RchiOBHm_Chr2g0154981

2,3-bisphosphoglycerate-independent phosphoglycerate

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
71983902 .. 71984560
659 bp
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UTR
Exon/CDS
Intron
PRQ52391

Sequence Viewer

Length: 522 bp
ATGATTCAGTATGATGGTGAGTTGAAGCTTCCAACCCGTTACCTTATAGAACCCCCAAAGATTGATAGAACATCCGGGGAATATCTGACTTACAACGGTGTCCATACTTTTGCCTGCGGGTCAGTTTTAAGTGCCGAGTTGGTTATTGTCACTACTTTATGGAGTTTCTGCAAAGCATTTGATAGTGGAATCTCATTCAACATCCAGCCAAAGATGAAGGCATTGGAGATTGCTGAAAAGGCAAGGGATGCTATTCTGACCAAGAAGTTTGAACAGATAATAAAAAATAGCCTTCTGATATGCAAGTACGTGTTAACCTACCCAATGGGGACATGGTGGGGCATACTGGTGACATTTGTTAGCTTTATAGAGAAACTTGAAGAAGAAGGAAAAGAGAGAAGAGGAAGGGAGAAAACAGAGCTATTTTTACCAAAAAATGAATATGTCGAATACAATTGTACCTATAGCTACAGTATTCTTTGTATTTATACCTATTTGGCTAATTACACTTTTAACCCTTAA

Protein Analysis

173

Amino Acids

20.09

Weight (kDa)

6.6

Isoelectric Point (pI)

