pycom04g15930

2,3-bisphosphoglycerate-independent phosphoglycerate

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
18658279 .. 18660571
2293 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g15930.4

Sequence Viewer

Length: 1281 bp
ATGAGTGACGGTGGAGTTCATTCTCGGCTTGATCAATTGCTATTGTTGCTTAAAGGAGCTAGTGAACATGGTGCTAAAAAGATCCGTGTTCATGTTCTCACTGATGGACGTGATGTTCTGGACGGTTCAAGTGTGGGATTTGCAGAAATCCTTGAAAATGACCTTGCGAAATTGCGTGAGAAAGGTGTGGATGCACAGGTTGCGTCTGGTGGTGGTCGTATGTATGTCACCATGGATCGTTATGAGAATGATTGGAGCGTCGTAAAACGAGGATGGGATGCCCAAGTTCTTGGTGAAGCTCCCTATAAATTTAAGAATGCAGTTGAAGCTATCAAGACGTTGAGGGCGGAACCAAACGCCAATGACCAGTATCTACCTCCTTTTGTTATTGTTGACGACAGTGGAAAGCCTGTTGGCCCGATCGTGGATGGTGATGCTGTTGTTACATTCAACTTCCGTGCTGACCGTATGGTTATGATTGCCAAGGCGCTTGAGTATGCCGATTTTGACAAGTTTGATCGAGTTCGAGTCCCAAAAATCCGTTATGCCGGTATGCTTCAGTATGATGGTGAGCTGAAGCTTCCAAGCCGTTACCTTGTAGAACCCCCAGAGATTGATAGAACATCTGGTGAATATCTTACGTACAACGGTGTCCGCACTTTTGCCTGCAGTGAGACTGTTAAGTTTGGCCATGTCACTTTCTTCTGGAACGGCAATCGTTCTGGTTATTTTAACGATAAAATGGAGGAGTATGTAGAAATTCCAAGCGATAGTGGAATCACATTCAACGTCCAGCCAAAAATGAAGGCAGTCGAGATTGCTGAAAAGGCTAGGGATGCTATTCTTAGTGGAAAGTTTGAGCAGGTTCGTGTTAACCTTCCAAATGGCGACATGGTGGGGCACACAGGCGACATTGAGGCCACAATTGTTGCTTGCAAGGCTGCTGATGAAGCCGTCAAGATAATTCTTGATGCAATCGAGAGGGTTGGTGGAATTTACGTCGTCACTGCTGATCATGGTAACGCTGAGGATATGGTGAAGAGAAATAAGACCGGGCAACCTCTTCTCGACAAGAGTGGCAACATTCAAATTCTTACTTCCCATACTCTACAGCCAGTCCCAATTGCAATCGGAGGTCCTGGACTTGCACCTGGAGTCCGTTTCCGCAAGGATCTTCCTAGCGGCGGGCTGGCCAATGTTGCTGCAACTGTGATGAACCTGCATGGATTCCAGGCTCCTAGCGACTACGAGCCATCCCTCATCGAAGTTGCTGATAACTAG

Protein Analysis

427

Amino Acids

46.6

Weight (kDa)

5.35

Isoelectric Point (pI)

