Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0001570

Physical Location & Seq

Genomic Coordinates Forward (+)

7694682 .. 7699175

Gene Structure 4494 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG094000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGGCAGCGCCGGAGGCTCATGGAAATTGGCGGATCACCCGAAGCTGCCGAAGGGGAAGGTCATTGCTCTGATCGTGTTGGACGGTTGGGGCGAGGCCAAGCCCGATCAGTATAACTGTATCCACGTGGCGGAGACTCCCACCATGGATTCGCTTAAGAATGGTGTGCCGGACAAGTGGAGATTAGTGAGAGCTCATGGAACTGCTGTGGGGCTTCCTACAGAGGATGATATGGGCAACAGTGAGGTCGGTCACAACGCTCTTGGTGCTGGCCGTATTTTTGCACAGGGTGCAAAGCTTGTGGATTCAGCTCTTGAATCGGGAAAGATTTATCAAGGAGAAGGCTTCAAGTACATCAAGGAAGTGTTTGAGACCGGAACTTTGCATCTCATTGGGCTGTTGAGTGATGGCGGAGTCCATTCTCGGCTCGATCAAGTTCAGTTGTTGCTTAAAGGAGCTGCTGAGCATGGTGCTAAGAGGATCCGTCTTCATGTTCTTACTGATGGCCGTGATGTTCTGGATGGCTCAAGTGTGAAATTTGCCGAAACACTTGAAGAGGACCTTGCAAAGTTACGTGAGAAGGGTGTAGATGCACAGATTGCATCTGGTGGAGGTCGCATGTACGTCACCATGGATCGTTATGAGAATGACTGGTCAGTTGTAAAACGAGGATGGGATGCCCAAGTTCTTGGTGAAGCCCCCTATAAATTTAAGAATGCTGTTGAAGCAATCAAGACATTGAGAGCAGAACCAAAGGCCAATGACCAGTATCTACCTCCTTTCGTTATTGTTGATGACAGTGGAAAGCCTGTGGGCCCAATAGTTGATGGTGATGCTGTTGTAACATTCAACTTCCGAGCAGATCGTATGGTCATGGCTGCTAAGGCATTTGAGTATGCAGATTTTGATAAATTTGATAGAGTTCGAGTTCCTAAAATTCGTTATGCTGGTATGCTTCAGTACGATGGTGAGCTGAAGCTTCCAACCCGTTACCTTGTTGATCCCCCAGAGATTGATAGAACATCCGGGGAATATCTAACTTACAACGGTGTCCGTACTTTTGCCTGCAGTGAGACTGTAAAATTTGGCCATGTTACTTTCTTCTGGAATGGGAATCGCTCTGGATGCTTTAACCCTGAAATGGAGGAATATGTGGAAATTCCAAGTGATAGTGGAATCTCATTCAACGTCCAGCCAAAGATGAAGGCATTGGAGATTGCTGAAAAGGCAAGGGATGCTATTCTGAGCAAGAAGTTTGAACAGGTACGTGTAAACCTACCCAATGGGGACATGGTGGGGCATACTGGTGACATTGAGGCCACAGTTGTTGCTTGCAAGGCTGCTGATGAAGCTGTCAAGATGATTCTTGATGCGGTAGATCAAGTGGGTGGAATTTATGTTGTTACAGCCGATCATGGTAACGCCGAGGATATGGTGAAGAGAAATAAGACTGGGCAACCTGCTCTTGACAAGAGTGGCAACATCCAAATCCTTACCTCCCACACTCTTGAACCAGTTCCAATTGCTATTGGAGGCCCCGGACTGACACCTGGTGTTCGGTTCCGCAAGGATCTTCCGAGAGGTGGTCTTGCCAATGTTGCTGCAACTATGATCAATCTGCATGGATTTGAGGCCCCTGCTGACTATGAGCCGTCCCTCATTGAAGTTGTTGATAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004619 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0007275 GO:0008150 GO:0009266 GO:0009409 GO:0009506 GO:0009507 GO:0009536 GO:0009555 GO:0009628 GO:0009987 GO:0010035 GO:0010038 GO:0010118 GO:0016020 GO:0016853 GO:0016866 GO:0016868 GO:0030054 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046537 GO:0046686 GO:0048046 GO:0048229 GO:0048856 GO:0050896 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00010 ko00260 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00010 map00260 map00680 map01100 map01110 map01120 map01130 map01200 map01230

