pycom12g18160

2,3-bisphosphoglycerate-independent phosphoglycerate

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
20379357 .. 20382798
3442 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g18160.1

Sequence Viewer

Length: 1449 bp
ATGGGCAACAGTGAAGTGGGTCACAATGCTCTCGGCGCCGGGCGTATTTTTGCCCAGGGTGCTAAGCTTGTCGACGCTGCACTTGCTTCCGGGAAAATGTTTGAGGGCGAAGGTTTTAAGTACATTAAGGAATCCTTTGCGACTAACACATTGCATCTCATTGGTTTAATGAGTGATGGTGGAGTCCATTCTCGGCTCGATCAACTGCTATTGTTGCTTAAAGGAGCTAGTGAGCAAGGTGCTAAAAGGATCCGTGTGCATGTTCTCACTGATGGACGTGATGTTCTTGATGGTTCAAGTGTGGGATTTGCAGAAATCCTTGAAAATGAACTTGTGAAATTGCGTGAGAAAGGTGTGGATGCACAGGTTGCATCTGGTGGTGGTCGTATGTATGTCACCATGGATCGTTATGAGAATGACTGGAGTGTTGTAAAGCGAGGATGGGATGCCCAAGTTCTTGGTGAAGCTCCCTATAAATTTAAGAATGTAGTTGAAGCTATCAAGACATTGAGAGCGGAACCAAAAGCCAATGACCAGTACCTACCTCCTTTTGTTATTGTCGACGACAGTGGAAAGCCTGTTGGCCCAATTGTGGATGGTGATGCTGTTGTTACATTCAACTTCCGAGCTGACCGTATGGTTATGCTTGCCAAGGCGCTTGAGTATGCAGATTTTGACAAGTTTGATCGGGTTAGAGTCCCTAAAATTCGTTATGCTGGTATGCTTCAGTATGATGGTGAGCTGAAGCTTCCAAGCAAATACCTTGTAGAACCCCCAGAGATTGATAGAACATCTGGTGAATATCTTACATACAACGGTGTCCGTACTTTTGCCTGCAGTGAGACTGTTAAATTTGGCCATGTCACTTTCTTCTGGAATGGGAATCGCTCTGGGTATTTTAACGATAAAATGGAGGAGTATGTGGAAATTCCAAGTGATAGTGGAATCACATTCAACGTCCAGCCAAAAATGAAGGCAATTGAGATTGCTGAAAGGGCGAGGGATGCTATTCTTAGTGGAAAGTTTGAGCAGGTACGTGTTAACCTACCAAACTCAGATATGGTCGGGCACACTGGCGACATTGCGGCCACAGTTGTAGCTTGCAAGGCTGCTGATGAAGCTGTCAAGATAATTTTTGATGCAATCGAGAAAGCTGGTGGAATTTACGTCGTCACTGCAGATCATGGTAACGCTGAGGATATGGTGAAGAGAAACAAGACTGGGCAACCTCTTCTTGACAAGAATGGCAACATTCAAATTCTTACTTCCCATACTCTACAGCCAGTTCCGATTGCAATTGGAGGTCCTGGACTTGCACCCGGAGTTCGCTTCCGCAAGGATCTTCCTAGCGGTGGGCTGGCCAATGTTGCTGCAACCGTGATGAACCTGCACGGGTTCCAGGCTCCTAGCGACTACGAGCCATCCCTCATCGAAGTTGTTGATAACTAG

Protein Analysis

483

Amino Acids

52.53

Weight (kDa)

5.62

Isoelectric Point (pI)

