Rroxscaffold_7G00203620

Belongs to the multicopper oxidase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000659
Physical Location & Seq
Forward (+)
52516878 .. 52520521
3644 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00203620.1

Sequence Viewer

Length: 1956 bp
ATGCAACCTCTGCAATTTCTACCTACTGTTGACAACACCACCTCCATCTTACAAACGGATACCAAAGCTGCTGTGAAGTCATACCAATTTGACATTCAAGTGAAGAATGTGAGCAGGTTGTGCCATTCTAAGCCAATTGTTACAGTAAATGGGTTGTTCCCTGGACCTACAATTTATGCTAGAGAAGGAGATACAGTTCTAGTTAATGTCACCAATCATGCCCAGTATAACATGTCAATTCATTGGCATGGACTAAAGCAATACAGGAATGGGTGGGCAGATGGACCTGCTTATATCACACAATGTCCAATCAAGACAGGAAACAGTTACACCTACAATATGACAATCACAGGGCAAAGAGGAACTCTATGGTGGCATGCTCACATCTTTTGGCTACGAGCCACTGTATACGGAGCTATTGTCATCATGCCCAAACAAGGCACTCCATTTCCTTTTCCTCAGCCTTACAGAGAAGCTAATATTGTCTTAGGAGAATGGTGGAATAATGATGTTGAAGAGGTTGTGAAACAAGGGAACAGACTGGGATTGCCTCCGAATATGTCAGATGCACATACCATTAATGGGAAGCCAGGGCCGCTCTTCCCATGTTCTGAAAAACATACCTTTGCAATGGAGGTTGAACAGGGAAAGACTTACCTGCTACGGATCATCAATGCTGCACTCAATGACGAGCTATTCTTTGCCATAGCCGGCCACAACTTGACAGTGGTAGAGATTGATGCAGTCTATACCAAACCATTTACATCTCAGGCAATACTAATAGCACCAGGCCAGACCACCAACGTTCTTGTTCAGGCAAACCAAGTCCCCAGTAGATACTTCATGGCTGCAAGGCCATTCATGGATGCACCTCTTTCCATAGACAATAAGACCGCCACTGCAATCCTTCAATATAAAGGCATCCCCAATTCTGTTCTGCCAGTTCTTTCCCAACTTCCAGCACTCAATGACACAGCTTTTGTGCTGAGCTACAATGCAAAGCTGAGAAGCCTAAACACAGCAAAGTACCCAGCAAATGTACCTCTAAAAGTCGATAGACAGCTTTTTTACACAATTGGTTTAGGAATCAACCAATGCACAACTTGCCTGAATGGAACACAGCTCACTGCTTCTTTGAACAACATCACTTTCGTGATGCCCCAAATCGGGCTGCTTCAAGCTCATTACTCCAACACCAAGGGGGTATTTACCACAGACTTCCCTGACCGTCCTCCAACAGCTTTCAATTATACTGGTGCACTACTCACTGCCAACCTTGGAACTAAACTAGGCACCCGACTAAGCAAGATCGCATTTAACTCAACCGTAGAGTTGGTGCTACAAGATACCAATCTTCTGACTGTGGAATCCCATCCATTCCACCTTCATGGTTACAATTTTTTCATTGTTGGGACTGGAGTTGGGAACTTCGACCCCAAGAAGGACCCAGCTAAGTTTAACTTGGTGGATCCTCCTGAAAGAAACACAGTTGGAGTTCCCACCGGTGGTTGGGCTGCCATAAGATTCAGGGCTGACAATCCAGGTGTGTGGTTCATGCACTGTCACTTGGAGCTGCATACCAGCTGGGGTTTGAAGACTGCATTTGTGGTAGAAAATGGGAAAGGTTCAGATCAATCTGTCTTGCCTCCACCTGCAGACCTTCCACCTTCCGAGCCGAAGAGGACTTCCGCAACCCGAAAAGGTGCGGAAGTCCCGCAGCAGAGAAGGCGGCAATGGCGGCGCTCGCGGTTGCTAGACAAACCCTCCGGACATCCCGGCGGCTTGCAGTTGGGTGGACTCGCCGGCTACCACTTTCCCGCCGACCTTGATAGACTACCGTTTTGCGCCGACTACGCCGCCCGTACCTCCGACCTCGATCTCTTGGCCTTCGTCTTCACCGCAAAGTGGTCCGAGATGCCCTTGGCCTCCGTCCGGCAAGAGGTGAGCCGCCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3 Pectinesterase