Pfam Domains

Protein Families

Metalloenzyme iPGM_N

Protein Analysis

559

Amino Acids

60.88

Weight (kDa)

5.51

Isoelectric Point (pI)

24.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Metalloenzyme	PF01676	21 - 544	1.3e-88	Metalloenzyme superfamily
iPGM_N	PF06415	101 - 322	2.3e-57	BPG-independent PGAM N-terminus (iPGM_N)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09780 AT3G08590 AT3G08590
fragaria_vesca	FvH4_6g09180 FvH4_6g09180 FvH4_6g09180
malus_domestica	MD04G1180100.v1.1 MD12G1195300.v1.1
prunus_persica	Prupe.6G300000_v2.0.a1 Prupe.6G300000_v2.0.a1 Prupe.6G300000_v2.0.a1
pyrus_communis	pycom04g15930 pycom12g18160
rosa_chinensis	RchiOBHm_Chr2g0154971 RchiOBHm_Chr2g0154981 RchiOBHm_Chr3g0459381 RchiOBHm_Chr3g0467071 RchiOBHm_Chr5g0071081 RchiOBHm_Chr6g0301401
rosa_laevigata	RLG00000020806 RLG00000025085 RLG00000033543
rosa_multiflora	Rmu_sc0000240.1_g000005 Rmu_sc0001304.1_g000020 Rmu_sc0004018.1_g000005 Rmu_sc0007705.1_g000010 Rmu_sc0014417.1_g000008 Rmu_ssc0000065.1_g000007
rosa_roxburghii	Rroxscaffold_2G00122270 Rroxscaffold_3G00253790 Rroxscaffold_6G00420200
rosa_rugosa	Rorug03G0036100 Rorug03G0036200 Rorug03G0036200 Rorug05G0003600 Rorug05G0003600 Rorug05G0003700
rosa_samantha	Rh3AG094000 Rh3AG133200 Rh3BG154300 Rh3CG098200 Rh3CG308400 Rh3DG097700 Rh4CG280400 Rh5BG093900 Rh5BG235100 Rh6AG418000 Rh6CG431600
rosa_wichuraiana	Rw3G008090 Rw6G036180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1468
AciI	CCGC	5 cut(s)	32, 131, 411, 1373, 1564
AclWI	GGATC	6 cut(s)	42, 475, 488, 642, 995, 1578
AcoI	YGGCCR	3 cut(s)	271, 505, 1087
AcsI	RAATTY	7 cut(s)	536, 707, 911, 936, 1082, 1158, 1392
AcuI	CTGAAG	2 cut(s)	941, 995
AcvI	CACGTG	1 cut(s)	127
AdeI	CACNNNGTG	2 cut(s)	290, 1553
AfaI	GTAC	5 cut(s)	353, 623, 962, 1057, 1266
AfiI	CCNNNNNNNGG	3 cut(s)	130, 1141, 1583
AflII	CTTAAG	1 cut(s)	155
AflIII	ACRYGT	1 cut(s)	1267
AgsI	TTSAA	9 cut(s)	317, 349, 554, 725, 850, 1186, 1259, 1511, 1664
AjnI	CCWGG	1 cut(s)	1549
AluBI	AGCT	8 cut(s)	46, 194, 298, 311, 458, 973, 979, 1352
AluI	AGCT	8 cut(s)	46, 194, 298, 311, 458, 973, 979, 1352