32.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metalloenzyme PF01676 1 - 467 4.1e-68 Metalloenzyme superfamily
iPGM_N PF06415 24 - 245 1.5e-57 BPG-independent PGAM N-terminus (iPGM_N)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1021, 1395
AccB1I GGYRCC 1 cut(s) 35
AccBSI CCGCTC 1 cut(s) 515
AccI GTMKAC 2 cut(s) 72, 561
AciI CCGC 4 cut(s) 515, 1085, 1333, 1350
AclWI GGATC 4 cut(s) 244, 257, 411, 1347
AcoI YGGCCR 3 cut(s) 856, 1086, 1359
AcsI RAATTY 6 cut(s) 476, 705, 851, 927, 1161, 1257
AcuI CTGAAG 2 cut(s) 710, 764
AcyI GRCGYC 1 cut(s) 36
AfaI GTAC 4 cut(s) 122, 539, 826, 1035
AfiI CCNNNNNNNGG 2 cut(s) 592, 1352
AflIII ACRYGT 1 cut(s) 1036
AgsI TTSAA 6 cut(s) 297, 323, 494, 619, 955, 1256
AjiI CACGTC 1 cut(s) 278
AjnI CCWGG 3 cut(s) 54, 1306, 1398
AloI GAACNNNNNNTCC 2 cut(s) 267, 299
Alw26I GTCTC 1 cut(s) 836
AlwI GGATC 4 cut(s) 244, 257, 411, 1347
AoxI GGCC 4 cut(s) 583, 856, 1086, 1359
ApeKI GCWGC 3 cut(s) 77, 1109, 1370
ApoI RAATTY 6 cut(s) 476, 705, 851, 927, 1161, 1257
AspLEI GCGC 2 cut(s) 38, 658
AspS9I GGNCC 2 cut(s) 584, 1304
AsuC2I CCSGG 3 cut(s) 40, 91, 1320
AsuHPI GGTGA 6 cut(s) 388, 473, 611, 749, 809, 1216
AvaII GGWCC 1 cut(s) 1304
BaeGI GKGCMC 1 cut(s) 1071
BalI TGGCCA 2 cut(s) 858, 1361
BamHI GGATCC 1 cut(s) 249
BanI GGYRCC 1 cut(s) 35
BbvCI CCTCAGC 1 cut(s) 1194
BbvI GCAGC 3 cut(s) 64, 1096, 1357
BccI CCATC 7 cut(s) 170, 266, 284, 435, 590, 728, 1429
BciT130I CCWGG 3 cut(s) 56, 1308, 1400
BcnI CCSGG 3 cut(s) 40, 91, 1320
BcoDI GTCTC 1 cut(s) 836
BfaI CTAG 4 cut(s) 228, 1347, 1407, 1447
BfmI CTRYAG 3 cut(s) 835, 1176, 1277
BfoI RGCGCY 2 cut(s) 39, 659
BfuAI ACCTGC 2 cut(s) 1021, 1395
BisI GCNGC 4 cut(s) 78, 1086, 1110, 1371
BlpI GCTNAGC 1 cut(s) 63
BlsI GCNGC 4 cut(s) 79, 1087, 1111, 1372
Bme1390I CCNGG 6 cut(s) 40, 56, 91, 1308, 1320, 1400
Bme18I GGWCC 1 cut(s) 1304
BmgBI CACGTC 1 cut(s) 278
BmgT120I GGNCC 2 cut(s) 584, 1304
BmiI GGNNCC 5 cut(s) 37, 251, 519, 1397, 1404
BmrFI CCNGG 6 cut(s) 40, 56, 91, 1308, 1320, 1400
BmrI ACTGGG 1 cut(s) 1230
BmsI GCATC 7 cut(s) 163, 349, 380, 436, 592, 994, 1129
BmuI ACTGGG 1 cut(s) 1230
BpmI CTGGAG 1 cut(s) 442
Bpu10I CCTNAGC 1 cut(s) 1194
Bpu1102I GCTNAGC 1 cut(s) 63
