Rmu_co8519839.1_g000001

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8519839.1
OG0000659
Physical Location & Seq
Forward (+)
957 .. 3134
2178 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8519839.1_g000001.1.cds

Sequence Viewer

Length: 1701 bp
atggctagcactagcagatggaaacagattttgtgcgggttggccttggttttttttgggttgtttcttggttcattcacttctccagcagaagctgccataaagaattaccaatttgatatacaagtgaagaatgtgagtagattgtgccatgcaaaacccattgttactgtaaacgggaggtttccggggccaactatttatgtaagggaaggagatagcgttcttgtcaatgttacaaaccatgctcaatataacatgtcaattcactggcatggattgaaacagtaccgaaatggttgggcggatggaccggcatatgtgacacagtgtcctatccagactgggaatagctacacctatgccttcaatgtaacaggccaaagaggaactttgtggtggcatgcacatattctttggctaagggccactgtctatggcgcaattgtcatcatgcctaaacaaggcaccccatttccttttccacagccatatagggaagccgaaattgtactaggagaatggtggaatgtggatgtcgaagaagttgtcaagcaaggaaacaacatgggcttgccgccaaattcctcagatgctcacaccatcaatggcaagccagggccattgtttccatgctccgagagacatacatatgtattagaggttgagcaagggaagacatacctgctgagaatcatcaacgcagccctcaacgacgtacttttctttggcattgctggtcacagcttgacagtagtggaggttgatgcagtttacacaaaaccattcactactcaagccatactaattgcaccaggccagaccacaaacgttctggtccaagccaatcaagtcccaaacagatacttcatggctgccaggcctttcatggatgttccaattccaatagacaacaagaccgccgcagccatactccaatacagaggagtccccaactctgttctaccaatccgtccccaacttccttcctctaatgacaccacctttgctttaggctacgagaataagctcaaaagtttaaacactccaaaattcccagcaaatgttccactcaaagttgacaaacacctgttctacactattggtttcggaaaagaatcttgcccaagttgccttaacggaacacgatttgttgcttccttgaacaatatctctttcgagatgccccaggttgcgcttttgcaagctcattacttcaacatcaaaggggtgtttaagactgactttcctgataagccaccgacttctttcaactatactggtgcaccactcacagccaatcttgggacttcaagtgccacccgactgagcaagattgcattcaactctacagttgagttggttttgcaggacaccaatcttctaacagtggagtcacatccattccatcttcatggatacaacttttttgttgttggaaccggtattgggaattttgatcctgccaaggacccagctaagtacaacttggttgatcctgttgagagaaataccgttgcggttcccaccggtggttggaccgccattcgtttcagagctgataatccaggcgtttggttcttgcactgtcatttggaacttcataccggatggggattgaaaacggcatttgttgtggaagatggaccaggcgcgtctcaatctgttctgcctccgcctaaggaccttccacaatgctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

566

Amino Acids

62.53

Weight (kDa)

8.61

Isoelectric Point (pI)

34.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000659)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03260