Alw21I	GWGCWC	1 cut(s)	196
Alw26I	GTCTC	3 cut(s)	128, 365, 1067
AlwI	GGATC	6 cut(s)	42, 475, 488, 642, 995, 1578
AoxI	GGCC	9 cut(s)	96, 271, 505, 756, 814, 1087, 1317, 1534, 1632
ApaI	GGGCCC	1 cut(s)	818
ApeKI	GCWGC	6 cut(s)	6, 46, 458, 878, 1340, 1601
ApoI	RAATTY	7 cut(s)	536, 707, 911, 936, 1082, 1158, 1392
ArsI	GACNNNNNNTTYG	2 cut(s)	364, 396
Asp700I	GAANNNNTTC	1 cut(s)	1515
AspLEI	GCGC	1 cut(s)	11
AspS9I	GGNCC	5 cut(s)	559, 814, 815, 1535, 1633
AsuC2I	CCSGG	2 cut(s)	1027, 1539
AsuHPI	GGTGA	7 cut(s)	29, 619, 704, 842, 980, 1319, 1447
AvaII	GGWCC	1 cut(s)	559
BaeGI	GKGCMC	1 cut(s)	818
BalI	TGGCCA	1 cut(s)	1089
BamHI	GGATCC	1 cut(s)	480
BanII	GRGCYC	2 cut(s)	196, 818
BbrPI	CACGTG	1 cut(s)	127
BbsI	GAAGAC	1 cut(s)	479
Bbv12I	GWGCWC	1 cut(s)	196
BbvI	GCAGC	6 cut(s)	18, 33, 445, 865, 1327, 1588
BccI	CCATC	6 cut(s)	401, 497, 515, 666, 821, 959
BceAI	ACGGC	3 cut(s)	258, 492, 1636
BciT130I	CCWGG	1 cut(s)	1551
BciVI	GTATCC	1 cut(s)	131
BclI	TGATCA	1 cut(s)	1611
BcnI	CCSGG	2 cut(s)	1027, 1539
BcoDI	GTCTC	3 cut(s)	128, 365, 1067
BfaI	CTAG	1 cut(s)	1678
BfmI	CTRYAG	2 cut(s)	219, 1066
BfoI	RGCGCY	1 cut(s)	12
BfrI	CTTAAG	1 cut(s)	155
BfuAI	ACCTGC	1 cut(s)	1468
BfuI	GTATCC	1 cut(s)	131
BisI	GCNGC	6 cut(s)	7, 47, 459, 879, 1341, 1602
BlpI	GCTNAGC	1 cut(s)	462
BlsI	GCNGC	6 cut(s)	8, 48, 460, 880, 1342, 1603
Bme1390I	CCNGG	3 cut(s)	1027, 1539, 1551
Bme18I	GGWCC	1 cut(s)	559
BmgT120I	GGNCC	5 cut(s)	559, 814, 815, 1535, 1633
BmiI	GGNNCC	5 cut(s)	482, 816, 1537, 1562, 1635
BmrFI	CCNGG	3 cut(s)	1027, 1539, 1551
BmrI	ACTGGG	1 cut(s)	1461
BmsI	GCATC	8 cut(s)	394, 580, 611, 667, 823, 1115, 1225, 1360
BmuI	ACTGGG	1 cut(s)	1461
BpiI	GAAGAC	1 cut(s)	479
Bpu10I	CCTNAGC	1 cut(s)	882
Bpu1102I	GCTNAGC	1 cut(s)	462
BpuEI	CTTGAG	1 cut(s)	511
BpuMI	CCSGG	2 cut(s)	1027, 1539
BsaAI	YACGTR	3 cut(s)	127, 575, 1268
BsaI	GGTCTC	1 cut(s)	365
BsaJI	CCNNGG	5 cut(s)	144, 630, 1026, 1425, 1537
BsaWI	WCCGGW	1 cut(s)	374
Bsc4I	CCNNNNNNNGG	3 cut(s)	130, 1141, 1583
Bse1I	ACTGG	5 cut(s)	656, 766, 1309, 1456, 1514
Bse3DI	GCAATG	1 cut(s)	63
BseBI	CCWGG	1 cut(s)	1551