Protein Analysis

651

Amino Acids

72.17

Weight (kDa)

9.19

Isoelectric Point (pI)

39.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 32 - 146 5.9e-42 Multicopper oxidase
Cu-oxidase PF00394 160 - 307 3.5e-43 Multicopper oxidase
Cu-oxidase_2 PF07731 406 - 540 1.6e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000659)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03260
fragaria_vesca FvH4_1g13060 FvH4_2g08670 FvH4_2g08670 FvH4_2g08670 FvH4_2g08840 FvH4_2g08860 FvH4_2g09061
malus_domestica MD02G1145100.v1.1 MD05G1064600.v1.1 MD10G1073700.v1.1 MD15G1258600.v1.1 MD15G1259300.v1.1
prunus_persica Prupe.6G177700_v2.0.a1 Prupe.7G156500_v2.0.a1 Prupe.8G095000_v2.0.a1 Prupe.8G095400_v2.0.a1 Prupe.8G097000_v2.0.a1
pyrus_communis pycom02g11490 pycom05g05550 pycom15g22710
rosa_chinensis RchiOBHm_Chr2g0101231 RchiOBHm_Chr6g0264061 RchiOBHm_Chr6g0264101 RchiOBHm_Chr6g0264311 RchiOBHm_Chr6g0264361 RchiOBHm_Chr6g0264441 RchiOBHm_Chr6g0264891
rosa_laevigata RLG00000014229 RLG00000014253 RLG00000014265 RLG00000014267 RLG00000014269 RLG00000014291 RLG00000014292 RLG00000014316 RLG00000017063
rosa_multiflora Rmu_co8391921.1_g000001 Rmu_co8519839.1_g000001 Rmu_sc0000546.1_g000055 Rmu_sc0002305.1_g000003 Rmu_sc0004470.1_g000004 Rmu_sc0006314.1_g000014 Rmu_sc0009807.1_g000001 Rmu_sc0010483.1_g000004
rosa_roxburghii Rroxscaffold_175G00432050 Rroxscaffold_176G00431400 Rroxscaffold_176G00431740 Rroxscaffold_176G00431790 Rroxscaffold_7G00203140 Rroxscaffold_7G00203620
rosa_rugosa Rorug02G0100200 Rorug06G0007600 Rorug06G0012500 Rorug06G0012600 Rorug06G0014100
rosa_samantha Rh2BG150700 Rh2DG150800 Rh6AG128900 Rh6AG131700 Rh6BG124500 Rh6BG124800 Rh6BG128400 Rh6BG129400 Rh6BG132600 Rh6CG123100 Rh6DG110500 Rh6DG113900 Rh6DG114900 Rh6DG118200
rosa_wichuraiana Rw2G011330 Rw6G011140 Rw6G011160 Rw6G011480 Rw6G011540 Rw6G011680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1660
Acc36I ACCTGC 4 cut(s) 105, 295, 666, 1660
AccB1I GGYRCC 1 cut(s) 1292
AccBSI CCGCTC 1 cut(s) 598
AccI GTMKAC 1 cut(s) 408
AccII CGCG 1 cut(s) 1747
AccIII TCCGGA 1 cut(s) 1766
AclI AACGTT 1 cut(s) 804
