Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001570

Physical Location & Seq

Genomic Coordinates Reverse (-)

41861049 .. 41866962

Gene Structure 5914 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025085

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGACATGTCGTACGCAGCCCAAAAACAACAGCGCCTCCGCACGATCCGTTCTGCCCCGACGCGTGCCACTGCGCCCCACGCCGCCACGACCTCACGCAGTTTCGACCCCCACCACCGTGCCCCCCGTTGCCATAGCTCAAACCGTGAAGACCCGATCCAGAATCAAAGTGTTCGATTCTCTCTCTATCTCGACGCTTCTCTTCCGCACGTCACTGTTTACTCTGCCTCCGCCATTGTTGCGATTTTGTGAGAGACTGAGAAAGGAAAAAAAAAAAAAAATGGGCAGCGCCGGAGGCTCATGGAAATTGGCGGATCACCCGAAGCTTCCGAAGGGGAAGGTCATCGCGCTGATCGTGTTGGACGGTTGGGGCGAGGCCAAGCCCGATCAGTATAACTGTATCCACGTGGCGGAGACTCCCACCATGGATTCGCTTAAGAATGGTGTTCCGGACAAGTGGAGATTAGTGAGAGCTCATGGAACTGCTGTGGGGCTTCCTACAGAGGATGATATGGGCAACAGTGAGGTCGGTCACAACGCTCTTGGTGCTGGCCGTATTTTTGCACAGGGTGCAAAGCTCGTGGATTCAGCTCTTGAATCTGGAAAGATTTACCAAGGAGAAGGCTTCAAGTACATCAAGGAAGTGTTTGAGACCGGAACTTTGCATCTCATTGGGCTGTTGAGTGATGGCGGAGTCCATTCTCGGCTCGATCAAGTGCAGTTGTTGCTTAAAGGAGCTGCTGAGCATGGTGCTAAGAGGATCCGTCTTCATGTTCTTACTGATGGCCGTGATGTTCTGGATGGCTCAAGTGTGAAATTTGCTGAAACACTTGAAGAGGACCTTGCAAAGTTACGTGAGAAGGGTGTAGATGCACAGATTGCATCTGGTGGAGGTCGCATGTACGTCACCATGGATCGTTATGAGAATGACTGGTCAGTTGTAAAACGAGGATGGGATGCCCAAGTTCTTGGTGAAGCCCCCTATAAATTTAAGAATGCTGTTGAAGCTATCAAGACATTGAGAGCAGAACCAAATGCCAATGACCAGTATCTACCTCCTTTTGTTATTGTTGATGACAGTGGAAAGCCTGTGGGCCCAATAGTTGATGGTGATGCTGTTGTAACATTCAACTTCCGAGCAGATCGTATGGTCATGGCTGCTAAGGCATTTGAGTATGCAGATTTTGATAAATTCGATAGAGTTCGAGTTCCTAAAATCCGTTATGCTGGTATGCTTCAGTATGATGGTGAGCTGAAGCTTCCAACCCGTTACCTTGTAGAACCCCCAGAGATTGATAGAACATCCGGGGAATATCTAACTTACAACGGTGTCCGTACTTTTGCCTGCAGTGAGACTGTAAAATTTGGCCATGTTACTTTCTTCTGGAATGGGAATCGCTCTGGATGCTTTAACCCTGAAATGGAGGAATATGTGGAAATTCCAAGTGATAGTGGAATCTCATTCAACGTCCAGCCAAAGATGAAGGCATTGGAGATTGCTGAAAAGGCAAGGGATGCTATTCTGAGCAAGAAGTTTGAGCAGGTACGTGTTAACCTACCCAATGGGGACATGGTGGGGCATACTGGTGACGTTGAGGCCACAATTGTTGCTTGCAAGGCTGCTGATGAAGCTGTCAAGATGATTCTTGATGCGGTAGAGCAAGCGGGTGGAATTTATGTTGTTACAGCTGATCATGGCAATGCCGAGGATATGGTGAAGAGAAATAAGACCGGGGGACCACTTCTTGACAAGAGTGGCAACATCCAAATCCTTACCTCCCACACTCTTCAACCAGTTCCCATTGCTATTGGAGGCCCCGGACTGGCACCTGGTGTTCGGTTCCGCAACGATCTTCCGAGAGGTGGTCTTGCCAATGTTGCTGCAACTATGATGAATCTGCATGGATTTGAGGCCCCTGCTGACTATGAGCCGTCCCTCATTGAAGTTGTTGATAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004619 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0007275 GO:0008150 GO:0009266 GO:0009409 GO:0009506 GO:0009507 GO:0009536 GO:0009555 GO:0009628 GO:0009987 GO:0010035 GO:0010038 GO:0010118 GO:0016020 GO:0016853 GO:0016866 GO:0016868 GO:0030054 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046537 GO:0046686 GO:0048046 GO:0048229 GO:0048856 GO:0050896 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00010 ko00260 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00010 map00260 map00680 map01100 map01110 map01120 map01130 map01200 map01230