BpuEI CTTGAG 1 cut(s) 680
BpuMI CCSGG 3 cut(s) 40, 91, 1320
BsaAI YACGTR 1 cut(s) 1037
BsaHI GRCGYC 1 cut(s) 36
BsaJI CCNNGG 4 cut(s) 54, 55, 399, 651
Bsc4I CCNNNNNNNGG 2 cut(s) 592, 1352
Bse1I ACTGG 5 cut(s) 425, 535, 1078, 1225, 1283
Bse3DI GCAATG 2 cut(s) 149, 1080
BseBI CCWGG 3 cut(s) 56, 1308, 1400
BseDI CCNNGG 4 cut(s) 54, 55, 399, 651
BseGI GGATG 6 cut(s) 364, 446, 451, 601, 1009, 1421
BseLI CCNNNNNNNGG 2 cut(s) 592, 1352
BseMI GCAATG 2 cut(s) 149, 1080
BseMII CTCAG 2 cut(s) 1068, 1185
BseNI ACTGG 5 cut(s) 425, 535, 1078, 1225, 1283
BseRI GAGGAG 1 cut(s) 929
BseSI GKGCMC 1 cut(s) 1071
BseXI GCAGC 3 cut(s) 64, 1096, 1357
BsgI GTGCAG 2 cut(s) 63, 1373
BshFI GGCC 4 cut(s) 585, 858, 1088, 1361
BshNI GGYRCC 1 cut(s) 35
BsiSI CCGG 3 cut(s) 39, 90, 1320
BslFI GGGAC 1 cut(s) 683
BslI CCNNNNNNNGG 2 cut(s) 592, 1352
BsmAI GTCTC 1 cut(s) 836
BsmFI GGGAC 1 cut(s) 683
BsnI GGCC 4 cut(s) 585, 858, 1088, 1361
Bsp1286I GDGCHC 1 cut(s) 1071
Bsp143I GATC 6 cut(s) 199, 249, 403, 685, 1180, 1339
Bsp1720I GCTNAGC 1 cut(s) 63
Bsp19I CCATGG 1 cut(s) 399
BspACI CCGC 4 cut(s) 515, 1085, 1333, 1350
BspANI GGCC 4 cut(s) 585, 858, 1088, 1361
BspCNI CTCAG 2 cut(s) 1067, 1186
BspLI GGNNCC 5 cut(s) 37, 251, 519, 1397, 1404
BspMAI CTGCAG 2 cut(s) 839, 1180
BspMI ACCTGC 2 cut(s) 1021, 1395
BspPI GGATC 4 cut(s) 244, 257, 411, 1347
BspT107I GGYRCC 1 cut(s) 35
BsrBI CCGCTC 1 cut(s) 515
BsrDI GCAATG 2 cut(s) 149, 1080
BsrI ACTGG 5 cut(s) 425, 535, 1078, 1225, 1283
BssECI CCNNGG 4 cut(s) 54, 55, 399, 651
BssMI GATC 6 cut(s) 199, 249, 403, 685, 1180, 1339
BssNI GRCGYC 1 cut(s) 36
BssT1I CCWWGG 2 cut(s) 399, 651
Bst2UI CCWGG 3 cut(s) 56, 1308, 1400
Bst4CI ACNGT 7 cut(s) 11, 569, 635, 818, 847, 1093, 1378
Bst6I CTCTTC 2 cut(s) 1202, 1236
BstACI GRCGYC 1 cut(s) 36
BstAPI GCANNNNNTGC 1 cut(s) 368
BstBAI YACGTR 1 cut(s) 1037
BstC8I GCNNGC 4 cut(s) 648, 835, 1102, 1359
BstDEI CTNAG 4 cut(s) 63, 1013, 1054, 1194
BstDSI CCRYGG 1 cut(s) 399
BstF5I GGATG 6 cut(s) 364, 446, 451, 601, 1009, 1421
BstH2I RGCGCY 2 cut(s) 39, 659
BstHHI GCGC 2 cut(s) 38, 658
BstKTI GATC 6 cut(s) 202, 252, 406, 688, 1183, 1342
BstMAI GTCTC 1 cut(s) 836
BstMBI GATC 6 cut(s) 199, 249, 403, 685, 1180, 1339
