Rorug05G0003700

Catalyzes xyloglucan endohydrolysis (XEH) and or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000406
Physical Location & Seq
Forward (+)
251505 .. 254798
3294 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0003700.1

Sequence Viewer

Length: 1731 bp
ATGGACTTAGACGTCAACGTTTCGCGGTGGGTCCTCGAGTTCCTCTTCCGTGACCGCGAGAAGGAGAGCGTCGCTAAGCGAGTCCTCGGCGTCTTGCCGCTCTCGAACCACGACTGGCGGTTGAAGAAGACCCTCCTCCTCCGAACAATCGAGTCCCAAATCTTGGACGAGGCTTCTGTCACCGAAACCCTCCTCGAATCCTTGGAGTCCATCGAGGCTCTGGACCGCGGCCAAGGGCTCCCGATCACGGACTCAATGAGAGCGGCCTACTGCGCCGTGGCGACGGATTGCACGGTCAAGTTTTTGGCTGGCTTCAGAGGGAAGCCGAGTGGAAAGTACATGGAGGCAGTCGATCGGATTTGGAGGGGTAGGGTTAGGATTTTGGAGGAGTCTGAGGGTTGCGAGCTGGTATCGGCTGAGTTGAAGGAGACAAGGGATGAGGTGGAGGCTGGGATTTGGGATATCAAGGTTTCTAAGAAGCTAGCGAGCCTCAACACTAGAAATGATGCGCTGGCATTGGTTGCGGCGTATGTGGAGGAAGCTTTGGGGATCCTGGGTCCTCCGTTTATTGCTTGGGCTGTTAGATTTAATATGCACAAGGGTAGTTTAAGCTCGGAAGCTGATCAGGTTGCAGTGGACAGTGATGGTAATGCGGGTGCGAATGGGGCTGATTTGGACGTGCAAATGGGGAATGTGGTTGATTTGGGTGATGGCTCCAAATTGGAGGTGAATGGGGCTAATGTGCGTGAATTGGAAGCGCAGAGAGGAGCTAATGTCAATTCTGCGTCTGAACAGGAGGCACAAAGGGCGAATGGGCCTAATGTCAATTCGGAGTCTGAATTATTAGAGGCACAAAGGGTGAATGGGGCAAATGATGGTAGTGCTAGGTCTGAACAGGAGCCGCAAAGGGCTAAGGGGGCTAATGTTAGTGATGCCTGTGAACGGAATGTGGGTGATGAGTCTGCATCACAAATTGTGACTGTAGCTTATTTCAATTCTAGGTCTGAAATGGATCACCATACTATGAATGGTGTTCAATTGCAGATAGTGGGGGCAGAAAGGTCGCCACCTAATGGAAACCATCGTGTCCTCAGCTCTGAACCTGCAACTAAAGAGAAAGAAACTCCAAGGAGCACGGCACTTAGACGCAGGCATGGACCAGTTAAGATTAGAGATGCTGAAGATGTGGGTATGGAAGCATCAGCTCGCATATATAACTCAGTGTCTAGTGCTGAAGTTAGAAAAGTGCAAGAAGAACTCAAGTCCAGTGTTTTGGCTCTACAAGCTGTAGTGACAGACCCACTTCCTTATGCTTTGCGCAAGTCGGAAATTGTAAGATCTGAGTTGGGAATGAGACCTGTGGATCATGTAAGCGGAGAAAATGGAGGTGCAGCAAATCCATCTGTTGCAAAGTGCACTGAGCCTGATCAGTTTAATAATGATAATCATGGAAACCACACCAGTCATCAGAATGATGTTCCCCAACCTAGTGGAAAAGAAAATGATGCACCAAATCTGTCTGTTGACAAGGGAAAGGGCACGGATTATGTTCAGACGGGTGATGTCAATCCTGGAAATCCATCTTGCAGTTTTCAGAATAATGTTTCCCGAGCTGGCTTGATGGAACGTAATAGTACTGCCCATACTTATGAGGTATGTCATCTGAACAAACAAATAGTAAGGGGAGGCTTCACCTACCTAGTCCAAAAAGGAATGCTGTTTCTCCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_hydro_16 XET_C

Protein Analysis

576

Amino Acids

62.72

Weight (kDa)

5.3

Isoelectric Point (pI)

38.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000406)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23730 AT4G14130