BseDI	CCNNGG	5 cut(s)	144, 630, 1026, 1425, 1537
BseGI	GGATG	8 cut(s)	232, 526, 677, 682, 1022, 1130, 1240, 1482
BseLI	CCNNNNNNNGG	3 cut(s)	130, 1141, 1583
BseMI	GCAATG	1 cut(s)	63
BseMII	CTCAG	2 cut(s)	453, 1235
BseNI	ACTGG	5 cut(s)	656, 766, 1309, 1456, 1514
BseSI	GKGCMC	1 cut(s)	818
BseXI	GCAGC	6 cut(s)	18, 33, 445, 865, 1327, 1588
BshFI	GGCC	9 cut(s)	98, 273, 507, 758, 816, 1089, 1319, 1536, 1634
BsiHKAI	GWGCWC	1 cut(s)	196
BsiSI	CCGG	5 cut(s)	12, 170, 375, 1026, 1539
BslFI	GGGAC	2 cut(s)	1301, 1639
BslI	CCNNNNNNNGG	3 cut(s)	130, 1141, 1583
BsmAI	GTCTC	3 cut(s)	128, 365, 1067
BsmFI	GGGAC	2 cut(s)	1301, 1639
BsmI	GAATGC	1 cut(s)	721
BsnI	GGCC	9 cut(s)	98, 273, 507, 758, 816, 1089, 1319, 1536, 1634
Bso31I	GGTCTC	1 cut(s)	365
Bsp120I	GGGCCC	1 cut(s)	814
Bsp1286I	GDGCHC	2 cut(s)	196, 818
Bsp1720I	GCTNAGC	1 cut(s)	462
Bsp19I	CCATGG	2 cut(s)	144, 630
BspACI	CCGC	5 cut(s)	32, 131, 411, 1373, 1564
BspANI	GGCC	9 cut(s)	98, 273, 507, 758, 816, 1089, 1319, 1536, 1634
BspCNI	CTCAG	2 cut(s)	454, 1236
BspLI	GGNNCC	5 cut(s)	482, 816, 1537, 1562, 1635
BspMAI	CTGCAG	1 cut(s)	1070
BspMI	ACCTGC	1 cut(s)	1468
BspPI	GGATC	6 cut(s)	42, 475, 488, 642, 995, 1578
BspTI	CTTAAG	1 cut(s)	155
BspTNI	GGTCTC	1 cut(s)	365
BsrDI	GCAATG	1 cut(s)	63
BsrI	ACTGG	5 cut(s)	656, 766, 1309, 1456, 1514
BssECI	CCNNGG	5 cut(s)	144, 630, 1026, 1425, 1537
BssT1I	CCWWGG	2 cut(s)	144, 630
Bst2UI	CCWGG	1 cut(s)	1551
Bst4CI	ACNGT	7 cut(s)	86, 119, 242, 800, 1049, 1078, 1324
Bst6I	CTCTTC	2 cut(s)	549, 1433
BstAFI	CTTAAG	1 cut(s)	155
BstAPI	GCANNNNNTGC	3 cut(s)	290, 599, 1235
BstBAI	YACGTR	3 cut(s)	127, 575, 1268
BstC8I	GCNNGC	3 cut(s)	271, 1066, 1333
BstDEI	CTNAG	4 cut(s)	462, 474, 882, 1244
BstDSI	CCRYGG	2 cut(s)	144, 630
BstF5I	GGATG	8 cut(s)	232, 526, 677, 682, 1022, 1130, 1240, 1482
BstH2I	RGCGCY	1 cut(s)	12
BstHHI	GCGC	1 cut(s)	11
BstMAI	GTCTC	3 cut(s)	128, 365, 1067
BstNI	CCWGG	1 cut(s)	1551
BstNSI	RCATGY	1 cut(s)	622
BstSCI	CCNGG	3 cut(s)	1025, 1537, 1549
BstSFI	CTRYAG	2 cut(s)	219, 1066
BstSLI	GKGCMC	1 cut(s)	818
BstV1I	GCAGC	6 cut(s)	18, 33, 445, 865, 1327, 1588