BstNI CCWGG 3 cut(s) 56, 1308, 1400
BstNSI RCATGY 1 cut(s) 263
BstSCI CCNGG 6 cut(s) 38, 54, 89, 1306, 1318, 1398
BstSFI CTRYAG 3 cut(s) 835, 1176, 1277
BstSLI GKGCMC 1 cut(s) 1071
BstV1I GCAGC 3 cut(s) 64, 1096, 1357
BstX2I RGATCY 2 cut(s) 249, 1339
BstXI CCANNNNNNTGG 1 cut(s) 458
BstYI RGATCY 2 cut(s) 249, 1339
BsuRI GGCC 4 cut(s) 585, 858, 1088, 1361
BtgI CCRYGG 1 cut(s) 399
BtrI CACGTC 1 cut(s) 278
BtsCI GGATG 6 cut(s) 364, 446, 451, 601, 1009, 1421
BtsI GCAGTG 2 cut(s) 844, 1173
BtsIMutI CAGTG 6 cut(s) 16, 267, 574, 844, 1071, 1173
BveI ACCTGC 2 cut(s) 1021, 1395
Cac8I GCNNGC 4 cut(s) 648, 835, 1102, 1359
CfoI GCGC 2 cut(s) 38, 658
Cfr13I GGNCC 2 cut(s) 584, 1304
CseI GACGC 1 cut(s) 83
Csp6I GTAC 4 cut(s) 121, 538, 825, 1034
CviAII CATG 4 cut(s) 260, 400, 860, 1184
CviQI GTAC 4 cut(s) 121, 538, 825, 1034
DdeI CTNAG 4 cut(s) 63, 1013, 1054, 1194
DinI GGCGCC 1 cut(s) 37
DpnI GATC 6 cut(s) 201, 251, 405, 687, 1182, 1341
DpnII GATC 6 cut(s) 199, 249, 403, 685, 1180, 1339
EaeI YGGCCR 3 cut(s) 856, 1086, 1359
Eam1104I CTCTTC 2 cut(s) 1202, 1236
EarI CTCTTC 2 cut(s) 1202, 1236
Eco130I CCWWGG 2 cut(s) 399, 651
Eco47I GGWCC 1 cut(s) 1304
Eco57I CTGAAG 2 cut(s) 710, 764
EcoO109I RGGNCCY 1 cut(s) 1304
EcoRII CCWGG 3 cut(s) 54, 1306, 1398
EcoT14I CCWWGG 2 cut(s) 399, 651
EgeI GGCGCC 1 cut(s) 37
EheI GGCGCC 1 cut(s) 37
ErhI CCWWGG 2 cut(s) 399, 651
FaeI CATG 4 cut(s) 263, 403, 863, 1187
FalI AAGNNNNNCTT 2 cut(s) 119, 151
FaqI GGGAC 1 cut(s) 683
FatI CATG 4 cut(s) 259, 399, 859, 1183
FblI GTMKAC 2 cut(s) 72, 561
Fnu4HI GCNGC 4 cut(s) 78, 1086, 1110, 1371
FokI GGATG 6 cut(s) 371, 453, 458, 608, 1016, 1408
Fsp4HI GCNGC 4 cut(s) 78, 1086, 1110, 1371
FspBI CTAG 4 cut(s) 228, 1347, 1407, 1447
GlaI GCGC 2 cut(s) 37, 657
GluI GCNGC 4 cut(s) 78, 1086, 1110, 1371
GsuI CTGGAG 1 cut(s) 442
HaeII RGCGCY 2 cut(s) 39, 659
HaeIII GGCC 4 cut(s) 585, 858, 1088, 1361
HapII CCGG 3 cut(s) 39, 90, 1320
HgaI GACGC 1 cut(s) 83
HhaI GCGC 2 cut(s) 38, 658
Hin1I GRCGYC 1 cut(s) 36
Hin1II CATG 4 cut(s) 263, 403, 863, 1187
Hin6I GCGC 2 cut(s) 36, 656
HinP1I GCGC 2 cut(s) 36, 656
HincII GTYRAC 3 cut(s) 73, 562, 1042
HindII GTYRAC 3 cut(s) 73, 562, 1042