34.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 853, 1227
AciI CCGC 5 cut(s) 347, 655, 1165, 1182, 1185
AclWI GGATC 3 cut(s) 76, 243, 1179
AcoI YGGCCR 2 cut(s) 688, 1191
AcsI RAATTY 4 cut(s) 308, 759, 993, 1089
AcuI CTGAAG 2 cut(s) 542, 596
AfaI GTAC 1 cut(s) 644
AfiI CCNNNNNNNGG 2 cut(s) 424, 1184
AgsI TTSAA 6 cut(s) 129, 155, 326, 451, 787, 1088
AjiI CACGTC 1 cut(s) 110
AjnI CCWGG 3 cut(s) 1138, 1150, 1230
AloI GAACNNNNNNTCC 2 cut(s) 99, 131
AluBI AGCT 5 cut(s) 59, 299, 329, 574, 580
AluI AGCT 5 cut(s) 59, 299, 329, 574, 580
Alw26I GTCTC 1 cut(s) 668
AlwI GGATC 3 cut(s) 76, 243, 1179
AoxI GGCC 4 cut(s) 415, 688, 918, 1191
ApeKI GCWGC 2 cut(s) 941, 1202
ApoI RAATTY 4 cut(s) 308, 759, 993, 1089
AspLEI GCGC 1 cut(s) 490
AspS9I GGNCC 2 cut(s) 416, 1136
AsuC2I CCSGG 1 cut(s) 1054
AsuHPI GGTGA 6 cut(s) 220, 305, 443, 581, 641, 1048
AvaII GGWCC 1 cut(s) 1136
BaeGI GKGCMC 1 cut(s) 903
BalI TGGCCA 2 cut(s) 690, 1193
BbvCI CCTCAGC 1 cut(s) 1026
BbvI GCAGC 2 cut(s) 928, 1189
BccI CCATC 5 cut(s) 98, 267, 422, 560, 1261
BceAI ACGGC 3 cut(s) 573, 727, 938
BciT130I CCWGG 3 cut(s) 1140, 1152, 1232
BclI TGATCA 2 cut(s) 31, 1012
BcnI CCSGG 1 cut(s) 1054
BcoDI GTCTC 1 cut(s) 668
BfaI CTAG 5 cut(s) 60, 831, 1179, 1239, 1279
BfmI CTRYAG 2 cut(s) 667, 1109
BfoI RGCGCY 1 cut(s) 491
BfuAI ACCTGC 2 cut(s) 853, 1227
BisI GCNGC 3 cut(s) 942, 1183, 1203
BlsI GCNGC 3 cut(s) 943, 1184, 1204
Bme1390I CCNGG 4 cut(s) 1054, 1140, 1152, 1232
Bme18I GGWCC 1 cut(s) 1136
BmgBI CACGTC 1 cut(s) 110
BmgT120I GGNCC 2 cut(s) 416, 1136
BmiI GGNNCC 2 cut(s) 351, 1236
BmrFI CCNGG 4 cut(s) 1054, 1140, 1152, 1232
BmsI GCATC 5 cut(s) 181, 268, 424, 826, 961
BpmI CTGGAG 1 cut(s) 1173
Bpu10I CCTNAGC 1 cut(s) 1026
BpuEI CTTGAG 1 cut(s) 512
BpuMI CCSGG 1 cut(s) 1054
BsaAI YACGTR 1 cut(s) 642
BsaJI CCNNGG 2 cut(s) 231, 483
Bsc4I CCNNNNNNNGG 2 cut(s) 424, 1184
Bse118I RCCGGY 1 cut(s) 548
Bse1I ACTGG 2 cut(s) 367, 1115
BseBI CCWGG 3 cut(s) 1140, 1152, 1232
BseDI CCNNGG 2 cut(s) 231, 483
BseGI GGATG 6 cut(s) 196, 278, 283, 433, 841, 1253
BseLI CCNNNNNNNGG 2 cut(s) 424, 1184
BseMII CTCAG 1 cut(s) 1017
BseNI ACTGG 2 cut(s) 367, 1115
BseRI GAGGAG 1 cut(s) 761
BseSI GKGCMC 1 cut(s) 903
BseXI GCAGC 2 cut(s) 928, 1189
Bsh1285I CGRYCG 1 cut(s) 423
BshFI GGCC 4 cut(s) 417, 690, 920, 1193
BsiEI CGRYCG 1 cut(s) 423
BsiSI CCGG 2 cut(s) 549, 1053
BslFI GGGAC 2 cut(s) 515, 1103
BslI CCNNNNNNNGG 2 cut(s) 424, 1184
BsmAI GTCTC 1 cut(s) 668
BsmFI GGGAC 2 cut(s) 515, 1103
BsmI GAATGC 1 cut(s) 322
BsnI GGCC 4 cut(s) 417, 690, 920, 1193