fragaria_vesca FvH4_1g13060 FvH4_2g08670 FvH4_2g08670 FvH4_2g08670 FvH4_2g08840 FvH4_2g08860 FvH4_2g09061
malus_domestica MD02G1145100.v1.1 MD05G1064600.v1.1 MD10G1073700.v1.1 MD15G1258600.v1.1 MD15G1259300.v1.1
prunus_persica Prupe.6G177700_v2.0.a1 Prupe.7G156500_v2.0.a1 Prupe.8G095000_v2.0.a1 Prupe.8G095400_v2.0.a1 Prupe.8G097000_v2.0.a1
pyrus_communis pycom02g11490 pycom05g05550 pycom15g22710
rosa_chinensis RchiOBHm_Chr2g0101231 RchiOBHm_Chr6g0264061 RchiOBHm_Chr6g0264101 RchiOBHm_Chr6g0264311 RchiOBHm_Chr6g0264361 RchiOBHm_Chr6g0264441 RchiOBHm_Chr6g0264891
rosa_laevigata RLG00000014229 RLG00000014253 RLG00000014265 RLG00000014267 RLG00000014269 RLG00000014291 RLG00000014292 RLG00000014316 RLG00000017063
rosa_multiflora Rmu_co8391921.1_g000001 Rmu_co8519839.1_g000001 Rmu_sc0000546.1_g000055 Rmu_sc0002305.1_g000003 Rmu_sc0004470.1_g000004 Rmu_sc0006314.1_g000014 Rmu_sc0009807.1_g000001 Rmu_sc0010483.1_g000004
rosa_roxburghii Rroxscaffold_175G00432050 Rroxscaffold_176G00431400 Rroxscaffold_176G00431740 Rroxscaffold_176G00431790 Rroxscaffold_7G00203140 Rroxscaffold_7G00203620
rosa_rugosa Rorug02G0100200 Rorug06G0007600 Rorug06G0012500 Rorug06G0012600 Rorug06G0014100
rosa_samantha Rh2BG150700 Rh2DG150800 Rh6AG128900 Rh6AG131700 Rh6BG124500 Rh6BG124800 Rh6BG128400 Rh6BG129400 Rh6BG132600 Rh6CG123100 Rh6DG110500 Rh6DG113900 Rh6DG114900 Rh6DG118200
rosa_wichuraiana Rw2G011330 Rw6G011140 Rw6G011160 Rw6G011480 Rw6G011540 Rw6G011680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 693
AccB1I GGYRCC 1 cut(s) 467
AccII CGCG 1 cut(s) 1655
AciI CCGC 8 cut(s) 36, 305, 578, 921, 924, 1520, 1542, 1676
AclI AACGTT 1 cut(s) 831
AclWI GGATC 2 cut(s) 1454, 1490
AcsI RAATTY 3 cut(s) 583, 1052, 1453
AfaI GTAC 4 cut(s) 290, 513, 720, 1484
AfiI CCNNNNNNNGG 5 cut(s) 464, 1305, 1449, 1532, 1536
AflIII ACRYGT 1 cut(s) 258
AgeI ACCGGT 2 cut(s) 1442, 1529
AgsI TTSAA 8 cut(s) 283, 370, 1165, 1219, 1273, 1314, 1345, 1621
AhdI GACNNNNNGTC 1 cut(s) 330
AjnI CCWGG 6 cut(s) 616, 814, 878, 1188, 1567, 1648
AloI GAACNNNNNNTCC 2 cut(s) 207, 239
AluBI AGCT 7 cut(s) 95, 354, 747, 1030, 1208, 1478, 1559