BstV2I	GAAGAC	1 cut(s)	479
BstX2I	RGATCY	2 cut(s)	480, 1570
BstXI	CCANNNNNNTGG	1 cut(s)	689
BstYI	RGATCY	2 cut(s)	480, 1570
BsuI	GTATCC	1 cut(s)	131
BsuRI	GGCC	9 cut(s)	98, 273, 507, 758, 816, 1089, 1319, 1536, 1634
BtgI	CCRYGG	2 cut(s)	144, 630
BtsCI	GGATG	8 cut(s)	232, 526, 677, 682, 1022, 1130, 1240, 1482
BtsI	GCAGTG	1 cut(s)	1075
BtsIMutI	CAGTG	3 cut(s)	247, 805, 1075
BveI	ACCTGC	1 cut(s)	1468
Cac8I	GCNNGC	3 cut(s)	271, 1066, 1333
CfoI	GCGC	1 cut(s)	11
Cfr13I	GGNCC	5 cut(s)	559, 814, 815, 1535, 1633
CsiI	ACCWGGT	1 cut(s)	1549
Csp6I	GTAC	5 cut(s)	352, 622, 961, 1056, 1265
CspCI	CAANNNNNGTGG	4 cut(s)	282, 317, 1309, 1344
CviQI	GTAC	5 cut(s)	352, 622, 961, 1056, 1265
DdeI	CTNAG	4 cut(s)	462, 474, 882, 1244
DraIII	CACNNNGTG	2 cut(s)	290, 1553
EaeI	YGGCCR	3 cut(s)	271, 505, 1087
Eam1104I	CTCTTC	2 cut(s)	549, 1433
EarI	CTCTTC	2 cut(s)	549, 1433
EciI	GGCGGA	3 cut(s)	47, 146, 426
Ecl136II	GAGCTC	1 cut(s)	194
Eco130I	CCWWGG	2 cut(s)	144, 630
Eco24I	GRGCYC	2 cut(s)	196, 818
Eco31I	GGTCTC	1 cut(s)	365
Eco47I	GGWCC	1 cut(s)	559
Eco53kI	GAGCTC	1 cut(s)	194
Eco57I	CTGAAG	2 cut(s)	941, 995
Eco72I	CACGTG	1 cut(s)	127
EcoICRI	GAGCTC	1 cut(s)	194
EcoO109I	RGGNCCY	3 cut(s)	559, 1535, 1633
EcoRII	CCWGG	1 cut(s)	1549
EcoT14I	CCWWGG	2 cut(s)	144, 630
EcoT38I	GRGCYC	2 cut(s)	196, 818
ErhI	CCWWGG	2 cut(s)	144, 630
FalI	AAGNNNNNCTT	2 cut(s)	546, 578
FaqI	GGGAC	2 cut(s)	1301, 1639
FbaI	TGATCA	1 cut(s)	1611
Fnu4HI	GCNGC	6 cut(s)	7, 47, 459, 879, 1341, 1602
FokI	GGATG	8 cut(s)	239, 533, 684, 689, 1009, 1137, 1247, 1469
FriOI	GRGCYC	2 cut(s)	196, 818
Fsp4HI	GCNGC	6 cut(s)	7, 47, 459, 879, 1341, 1602
FspBI	CTAG	1 cut(s)	1678
GlaI	GCGC	1 cut(s)	10
GluI	GCNGC	6 cut(s)	7, 47, 459, 879, 1341, 1602
HaeII	RGCGCY	1 cut(s)	12
HaeIII	GGCC	9 cut(s)	98, 273, 507, 758, 816, 1089, 1319, 1536, 1634
HapII	CCGG	5 cut(s)	12, 170, 375, 1026, 1539
HhaI	GCGC	1 cut(s)	11
Hin6I	GCGC	1 cut(s)	9
HinP1I	GCGC	1 cut(s)	9
HindIII	AAGCTT	2 cut(s)	296, 977
HinfI	GANTC	8 cut(s)	136, 149, 305, 317, 414, 1114, 1176, 1363
HpaII	CCGG	5 cut(s)	12, 170, 375, 1026, 1539