AclWI GGATC 3 cut(s) 674, 1463, 1476
AcoI YGGCCR 1 cut(s) 712
AfaI GTAC 3 cut(s) 1028, 1041, 1864
AflIII ACRYGT 1 cut(s) 231
AgeI ACCGGT 1 cut(s) 1502
AgsI TTSAA 8 cut(s) 98, 515, 641, 911, 1138, 1178, 1246, 1594
AjnI CCWGG 4 cut(s) 160, 589, 787, 1540
AjuI GAANNNNNNNTTGG 2 cut(s) 78, 110
AleI CACNNNNGTG 1 cut(s) 1151
AloI GAACNNNNNNTCC 2 cut(s) 180, 212
Alw21I GWGCWC 1 cut(s) 1261
Alw44I GTGCAC 1 cut(s) 1257
AlwI GGATC 3 cut(s) 674, 1463, 1476
Aor13HI TCCGGA 1 cut(s) 1766
AoxI GGCC 6 cut(s) 593, 712, 790, 854, 1884, 1923
ApaLI GTGCAC 1 cut(s) 1257
ApeKI GCWGC 7 cut(s) 68, 677, 848, 1171, 1514, 1573, 1717
ArsI GACNNNNNNTTYG 4 cut(s) 962, 994, 1824, 1856
AseI ATTAAT 1 cut(s) 579
AsiGI ACCGGT 1 cut(s) 1502
AspLEI GCGC 2 cut(s) 1743, 1847
AspS9I GGNCC 5 cut(s) 164, 284, 593, 1444, 1908
AsuC2I CCSGG 1 cut(s) 1776
AsuHPI GGTGA 3 cut(s) 202, 1888, 1954
AvaII GGWCC 4 cut(s) 164, 284, 1444, 1908
BaeGI GKGCMC 1 cut(s) 1261
BamHI GGATCC 1 cut(s) 1468
BanI GGYRCC 1 cut(s) 1292
BbsI GAAGAC 2 cut(s) 1601, 1885
Bbv12I GWGCWC 1 cut(s) 1261
BbvCI CCTCAGC 1 cut(s) 459
BbvI GCAGC 7 cut(s) 55, 664, 835, 1158, 1501, 1560, 1729
BccI CCATC 3 cut(s) 53, 275, 1380
BceAI ACGGC 1 cut(s) 1935
BciT130I CCWGG 4 cut(s) 162, 591, 789, 1542
BciVI GTATCC 1 cut(s) 52
BcnI CCSGG 1 cut(s) 1776
BfaI CTAG 4 cut(s) 180, 200, 1289, 1754
BfmI CTRYAG 1 cut(s) 1653
BfoI RGCGCY 1 cut(s) 1744
BfuAI ACCTGC 4 cut(s) 105, 295, 666, 1660
BfuI GTATCC 1 cut(s) 52
BlpI GCTNAGC 1 cut(s) 986
Bme1390I CCNGG 5 cut(s) 162, 591, 789, 1542, 1776
Bme18I GGWCC 4 cut(s) 164, 284, 1444, 1908
BmgT120I GGNCC 5 cut(s) 164, 284, 593, 1444, 1908
BmiI GGNNCC 3 cut(s) 1294, 1446, 1470
BmrFI CCNGG 5 cut(s) 162, 591, 789, 1542, 1776
BmrI ACTGGG 3 cut(s) 217, 551, 825
BmsI GCATC 6 cut(s) 556, 730, 856, 930, 1146, 1905
BmuI ACTGGG 3 cut(s) 217, 551, 825
BpiI GAAGAC 2 cut(s) 1601, 1885
BpmI CTGGAG 1 cut(s) 1437
Bpu10I CCTNAGC 1 cut(s) 459
Bpu1102I GCTNAGC 1 cut(s) 986
BpuMI CCSGG 1 cut(s) 1776
BsaBI GATNNNNATC 1 cut(s) 1350
BsaJI CCNNGG 5 cut(s) 160, 590, 1197, 1276, 1920
BsaWI WCCGGW 2 cut(s) 1502, 1766
BsaXI ACNNNNNCTCC 8 cut(s) 26, 56, 180, 210, 405, 435, 1748, 1778
Bse118I RCCGGY 3 cut(s) 710, 1502, 1802
Bse1I ACTGG 6 cut(s) 223, 546, 831, 941, 1258, 1420