AluI AGCT 7 cut(s) 95, 354, 747, 1030, 1208, 1478, 1559
Alw21I GWGCWC 1 cut(s) 1288
Alw26I GTCTC 2 cut(s) 637, 1662
Alw44I GTGCAC 1 cut(s) 1284
AlwI GGATC 2 cut(s) 1454, 1490
AlwNI CAGNNNCTG 1 cut(s) 95
AoxI GGCC 7 cut(s) 42, 191, 379, 426, 620, 817, 881
ApaLI GTGCAC 1 cut(s) 1284
ApeKI GCWGC 4 cut(s) 95, 704, 875, 926
ApoI RAATTY 3 cut(s) 583, 1052, 1453
ArsI GACNNNNNNTTYG 4 cut(s) 534, 566, 989, 1021
AsiGI ACCGGT 2 cut(s) 1442, 1529
AspLEI GCGC 3 cut(s) 443, 1198, 1655
AspS9I GGNCC 9 cut(s) 191, 311, 426, 620, 838, 1471, 1539, 1646, 1684
AsuC2I CCSGG 1 cut(s) 189
AsuNHI GCTAGC 1 cut(s) 5
AvaII GGWCC 6 cut(s) 311, 838, 1471, 1539, 1646, 1684
AxyI CCTNAGG 1 cut(s) 1680
BaeGI GKGCMC 1 cut(s) 1288
BanI GGYRCC 1 cut(s) 467
BbsI GAAGAC 1 cut(s) 683
Bbv12I GWGCWC 1 cut(s) 1288
BbvI GCAGC 4 cut(s) 82, 716, 862, 938
BccI CCATC 6 cut(s) 12, 302, 611, 1416, 1605, 1637
BceAI ACGGC 1 cut(s) 1641
BciT130I CCWGG 6 cut(s) 618, 816, 880, 1190, 1569, 1650
BciVI GTATCC 1 cut(s) 1412
BcnI CCSGG 1 cut(s) 189
BcoDI GTCTC 2 cut(s) 637, 1662
BfaI CTAG 3 cut(s) 6, 12, 515
BfmI CTRYAG 1 cut(s) 1350
BfuAI ACCTGC 1 cut(s) 693
BfuI GTATCC 1 cut(s) 1412
BisI GCNGC 6 cut(s) 96, 578, 705, 876, 924, 927
BlsI GCNGC 6 cut(s) 97, 579, 706, 877, 925, 928
Bme1390I CCNGG 7 cut(s) 189, 618, 816, 880, 1190, 1569, 1650
Bme18I GGWCC 6 cut(s) 311, 838, 1471, 1539, 1646, 1684
BmeRI GACNNNNNGTC 1 cut(s) 330
BmgT120I GGNCC 9 cut(s) 191, 311, 426, 620, 838, 1471, 1539, 1646, 1684
BmiI GGNNCC 5 cut(s) 192, 469, 1441, 1473, 1524
BmrFI CCNGG 7 cut(s) 189, 618, 816, 880, 1190, 1569, 1650
BmrI ACTGGG 1 cut(s) 354
BmsI GCATC 3 cut(s) 583, 757, 1173
BmtI GCTAGC 1 cut(s) 9
BmuI ACTGGG 1 cut(s) 354
BpiI GAAGAC 1 cut(s) 683
BpmI CTGGAG 1 cut(s) 69
Bpu10I CCTNAGC 1 cut(s) 422
BpuEI CTTGAG 1 cut(s) 780
BpuMI CCSGG 1 cut(s) 189
BsaJI CCNNGG 5 cut(s) 45, 188, 617, 1188, 1467
BsaWI WCCGGW 3 cut(s) 1442, 1529, 1607
BsaXI ACNNNNNCTCC 2 cut(s) 207, 237
Bsc4I CCNNNNNNNGG 5 cut(s) 464, 1305, 1449, 1532, 1536
Bse118I RCCGGY 3 cut(s) 313, 1442, 1529
Bse1I ACTGG 3 cut(s) 275, 349, 1285
Bse21I CCTNAGG 1 cut(s) 1680
Bse3DI GCAATG 1 cut(s) 732
BseBI CCWGG 6 cut(s) 618, 816, 880, 1190, 1569, 1650