Pfam Domains

Protein Families

Metalloenzyme iPGM_N

Protein Analysis

653

Amino Acids

71.31

Weight (kDa)

8.03

Isoelectric Point (pI)

30.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Metalloenzyme	PF01676	114 - 637	3.6e-88	Metalloenzyme superfamily
iPGM_N	PF06415	194 - 415	3.4e-57	BPG-independent PGAM N-terminus (iPGM_N)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09780 AT3G08590 AT3G08590
fragaria_vesca	FvH4_6g09180 FvH4_6g09180 FvH4_6g09180
malus_domestica	MD04G1180100.v1.1 MD12G1195300.v1.1
prunus_persica	Prupe.6G300000_v2.0.a1 Prupe.6G300000_v2.0.a1 Prupe.6G300000_v2.0.a1
pyrus_communis	pycom04g15930 pycom12g18160
rosa_chinensis	RchiOBHm_Chr2g0154971 RchiOBHm_Chr2g0154981 RchiOBHm_Chr3g0459381 RchiOBHm_Chr3g0467071 RchiOBHm_Chr5g0071081 RchiOBHm_Chr6g0301401
rosa_laevigata	RLG00000020806 RLG00000025085 RLG00000033543
rosa_multiflora	Rmu_sc0000240.1_g000005 Rmu_sc0001304.1_g000020 Rmu_sc0004018.1_g000005 Rmu_sc0007705.1_g000010 Rmu_sc0014417.1_g000008 Rmu_ssc0000065.1_g000007
rosa_roxburghii	Rroxscaffold_2G00122270 Rroxscaffold_3G00253790 Rroxscaffold_6G00420200
rosa_rugosa	Rorug03G0036100 Rorug03G0036200 Rorug03G0036200 Rorug05G0003600 Rorug05G0003600 Rorug05G0003700
rosa_samantha	Rh3AG094000 Rh3AG133200 Rh3BG154300 Rh3CG098200 Rh3CG308400 Rh3DG097700 Rh4CG280400 Rh5BG093900 Rh5BG235100 Rh6AG418000 Rh6CG431600
rosa_wichuraiana	Rw3G008090 Rw6G036180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1531
AccB1I	GGYRCC	1 cut(s)	1825
AccII	CGCG	2 cut(s)	63, 347
AccIII	TCCGGA	1 cut(s)	448
AclWI	GGATC	6 cut(s)	39, 150, 321, 754, 767, 921
AcoI	YGGCCR	3 cut(s)	550, 784, 1366
AcsI	RAATTY	6 cut(s)	815, 986, 1190, 1361, 1437, 1671
AcuI	CTGAAG	2 cut(s)	1220, 1274
AcvI	CACGTG	1 cut(s)	406
AdeI	CACNNNGTG	2 cut(s)	569, 1832
AfaI	GTAC	5 cut(s)	13, 632, 902, 1336, 1545
AfiI	CCNNNNNNNGG	4 cut(s)	409, 1420, 1822, 1862
AflII	CTTAAG	1 cut(s)	434
AflIII	ACRYGT	3 cut(s)	5, 61, 1546
AgsI	TTSAA	8 cut(s)	596, 628, 833, 1004, 1129, 1465, 1790, 1943
AjiI	CACGTC	1 cut(s)	210