Bse3DI GCAATG 2 cut(s) 636, 1739
Bse8I GATNNNNATC 1 cut(s) 1350
BseAI TCCGGA 1 cut(s) 1766
BseBI CCWGG 4 cut(s) 162, 591, 789, 1542
BseDI CCNNGG 5 cut(s) 160, 590, 1197, 1276, 1920
BseGI GGATG 4 cut(s) 871, 921, 1372, 1771
BseJI GATNNNNATC 1 cut(s) 1350
BseMI GCAATG 2 cut(s) 636, 1739
BseMII CTCAG 4 cut(s) 473, 782, 977, 995
BseNI ACTGG 6 cut(s) 223, 546, 831, 941, 1258, 1420
BseSI GKGCMC 1 cut(s) 1261
BseXI GCAGC 7 cut(s) 55, 664, 835, 1158, 1501, 1560, 1729
BseYI CCCAGC 3 cut(s) 1030, 1447, 1584
BsgI GTGCAG 1 cut(s) 663
Bsh1236I CGCG 1 cut(s) 1747
BshFI GGCC 6 cut(s) 595, 714, 792, 856, 1886, 1925
BshNI GGYRCC 1 cut(s) 1292
BshTI ACCGGT 1 cut(s) 1502
BsiHKAI GWGCWC 1 cut(s) 1261
BsiSI CCGG 6 cut(s) 711, 1503, 1767, 1776, 1803, 1933
BslFI GGGAC 3 cut(s) 812, 1426, 1697
BsmFI GGGAC 3 cut(s) 812, 1426, 1697
BsnI GGCC 6 cut(s) 595, 714, 792, 856, 1886, 1925
Bsp1286I GDGCHC 1 cut(s) 1261
Bsp13I TCCGGA 1 cut(s) 1766
Bsp143I GATC 5 cut(s) 666, 1308, 1468, 1630, 1876
Bsp1720I GCTNAGC 1 cut(s) 986
BspANI GGCC 6 cut(s) 595, 714, 792, 856, 1886, 1925
BspCNI CTCAG 4 cut(s) 472, 781, 978, 996
BspEI TCCGGA 1 cut(s) 1766
BspFNI CGCG 1 cut(s) 1747
BspLI GGNNCC 3 cut(s) 1294, 1446, 1470
BspMAI CTGCAG 1 cut(s) 1657
BspMI ACCTGC 4 cut(s) 105, 295, 666, 1660
BspPI GGATC 3 cut(s) 674, 1463, 1476
BspQI GCTCTTC 1 cut(s) 605
BspT107I GGYRCC 1 cut(s) 1292
BsrBI CCGCTC 1 cut(s) 598
BsrDI GCAATG 2 cut(s) 636, 1739
BsrFI RCCGGY 3 cut(s) 710, 1502, 1802
BsrI ACTGG 6 cut(s) 223, 546, 831, 941, 1258, 1420
BssAI RCCGGY 3 cut(s) 710, 1502, 1802
BssECI CCNNGG 5 cut(s) 160, 590, 1197, 1276, 1920
BssMI GATC 5 cut(s) 666, 1308, 1468, 1630, 1876
BssNAI GTATAC 1 cut(s) 409
BssT1I CCWWGG 3 cut(s) 1197, 1276, 1920
Bst1107I GTATAC 1 cut(s) 409
Bst2UI CCWGG 4 cut(s) 162, 591, 789, 1542
Bst6I CTCTTC 3 cut(s) 510, 605, 1673
BstAPI GCANNNNNTGC 3 cut(s) 10, 120, 1104
BstC8I GCNNGC 5 cut(s) 378, 712, 1745, 1784, 1804
BstDEI CTNAG 8 cut(s) 129, 459, 487, 768, 986, 1004, 1301, 1452
BstF5I GGATG 4 cut(s) 871, 921, 1372, 1771
BstFNI CGCG 1 cut(s) 1747
BstH2I RGCGCY 1 cut(s) 1744
BstHHI GCGC 2 cut(s) 1743, 1847
BstKTI GATC 5 cut(s) 669, 1311, 1471, 1633, 1879
BstMBI GATC 5 cut(s) 666, 1308, 1468, 1630, 1876
