308, 1580, 1590, 1601
MboI GATC 9 cut(s) 112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
MfeI CAATTG 1 cut(s) 1277
MflI RGATCY 3 cut(s) 635, 1198, 1306
MhlI GDGCHC 1 cut(s) 204
MlsI TGGCCA 1 cut(s) 1656
MluCI AATT 2 cut(s) 603, 1277
MluNI TGGCCA 1 cut(s) 1656
MlyI GAGTC 2 cut(s) 962, 1207
MmeI TCCRAC 3 cut(s) 307, 613, 1036
Mox20I TGGCCA 1 cut(s) 1656
MscI TGGCCA 1 cut(s) 1656
MseI TTAA 3 cut(s) 423, 486, 1251
MslI CAYNNNNRTG 1 cut(s) 1662
Msp20I TGGCCA 1 cut(s) 1656
MspA1I CMGCKG 1 cut(s) 194
MspI CCGG 3 cut(s) 68, 170, 1346
MspR9I CCNGG 8 cut(s) 171, 465, 808, 909, 961, 1346, 1347, 1680
MunI CAATTG 1 cut(s) 1277
Mva1269I GAATGC 1 cut(s) 1514
MvaI CCWGG 5 cut(s) 465, 808, 909, 961, 1680
MwoI GCNNNNNNNGC 1 cut(s) 739
NciI CCSGG 3 cut(s) 171, 1346, 1347
NdeII GATC 9 cut(s) 112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
NlaIII CATG 5 cut(s) 158, 493, 512, 949, 1417
NlaIV GGNNCC 2 cut(s) 1087, 1308
NspV TTCGAA 1 cut(s) 385
PaeR7I CTCGAG 1 cut(s) 1296
PagI TCATGA 1 cut(s) 508
PciSI GCTCTTC 1 cut(s) 215
PctI GAATGC 1 cut(s) 1514
PfeI GAWTC 1 cut(s) 824
PflMI CCANNNNNTGG 3 cut(s) 326, 1001, 1082
PkrI GCNGC 6 cut(s) 44, 168, 193, 652, 1026, 1513
PleI GAGTC 2 cut(s) 961, 1207
PpsI GAGTC 2 cut(s) 961, 1207
Psp6I CCWGG 5 cut(s) 463, 806, 907, 959, 1678
PspGI CCWGG 5 cut(s) 463, 806, 907, 959, 1678
PspN4I GGNNCC 2 cut(s) 1087, 1308
PspPI GGNCC 5 cut(s) 842, 963, 1004, 1085, 1570
PstNI CAGNNNCTG 1 cut(s) 395
PsuI RGATCY 3 cut(s) 635, 1198, 1306
PvuII CAGCTG 1 cut(s) 194
RsaI GTAC 3 cut(s) 594, 1148, 1674
RsaNI GTAC 3 cut(s) 593, 1147, 1673
RseI CAYNNNNRTG 1 cut(s) 1662
SapI GCTCTTC 1 cut(s) 215
SaqAI TTAA 3 cut(s) 423, 486, 1251
SatI GCNGC 6 cut(s) 43, 167, 192, 651, 1025, 1512
Sau3AI GATC 9 cut(s) 112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
Sau96I GGNCC 5 cut(s) 842, 963, 1004, 1085, 1570
SchI GAGTC 2 cut(s) 962, 1207
ScrFI CCNGG 8 cut(s) 171, 465, 808, 909, 961, 1346, 1347, 1680
SduI GDGCHC 1 cut(s) 204
SfaNI GCATC 5 cut(s) 331, 365, 667, 1048, 1524
Sfr274I CTCGAG 1 cut(s) 1296
SfuI TTCGAA 1 cut(s) 385
SinI GGWCC 3 cut(s) 963, 1004, 1570
SlaI CTCGAG 1 cut(s) 1296
SmaI CCCGGG 1 cut(s) 1347
SmiMI CAYNNNNRTG 1 cut(s) 1662
SmlI CTYRAG 2 cut(s) 1215, 1296
SmoI CTYRAG 2 cut(s) 1215, 1296
Sse9I AATT 2 cut(s) 603, 1277
SsiI CCGC 5 cut(s) 43, 167, 719, 1255, 1511
SspMI CTAG 2 cut(s) 351, 1617
StyD4I CCNGG 8 cut(s) 169, 463, 806, 907, 959, 1344, 1345, 1678
StyI CCWWGG 2 cut(s) 1093, 1428
TaaI ACNGT 4 cut(s) 436, 548, 574, 1146
TaqI TCGA 4 cut(s) 216, 385, 1297, 1455
TasI AATT 2 cut(s) 603, 1277
TatI WGTACW 2 cut(s) 592, 1672
TauI GCSGC 3 cut(s) 45, 169, 1514
TfiI GAWTC 1 cut(s) 824
Tru1I TTAA 3 cut(s) 423, 486, 1251
Tru9I TTAA 3 cut(s) 423, 486, 1251
TseI GCWGC 3 cut(s) 191, 650, 1024
TspDTI ATGAA 8 cut(s) 17, 143, 780, 1005, 1047, 1430, 1500, 1680
TspMI CCCGGG 1 cut(s) 1345
Van91I CCANNNNNTGG 3 cut(s) 326, 1001, 1082
VneI GTGCAC 1 cut(s) 200
VpaK11BI GGWCC 3 cut(s) 963, 1004, 1570
XagI CCTNNNNNAGG 1 cut(s) 529
XapI RAATTY 1 cut(s) 603
XbaI TCTAGA 1 cut(s) 350
XhoI CTCGAG 1 cut(s) 1296
XmaI CCCGGG 1 cut(s) 1345
XspI CTAG 2 cut(s) 351, 1617
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.