AjnI	CCWGG	1 cut(s)	1828
AleI	CACNNNNGTG	1 cut(s)	116
Alw21I	GWGCWC	1 cut(s)	475
Alw26I	GTCTC	4 cut(s)	247, 407, 644, 1346
AlwI	GGATC	6 cut(s)	39, 150, 321, 754, 767, 921
Aor13HI	TCCGGA	1 cut(s)	448
AoxI	GGCC	8 cut(s)	375, 550, 784, 1093, 1366, 1596, 1813, 1911
ApaI	GGGCCC	1 cut(s)	1097
ApeKI	GCWGC	6 cut(s)	16, 285, 737, 1157, 1619, 1880
ApoI	RAATTY	6 cut(s)	815, 986, 1190, 1361, 1437, 1671
ArsI	GACNNNNNNTTYG	2 cut(s)	643, 675
AspLEI	GCGC	4 cut(s)	35, 75, 290, 349
AspS9I	GGNCC	6 cut(s)	838, 1093, 1094, 1736, 1814, 1912
AsuC2I	CCSGG	3 cut(s)	1306, 1732, 1818
AsuHPI	GGTGA	7 cut(s)	308, 898, 983, 1121, 1259, 1598, 1726
AvaII	GGWCC	2 cut(s)	838, 1736
BaeGI	GKGCMC	2 cut(s)	123, 1097
BalI	TGGCCA	1 cut(s)	1368
BamHI	GGATCC	1 cut(s)	759
BanI	GGYRCC	1 cut(s)	1825
BanII	GRGCYC	2 cut(s)	475, 1097
BauI	CACGAG	1 cut(s)	578
BbrPI	CACGTG	1 cut(s)	406
BbsI	GAAGAC	2 cut(s)	155, 758
Bbv12I	GWGCWC	1 cut(s)	475
BbvI	GCAGC	6 cut(s)	28, 297, 724, 1144, 1606, 1867
BccI	CCATC	6 cut(s)	680, 776, 794, 945, 1100, 1238
BceAI	ACGGC	3 cut(s)	537, 771, 1915
BciT130I	CCWGG	1 cut(s)	1830
BciVI	GTATCC	1 cut(s)	410
BclI	TGATCA	1 cut(s)	1690
BcnI	CCSGG	3 cut(s)	1306, 1732, 1818
BcoDI	GTCTC	4 cut(s)	247, 407, 644, 1346
BfaI	CTAG	1 cut(s)	1957
BfmI	CTRYAG	2 cut(s)	498, 1345
BfoI	RGCGCY	2 cut(s)	36, 291
BfrI	CTTAAG	1 cut(s)	434
BfuAI	ACCTGC	1 cut(s)	1531
BfuI	GTATCC	1 cut(s)	410
BisI	GCNGC	7 cut(s)	17, 83, 286, 738, 1158, 1620, 1881
BlpI	GCTNAGC	1 cut(s)	741
BlsI	GCNGC	7 cut(s)	18, 84, 287, 739, 1159, 1621, 1882
Bme1390I	CCNGG	4 cut(s)	1306, 1732, 1818, 1830
Bme18I	GGWCC	2 cut(s)	838, 1736
BmgBI	CACGTC	1 cut(s)	210
BmgT120I	GGNCC	6 cut(s)	838, 1093, 1094, 1736, 1814, 1912
BmiI	GGNNCC	7 cut(s)	761, 1095, 1737, 1816, 1827, 1841, 1914
BmrFI	CCNGG	4 cut(s)	1306, 1732, 1818, 1830
BmsI	GCATC	8 cut(s)	673, 859, 890, 946, 1102, 1394, 1504, 1639
BpiI	GAAGAC	2 cut(s)	155, 758
Bpu10I	CCTNAGC	1 cut(s)	1161
Bpu1102I	GCTNAGC	1 cut(s)	741
BpuEI	CTTGAG	1 cut(s)	790
BpuMI	CCSGG	3 cut(s)	1306, 1732, 1818
BsaAI	YACGTR	3 cut(s)	406, 854, 1547