BseDI CCNNGG 5 cut(s) 45, 188, 617, 1188, 1467
BseGI GGATG 5 cut(s) 313, 541, 898, 1399, 1616
BseLI CCNNNNNNNGG 5 cut(s) 464, 1305, 1449, 1532, 1536
BseMI GCAATG 1 cut(s) 732
BseMII CTCAG 3 cut(s) 603, 680, 1319
BseNI ACTGG 3 cut(s) 275, 349, 1285
BseRI GAGGAG 1 cut(s) 960
BseSI GKGCMC 1 cut(s) 1288
BseXI GCAGC 4 cut(s) 82, 716, 862, 938
BseYI CCCAGC 2 cut(s) 1057, 1474
Bsh1236I CGCG 1 cut(s) 1655
BshFI GGCC 7 cut(s) 44, 193, 381, 428, 622, 819, 883
BshNI GGYRCC 1 cut(s) 467
BshTI ACCGGT 2 cut(s) 1442, 1529
BsiHKAI GWGCWC 1 cut(s) 1288
BsiSI CCGG 5 cut(s) 188, 314, 1443, 1530, 1608
BslFI GGGAC 4 cut(s) 839, 935, 960, 1321
BslI CCNNNNNNNGG 5 cut(s) 464, 1305, 1449, 1532, 1536
BsmAI GTCTC 2 cut(s) 637, 1662
BsmBI CGTCTC 1 cut(s) 1662
BsmFI GGGAC 4 cut(s) 839, 935, 960, 1321
BsmI GAATGC 1 cut(s) 1340
BsnI GGCC 7 cut(s) 44, 193, 381, 428, 622, 819, 883
Bsp1286I GDGCHC 1 cut(s) 1288
Bsp143I GATC 2 cut(s) 1459, 1495
BspACI CCGC 8 cut(s) 36, 305, 578, 921, 924, 1520, 1542, 1676
BspANI GGCC 7 cut(s) 44, 193, 381, 428, 622, 819, 883
BspCNI CTCAG 3 cut(s) 602, 681, 1320
BspFNI CGCG 1 cut(s) 1655
BspLI GGNNCC 5 cut(s) 192, 469, 1441, 1473, 1524
BspMI ACCTGC 1 cut(s) 693
BspOI GCTAGC 1 cut(s) 9
BspPI GGATC 2 cut(s) 1454, 1490
BspT107I GGYRCC 1 cut(s) 467
BsrDI GCAATG 1 cut(s) 732
BsrFI RCCGGY 3 cut(s) 313, 1442, 1529
BsrI ACTGG 3 cut(s) 275, 349, 1285
BssAI RCCGGY 3 cut(s) 313, 1442, 1529
BssECI CCNNGG 5 cut(s) 45, 188, 617, 1188, 1467
BssMI GATC 2 cut(s) 1459, 1495
BssT1I CCWWGG 2 cut(s) 45, 1467
Bst2UI CCWGG 6 cut(s) 618, 816, 880, 1190, 1569, 1650
Bst4CI ACNGT 9 cut(s) 172, 288, 330, 433, 754, 1354, 1390, 1516, 1589
BstAPI GCANNNNNTGC 1 cut(s) 95
BstC8I GCNNGC 5 cut(s) 7, 405, 575, 614, 1206
BstDEI CTNAG 6 cut(s) 422, 589, 689, 1328, 1479, 1680
BstENI CCTNNNNNAGG 1 cut(s) 462
BstF5I GGATG 5 cut(s) 313, 541, 898, 1399, 1616
BstFNI CGCG 1 cut(s) 1655
BstHHI GCGC 3 cut(s) 443, 1198, 1655
BstKTI GATC 2 cut(s) 1462, 1498
BstMAI GTCTC 2 cut(s) 637, 1662
BstMBI GATC 2 cut(s) 1459, 1495
BstMWI GCNNNNNNNGC 2 cut(s) 95, 1131
BstNI CCWGG 6 cut(s) 618, 816, 880, 1190, 1569, 1650
BstNSI RCATGY 2 cut(s) 262, 407
BstSCI CCNGG 7 cut(s) 187, 616, 814, 878, 1188, 1567, 1648