HindIII AAGCTT 2 cut(s) 65, 746
HinfI GANTC 5 cut(s) 131, 183, 696, 883, 945
HpaI GTTAAC 1 cut(s) 1042
HpaII CCGG 3 cut(s) 39, 90, 1320
HphI GGTGA 6 cut(s) 388, 473, 611, 749, 809, 1216
Hpy166II GTNNAC 3 cut(s) 73, 562, 1042
Hpy188I TCNGA 3 cut(s) 626, 1057, 1290
Hpy188III TCNNGA 6 cut(s) 287, 502, 874, 1126, 1147, 1235
Hpy8I GTNNAC 3 cut(s) 73, 562, 1042
Hpy99I CGWCG 3 cut(s) 77, 566, 1172
HpyAV CCTTC 2 cut(s) 104, 967
HpyCH4III ACNGT 7 cut(s) 11, 569, 635, 818, 847, 1093, 1378
HpyCH4IV ACGT 4 cut(s) 277, 957, 1036, 1167
HpyF3I CTNAG 4 cut(s) 63, 1013, 1054, 1194
HpySE526I ACGT 4 cut(s) 277, 957, 1036, 1167
Hsp92I GRCGYC 1 cut(s) 36
Hsp92II CATG 4 cut(s) 263, 403, 863, 1187
HspAI GCGC 2 cut(s) 36, 656
KasI GGCGCC 1 cut(s) 35
KspAI GTTAAC 1 cut(s) 1042
Kzo9I GATC 6 cut(s) 199, 249, 403, 685, 1180, 1339
LmnI GCTCC 3 cut(s) 224, 472, 1408
Lsp1109I GCAGC 3 cut(s) 64, 1096, 1357
LweI GCATC 7 cut(s) 163, 349, 380, 436, 592, 994, 1129
MaeI CTAG 4 cut(s) 228, 1347, 1407, 1447
MaeII ACGT 4 cut(s) 277, 957, 1036, 1167
MaeIII GTNAC 6 cut(s) 20, 394, 610, 862, 1171, 1187
MalI GATC 6 cut(s) 201, 251, 405, 687, 1182, 1341
MbiI CCGCTC 1 cut(s) 515
MboI GATC 6 cut(s) 199, 249, 403, 685, 1180, 1339
MboII GAAGA 4 cut(s) 862, 1219, 1223, 1334
MfeI CAATTG 3 cut(s) 588, 978, 1296
MflI RGATCY 2 cut(s) 249, 1339
MhlI GDGCHC 1 cut(s) 1071
MlsI TGGCCA 2 cut(s) 858, 1361
MluNI TGGCCA 2 cut(s) 858, 1361
Mly113I GGCGCC 1 cut(s) 36
MlyI GAGTC 2 cut(s) 192, 705
MnlI CCTC 9 cut(s) 97, 431, 555, 907, 993, 1189, 1239, 1295, 1436
Mox20I TGGCCA 2 cut(s) 858, 1361
MscI TGGCCA 2 cut(s) 858, 1361
MseI TTAA 8 cut(s) 117, 126, 167, 219, 480, 849, 900, 1041
Msp20I TGGCCA 2 cut(s) 858, 1361
MspI CCGG 3 cut(s) 39, 90, 1320
MspR9I CCNGG 6 cut(s) 40, 56, 91, 1308, 1320, 1400
MunI CAATTG 3 cut(s) 588, 978, 1296
MvaI CCWGG 3 cut(s) 56, 1308, 1400
NarI GGCGCC 1 cut(s) 36
NciI CCSGG 3 cut(s) 40, 91, 1320
NcoI CCATGG 1 cut(s) 399
NdeII GATC 6 cut(s) 199, 249, 403, 685, 1180, 1339
NlaIII CATG 4 cut(s) 263, 403, 863, 1187
NlaIV GGNNCC 5 cut(s) 37, 251, 519, 1397, 1404
NmeAIII GCCGAG 2 cut(s) 12, 172
NmuCI GTSAC 4 cut(s) 20, 394, 862, 1171
NspI RCATGY 1 cut(s) 263
PasI CCCWGGG 1 cut(s) 55