BsaI	GGTCTC	1 cut(s)	644
BsaJI	CCNNGG	7 cut(s)	423, 613, 909, 1305, 1704, 1731, 1816
BsaWI	WCCGGW	2 cut(s)	448, 653
BsaXI	ACNNNNNCTCC	4 cut(s)	20, 50, 211, 241
Bsc4I	CCNNNNNNNGG	4 cut(s)	409, 1420, 1822, 1862
Bse1I	ACTGG	5 cut(s)	935, 1045, 1588, 1793, 1827
Bse3DI	GCAATG	2 cut(s)	1705, 1800
BseAI	TCCGGA	1 cut(s)	448
BseBI	CCWGG	1 cut(s)	1830
BseDI	CCNNGG	7 cut(s)	423, 613, 909, 1305, 1704, 1731, 1816
BseGI	GGATG	8 cut(s)	511, 805, 956, 961, 1301, 1409, 1519, 1761
BseLI	CCNNNNNNNGG	4 cut(s)	409, 1420, 1822, 1862
BseMI	GCAATG	2 cut(s)	1705, 1800
BseMII	CTCAG	3 cut(s)	248, 732, 1514
BseNI	ACTGG	5 cut(s)	935, 1045, 1588, 1793, 1827
BseSI	GKGCMC	2 cut(s)	123, 1097
BseXI	GCAGC	6 cut(s)	28, 297, 724, 1144, 1606, 1867
BsgI	GTGCAG	1 cut(s)	737
Bsh1236I	CGCG	2 cut(s)	63, 347
BshFI	GGCC	8 cut(s)	377, 552, 786, 1095, 1368, 1598, 1815, 1913
BshNI	GGYRCC	1 cut(s)	1825
BsiHKAI	GWGCWC	1 cut(s)	475
BsiSI	CCGG	6 cut(s)	291, 449, 654, 1305, 1731, 1818
BsiWI	CGTACG	1 cut(s)	11
BslFI	GGGAC	3 cut(s)	1580, 1749, 1918
BslI	CCNNNNNNNGG	4 cut(s)	409, 1420, 1822, 1862
BsmAI	GTCTC	4 cut(s)	247, 407, 644, 1346
BsmFI	GGGAC	3 cut(s)	1580, 1749, 1918
BsmI	GAATGC	1 cut(s)	1000
BsnI	GGCC	8 cut(s)	377, 552, 786, 1095, 1368, 1598, 1815, 1913
Bso31I	GGTCTC	1 cut(s)	644
Bsp120I	GGGCCC	1 cut(s)	1093
Bsp1286I	GDGCHC	3 cut(s)	123, 475, 1097
Bsp13I	TCCGGA	1 cut(s)	448
Bsp1720I	GCTNAGC	1 cut(s)	741
Bsp19I	CCATGG	2 cut(s)	423, 909
BspANI	GGCC	8 cut(s)	377, 552, 786, 1095, 1368, 1598, 1815, 1913
BspCNI	CTCAG	3 cut(s)	249, 733, 1515
BspEI	TCCGGA	1 cut(s)	448
BspFNI	CGCG	2 cut(s)	63, 347
BspLI	GGNNCC	7 cut(s)	761, 1095, 1737, 1816, 1827, 1841, 1914
BspMAI	CTGCAG	1 cut(s)	1349
BspMI	ACCTGC	1 cut(s)	1531
BspPI	GGATC	6 cut(s)	39, 150, 321, 754, 767, 921
BspT107I	GGYRCC	1 cut(s)	1825
BspTI	CTTAAG	1 cut(s)	434
BspTNI	GGTCTC	1 cut(s)	644
BsrDI	GCAATG	2 cut(s)	1705, 1800
BsrI	ACTGG	5 cut(s)	935, 1045, 1588, 1793, 1827
BssECI	CCNNGG	7 cut(s)	423, 613, 909, 1305, 1704, 1731, 1816
BssSI	CACGAG	1 cut(s)	578