BstSFI CTRYAG 1 cut(s) 1350
BstSLI GKGCMC 1 cut(s) 1288
BstUI CGCG 1 cut(s) 1655
BstV1I GCAGC 4 cut(s) 82, 716, 862, 938
BstV2I GAAGAC 1 cut(s) 683
BstXI CCANNNNNNTGG 2 cut(s) 1415, 1575
Bsu36I CCTNAGG 1 cut(s) 1680
BsuI GTATCC 1 cut(s) 1412
BsuRI GGCC 7 cut(s) 44, 193, 381, 428, 622, 819, 883
BtsCI GGATG 5 cut(s) 313, 541, 898, 1399, 1616
BtsIMutI CAGTG 5 cut(s) 268, 335, 429, 1395, 1585
BveI ACCTGC 1 cut(s) 693
Cac8I GCNNGC 5 cut(s) 7, 405, 575, 614, 1206
CaiI CAGNNNCTG 1 cut(s) 95
CfoI GCGC 3 cut(s) 443, 1198, 1655
Cfr10I RCCGGY 3 cut(s) 313, 1442, 1529
Cfr13I GGNCC 9 cut(s) 191, 311, 426, 620, 838, 1471, 1539, 1646, 1684
CseI GACGC 1 cut(s) 1644
Csp6I GTAC 4 cut(s) 289, 512, 719, 1483
CspAI ACCGGT 2 cut(s) 1442, 1529
CviQI GTAC 4 cut(s) 289, 512, 719, 1483
DdeI CTNAG 6 cut(s) 422, 589, 689, 1328, 1479, 1680
DpnI GATC 2 cut(s) 1461, 1497
DpnII GATC 2 cut(s) 1459, 1495
DraI TTTAAA 1 cut(s) 1041
DriI GACNNNNNGTC 1 cut(s) 330
Eam1105I GACNNNNNGTC 1 cut(s) 330
EciI GGCGGA 2 cut(s) 320, 1665
Eco130I CCWWGG 2 cut(s) 45, 1467
Eco147I AGGCCT 1 cut(s) 883
Eco47I GGWCC 6 cut(s) 311, 838, 1471, 1539, 1646, 1684
Eco81I CCTNAGG 1 cut(s) 1680
EcoNI CCTNNNNNAGG 1 cut(s) 462
EcoO109I RGGNCCY 2 cut(s) 1471, 1684
EcoRII CCWGG 6 cut(s) 616, 814, 878, 1188, 1567, 1648
EcoT14I CCWWGG 2 cut(s) 45, 1467
ErhI CCWWGG 2 cut(s) 45, 1467
Esp3I CGTCTC 1 cut(s) 1662
FalI AAGNNNNNCTT 6 cut(s) 376, 408, 1229, 1261, 1472, 1504
FaqI GGGAC 4 cut(s) 839, 935, 960, 1321
FauI CCCGC 1 cut(s) 29
FauNDI CATATG 2 cut(s) 319, 652
Fnu4HI GCNGC 6 cut(s) 96, 578, 705, 876, 924, 927
FokI GGATG 5 cut(s) 320, 548, 905, 1386, 1623
Fsp4HI GCNGC 6 cut(s) 96, 578, 705, 876, 924, 927
FspBI CTAG 3 cut(s) 6, 12, 515
GlaI GCGC 3 cut(s) 442, 1197, 1654
GluI GCNGC 6 cut(s) 96, 578, 705, 876, 924, 927
GsaI CCCAGC 2 cut(s) 1061, 1478
GsuI CTGGAG 1 cut(s) 69
HaeIII GGCC 7 cut(s) 44, 193, 381, 428, 622, 819, 883
HapII CCGG 5 cut(s) 188, 314, 1443, 1530, 1608
HgaI GACGC 1 cut(s) 1644
HhaI GCGC 3 cut(s) 443, 1198, 1655
Hin6I GCGC 3 cut(s) 441, 1196, 1653
HinP1I GCGC 3 cut(s) 441, 1196, 1653
HincII GTYRAC 1 cut(s) 1081
HindII GTYRAC 1 cut(s) 1081