fragaria_vesca FvH4_3g06510 FvH4_4g12960 FvH4_6g38150 FvH4_6g38150 FvH4_6g38150 FvH4_6g38160 FvH4_6g38170 FvH4_6g38181 FvH4_6g38190
malus_domestica MD04G1020100.v1.1 MD09G1152400.v1.1 MD09G1152600.v1.1 MD09G1152700.v1.1 MD17G1139900.v1.1 MD17G1140000.v1.1
prunus_persica Prupe.1G169700_v2.0.a1 Prupe.3G171500_v2.0.a1 Prupe.3G171600_v2.0.a1 Prupe.3G171700_v2.0.a1 Prupe.3G171800_v2.0.a1 Prupe.3G172000_v2.0.a1 Prupe.3G172100_v2.0.a1 Prupe.4G072800_v2.0.a1
pyrus_communis pycom04g01620 pycom09g07160 pycom09g07220 pycom09g07230 pycom10g22480 pycom13g29190 pycom17g13320
rosa_chinensis RchiOBHm_Chr2g0151371 RchiOBHm_Chr2g0151381 RchiOBHm_Chr2g0151401 RchiOBHm_Chr2g0151421 RchiOBHm_Chr2g0151431 RchiOBHm_Chr2g0151441 RchiOBHm_Chr2g0152071 RchiOBHm_Chr4g0412651 RchiOBHm_Chr5g0012671
rosa_laevigata RLG00000008270 RLG00000020544 RLG00000020546 RLG00000020547 RLG00000020548 RLG00000020549 RLG00000020605 RLG00000031947
rosa_multiflora Rmu_co8167812.1_g000001 Rmu_co8363165.1_g000001 Rmu_co8513985.1_g000001 Rmu_sc0000940.1_g000002 Rmu_sc0000940.1_g000005 Rmu_sc0000940.1_g000006 Rmu_sc0000940.1_g000009 Rmu_sc0002516.1_g000015 Rmu_sc0002516.1_g000017 Rmu_sc0002516.1_g000018 Rmu_sc0043125.1_g000001
rosa_roxburghii Rroxscaffold_1G00063930 Rroxscaffold_2G00095990 Rroxscaffold_2G00096470 Rroxscaffold_2G00096480 Rroxscaffold_2G00096490 Rroxscaffold_2G00096500 Rroxscaffold_5G00356830
rosa_rugosa Rorug02G0425600 Rorug02G0425700 Rorug02G0425800 Rorug02G0425900 Rorug02G0430500 Rorug02G0430600 Rorug04G0115400 Rorug05G0003700
rosa_samantha Rh2BG499200 Rh2CG472700 Rh2CG472800 Rh2CG473000 Rh2CG473100 Rh2CG473300 Rh2CG477800 Rh2DG509800 Rh2DG509900 Rh2DG510100 Rh2DG510200 Rh2DG510300 Rh2DG515000 Rh4AG174700 Rh4BG174000 Rh5AG097500
rosa_wichuraiana Rw2G039850 Rw2G039860 Rw2G039870 Rw2G039880 Rw2G039890 Rw2G039900 Rw2G040400 Rw4G014650 Rw5G008540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 11
AatII GACGTC 1 cut(s) 15
Acc16I TGCGCA 1 cut(s) 1319
Acc36I ACCTGC 1 cut(s) 1111
AccB7I CCANNNNNTGG 2 cut(s) 163, 1073
AccBSI CCGCTC 2 cut(s) 100, 263
AccII CGCG 3 cut(s) 25, 57, 228
AclI AACGTT 1 cut(s) 18
AclWI GGATC 4 cut(s) 544, 557, 1020, 1371
AcoI YGGCCR 1 cut(s) 229
AcuI CTGAAG 3 cut(s) 298, 1200, 1254
AcyI GRCGYC 2 cut(s) 12, 90
AfaI GTAC 2 cut(s) 338, 1636