BstMWI GCNNNNNNNGC 9 cut(s) 10, 120, 595, 1104, 1726, 1735, 1738, 1744, 1853
BstNI CCWGG 4 cut(s) 162, 591, 789, 1542
BstNSI RCATGY 2 cut(s) 235, 380
BstSCI CCNGG 5 cut(s) 160, 589, 787, 1540, 1774
BstSFI CTRYAG 1 cut(s) 1653
BstSLI GKGCMC 1 cut(s) 1261
BstUI CGCG 1 cut(s) 1747
BstV1I GCAGC 7 cut(s) 55, 664, 835, 1158, 1501, 1560, 1729
BstV2I GAAGAC 2 cut(s) 1601, 1885
BstX2I RGATCY 1 cut(s) 1468
BstXI CCANNNNNNTGG 2 cut(s) 1388, 1548
BstYI RGATCY 1 cut(s) 1468
BstZ17I GTATAC 1 cut(s) 409
BsuI GTATCC 1 cut(s) 52
BsuRI GGCC 6 cut(s) 595, 714, 792, 856, 1886, 1925
BtsCI GGATG 4 cut(s) 871, 921, 1372, 1771
BtsI GCAGTG 3 cut(s) 897, 1125, 1266
BtsIMutI CAGTG 6 cut(s) 402, 732, 897, 1125, 1266, 1558
BveI ACCTGC 4 cut(s) 105, 295, 666, 1660
Cac8I GCNNGC 5 cut(s) 378, 712, 1745, 1784, 1804
CfoI GCGC 2 cut(s) 1743, 1847
Cfr10I RCCGGY 3 cut(s) 710, 1502, 1802
Cfr13I GGNCC 5 cut(s) 164, 284, 593, 1444, 1908
Csp6I GTAC 3 cut(s) 1027, 1040, 1863
CspAI ACCGGT 1 cut(s) 1502
CviQI GTAC 3 cut(s) 1027, 1040, 1863
DdeI CTNAG 8 cut(s) 129, 459, 487, 768, 986, 1004, 1301, 1452
DpnI GATC 5 cut(s) 668, 1310, 1470, 1632, 1878
DpnII GATC 5 cut(s) 666, 1308, 1468, 1630, 1876
EaeI YGGCCR 1 cut(s) 712
Eam1104I CTCTTC 3 cut(s) 510, 605, 1673
EarI CTCTTC 3 cut(s) 510, 605, 1673
Eco130I CCWWGG 3 cut(s) 1197, 1276, 1920
Eco47I GGWCC 4 cut(s) 164, 284, 1444, 1908
EcoO109I RGGNCCY 1 cut(s) 1444
EcoRII CCWGG 4 cut(s) 160, 589, 787, 1540
EcoT14I CCWWGG 3 cut(s) 1197, 1276, 1920
ErhI CCWWGG 3 cut(s) 1197, 1276, 1920
FalI AAGNNNNNCTT 2 cut(s) 1445, 1477
FaqI GGGAC 3 cut(s) 812, 1426, 1697
FauI CCCGC 2 cut(s) 1722, 1825
FblI GTMKAC 1 cut(s) 408
FokI GGATG 4 cut(s) 878, 908, 1359, 1758
FspBI CTAG 4 cut(s) 180, 200, 1289, 1754
GlaI GCGC 2 cut(s) 1742, 1846
GsaI CCCAGC 3 cut(s) 1034, 1451, 1588
GsuI CTGGAG 1 cut(s) 1437
HaeII RGCGCY 1 cut(s) 1744
HaeIII GGCC 6 cut(s) 595, 714, 792, 856, 1886, 1925
HapII CCGG 6 cut(s) 711, 1503, 1767, 1776, 1803, 1933
HhaI GCGC 2 cut(s) 1743, 1847
Hin6I GCGC 2 cut(s) 1741, 1845
HinP1I GCGC 2 cut(s) 1741, 1845
HincII GTYRAC 1 cut(s) 31
HindII GTYRAC 1 cut(s) 31
HinfI GANTC 4 cut(s) 1086, 1367, 1524, 1797
HpaII CCGG 6 cut(s) 711, 1503, 1767, 1776, 1803, 1933
HphI GGTGA 3 cut(s) 202, 1888, 1954
