Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0001708

Physical Location & Seq

Genomic Coordinates Reverse (-)

21532805 .. 21537377

Gene Structure 4573 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2388 bp

ATGTCTTTCTCTCACCTCAGCACTCTCAAACTCTCCACCTTTCCCTCACCAGAAAAAAAATCTGGACATTACTTCGTGCCACAAGCAGCTTCAACAATGCCGAGATTAAATGGGGCAGCGGAGGTCAGTGCTGCTGTTGTGAGTTTTGAGGGTACTAAAGAAAGAATAAAGAAGATGTTCGACAAGGTTGATCTCTCGGTTTCCTCGTATGACACTGCTTGGGTGGCAATGGTCCCTTGTCCTAATTCCCCAAAGGACCCTTTCTTCCCTGAATGCTTAAACTGGTTATTGTGTAATCAACTCCATGATGGCTCATGGGGTCCTCCTAATTTGCAACCCTTGTTCACGAAAGATGCTCTCTTATCTACCTTAGCATGCATCCTTGCACTAAAGCAGTGGAATGTTGGCGAAGAACAAATTAACAAGGGGCTACTTTTTATTGAATCAAATGTAGCTTCAGCTACTGATGAAGAACAACAATCTCCTGTTGGATTTAATATATTGTTTCCTGCGATGATTGAGTCTGCACTGAATTTGAAGATGAACCTTCCCTTGGGTGCACCAACCCTAGACGCCTTATTTCACAGAAGAGACTTTGAGCTGAAAAGAGGCTATGCAAGCAACTCAGAGGGGTGGAGAACGTTCTTAGCATATATTTCAGAAGGATTTGGAAAGTCGCAGGATTGGGACCTGGTCATGAAGTATCAAAGGAAGAATGGGTCCTTGTTTAATTCACCATCAACCACCGCCTCTGCTTTTACTCACCTTAAGAATGCTGATTGCCTTAAGTACCTACGCTCACTCCTAGAGAAGTTTGGGAATGCAGTTCCAACAGTCTATCCTCTAGATAAATATGCCCGTCTTTCTATGGCTGCCAGTCTTGAAAATTTGGGTATTGATCGACATTTCAGGGAGGAAATTAGAAGTGTACTGGATGAAACATACAGAGGCTGGCTGCAGGGTGATGAAGATATATTATCAGATGCTGCCACCTGCGCAATGGCGTTTCGACTCTTACGTGTTAATGGATATGATGTTTCTGCAGATCCCTTAACTCAATATTCAGAAGATCGTTTGTTTAATTCCCTTGGAGGGTATATGAAGGACATCGATGATGCCTTAGAGTTGTTTAGAGCTTCAGAAACCATCATACATCCAGATGAATCAGTTCTAGAGGAACAACATCACTGGACGAGTCATTTTCTGAAGCAGGAGTTATCCGATACTTTAATTCGGGGTCATAAACTGAATAAGCATATCGGCCTAGAGGTGGATGATGCTCTTAAACTTCCTCGCTATGCAATTCTGGGCCGGTTGTCAACCAGGACAGCTATAAAATATTACAACACAGATAGTACAAGGATTTTAAAATCTTATTATCGTTGTTTGAATATTGGAAATGAAGATTTCCTAAAGCTGGCTGTGGATGACTTCAATAATTGCCAATCTATACACCGTGAAGAACTCAACCATCTTACTAGGTGGGTTGAGGAGTACAGATTAGACAAGCTAAACTTTGCTAGACAGAAGCAGGCATACTGTTACTTCTCTGCTGCTGCAACCCTTTTTCCTCCTGAACTATCAGATGCACGCATATCATGGGCCAAAAATGGAGTCCTTACGACTGTGGTCGATGATTTCTTTGACGTTGGAGGTTCCGAAGAGGAACTGATAAACCTCATACAATTGGTTGAGAAGTGGGATGTGAATGTGAGTGTTGATTGTTGTTCCGAGAATGTTGAAATTATATTTTCAGCACTGAAGAACACAATCAATGATATTGGAGCCAGGGCATTCATGCGGCAAGGACGCAGTGTGACAAGTCATGTGATAGAGATTTGGTTGGATTTGATCAAGTCTATGTTCAAGGAAGCCGAATGGTTGAGAAATAAGTCAGTTCCAACAATGGAGGAGTATATGGAAAATGCATATGTATCATTTGCCTTGGGACCGATTGTCCTTCCAGCTCTCTATTTGGTTGGGCCTAAGCTTTCAGAGGAGGCTGTAGGAAGTTCCGAATTTGATCATCTGTATCGACTCATGAGCACTGCTGGGCGCCTTCTCAATGATATCCAAGGGTTTAAGAGGGAATCTGCAGAAGGGAAGCTAAATGCTGTGTCCTTGGCCATGATTCATGGCAACGGCGTTACCGAGGAAGAGGCCATTAACGAGATGAAGAATGTAATAGTCAGCAAGAGGAGAGAATTGCTAAGATTAGTTTTGCTCGAGAAGGGTAGCGTAGTTCCGAGAGCTTGCAAAGATTTGTTTTGGAACATGAGCAAAGTGCTGCACCTGTTTTACGCTAAGCATGATGGATTCACAGCACATGATATGATGAAGACGGTAAATGCAGTAATGGAAGAACCTATCCTTCTCAGCGAACTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009899 GO:0009987 GO:0010033 GO:0010333 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