AfiI CCNNNNNNNGG 5 cut(s) 61, 163, 247, 942, 1073
AgsI TTSAA 4 cut(s) 124, 424, 994, 1037
AjiI CACGTC 1 cut(s) 679
AjnI CCWGG 2 cut(s) 552, 1570
Alw21I GWGCWC 2 cut(s) 1136, 1418
Alw26I GTCTC 2 cut(s) 422, 1348
Alw44I GTGCAC 1 cut(s) 1414
AlwI GGATC 4 cut(s) 544, 557, 1020, 1371
Ama87I CYCGRG 2 cut(s) 35, 1608
AoxI GGCC 3 cut(s) 229, 264, 815
ApaLI GTGCAC 1 cut(s) 1414
ApeKI GCWGC 1 cut(s) 1391
AspLEI GCGC 4 cut(s) 275, 511, 760, 1320
AspS9I GGNCC 5 cut(s) 31, 223, 557, 815, 1157
AsuHPI GGTGA 8 cut(s) 172, 719, 739, 871, 965, 1007, 1571, 1684
AsuNHI GCTAGC 1 cut(s) 481
AvaI CYCGRG 2 cut(s) 35, 1608
AvaII GGWCC 4 cut(s) 31, 223, 557, 1157
BaeGI GKGCMC 2 cut(s) 1418, 1541
BamHI GGATCC 1 cut(s) 549
BanII GRGCYC 1 cut(s) 240
BbsI GAAGAC 1 cut(s) 134
Bbv12I GWGCWC 2 cut(s) 1136, 1418
BbvCI CCTCAGC 1 cut(s) 1091
BbvI GCAGC 1 cut(s) 1403
BccI CCATC 8 cut(s) 218, 638, 704, 869, 1089, 1408, 1588, 1615
BceAI ACGGC 2 cut(s) 260, 1152
BcgI CGANNNNNNTGC 2 cut(s) 1044, 1078
BciT130I CCWGG 2 cut(s) 554, 1572
BclI TGATCA 2 cut(s) 622, 1426
BcoDI GTCTC 2 cut(s) 422, 1348
BfaI CTAG 7 cut(s) 482, 498, 885, 999, 1227, 1488, 1700
BfmI CTRYAG 2 cut(s) 981, 1287
BfuAI ACCTGC 1 cut(s) 1111
BglII AGATCT 1 cut(s) 1337
BisI GCNGC 6 cut(s) 98, 229, 264, 525, 902, 1392
BlpI GCTNAGC 1 cut(s) 75
BlsI GCNGC 6 cut(s) 99, 230, 265, 526, 903, 1393
BmcAI AGTACT 1 cut(s) 1636
Bme1390I CCNGG 2 cut(s) 554, 1572
Bme18I GGWCC 4 cut(s) 31, 223, 557, 1157
BmeT110I CYCGRG 2 cut(s) 35, 1608
BmgBI CACGTC 1 cut(s) 679
BmgT120I GGNCC 5 cut(s) 31, 223, 557, 815, 1157
BmiI GGNNCC 6 cut(s) 32, 239, 551, 558, 715, 900
BmrFI CCNGG 2 cut(s) 554, 1572
BmsI GCATC 6 cut(s) 496, 922, 974, 1165, 1208, 1495
BmtI GCTAGC 1 cut(s) 485
BpiI GAAGAC 1 cut(s) 134
Bpu10I CCTNAGC 2 cut(s) 912, 1091
Bpu1102I GCTNAGC 1 cut(s) 75
BpuEI CTTGAG 1 cut(s) 1244
BsaBI GATNNNNATC 1 cut(s) 1566
BsaHI GRCGYC 2 cut(s) 12, 90
BsaI GGTCTC 1 cut(s) 1348
BsaJI CCNNGG 7 cut(s) 85, 201, 226, 232, 276, 553, 1127
BsaXI ACNNNNNCTCC 2 cut(s) 759, 789
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 163, 247, 942, 1073
Bse1I ACTGG 4 cut(s) 119, 1160, 1266, 1461
Bse8I GATNNNNATC 1 cut(s) 1566
BseBI CCWGG 2 cut(s) 554, 1572
BseDI CCNNGG 7 cut(s) 85, 201, 226, 232, 276, 553, 1127
BseGI GGATG 1 cut(s) 442
BseJI GATNNNNATC 1 cut(s) 1566