Hpy166II GTNNAC 4 cut(s) 31, 409, 1259, 1796
Hpy188I TCNGA 8 cut(s) 555, 565, 613, 1359, 1630, 1672, 1870, 1912
Hpy188III TCNNGA 4 cut(s) 313, 1153, 1475, 1767
Hpy8I GTNNAC 4 cut(s) 31, 409, 1259, 1796
HpyAV CCTTC 8 cut(s) 179, 917, 1394, 1435, 1670, 1677, 1719, 1897
HpyCH4IV ACGT 1 cut(s) 804
HpyF10VI GCNNNNNNNGC 9 cut(s) 10, 120, 595, 1104, 1726, 1735, 1738, 1744, 1853
HpyF3I CTNAG 8 cut(s) 129, 459, 487, 768, 986, 1004, 1301, 1452
HpySE526I ACGT 1 cut(s) 804
HspAI GCGC 2 cut(s) 1741, 1845
Kpn2I TCCGGA 1 cut(s) 1766
KroI GCCGGC 2 cut(s) 710, 1802
KroNI GCCGGC 2 cut(s) 712, 1804
Kzo9I GATC 5 cut(s) 666, 1308, 1468, 1630, 1876
LguI GCTCTTC 1 cut(s) 605
LmnI GCTCC 2 cut(s) 413, 1570
Lsp1109I GCAGC 7 cut(s) 55, 664, 835, 1158, 1501, 1560, 1729
LweI GCATC 6 cut(s) 556, 730, 856, 930, 1146, 1905
MaeI CTAG 4 cut(s) 180, 200, 1289, 1754
MaeII ACGT 1 cut(s) 804
MaeIII GTNAC 5 cut(s) 139, 208, 326, 1391, 1562
MalI GATC 5 cut(s) 668, 1310, 1470, 1632, 1878
MbiI CCGCTC 1 cut(s) 598
MboI GATC 5 cut(s) 666, 1308, 1468, 1630, 1876
MboII GAAGA 7 cut(s) 115, 527, 592, 1346, 1606, 1690, 1885
MfeI CAATTG 2 cut(s) 135, 1074
MflI RGATCY 1 cut(s) 1468
MhlI GDGCHC 1 cut(s) 1261
MluCI AATT 9 cut(s) 14, 86, 135, 171, 237, 928, 1074, 1246, 1396
MlyI GAGTC 1 cut(s) 1791
MmeI TCCRAC 4 cut(s) 1215, 1259, 1471, 1893
MroI TCCGGA 1 cut(s) 1766
MroNI GCCGGC 2 cut(s) 710, 1802
MseI TTAA 4 cut(s) 204, 579, 1317, 1458
MslI CAYNNNNRTG 4 cut(s) 98, 246, 1151, 1386
MspA1I CMGCKG 1 cut(s) 1584
MspI CCGG 6 cut(s) 711, 1503, 1767, 1776, 1803, 1933
MspR9I CCNGG 5 cut(s) 162, 591, 789, 1542, 1776
MunI CAATTG 2 cut(s) 135, 1074
MvaI CCWGG 4 cut(s) 162, 591, 789, 1542
MvnI CGCG 1 cut(s) 1747
MwoI GCNNNNNNNGC 9 cut(s) 10, 120, 595, 1104, 1726, 1735, 1738, 1744, 1853
NaeI GCCGGC 2 cut(s) 712, 1804
NciI CCSGG 1 cut(s) 1776
NdeII GATC 5 cut(s) 666, 1308, 1468, 1630, 1876
NgoMIV GCCGGC 2 cut(s) 710, 1802
NlaIV GGNNCC 3 cut(s) 1294, 1446, 1470
NmuCI GTSAC 2 cut(s) 208, 1562
NspI RCATGY 2 cut(s) 235, 380
OliI CACNNNNGTG 1 cut(s) 1151
PaeI GCATGC 1 cut(s) 380
PaqCI CACCTGC 1 cut(s) 1660
PciI ACATGT 1 cut(s) 231
PciSI GCTCTTC 1 cut(s) 605
PdiI GCCGGC 2 cut(s) 712, 1804
PfeI GAWTC 3 cut(s) 1086, 1367, 1524