Bsp1286I GDGCHC 1 cut(s) 903
Bsp143I GATC 7 cut(s) 31, 81, 235, 420, 517, 1012, 1171
Bsp19I CCATGG 1 cut(s) 231
BspACI CCGC 5 cut(s) 347, 655, 1165, 1182, 1185
BspANI GGCC 4 cut(s) 417, 690, 920, 1193
BspCNI CTCAG 1 cut(s) 1018
BspLI GGNNCC 2 cut(s) 351, 1236
BspMAI CTGCAG 1 cut(s) 671
BspMI ACCTGC 2 cut(s) 853, 1227
BspPI GGATC 3 cut(s) 76, 243, 1179
BsrFI RCCGGY 1 cut(s) 548
BsrI ACTGG 2 cut(s) 367, 1115
BssAI RCCGGY 1 cut(s) 548
BssECI CCNNGG 2 cut(s) 231, 483
BssMI GATC 7 cut(s) 31, 81, 235, 420, 517, 1012, 1171
BssT1I CCWWGG 2 cut(s) 231, 483
Bst2UI CCWGG 3 cut(s) 1140, 1152, 1232
Bst4CI ACNGT 7 cut(s) 11, 125, 401, 467, 650, 679, 1210
Bst6I CTCTTC 2 cut(s) 1034, 1068
BstAPI GCANNNNNTGC 1 cut(s) 200
BstBAI YACGTR 1 cut(s) 642
BstC8I GCNNGC 4 cut(s) 667, 934, 1187, 1191
BstDEI CTNAG 2 cut(s) 845, 1026
BstDSI CCRYGG 1 cut(s) 231
BstF5I GGATG 6 cut(s) 196, 278, 283, 433, 841, 1253
BstH2I RGCGCY 1 cut(s) 491
BstHHI GCGC 1 cut(s) 490
BstKTI GATC 7 cut(s) 34, 84, 238, 423, 520, 1015, 1174
BstMAI GTCTC 1 cut(s) 668
BstMBI GATC 7 cut(s) 31, 81, 235, 420, 517, 1012, 1171
BstMCI CGRYCG 1 cut(s) 423
BstMWI GCNNNNNNNGC 8 cut(s) 46, 200, 326, 827, 836, 938, 950, 1199
BstNI CCWGG 3 cut(s) 1140, 1152, 1232
BstSCI CCNGG 4 cut(s) 1052, 1138, 1150, 1230
BstSFI CTRYAG 2 cut(s) 667, 1109
BstSLI GKGCMC 1 cut(s) 903
BstSNI TACGTA 1 cut(s) 642
BstV1I GCAGC 2 cut(s) 928, 1189
BstX2I RGATCY 2 cut(s) 81, 1171
BstXI CCANNNNNNTGG 1 cut(s) 290
BstYI RGATCY 2 cut(s) 81, 1171
BsuRI GGCC 4 cut(s) 417, 690, 920, 1193
BtgI CCRYGG 1 cut(s) 231
BtrI CACGTC 1 cut(s) 110
BtsCI GGATG 6 cut(s) 196, 278, 283, 433, 841, 1253
BtsI GCAGTG 2 cut(s) 676, 1005
BtsIMutI CAGTG 4 cut(s) 99, 406, 676, 1005
BveI ACCTGC 2 cut(s) 853, 1227
Cac8I GCNNGC 4 cut(s) 667, 934, 1187, 1191
CfoI GCGC 1 cut(s) 490
Cfr10I RCCGGY 1 cut(s) 548
Cfr13I GGNCC 2 cut(s) 416, 1136
CseI GACGC 2 cut(s) 192, 247
Csp6I GTAC 1 cut(s) 643
CspCI CAANNNNNGTGG 2 cut(s) 910, 945
CviAII CATG 7 cut(s) 68, 92, 232, 692, 892, 1016, 1223
CviQI GTAC 1 cut(s) 643
DdeI CTNAG 2 cut(s) 845, 1026
DpnI GATC 7 cut(s) 33, 83, 237, 422, 519, 1014, 1173
DpnII GATC 7 cut(s) 31, 81, 235, 420, 517, 1012, 1171
EaeI YGGCCR 2 cut(s) 688, 1191
Eam1104I CTCTTC 2 cut(s) 1034, 1068
EarI CTCTTC 2 cut(s) 1034, 1068
EciI GGCGGA 1 cut(s) 362
Eco105I TACGTA 1 cut(s) 642
Eco130I CCWWGG 2 cut(s) 231, 483
Eco47I GGWCC 1 cut(s) 1136
Eco57I CTGAAG 2 cut(s) 542, 596
EcoO109I RGGNCCY 1 cut(s) 1136
EcoRII CCWGG 3 cut(s) 1138, 1150, 1230
EcoT14I CCWWGG 2 cut(s) 231, 483