BseLI CCNNNNNNNGG 5 cut(s) 61, 163, 247, 942, 1073
BseMII CTCAG 6 cut(s) 384, 408, 1105, 1233, 1332, 1410
BseNI ACTGG 4 cut(s) 119, 1160, 1266, 1461
BseRI GAGGAG 5 cut(s) 125, 128, 182, 401, 780
BseSI GKGCMC 2 cut(s) 1418, 1541
BseXI GCAGC 1 cut(s) 1403
BseYI CCCAGC 1 cut(s) 449
BsgI GTGCAG 1 cut(s) 1410
Bsh1236I CGCG 3 cut(s) 25, 57, 228
Bsh1285I CGRYCG 1 cut(s) 355
BshFI GGCC 3 cut(s) 231, 266, 817
BsiEI CGRYCG 1 cut(s) 355
BsiHKAI GWGCWC 2 cut(s) 1136, 1418
BsiHKCI CYCGRG 2 cut(s) 35, 1608
BslFI GGGAC 1 cut(s) 139
BslI CCNNNNNNNGG 5 cut(s) 61, 163, 247, 942, 1073
BsmAI GTCTC 2 cut(s) 422, 1348
BsmFI GGGAC 1 cut(s) 139
BsmI GAATGC 1 cut(s) 1719
BsnI GGCC 3 cut(s) 231, 266, 817
Bso31I GGTCTC 1 cut(s) 1348
BsoBI CYCGRG 2 cut(s) 35, 1608
Bsp1286I GDGCHC 4 cut(s) 240, 1136, 1418, 1541
Bsp143I GATC 8 cut(s) 243, 352, 549, 622, 1012, 1337, 1363, 1426
Bsp1720I GCTNAGC 1 cut(s) 75
BspANI GGCC 3 cut(s) 231, 266, 817
BspCNI CTCAG 6 cut(s) 385, 409, 1104, 1232, 1333, 1411
BspFNI CGCG 3 cut(s) 25, 57, 228
BspLI GGNNCC 6 cut(s) 32, 239, 551, 558, 715, 900
BspMI ACCTGC 1 cut(s) 1111
BspOI GCTAGC 1 cut(s) 485
BspPI GGATC 4 cut(s) 544, 557, 1020, 1371
BspTNI GGTCTC 1 cut(s) 1348
BsrBI CCGCTC 2 cut(s) 100, 263
BsrI ACTGG 4 cut(s) 119, 1160, 1266, 1461
BssECI CCNNGG 7 cut(s) 85, 201, 226, 232, 276, 553, 1127
BssMI GATC 8 cut(s) 243, 352, 549, 622, 1012, 1337, 1363, 1426
BssNI GRCGYC 2 cut(s) 12, 90
BssT1I CCWWGG 3 cut(s) 201, 232, 1127
Bst2UI CCWGG 2 cut(s) 554, 1572
Bst4CI ACNGT 3 cut(s) 295, 641, 982
Bst6I CTCTTC 1 cut(s) 50
BstACI GRCGYC 2 cut(s) 12, 90
BstAPI GCANNNNNTGC 1 cut(s) 521
BstC8I GCNNGC 8 cut(s) 310, 404, 483, 487, 513, 1151, 1207, 1615
BstDSI CCRYGG 2 cut(s) 226, 276
BstF5I GGATG 1 cut(s) 442
BstFNI CGCG 3 cut(s) 25, 57, 228
BstHHI GCGC 4 cut(s) 275, 511, 760, 1320
BstKTI GATC 8 cut(s) 246, 355, 552, 625, 1015, 1340, 1366, 1429
BstMAI GTCTC 2 cut(s) 422, 1348
BstMBI GATC 8 cut(s) 243, 352, 549, 622, 1012, 1337, 1363, 1426
BstMCI CGRYCG 1 cut(s) 355
BstMWI GCNNNNNNNGC 6 cut(s) 272, 521, 665, 806, 917, 1283
BstNI CCWGG 2 cut(s) 554, 1572
BstSCI CCNGG 2 cut(s) 552, 1570
BstSFI CTRYAG 2 cut(s) 981, 1287
BstSLI GKGCMC 2 cut(s) 1418, 1541
BstUI CGCG 3 cut(s) 25, 57, 228
BstV1I GCAGC 1 cut(s) 1403
BstV2I GAAGAC 1 cut(s) 134
BstX2I RGATCY 2 cut(s) 549, 1337