BssT1I	CCWWGG	3 cut(s)	423, 613, 909
Bst2BI	CACGAG	1 cut(s)	578
Bst2UI	CCWGG	1 cut(s)	1830
Bst4CI	ACNGT	9 cut(s)	118, 145, 216, 365, 398, 521, 1079, 1328, 1357
Bst6I	CTCTTC	4 cut(s)	206, 828, 1712, 1791
BstAFI	CTTAAG	1 cut(s)	434
BstAPI	GCANNNNNTGC	4 cut(s)	569, 724, 878, 1514
BstBAI	YACGTR	3 cut(s)	406, 854, 1547
BstC8I	GCNNGC	5 cut(s)	65, 550, 1345, 1612, 1662
BstDEI	CTNAG	5 cut(s)	257, 741, 753, 1161, 1523
BstDSI	CCRYGG	2 cut(s)	423, 909
BstF5I	GGATG	8 cut(s)	511, 805, 956, 961, 1301, 1409, 1519, 1761
BstFNI	CGCG	2 cut(s)	63, 347
BstH2I	RGCGCY	2 cut(s)	36, 291
BstHHI	GCGC	4 cut(s)	35, 75, 290, 349
BstMAI	GTCTC	4 cut(s)	247, 407, 644, 1346
BstNI	CCWGG	1 cut(s)	1830
BstNSI	RCATGY	2 cut(s)	9, 901
BstSCI	CCNGG	4 cut(s)	1304, 1730, 1816, 1828
BstSFI	CTRYAG	2 cut(s)	498, 1345
BstSLI	GKGCMC	2 cut(s)	123, 1097
BstUI	CGCG	2 cut(s)	63, 347
BstV1I	GCAGC	6 cut(s)	28, 297, 724, 1144, 1606, 1867
BstV2I	GAAGAC	2 cut(s)	155, 758
BstX2I	RGATCY	1 cut(s)	759
BstXI	CCANNNNNNTGG	1 cut(s)	968
BstYI	RGATCY	1 cut(s)	759
BsuI	GTATCC	1 cut(s)	410
BsuRI	GGCC	8 cut(s)	377, 552, 786, 1095, 1368, 1598, 1815, 1913
BtgI	CCRYGG	2 cut(s)	423, 909
BtgZI	GCGATG	1 cut(s)	328
BtrI	CACGTC	1 cut(s)	210
BtsCI	GGATG	8 cut(s)	511, 805, 956, 961, 1301, 1409, 1519, 1761
BtsI	GCAGTG	2 cut(s)	68, 1354
BtsIMutI	CAGTG	5 cut(s)	68, 212, 526, 1084, 1354
BveI	ACCTGC	1 cut(s)	1531
Cac8I	GCNNGC	5 cut(s)	65, 550, 1345, 1612, 1662
CfoI	GCGC	4 cut(s)	35, 75, 290, 349
Cfr13I	GGNCC	6 cut(s)	838, 1093, 1094, 1736, 1814, 1912
CseI	GACGC	2 cut(s)	69, 202
CsiI	ACCWGGT	1 cut(s)	1828
Csp6I	GTAC	5 cut(s)	12, 631, 901, 1335, 1544
CspCI	CAANNNNNGTGG	4 cut(s)	561, 596, 1588, 1623
CviQI	GTAC	5 cut(s)	12, 631, 901, 1335, 1544
DdeI	CTNAG	5 cut(s)	257, 741, 753, 1161, 1523
DraIII	CACNNNGTG	2 cut(s)	569, 1832
EaeI	YGGCCR	3 cut(s)	550, 784, 1366
Eam1104I	CTCTTC	4 cut(s)	206, 828, 1712, 1791
EarI	CTCTTC	4 cut(s)	206, 828, 1712, 1791
EciI	GGCGGA	4 cut(s)	219, 326, 425, 705
Ecl136II	GAGCTC	1 cut(s)	473
Eco130I	CCWWGG	3 cut(s)	423, 613, 909
Eco24I	GRGCYC	2 cut(s)	475, 1097