ErhI CCWWGG 2 cut(s) 231, 483
FaeI CATG 7 cut(s) 71, 95, 235, 695, 895, 1019, 1226
FaqI GGGAC 2 cut(s) 515, 1103
FatI CATG 7 cut(s) 67, 91, 231, 691, 891, 1015, 1222
FauI CCCGC 1 cut(s) 1178
FbaI TGATCA 2 cut(s) 31, 1012
Fnu4HI GCNGC 3 cut(s) 942, 1183, 1203
FokI GGATG 6 cut(s) 203, 285, 290, 440, 848, 1240
Fsp4HI GCNGC 3 cut(s) 942, 1183, 1203
FspBI CTAG 5 cut(s) 60, 831, 1179, 1239, 1279
GlaI GCGC 1 cut(s) 489
GluI GCNGC 3 cut(s) 942, 1183, 1203
GsuI CTGGAG 1 cut(s) 1173
HaeII RGCGCY 1 cut(s) 491
HaeIII GGCC 4 cut(s) 417, 690, 920, 1193
HapII CCGG 2 cut(s) 549, 1053
HgaI GACGC 2 cut(s) 192, 247
HhaI GCGC 1 cut(s) 490
Hin1II CATG 7 cut(s) 71, 95, 235, 695, 895, 1019, 1226
Hin6I GCGC 1 cut(s) 488
HinP1I GCGC 1 cut(s) 488
HincII GTYRAC 2 cut(s) 394, 874
HindII GTYRAC 2 cut(s) 394, 874
HindIII AAGCTT 1 cut(s) 578
HinfI GANTC 4 cut(s) 528, 777, 1155, 1227
HpaI GTTAAC 1 cut(s) 874
HpaII CCGG 2 cut(s) 549, 1053
HphI GGTGA 6 cut(s) 220, 305, 443, 581, 641, 1048
Hpy166II GTNNAC 3 cut(s) 65, 394, 874
Hpy188I TCNGA 1 cut(s) 1133
Hpy188III TCNNGA 8 cut(s) 119, 334, 706, 814, 958, 968, 979, 1067
Hpy8I GTNNAC 3 cut(s) 65, 394, 874
Hpy99I CGWCG 2 cut(s) 263, 1004
HpyAV CCTTC 2 cut(s) 799, 887
HpyCH4III ACNGT 7 cut(s) 11, 125, 401, 467, 650, 679, 1210
HpyCH4IV ACGT 5 cut(s) 109, 338, 641, 789, 999
HpyF10VI GCNNNNNNNGC 8 cut(s) 46, 200, 326, 827, 836, 938, 950, 1199
HpyF3I CTNAG 2 cut(s) 845, 1026
HpySE526I ACGT 5 cut(s) 109, 338, 641, 789, 999
Hsp92II CATG 7 cut(s) 71, 95, 235, 695, 895, 1019, 1226
HspAI GCGC 1 cut(s) 488
Ksp22I TGATCA 2 cut(s) 31, 1012
KspAI GTTAAC 1 cut(s) 874
Kzo9I GATC 7 cut(s) 31, 81, 235, 420, 517, 1012, 1171
LmnI GCTCC 4 cut(s) 56, 255, 304, 1240
Lsp1109I GCAGC 2 cut(s) 928, 1189
LweI GCATC 5 cut(s) 181, 268, 424, 826, 961
MaeI CTAG 5 cut(s) 60, 831, 1179, 1239, 1279
MaeII ACGT 5 cut(s) 109, 338, 641, 789, 999
MaeIII GTNAC 7 cut(s) 5, 226, 442, 590, 694, 1003, 1019
MalI GATC 7 cut(s) 33, 83, 237, 422, 519, 1014, 1173
MboI GATC 7 cut(s) 31, 81, 235, 420, 517, 1012, 1171
MboII GAAGA 4 cut(s) 694, 1051, 1055, 1166
MfeI CAATTG 3 cut(s) 35, 924, 1122
MflI RGATCY 2 cut(s) 81, 1171
MhlI GDGCHC 1 cut(s) 903
MlsI TGGCCA 2 cut(s) 690, 1193
MluCI AATT 9 cut(s) 35, 170, 308, 759, 924, 963, 993, 1089, 1122
MluNI TGGCCA 2 cut(s) 690, 1193
MlyI GAGTC 2 cut(s) 537, 1164
Mox20I TGGCCA 2 cut(s) 690, 1193
MscI TGGCCA 2 cut(s) 690, 1193
MseI TTAA 5 cut(s) 51, 312, 681, 732, 873
Msp20I TGGCCA 2 cut(s) 690, 1193
MspI CCGG 2 cut(s) 549, 1053