BstXI CCANNNNNNTGG 2 cut(s) 1273, 1490
BstYI RGATCY 2 cut(s) 549, 1337
BsuRI GGCC 3 cut(s) 231, 266, 817
BtgI CCRYGG 2 cut(s) 226, 276
BtrI CACGTC 1 cut(s) 679
BtsCI GGATG 1 cut(s) 442
BtsI GCAGTG 1 cut(s) 639
BtsIMutI CAGTG 5 cut(s) 639, 646, 1227, 1273, 1416
BveI ACCTGC 1 cut(s) 1111
Cac8I GCNNGC 8 cut(s) 310, 404, 483, 487, 513, 1151, 1207, 1615
CfoI GCGC 4 cut(s) 275, 511, 760, 1320
Cfr13I GGNCC 5 cut(s) 31, 223, 557, 815, 1157
Cfr42I CCGCGG 1 cut(s) 229
CseI GACGC 4 cut(s) 58, 79, 774, 1155
Csp6I GTAC 2 cut(s) 337, 1635
CviAII CATG 4 cut(s) 340, 1154, 1367, 1448
CviQI GTAC 2 cut(s) 337, 1635
DpnI GATC 8 cut(s) 245, 354, 551, 624, 1014, 1339, 1365, 1428
DpnII GATC 8 cut(s) 243, 352, 549, 622, 1012, 1337, 1363, 1426
DrdI GACNNNNNNGTC 1 cut(s) 11
DseDI GACNNNNNNGTC 1 cut(s) 11
EaeI YGGCCR 1 cut(s) 229
Eam1104I CTCTTC 1 cut(s) 50
EarI CTCTTC 1 cut(s) 50
Eco130I CCWWGG 3 cut(s) 201, 232, 1127
Eco24I GRGCYC 1 cut(s) 240
Eco31I GGTCTC 1 cut(s) 1348
Eco32I GATATC 1 cut(s) 463
Eco47I GGWCC 4 cut(s) 31, 223, 557, 1157
Eco57I CTGAAG 3 cut(s) 298, 1200, 1254
Eco88I CYCGRG 2 cut(s) 35, 1608
EcoO109I RGGNCCY 2 cut(s) 31, 557
EcoRII CCWGG 2 cut(s) 552, 1570
EcoRV GATATC 1 cut(s) 463
EcoT14I CCWWGG 3 cut(s) 201, 232, 1127
EcoT38I GRGCYC 1 cut(s) 240
ErhI CCWWGG 3 cut(s) 201, 232, 1127
FaeI CATG 4 cut(s) 343, 1157, 1370, 1451
FaqI GGGAC 1 cut(s) 139
FatI CATG 4 cut(s) 339, 1153, 1366, 1447
FauI CCCGC 1 cut(s) 646
FbaI TGATCA 2 cut(s) 622, 1426
Fnu4HI GCNGC 6 cut(s) 98, 229, 264, 525, 902, 1392
FokI GGATG 1 cut(s) 449
FriOI GRGCYC 1 cut(s) 240
Fsp4HI GCNGC 6 cut(s) 98, 229, 264, 525, 902, 1392
FspBI CTAG 7 cut(s) 482, 498, 885, 999, 1227, 1488, 1700
FspI TGCGCA 1 cut(s) 1319
GlaI GCGC 4 cut(s) 274, 510, 759, 1319
GluI GCNGC 6 cut(s) 98, 229, 264, 525, 902, 1392
GsaI CCCAGC 1 cut(s) 453
HaeIII GGCC 3 cut(s) 231, 266, 817
HgaI GACGC 4 cut(s) 58, 79, 774, 1155
HhaI GCGC 4 cut(s) 275, 511, 760, 1320
Hin1I GRCGYC 2 cut(s) 12, 90
Hin1II CATG 4 cut(s) 343, 1157, 1370, 1451
Hin6I GCGC 4 cut(s) 273, 509, 758, 1318
HinP1I GCGC 4 cut(s) 273, 509, 758, 1318
HincII GTYRAC 2 cut(s) 16, 1525
HindII GTYRAC 2 cut(s) 16, 1525
HindIII AAGCTT 1 cut(s) 540
HinfI GANTC 8 cut(s) 81, 152, 197, 206, 251, 389, 833, 959
HphI GGTGA 8 cut(s) 172, 719, 739, 871, 965, 1007, 1571, 1684