HphI	GGTGA	7 cut(s)	29, 619, 704, 842, 980, 1319, 1447
Hpy166II	GTNNAC	1 cut(s)	1273
Hpy188I	TCNGA	4 cut(s)	72, 857, 1245, 1578
Hpy8I	GTNNAC	1 cut(s)	1273
HpyAV	CCTTC	5 cut(s)	46, 52, 335, 574, 1198
HpyCH4III	ACNGT	7 cut(s)	86, 119, 242, 800, 1049, 1078, 1324
HpyCH4IV	ACGT	5 cut(s)	126, 574, 624, 1188, 1267
HpyF3I	CTNAG	4 cut(s)	462, 474, 882, 1244
HpySE526I	ACGT	5 cut(s)	126, 574, 624, 1188, 1267
HspAI	GCGC	1 cut(s)	9
Ksp22I	TGATCA	1 cut(s)	1611
LmnI	GCTCC	1 cut(s)	455
Lsp1109I	GCAGC	6 cut(s)	18, 33, 445, 865, 1327, 1588
LweI	GCATC	8 cut(s)	394, 580, 611, 667, 823, 1115, 1225, 1360
MabI	ACCWGGT	1 cut(s)	1549
MaeI	CTAG	1 cut(s)	1678
MaeII	ACGT	5 cut(s)	126, 574, 624, 1188, 1267
MaeIII	GTNAC	9 cut(s)	251, 570, 625, 841, 989, 1093, 1307, 1402, 1418
MboII	GAAGA	5 cut(s)	479, 566, 1093, 1450, 1565
MfeI	CAATTG	1 cut(s)	1521
MflI	RGATCY	2 cut(s)	480, 1570
MhlI	GDGCHC	2 cut(s)	196, 818
MlsI	TGGCCA	1 cut(s)	1089
MluCI	AATT	9 cut(s)	26, 536, 707, 911, 936, 1082, 1158, 1392, 1521
MluNI	TGGCCA	1 cut(s)	1089
MlyI	GAGTC	2 cut(s)	130, 423
MmeI	TCCRAC	2 cut(s)	60, 1007
Mox20I	TGGCCA	1 cut(s)	1089
MroXI	GAANNNNTTC	1 cut(s)	1515
MscI	TGGCCA	1 cut(s)	1089
MseI	TTAA	4 cut(s)	156, 450, 711, 1131
MslI	CAYNNNNRTG	1 cut(s)	1305
Msp20I	TGGCCA	1 cut(s)	1089
MspCI	CTTAAG	1 cut(s)	155
MspI	CCGG	5 cut(s)	12, 170, 375, 1026, 1539
MspR9I	CCNGG	3 cut(s)	1027, 1539, 1551
MunI	CAATTG	1 cut(s)	1521
Mva1269I	GAATGC	1 cut(s)	721
MvaI	CCWGG	1 cut(s)	1551
NciI	CCSGG	2 cut(s)	1027, 1539
NcoI	CCATGG	2 cut(s)	144, 630
NlaIV	GGNNCC	5 cut(s)	482, 816, 1537, 1562, 1635
NmeAIII	GCCGAG	2 cut(s)	403, 1450
NmuCI	GTSAC	3 cut(s)	251, 625, 1307
NspI	RCATGY	1 cut(s)	622
PcsI	WCGNNNNNNNCGW	1 cut(s)	90
PctI	GAATGC	1 cut(s)	721
PdmI	GAANNNNTTC	1 cut(s)	1515
PfeI	GAWTC	6 cut(s)	149, 305, 317, 1114, 1176, 1363
PkrI	GCNGC	6 cut(s)	8, 48, 460, 880, 1342, 1603
PleI	GAGTC	2 cut(s)	130, 422
PmaCI	CACGTG	1 cut(s)	127
PmlI	CACGTG	1 cut(s)	127
PpsI	GAGTC	2 cut(s)	130, 422
Ppu21I	YACGTR	3 cut(s)	127, 575, 1268
PpuMI	RGGWCCY	1 cut(s)	559
Psp124BI	GAGCTC	1 cut(s)	196
Psp5II	RGGWCCY	1 cut(s)	559
Psp6I	CCWGG	1 cut(s)	1549