Eco31I	GGTCTC	1 cut(s)	644
Eco47I	GGWCC	2 cut(s)	838, 1736
Eco53kI	GAGCTC	1 cut(s)	473
Eco57I	CTGAAG	2 cut(s)	1220, 1274
Eco72I	CACGTG	1 cut(s)	406
EcoICRI	GAGCTC	1 cut(s)	473
EcoO109I	RGGNCCY	3 cut(s)	838, 1814, 1912
EcoRII	CCWGG	1 cut(s)	1828
EcoT14I	CCWWGG	3 cut(s)	423, 613, 909
EcoT38I	GRGCYC	2 cut(s)	475, 1097
ErhI	CCWWGG	3 cut(s)	423, 613, 909
FalI	AAGNNNNNCTT	2 cut(s)	825, 857
FaqI	GGGAC	3 cut(s)	1580, 1749, 1918
FauI	CCCGC	1 cut(s)	1657
FbaI	TGATCA	1 cut(s)	1690
Fnu4HI	GCNGC	7 cut(s)	17, 83, 286, 738, 1158, 1620, 1881
FokI	GGATG	8 cut(s)	518, 812, 963, 968, 1288, 1416, 1526, 1748
FriOI	GRGCYC	2 cut(s)	475, 1097
Fsp4HI	GCNGC	7 cut(s)	17, 83, 286, 738, 1158, 1620, 1881
FspBI	CTAG	1 cut(s)	1957
GlaI	GCGC	4 cut(s)	34, 74, 289, 348
GluI	GCNGC	7 cut(s)	17, 83, 286, 738, 1158, 1620, 1881
HaeII	RGCGCY	2 cut(s)	36, 291
HaeIII	GGCC	8 cut(s)	377, 552, 786, 1095, 1368, 1598, 1815, 1913
HapII	CCGG	6 cut(s)	291, 449, 654, 1305, 1731, 1818
HgaI	GACGC	2 cut(s)	69, 202
HhaI	GCGC	4 cut(s)	35, 75, 290, 349
Hin6I	GCGC	4 cut(s)	33, 73, 288, 347
HinP1I	GCGC	4 cut(s)	33, 73, 288, 347
HincII	GTYRAC	1 cut(s)	1552
HindII	GTYRAC	1 cut(s)	1552
HindIII	AAGCTT	2 cut(s)	323, 1256
HpaI	GTTAAC	1 cut(s)	1552
HpaII	CCGG	6 cut(s)	291, 449, 654, 1305, 1731, 1818
HphI	GGTGA	7 cut(s)	308, 898, 983, 1121, 1259, 1598, 1726
Hpy166II	GTNNAC	2 cut(s)	219, 1552
Hpy188I	TCNGA	4 cut(s)	330, 1136, 1524, 1857
Hpy8I	GTNNAC	2 cut(s)	219, 1552
Hpy99I	CGWCG	2 cut(s)	63, 196
HpyAV	CCTTC	5 cut(s)	325, 331, 614, 853, 1477
HpyCH4III	ACNGT	9 cut(s)	118, 145, 216, 365, 398, 521, 1079, 1328, 1357
HpyCH4IV	ACGT	7 cut(s)	209, 405, 853, 903, 1467, 1546, 1590
HpyF3I	CTNAG	5 cut(s)	257, 741, 753, 1161, 1523
HpySE526I	ACGT	7 cut(s)	209, 405, 853, 903, 1467, 1546, 1590
HspAI	GCGC	4 cut(s)	33, 73, 288, 347
Kpn2I	TCCGGA	1 cut(s)	448
Ksp22I	TGATCA	1 cut(s)	1690
KspAI	GTTAAC	1 cut(s)	1552
LmnI	GCTCC	1 cut(s)	734
Lsp1109I	GCAGC	6 cut(s)	28, 297, 724, 1144, 1606, 1867
LweI	GCATC	8 cut(s)	673, 859, 890, 946, 1102, 1394, 1504, 1639