PinAI ACCGGT 1 cut(s) 1502
PleI GAGTC 1 cut(s) 1791
PpsI GAGTC 1 cut(s) 1791
PpuMI RGGWCCY 1 cut(s) 1444
PscI ACATGT 1 cut(s) 231
PshBI ATTAAT 1 cut(s) 579
Psp1406I AACGTT 1 cut(s) 804
Psp5II RGGWCCY 1 cut(s) 1444
Psp6I CCWGG 4 cut(s) 160, 589, 787, 1540
PspFI CCCAGC 3 cut(s) 1030, 1447, 1584
PspGI CCWGG 4 cut(s) 160, 589, 787, 1540
PspN4I GGNNCC 3 cut(s) 1294, 1446, 1470
PspPI GGNCC 5 cut(s) 164, 284, 593, 1444, 1908
PspPPI RGGWCCY 1 cut(s) 1444
PstI CTGCAG 1 cut(s) 1657
PsuI RGATCY 1 cut(s) 1468
PvuII CAGCTG 1 cut(s) 1584
RsaI GTAC 3 cut(s) 1028, 1041, 1864
RsaNI GTAC 3 cut(s) 1027, 1040, 1863
RseI CAYNNNNRTG 4 cut(s) 98, 246, 1151, 1386
SapI GCTCTTC 1 cut(s) 605
SaqAI TTAA 4 cut(s) 204, 579, 1317, 1458
Sau3AI GATC 5 cut(s) 666, 1308, 1468, 1630, 1876
Sau96I GGNCC 5 cut(s) 164, 284, 593, 1444, 1908
SchI GAGTC 1 cut(s) 1791
ScrFI CCNGG 5 cut(s) 162, 591, 789, 1542, 1776
SduI GDGCHC 1 cut(s) 1261
SfaNI GCATC 6 cut(s) 556, 730, 856, 930, 1146, 1905
SfcI CTRYAG 1 cut(s) 1653
SgrAI CRCCGGYG 1 cut(s) 1502
SinI GGWCC 4 cut(s) 164, 284, 1444, 1908
SmiMI CAYNNNNRTG 4 cut(s) 98, 246, 1151, 1386
SphI GCATGC 1 cut(s) 380
Sse9I AATT 9 cut(s) 14, 86, 135, 171, 237, 928, 1074, 1246, 1396
SspI AATATT 1 cut(s) 481
SspMI CTAG 4 cut(s) 180, 200, 1289, 1754
StyD4I CCNGG 5 cut(s) 160, 589, 787, 1540, 1774
StyI CCWWGG 3 cut(s) 1197, 1276, 1920
TaiI ACGT 1 cut(s) 807
TaqI TCGA 3 cut(s) 1053, 1431, 1875
TasI AATT 9 cut(s) 14, 86, 135, 171, 237, 928, 1074, 1246, 1396
TauI GCSGC 6 cut(s) 598, 1732, 1741, 1782, 1859, 1950
TfiI GAWTC 3 cut(s) 1086, 1367, 1524
Tru1I TTAA 4 cut(s) 204, 579, 1317, 1458
Tru9I TTAA 4 cut(s) 204, 579, 1317, 1458
TscAI CASTG 6 cut(s) 409, 732, 904, 1132, 1273, 1565
TseFI GTSAC 2 cut(s) 208, 1562
TseI GCWGC 7 cut(s) 68, 677, 848, 1171, 1514, 1573, 1717
Tsp45I GTSAC 2 cut(s) 208, 1562
TspDTI ATGAA 6 cut(s) 230, 832, 850, 1376, 1393, 1543
TspGWI ACGGA 4 cut(s) 71, 426, 679, 1918
TspRI CASTG 6 cut(s) 409, 732, 904, 1132, 1273, 1565
VneI GTGCAC 1 cut(s) 1257
VpaK11BI GGWCC 4 cut(s) 164, 284, 1444, 1908
VspI ATTAAT 1 cut(s) 579
XceI RCATGY 2 cut(s) 235, 380
XmiI GTMKAC 1 cut(s) 408
XspI CTAG 4 cut(s) 180, 200, 1289, 1754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.