HinfI GANTC 4 cut(s) 693, 948, 1118, 1394
HpaII CCGG 5 cut(s) 188, 314, 1443, 1530, 1608
Hpy166II GTNNAC 4 cut(s) 175, 775, 1081, 1286
Hpy188I TCNGA 4 cut(s) 592, 640, 1112, 1556
Hpy188III TCNNGA 3 cut(s) 340, 1180, 1250
Hpy8I GTNNAC 4 cut(s) 175, 775, 1081, 1286
Hpy99I CGWCG 1 cut(s) 719
HpyAV CCTTC 4 cut(s) 206, 376, 996, 1697
HpyCH4III ACNGT 9 cut(s) 172, 288, 330, 433, 754, 1354, 1390, 1516, 1589
HpyCH4IV ACGT 2 cut(s) 717, 831
HpyCH4V TGCA 9 cut(s) 155, 407, 770, 812, 1204, 1286, 1340, 1369, 1585
HpyF10VI GCNNNNNNNGC 2 cut(s) 95, 1131
HpyF3I CTNAG 6 cut(s) 422, 589, 689, 1328, 1479, 1680
HpySE526I ACGT 2 cut(s) 717, 831
HspAI GCGC 3 cut(s) 441, 1196, 1653
Kzo9I GATC 2 cut(s) 1459, 1495
LmnI GCTCC 1 cut(s) 641
Lsp1109I GCAGC 4 cut(s) 82, 716, 862, 938
LweI GCATC 3 cut(s) 583, 757, 1173
MaeI CTAG 3 cut(s) 6, 12, 515
MaeII ACGT 2 cut(s) 717, 831
MaeIII GTNAC 6 cut(s) 166, 235, 322, 373, 740, 1395
MalI GATC 2 cut(s) 1461, 1497
MboI GATC 2 cut(s) 1459, 1495
MboII GAAGA 6 cut(s) 142, 554, 688, 1373, 1403, 1652
MfeI CAATTG 1 cut(s) 444
MhlI GDGCHC 1 cut(s) 1288
MlyI GAGTC 2 cut(s) 957, 1403
MmeI TCCRAC 2 cut(s) 1417, 1517
MnlI CCTC 9 cut(s) 174, 380, 598, 655, 719, 754, 938, 1000, 1683
MseI TTAA 3 cut(s) 1040, 1137, 1236
MslI CAYNNNNRTG 3 cut(s) 273, 651, 1413
MspI CCGG 5 cut(s) 188, 314, 1443, 1530, 1608
MspR9I CCNGG 7 cut(s) 189, 618, 816, 880, 1190, 1569, 1650
MssI GTTTAAAC 1 cut(s) 1041
MunI CAATTG 1 cut(s) 444
Mva1269I GAATGC 1 cut(s) 1340
MvaI CCWGG 6 cut(s) 618, 816, 880, 1190, 1569, 1650
MvnI CGCG 1 cut(s) 1655
MwoI GCNNNNNNNGC 2 cut(s) 95, 1131
NciI CCSGG 1 cut(s) 189
NdeI CATATG 2 cut(s) 319, 652
NdeII GATC 2 cut(s) 1459, 1495
NheI GCTAGC 1 cut(s) 5
NlaIV GGNNCC 5 cut(s) 192, 469, 1441, 1473, 1524
NmuCI GTSAC 3 cut(s) 322, 740, 1395
NspI RCATGY 2 cut(s) 262, 407
PaeI GCATGC 1 cut(s) 407
PceI AGGCCT 1 cut(s) 883
PciI ACATGT 1 cut(s) 258
PctI GAATGC 1 cut(s) 1340
PfeI GAWTC 2 cut(s) 693, 1118
PinAI ACCGGT 2 cut(s) 1442, 1529
PkrI GCNGC 6 cut(s) 97, 579, 706, 877, 925, 928
PleI GAGTC 2 cut(s) 956, 1402
PmeI GTTTAAAC 1 cut(s) 1041
PpsI GAGTC 2 cut(s) 956, 1402
PpuMI RGGWCCY 2 cut(s) 1471, 1684
PscI ACATGT 1 cut(s) 258