Hpy166II GTNNAC 5 cut(s) 16, 637, 941, 1416, 1525
Hpy188III TCNNGA 4 cut(s) 103, 221, 241, 1608
Hpy8I GTNNAC 5 cut(s) 16, 637, 941, 1416, 1525
Hpy99I CGWCG 2 cut(s) 74, 286
HpyAV CCTTC 2 cut(s) 55, 418
HpyCH4III ACNGT 3 cut(s) 295, 641, 982
HpyCH4IV ACGT 4 cut(s) 12, 18, 678, 1627
HpyF10VI GCNNNNNNNGC 6 cut(s) 272, 521, 665, 806, 917, 1283
HpySE526I ACGT 4 cut(s) 12, 18, 678, 1627
Hsp92I GRCGYC 2 cut(s) 12, 90
Hsp92II CATG 4 cut(s) 343, 1157, 1370, 1451
HspAI GCGC 4 cut(s) 273, 509, 758, 1318
Ksp22I TGATCA 2 cut(s) 622, 1426
KspI CCGCGG 1 cut(s) 229
Kzo9I GATC 8 cut(s) 243, 352, 549, 622, 1012, 1337, 1363, 1426
LmnI GCTCC 5 cut(s) 243, 719, 767, 898, 1131
Lsp1109I GCAGC 1 cut(s) 1403
LweI GCATC 6 cut(s) 496, 922, 974, 1165, 1208, 1495
MaeI CTAG 7 cut(s) 482, 498, 885, 999, 1227, 1488, 1700
MaeII ACGT 4 cut(s) 12, 18, 678, 1627
MaeIII GTNAC 4 cut(s) 50, 178, 976, 1291
MalI GATC 8 cut(s) 245, 354, 551, 624, 1014, 1339, 1365, 1428
MbiI CCGCTC 2 cut(s) 100, 263
MboI GATC 8 cut(s) 243, 352, 549, 622, 1012, 1337, 1363, 1426
MboII GAAGA 5 cut(s) 37, 136, 139, 1193, 1265
MfeI CAATTG 1 cut(s) 1037
MflI RGATCY 2 cut(s) 549, 1337
MhlI GDGCHC 4 cut(s) 240, 1136, 1418, 1541
MluCI AATT 9 cut(s) 719, 749, 778, 826, 839, 972, 994, 1037, 1329
MlyI GAGTC 7 cut(s) 90, 161, 215, 245, 398, 842, 968
MmeI TCCRAC 1 cut(s) 1305
MseI TTAA 4 cut(s) 588, 608, 1164, 1434
MslI CAYNNNNRTG 2 cut(s) 1470, 1647
MspA1I CMGCKG 2 cut(s) 228, 1728
MspR9I CCNGG 2 cut(s) 554, 1572
MunI CAATTG 1 cut(s) 1037
Mva1269I GAATGC 1 cut(s) 1719
MvaI CCWGG 2 cut(s) 554, 1572
MvnI CGCG 3 cut(s) 25, 57, 228
MwoI GCNNNNNNNGC 6 cut(s) 272, 521, 665, 806, 917, 1283
NdeII GATC 8 cut(s) 243, 352, 549, 622, 1012, 1337, 1363, 1426
NheI GCTAGC 1 cut(s) 481
NlaIII CATG 4 cut(s) 343, 1157, 1370, 1451
NlaIV GGNNCC 6 cut(s) 32, 239, 551, 558, 715, 900
NmeAIII GCCGAG 2 cut(s) 66, 351
NmuCI GTSAC 4 cut(s) 50, 178, 976, 1291
NsbI TGCGCA 1 cut(s) 1319
PaeR7I CTCGAG 1 cut(s) 35
PctI GAATGC 1 cut(s) 1719
PfeI GAWTC 1 cut(s) 197
PflMI CCANNNNNTGG 2 cut(s) 163, 1073
PfoI TCCNGGA 1 cut(s) 1570
PkrI GCNGC 6 cut(s) 99, 230, 265, 526, 903, 1393
Ple19I CGATCG 1 cut(s) 355
PleI GAGTC 7 cut(s) 89, 160, 214, 245, 397, 841, 967
PpsI GAGTC 7 cut(s) 89, 160, 214, 245, 397, 841, 967
PpuMI RGGWCCY 2 cut(s) 31, 557
Psp1406I AACGTT 1 cut(s) 18