37.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 117
AfaI GTAC 2 cut(s) 308, 460
AflIII ACRYGT 1 cut(s) 309
AgsI TTSAA 4 cut(s) 25, 199, 272, 380
AluBI AGCT 4 cut(s) 28, 363, 421, 468
AluI AGCT 4 cut(s) 28, 363, 421, 468
AsuC2I CCSGG 1 cut(s) 76
AsuHPI GGTGA 2 cut(s) 29, 361
BaeI ACNNNNGTAYC 2 cut(s) 442, 475
BccI CCATC 1 cut(s) 8
BcnI CCSGG 1 cut(s) 76
BfmI CTRYAG 2 cut(s) 463, 469
Bme1390I CCNGG 1 cut(s) 76
BmrFI CCNGG 1 cut(s) 76
BmsI GCATC 1 cut(s) 238
BpuMI CCSGG 1 cut(s) 76
BsaAI YACGTR 1 cut(s) 310
BsaJI CCNNGG 1 cut(s) 75
Bse1I ACTGG 1 cut(s) 351
BseDI CCNNGG 1 cut(s) 75
BseGI GGATG 3 cut(s) 71, 201, 253
BseNI ACTGG 1 cut(s) 351
BsiSI CCGG 1 cut(s) 75
BslFI GGGAC 1 cut(s) 343
BsmFI GGGAC 1 cut(s) 343
BspACI CCGC 1 cut(s) 117
BsrI ACTGG 1 cut(s) 351
BssECI CCNNGG 1 cut(s) 75
Bst4CI ACNGT 2 cut(s) 98, 473
Bst6I CTCTTC 1 cut(s) 394
BstAPI GCANNNNNTGC 1 cut(s) 248
BstBAI YACGTR 1 cut(s) 310
BstC8I GCNNGC 1 cut(s) 115
BstF5I GGATG 3 cut(s) 71, 201, 253
BstMWI GCNNNNNNNGC 2 cut(s) 239, 248
BstSCI CCNGG 1 cut(s) 74
BstSFI CTRYAG 2 cut(s) 463, 469
BtsCI GGATG 3 cut(s) 71, 201, 253
Cac8I GCNNGC 1 cut(s) 115
Csp6I GTAC 2 cut(s) 307, 459
CviAII CATG 1 cut(s) 333
CviJI RGCY 7 cut(s) 28, 208, 291, 363, 421, 468, 500
CviKI_1 RGCY 7 cut(s) 28, 208, 291, 363, 421, 468, 500
CviQI GTAC 2 cut(s) 307, 459
Eam1104I CTCTTC 1 cut(s) 394
EarI CTCTTC 1 cut(s) 394
FaeI CATG 1 cut(s) 336
FaqI GGGAC 1 cut(s) 343
FatI CATG 1 cut(s) 332
FauI CCCGC 1 cut(s) 110
FokI GGATG 3 cut(s) 58, 188, 260
HapII CCGG 1 cut(s) 75
Hin1II CATG 1 cut(s) 336
HincII GTYRAC 1 cut(s) 315
HindII GTYRAC 1 cut(s) 315
HindIII AAGCTT 1 cut(s) 26
HinfI GANTC 2 cut(s) 4, 189
HpaI GTTAAC 1 cut(s) 315
HpaII CCGG 1 cut(s) 75
HphI GGTGA 2 cut(s) 29, 361
Hpy166II GTNNAC 1 cut(s) 315
Hpy188I TCNGA 3 cut(s) 87, 258, 297
Hpy8I GTNNAC 1 cut(s) 315
HpyAV CCTTC 4 cut(s) 211, 302, 380, 399
HpyCH4III ACNGT 2 cut(s) 98, 473
HpyCH4IV ACGT 1 cut(s) 309
HpyCH4V TGCA 2 cut(s) 171, 303
HpyF10VI GCNNNNNNNGC 2 cut(s) 239, 248
HpySE526I ACGT 1 cut(s) 309
Hsp92II CATG 1 cut(s) 336
KspAI GTTAAC 1 cut(s) 315
LpnPI CCDG 4 cut(s) 88, 127, 218, 332
LweI GCATC 1 cut(s) 238
MaeII ACGT 1 cut(s) 309
MaeIII GTNAC 3 cut(s) 38, 148, 349
MboII GAAGA 3 cut(s) 392, 395, 411
MfeI CAATTG 1 cut(s) 454
MluCI AATT 2 cut(s) 454, 502
MmeI TCCRAC 1 cut(s) 56
MnlI CCTC 1 cut(s) 395
MseI TTAA 4 cut(s) 128, 314, 513, 520
MslI CAYNNNNRTG 1 cut(s) 347
MspI CCGG 1 cut(s) 75
MspR9I CCNGG 1 cut(s) 76
MunI CAATTG 1 cut(s) 454
MwoI GCNNNNNNNGC 2 cut(s) 239, 248
NciI CCSGG 1 cut(s) 76
NlaIII CATG 1 cut(s) 336
NmeAIII GCCGAG 1 cut(s) 160
NmuCI GTSAC 2 cut(s) 148, 349
PfeI GAWTC 2 cut(s) 4, 189
Ppu21I YACGTR 1 cut(s) 310
RsaI GTAC 2 cut(s) 308, 460
RsaNI GTAC 2 cut(s) 307, 459
RseI CAYNNNNRTG 1 cut(s) 347
SaqAI TTAA 4 cut(s) 128, 314, 513, 520
ScrFI CCNGG 1 cut(s) 76
SetI ASST 9 cut(s) 30, 45, 312, 320, 365, 423, 464, 470, 494
SfaNI GCATC 1 cut(s) 238
SfcI CTRYAG 2 cut(s) 463, 469
SmiMI CAYNNNNRTG 1 cut(s) 347
Sse9I AATT 2 cut(s) 454, 502
SsiI CCGC 1 cut(s) 117
StyD4I CCNGG 1 cut(s) 74
TaaI ACNGT 2 cut(s) 98, 473
TaiI ACGT 1 cut(s) 312
TaqI TCGA 1 cut(s) 447
TasI AATT 2 cut(s) 454, 502
TfiI GAWTC 2 cut(s) 4, 189
Tru1I TTAA 4 cut(s) 128, 314, 513, 520
Tru9I TTAA 4 cut(s) 128, 314, 513, 520
TseFI GTSAC 2 cut(s) 148, 349
Tsp45I GTSAC 2 cut(s) 148, 349
TspDTI ATGAA 2 cut(s) 230, 453
XcmI CCANNNNNNNNNTGG 1 cut(s) 330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.