PspCI	CACGTG	1 cut(s)	127
PspGI	CCWGG	1 cut(s)	1549
PspN4I	GGNNCC	5 cut(s)	482, 816, 1537, 1562, 1635
PspOMI	GGGCCC	1 cut(s)	814
PspPI	GGNCC	5 cut(s)	559, 814, 815, 1535, 1633
PspPPI	RGGWCCY	1 cut(s)	559
PstI	CTGCAG	1 cut(s)	1070
PsuI	RGATCY	2 cut(s)	480, 1570
RsaI	GTAC	5 cut(s)	353, 623, 962, 1057, 1266
RsaNI	GTAC	5 cut(s)	352, 622, 961, 1056, 1265
RseI	CAYNNNNRTG	1 cut(s)	1305
SacI	GAGCTC	1 cut(s)	196
SaqAI	TTAA	4 cut(s)	156, 450, 711, 1131
SatI	GCNGC	6 cut(s)	7, 47, 459, 879, 1341, 1602
Sau96I	GGNCC	5 cut(s)	559, 814, 815, 1535, 1633
SchI	GAGTC	2 cut(s)	130, 423
ScrFI	CCNGG	3 cut(s)	1027, 1539, 1551
SduI	GDGCHC	2 cut(s)	196, 818
SexAI	ACCWGGT	1 cut(s)	1549
SfaNI	GCATC	8 cut(s)	394, 580, 611, 667, 823, 1115, 1225, 1360
SfcI	CTRYAG	2 cut(s)	219, 1066
SinI	GGWCC	1 cut(s)	559
SmiMI	CAYNNNNRTG	1 cut(s)	1305
SmlI	CTYRAG	2 cut(s)	155, 526
SmoI	CTYRAG	2 cut(s)	155, 526
Sse9I	AATT	9 cut(s)	26, 536, 707, 911, 936, 1082, 1158, 1392, 1521
SsiI	CCGC	5 cut(s)	32, 131, 411, 1373, 1564
SspMI	CTAG	1 cut(s)	1678
SstI	GAGCTC	1 cut(s)	196
StyD4I	CCNGG	3 cut(s)	1025, 1537, 1549
StyI	CCWWGG	2 cut(s)	144, 630
TaaI	ACNGT	7 cut(s)	86, 119, 242, 800, 1049, 1078, 1324
TaiI	ACGT	5 cut(s)	129, 577, 627, 1191, 1270
TaqI	TCGA	2 cut(s)	429, 925
TaqII	GACCGA	1 cut(s)	239
TasI	AATT	9 cut(s)	26, 536, 707, 911, 936, 1082, 1158, 1392, 1521
TatI	WGTACW	1 cut(s)	351
TfiI	GAWTC	6 cut(s)	149, 305, 317, 1114, 1176, 1363
Tru1I	TTAA	4 cut(s)	156, 450, 711, 1131
Tru9I	TTAA	4 cut(s)	156, 450, 711, 1131
TscAI	CASTG	3 cut(s)	247, 805, 1075
TseFI	GTSAC	3 cut(s)	251, 625, 1307
TseI	GCWGC	6 cut(s)	6, 46, 458, 878, 1340, 1601
Tsp45I	GTSAC	3 cut(s)	251, 625, 1307
TspDTI	ATGAA	3 cut(s)	479, 1217, 1362
TspGWI	ACGGA	2 cut(s)	473, 1043
TspRI	CASTG	3 cut(s)	247, 805, 1075
Vha464I	CTTAAG	1 cut(s)	155
VpaK11BI	GGWCC	1 cut(s)	559
XapI	RAATTY	7 cut(s)	536, 707, 911, 936, 1082, 1158, 1392
XceI	RCATGY	1 cut(s)	622
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1288
XmnI	GAANNNNTTC	1 cut(s)	1515
XspI	CTAG	1 cut(s)	1678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.