Psp5II RGGWCCY 2 cut(s) 31, 557
Psp6I CCWGG 2 cut(s) 552, 1570
PspFI CCCAGC 1 cut(s) 449
PspGI CCWGG 2 cut(s) 552, 1570
PspN4I GGNNCC 6 cut(s) 32, 239, 551, 558, 715, 900
PspPI GGNCC 5 cut(s) 31, 223, 557, 815, 1157
PspPPI RGGWCCY 2 cut(s) 31, 557
PspXI VCTCGAGB 1 cut(s) 35
PsuI RGATCY 2 cut(s) 549, 1337
PvuI CGATCG 1 cut(s) 355
RsaI GTAC 2 cut(s) 338, 1636
RsaNI GTAC 2 cut(s) 337, 1635
RseI CAYNNNNRTG 2 cut(s) 1470, 1647
SacII CCGCGG 1 cut(s) 229
SaqAI TTAA 4 cut(s) 588, 608, 1164, 1434
SatI GCNGC 6 cut(s) 98, 229, 264, 525, 902, 1392
Sau3AI GATC 8 cut(s) 243, 352, 549, 622, 1012, 1337, 1363, 1426
Sau96I GGNCC 5 cut(s) 31, 223, 557, 815, 1157
ScaI AGTACT 1 cut(s) 1636
SchI GAGTC 7 cut(s) 90, 161, 215, 245, 398, 842, 968
ScrFI CCNGG 2 cut(s) 554, 1572
SduI GDGCHC 4 cut(s) 240, 1136, 1418, 1541
SfaNI GCATC 6 cut(s) 496, 922, 974, 1165, 1208, 1495
SfcI CTRYAG 2 cut(s) 981, 1287
Sfr274I CTCGAG 1 cut(s) 35
Sfr303I CCGCGG 1 cut(s) 229
SgrBI CCGCGG 1 cut(s) 229
SinI GGWCC 4 cut(s) 31, 223, 557, 1157
SlaI CTCGAG 1 cut(s) 35
SmiMI CAYNNNNRTG 2 cut(s) 1470, 1647
SmlI CTYRAG 2 cut(s) 35, 1259
SmoI CTYRAG 2 cut(s) 35, 1259
Sse9I AATT 9 cut(s) 719, 749, 778, 826, 839, 972, 994, 1037, 1329
SspMI CTAG 7 cut(s) 482, 498, 885, 999, 1227, 1488, 1700
StyD4I CCNGG 2 cut(s) 552, 1570
StyI CCWWGG 3 cut(s) 201, 232, 1127
TaaI ACNGT 3 cut(s) 295, 641, 982
TaiI ACGT 4 cut(s) 15, 21, 681, 1630
TaqI TCGA 6 cut(s) 36, 104, 150, 195, 213, 351
TasI AATT 9 cut(s) 719, 749, 778, 826, 839, 972, 994, 1037, 1329
TatI WGTACW 2 cut(s) 336, 1634
TauI GCSGC 5 cut(s) 100, 231, 266, 527, 904
TfiI GAWTC 1 cut(s) 197
Tru1I TTAA 4 cut(s) 588, 608, 1164, 1434
Tru9I TTAA 4 cut(s) 588, 608, 1164, 1434
TscAI CASTG 5 cut(s) 639, 646, 1227, 1273, 1423
TseFI GTSAC 4 cut(s) 50, 178, 976, 1291
TseI GCWGC 1 cut(s) 1391
Tsp45I GTSAC 4 cut(s) 50, 178, 976, 1291
TspDTI ATGAA 1 cut(s) 1040
TspGWI ACGGA 6 cut(s) 38, 263, 299, 552, 958, 1556
TspRI CASTG 5 cut(s) 639, 646, 1227, 1273, 1423
Van91I CCANNNNNTGG 2 cut(s) 163, 1073
VneI GTGCAC 1 cut(s) 1414
VpaK11BI GGWCC 4 cut(s) 31, 223, 557, 1157
XcmI CCANNNNNNNNNTGG 2 cut(s) 217, 1025
XhoI CTCGAG 1 cut(s) 35
XspI CTAG 7 cut(s) 482, 498, 885, 999, 1227, 1488, 1700
ZraI GACGTC 1 cut(s) 13
ZrmI AGTACT 1 cut(s) 1636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.