Psp1406I AACGTT 1 cut(s) 831
Psp5II RGGWCCY 2 cut(s) 1471, 1684
Psp6I CCWGG 6 cut(s) 616, 814, 878, 1188, 1567, 1648
PspFI CCCAGC 2 cut(s) 1057, 1474
PspGI CCWGG 6 cut(s) 616, 814, 878, 1188, 1567, 1648
PspN4I GGNNCC 5 cut(s) 192, 469, 1441, 1473, 1524
PspPI GGNCC 9 cut(s) 191, 311, 426, 620, 838, 1471, 1539, 1646, 1684
PspPPI RGGWCCY 2 cut(s) 1471, 1684
PstNI CAGNNNCTG 1 cut(s) 95
RsaI GTAC 4 cut(s) 290, 513, 720, 1484
RsaNI GTAC 4 cut(s) 289, 512, 719, 1483
RseI CAYNNNNRTG 3 cut(s) 273, 651, 1413
SaqAI TTAA 3 cut(s) 1040, 1137, 1236
SatI GCNGC 6 cut(s) 96, 578, 705, 876, 924, 927
Sau3AI GATC 2 cut(s) 1459, 1495
Sau96I GGNCC 9 cut(s) 191, 311, 426, 620, 838, 1471, 1539, 1646, 1684
SchI GAGTC 2 cut(s) 957, 1403
ScrFI CCNGG 7 cut(s) 189, 618, 816, 880, 1190, 1569, 1650
SduI GDGCHC 1 cut(s) 1288
SfaNI GCATC 3 cut(s) 583, 757, 1173
SfcI CTRYAG 1 cut(s) 1350
SgrAI CRCCGGYG 1 cut(s) 1529
SinI GGWCC 6 cut(s) 311, 838, 1471, 1539, 1646, 1684
SmiMI CAYNNNNRTG 3 cut(s) 273, 651, 1413
SmlI CTYRAG 1 cut(s) 795
SmoI CTYRAG 1 cut(s) 795
SphI GCATGC 1 cut(s) 407
SseBI AGGCCT 1 cut(s) 883
SsiI CCGC 8 cut(s) 36, 305, 578, 921, 924, 1520, 1542, 1676
SspMI CTAG 3 cut(s) 6, 12, 515
StuI AGGCCT 1 cut(s) 883
StyD4I CCNGG 7 cut(s) 187, 616, 814, 878, 1188, 1567, 1648
StyI CCWWGG 2 cut(s) 45, 1467
TaaI ACNGT 9 cut(s) 172, 288, 330, 433, 754, 1354, 1390, 1516, 1589
TaiI ACGT 2 cut(s) 720, 834
TaqI TCGA 2 cut(s) 540, 1179
TatI WGTACW 2 cut(s) 511, 1482
TauI GCSGC 2 cut(s) 580, 926
TfiI GAWTC 2 cut(s) 693, 1118
Tru1I TTAA 3 cut(s) 1040, 1137, 1236
Tru9I TTAA 3 cut(s) 1040, 1137, 1236
TscAI CASTG 5 cut(s) 275, 335, 436, 1395, 1592
TseFI GTSAC 3 cut(s) 322, 740, 1395
TseI GCWGC 4 cut(s) 95, 704, 875, 926
Tsp45I GTSAC 3 cut(s) 322, 740, 1395
TspDTI ATGAA 5 cut(s) 63, 859, 877, 1403, 1592
TspGWI ACGGA 2 cut(s) 962, 1155
TspRI CASTG 5 cut(s) 275, 335, 436, 1395, 1592
VneI GTGCAC 1 cut(s) 1284
VpaK11BI GGWCC 6 cut(s) 311, 838, 1471, 1539, 1646, 1684
XagI CCTNNNNNAGG 1 cut(s) 462
XapI RAATTY 3 cut(s) 583, 1052, 1453
XceI RCATGY 2 cut(s) 262, 407
XcmI CCANNNNNNNNNTGG 2 cut(s) 832, 886
XspI CTAG 3 cut(s) 6, 12, 515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.