MspR9I CCNGG 4 cut(s) 1054, 1140, 1152, 1232
MunI CAATTG 3 cut(s) 35, 924, 1122
Mva1269I GAATGC 1 cut(s) 322
MvaI CCWGG 3 cut(s) 1140, 1152, 1232
MwoI GCNNNNNNNGC 8 cut(s) 46, 200, 326, 827, 836, 938, 950, 1199
NciI CCSGG 1 cut(s) 1054
NcoI CCATGG 1 cut(s) 231
NdeII GATC 7 cut(s) 31, 81, 235, 420, 517, 1012, 1171
NlaIII CATG 7 cut(s) 71, 95, 235, 695, 895, 1019, 1226
NlaIV GGNNCC 2 cut(s) 351, 1236
NmeAIII GCCGAG 1 cut(s) 4
NmuCI GTSAC 4 cut(s) 5, 226, 694, 1003
PctI GAATGC 1 cut(s) 322
PfeI GAWTC 2 cut(s) 777, 1227
PfoI TCCNGGA 1 cut(s) 1138
PkrI GCNGC 3 cut(s) 943, 1184, 1204
Ple19I CGATCG 1 cut(s) 423
PleI GAGTC 2 cut(s) 536, 1163
PpsI GAGTC 2 cut(s) 536, 1163
Ppu21I YACGTR 1 cut(s) 642
PpuMI RGGWCCY 1 cut(s) 1136
Psp5II RGGWCCY 1 cut(s) 1136
Psp6I CCWGG 3 cut(s) 1138, 1150, 1230
PspGI CCWGG 3 cut(s) 1138, 1150, 1230
PspN4I GGNNCC 2 cut(s) 351, 1236
PspPI GGNCC 2 cut(s) 416, 1136
PspPPI RGGWCCY 1 cut(s) 1136
PstI CTGCAG 1 cut(s) 671
PsuI RGATCY 2 cut(s) 81, 1171
PvuI CGATCG 1 cut(s) 423
RsaI GTAC 1 cut(s) 644
RsaNI GTAC 1 cut(s) 643
SaqAI TTAA 5 cut(s) 51, 312, 681, 732, 873
SatI GCNGC 3 cut(s) 942, 1183, 1203
Sau3AI GATC 7 cut(s) 31, 81, 235, 420, 517, 1012, 1171
Sau96I GGNCC 2 cut(s) 416, 1136
SchI GAGTC 2 cut(s) 537, 1164
ScrFI CCNGG 4 cut(s) 1054, 1140, 1152, 1232
SduI GDGCHC 1 cut(s) 903
SfaNI GCATC 5 cut(s) 181, 268, 424, 826, 961
SfcI CTRYAG 2 cut(s) 667, 1109
SinI GGWCC 1 cut(s) 1136
SmlI CTYRAG 1 cut(s) 491
SmoI CTYRAG 1 cut(s) 491
SnaBI TACGTA 1 cut(s) 642
Sse9I AATT 9 cut(s) 35, 170, 308, 759, 924, 963, 993, 1089, 1122
SsiI CCGC 5 cut(s) 347, 655, 1165, 1182, 1185
SspMI CTAG 5 cut(s) 60, 831, 1179, 1239, 1279
StyD4I CCNGG 4 cut(s) 1052, 1138, 1150, 1230
StyI CCWWGG 2 cut(s) 231, 483
TaaI ACNGT 7 cut(s) 11, 125, 401, 467, 650, 679, 1210
TaiI ACGT 5 cut(s) 112, 341, 644, 792, 1002
TaqI TCGA 6 cut(s) 520, 526, 813, 978, 1068, 1263
TasI AATT 9 cut(s) 35, 170, 308, 759, 924, 963, 993, 1089, 1122
TauI GCSGC 1 cut(s) 1185
TfiI GAWTC 2 cut(s) 777, 1227
Tru1I TTAA 5 cut(s) 51, 312, 681, 732, 873
Tru9I TTAA 5 cut(s) 51, 312, 681, 732, 873
TscAI CASTG 4 cut(s) 106, 406, 676, 1012
TseFI GTSAC 4 cut(s) 5, 226, 694, 1003
TseI GCWGC 2 cut(s) 941, 1202
Tsp45I GTSAC 4 cut(s) 5, 226, 694, 1003
TspDTI ATGAA 5 cut(s) 8, 80, 818, 963, 1229
TspGWI ACGGA 4 cut(s) 74, 446, 530, 1148
TspRI CASTG 4 cut(s) 106, 406, 676, 1012
VpaK11BI GGWCC 1 cut(s) 1136
XapI RAATTY 4 cut(s) 308, 759, 993, 1089
XspI CTAG 5 cut(s) 60, 831, 1179, 1239, 1279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.