MabI	ACCWGGT	1 cut(s)	1828
MaeI	CTAG	1 cut(s)	1957
MaeII	ACGT	7 cut(s)	209, 405, 853, 903, 1467, 1546, 1590
MaeIII	GTNAC	9 cut(s)	210, 530, 849, 904, 1120, 1268, 1372, 1586, 1681
MboII	GAAGA	8 cut(s)	160, 193, 758, 845, 1372, 1729, 1778, 1844
MfeI	CAATTG	1 cut(s)	1602
MflI	RGATCY	1 cut(s)	759
MhlI	GDGCHC	3 cut(s)	123, 475, 1097
MlsI	TGGCCA	1 cut(s)	1368
MluCI	AATT	8 cut(s)	305, 815, 986, 1190, 1361, 1437, 1602, 1671
MluI	ACGCGT	1 cut(s)	61
MluNI	TGGCCA	1 cut(s)	1368
MlyI	GAGTC	2 cut(s)	409, 702
MmeI	TCCRAC	2 cut(s)	339, 1286
Mox20I	TGGCCA	1 cut(s)	1368
MroI	TCCGGA	1 cut(s)	448
MscI	TGGCCA	1 cut(s)	1368
MseI	TTAA	5 cut(s)	435, 729, 990, 1410, 1551
MslI	CAYNNNNRTG	3 cut(s)	116, 1584, 1698
Msp20I	TGGCCA	1 cut(s)	1368
MspA1I	CMGCKG	1 cut(s)	1688
MspCI	CTTAAG	1 cut(s)	434
MspI	CCGG	6 cut(s)	291, 449, 654, 1305, 1731, 1818
MspR9I	CCNGG	4 cut(s)	1306, 1732, 1818, 1830
MunI	CAATTG	1 cut(s)	1602
Mva1269I	GAATGC	1 cut(s)	1000
MvaI	CCWGG	1 cut(s)	1830
MvnI	CGCG	2 cut(s)	63, 347
NciI	CCSGG	3 cut(s)	1306, 1732, 1818
NcoI	CCATGG	2 cut(s)	423, 909
NlaIV	GGNNCC	7 cut(s)	761, 1095, 1737, 1816, 1827, 1841, 1914
NmeAIII	GCCGAG	2 cut(s)	682, 1729
NmuCI	GTSAC	4 cut(s)	210, 530, 904, 1586
NspI	RCATGY	2 cut(s)	9, 901
OliI	CACNNNNGTG	1 cut(s)	116
PciI	ACATGT	1 cut(s)	5
PcsI	WCGNNNNNNNCGW	2 cut(s)	351, 369
PctI	GAATGC	1 cut(s)	1000
PfeI	GAWTC	9 cut(s)	162, 176, 428, 584, 596, 1393, 1455, 1642, 1894
Pfl23II	CGTACG	1 cut(s)	11
PkrI	GCNGC	7 cut(s)	18, 84, 287, 739, 1159, 1621, 1882
PleI	GAGTC	2 cut(s)	409, 701
PmaCI	CACGTG	1 cut(s)	406
PmlI	CACGTG	1 cut(s)	406
PpsI	GAGTC	2 cut(s)	409, 701
Ppu21I	YACGTR	3 cut(s)	406, 854, 1547
PpuMI	RGGWCCY	1 cut(s)	838
PscI	ACATGT	1 cut(s)	5
Psp124BI	GAGCTC	1 cut(s)	475
Psp5II	RGGWCCY	1 cut(s)	838
Psp6I	CCWGG	1 cut(s)	1828
PspCI	CACGTG	1 cut(s)	406
PspGI	CCWGG	1 cut(s)	1828
PspLI	CGTACG	1 cut(s)	11
PspN4I	GGNNCC	7 cut(s)	761, 1095, 1737, 1816, 1827, 1841, 1914
PspOMI	GGGCCC	1 cut(s)	1093
PspPI	GGNCC	6 cut(s)	838, 1093, 1094, 1736, 1814, 1912
PspPPI	RGGWCCY	1 cut(s)	838