PfeI GAWTC 3 cut(s) 131, 883, 945
PfoI TCCNGGA 2 cut(s) 89, 1306
PkrI GCNGC 4 cut(s) 79, 1087, 1111, 1372
PleI GAGTC 2 cut(s) 191, 704
PluTI GGCGCC 1 cut(s) 39
PpsI GAGTC 2 cut(s) 191, 704
Ppu21I YACGTR 1 cut(s) 1037
PpuMI RGGWCCY 1 cut(s) 1304
Psp5II RGGWCCY 1 cut(s) 1304
Psp6I CCWGG 3 cut(s) 54, 1306, 1398
PspGI CCWGG 3 cut(s) 54, 1306, 1398
PspN4I GGNNCC 5 cut(s) 37, 251, 519, 1397, 1404
PspPI GGNCC 2 cut(s) 584, 1304
PspPPI RGGWCCY 1 cut(s) 1304
PstI CTGCAG 2 cut(s) 839, 1180
PsuI RGATCY 2 cut(s) 249, 1339
RsaI GTAC 4 cut(s) 122, 539, 826, 1035
RsaNI GTAC 4 cut(s) 121, 538, 825, 1034
SalI GTCGAC 2 cut(s) 71, 560
SaqAI TTAA 8 cut(s) 117, 126, 167, 219, 480, 849, 900, 1041
SatI GCNGC 4 cut(s) 78, 1086, 1110, 1371
Sau3AI GATC 6 cut(s) 199, 249, 403, 685, 1180, 1339
Sau96I GGNCC 2 cut(s) 584, 1304
SchI GAGTC 2 cut(s) 192, 705
ScrFI CCNGG 6 cut(s) 40, 56, 91, 1308, 1320, 1400
SduI GDGCHC 1 cut(s) 1071
SfaNI GCATC 7 cut(s) 163, 349, 380, 436, 592, 994, 1129
SfcI CTRYAG 3 cut(s) 835, 1176, 1277
SfoI GGCGCC 1 cut(s) 37
SinI GGWCC 1 cut(s) 1304
SmlI CTYRAG 1 cut(s) 659
SmoI CTYRAG 1 cut(s) 659
SsiI CCGC 4 cut(s) 515, 1085, 1333, 1350
SspDI GGCGCC 1 cut(s) 35
SspMI CTAG 4 cut(s) 228, 1347, 1407, 1447
StyD4I CCNGG 6 cut(s) 38, 54, 89, 1306, 1318, 1398
StyI CCWWGG 2 cut(s) 399, 651
TaaI ACNGT 7 cut(s) 11, 569, 635, 818, 847, 1093, 1378
TaiI ACGT 4 cut(s) 280, 960, 1039, 1170
TaqI TCGA 5 cut(s) 72, 198, 561, 1146, 1431
TatI WGTACW 1 cut(s) 120
TauI GCSGC 1 cut(s) 1088
TfiI GAWTC 3 cut(s) 131, 883, 945
Tru1I TTAA 8 cut(s) 117, 126, 167, 219, 480, 849, 900, 1041
Tru9I TTAA 8 cut(s) 117, 126, 167, 219, 480, 849, 900, 1041
TscAI CASTG 6 cut(s) 16, 274, 574, 844, 1078, 1180
TseFI GTSAC 4 cut(s) 20, 394, 862, 1171
TseI GCWGC 3 cut(s) 77, 1109, 1370
Tsp45I GTSAC 4 cut(s) 20, 394, 862, 1171
TspDTI ATGAA 4 cut(s) 342, 986, 1131, 1397
TspGWI ACGGA 2 cut(s) 242, 812
TspRI CASTG 6 cut(s) 16, 274, 574, 844, 1078, 1180
VpaK11BI GGWCC 1 cut(s) 1304
XapI RAATTY 6 cut(s) 476, 705, 851, 927, 1161, 1257
XceI RCATGY 1 cut(s) 263
XmiI GTMKAC 2 cut(s) 72, 561
XspI CTAG 4 cut(s) 228, 1347, 1407, 1447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.