PstI	CTGCAG	1 cut(s)	1349
PsuI	RGATCY	1 cut(s)	759
PvuII	CAGCTG	1 cut(s)	1688
RsaI	GTAC	5 cut(s)	13, 632, 902, 1336, 1545
RsaNI	GTAC	5 cut(s)	12, 631, 901, 1335, 1544
RseI	CAYNNNNRTG	3 cut(s)	116, 1584, 1698
SacI	GAGCTC	1 cut(s)	475
SaqAI	TTAA	5 cut(s)	435, 729, 990, 1410, 1551
SatI	GCNGC	7 cut(s)	17, 83, 286, 738, 1158, 1620, 1881
Sau96I	GGNCC	6 cut(s)	838, 1093, 1094, 1736, 1814, 1912
SchI	GAGTC	2 cut(s)	409, 702
ScrFI	CCNGG	4 cut(s)	1306, 1732, 1818, 1830
SduI	GDGCHC	3 cut(s)	123, 475, 1097
SexAI	ACCWGGT	1 cut(s)	1828
SfaNI	GCATC	8 cut(s)	673, 859, 890, 946, 1102, 1394, 1504, 1639
SfcI	CTRYAG	2 cut(s)	498, 1345
SinI	GGWCC	2 cut(s)	838, 1736
SmiMI	CAYNNNNRTG	3 cut(s)	116, 1584, 1698
SmlI	CTYRAG	2 cut(s)	434, 805
SmoI	CTYRAG	2 cut(s)	434, 805
Sse9I	AATT	8 cut(s)	305, 815, 986, 1190, 1361, 1437, 1602, 1671
SspMI	CTAG	1 cut(s)	1957
SstI	GAGCTC	1 cut(s)	475
StyD4I	CCNGG	4 cut(s)	1304, 1730, 1816, 1828
StyI	CCWWGG	3 cut(s)	423, 613, 909
TaaI	ACNGT	9 cut(s)	118, 145, 216, 365, 398, 521, 1079, 1328, 1357
TaiI	ACGT	7 cut(s)	212, 408, 856, 906, 1470, 1549, 1593
TaqI	TCGA	6 cut(s)	104, 174, 191, 708, 1194, 1204
TaqII	GACCGA	1 cut(s)	518
TasI	AATT	8 cut(s)	305, 815, 986, 1190, 1361, 1437, 1602, 1671
TatI	WGTACW	1 cut(s)	630
TauI	GCSGC	1 cut(s)	85
TfiI	GAWTC	9 cut(s)	162, 176, 428, 584, 596, 1393, 1455, 1642, 1894
Tru1I	TTAA	5 cut(s)	435, 729, 990, 1410, 1551
Tru9I	TTAA	5 cut(s)	435, 729, 990, 1410, 1551
TscAI	CASTG	5 cut(s)	75, 219, 526, 1084, 1354
TseFI	GTSAC	4 cut(s)	210, 530, 904, 1586
TseI	GCWGC	6 cut(s)	16, 285, 737, 1157, 1619, 1880
Tsp45I	GTSAC	4 cut(s)	210, 530, 904, 1586
TspDTI	ATGAA	4 cut(s)	758, 1496, 1641, 1907
TspGWI	ACGGA	4 cut(s)	37, 752, 1208, 1322
TspRI	CASTG	5 cut(s)	75, 219, 526, 1084, 1354
Vha464I	CTTAAG	1 cut(s)	434
VpaK11BI	GGWCC	2 cut(s)	838, 1736
XapI	RAATTY	6 cut(s)	815, 986, 1190, 1361, 1437, 1671
XceI	RCATGY	2 cut(s)	9, 901
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1567
XspI	CTAG	1 cut(s)	1957

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.