796

Amino Acids

89.99

Weight (kDa)

5.52

Isoelectric Point (pI)

46.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	228 - 420	1.4e-38	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	498 - 734	7.3e-72	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	538 - 734	3.9e-46	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79460
fragaria_vesca	FvH4_3g14116 FvH4_3g14130 FvH4_3g14131 FvH4_3g16270
malus_domestica	MD03G1187200.v1.1 MD10G1215700.v1.1 MD10G1215900.v1.1 MD10G1216200.v1.1
prunus_persica	Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128600_v2.0.a1 Prupe.4G128700_v2.0.a1
pyrus_communis	pycom03g13990 pycom10g18220
rosa_chinensis	RchiOBHm_Chr5g0023441 RchiOBHm_Chr5g0023471 RchiOBHm_Chr5g0023641
rosa_laevigata	RLG00000032721
rosa_multiflora	Rmu_co8406553.1_g000001 Rmu_sc0004593.1_g000004 Rmu_sc0005664.1_g000001 Rmu_sc0005664.1_g000005
rosa_roxburghii	Rroxscaffold_1G00055600 Rroxscaffold_1G00055620 Rroxscaffold_1G00055910
rosa_rugosa	Rorug05G0079200 Rorug05G0079300
rosa_samantha	Rh5AG166100 Rh5AG166200 Rh5AG166300 Rh5AG167600 Rh5AG168000 Rh5BG165300 Rh5BG165500 Rh5CG180300 Rh5CG180400 Rh5CG181400 Rh5DG166800 Rh5DG166900 Rh5DG167800
rosa_wichuraiana	Rw0G019600 Rw5G014950 Rw5G014970 Rw5G015110 Rw5G015120 Rw5G015210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1001
Acc16I	TGCGCA	1 cut(s)	997
Acc36I	ACCTGC	1 cut(s)	1001
AccB1I	GGYRCC	1 cut(s)	2055
AciI	CCGC	3 cut(s)	119, 747, 1801
AclI	AACGTT	1 cut(s)	641
AclWI	GGATC	1 cut(s)	1040
AcoI	YGGCCR	1 cut(s)	2124
AcsI	RAATTY	3 cut(s)	532, 886, 2018
AcuI	CTGAAG	4 cut(s)	441, 1122, 1226, 1781
AcyI	GRCGYC	2 cut(s)	573, 2056
AfaI	GTAC	5 cut(s)	154, 791, 930, 1357, 1496
AfiI	CCNNNNNNNGG	4 cut(s)	553, 1092, 1270, 1417
AflII	CTTAAG	2 cut(s)	767, 785
AflIII	ACRYGT	1 cut(s)	1018
AgsI	TTSAA	8 cut(s)	93, 443, 538, 884, 1390, 1435, 1742, 1867
AhdI	GACNNNNNGTC	1 cut(s)	1955
AjnI	CCWGG	3 cut(s)	690, 1322, 1787
AjuI	GAANNNNNNNTTGG	2 cut(s)	536, 568
Alw21I	GWGCWC	2 cut(s)	562, 2048
Alw26I	GTCTC	1 cut(s)	585
Alw44I	GTGCAC	1 cut(s)	558
AlwI	GGATC	1 cut(s)	1040
AlwNI	CAGNNNCTG	3 cut(s)	464, 951, 986
Ama87I	CYCGRG	1 cut(s)	2225
AoxI	GGCC	6 cut(s)	1261, 1309, 1602, 1982, 2124, 2160
ApaLI	GTGCAC	1 cut(s)	558
ApeKI	GCWGC	9 cut(s)	86, 116, 131, 872, 955, 986, 1553, 1556, 2287
ApoI	RAATTY	3 cut(s)	532, 886, 2018
ArsI	GACNNNNNNTTYG	2 cut(s)	1599, 1631
Asp700I	GAANNNNTTC	2 cut(s)	176, 1167
AspLEI	GCGC	2 cut(s)	998, 2058
AspS9I	GGNCC	9 cut(s)	232, 256, 320, 688, 720, 1309, 1602, 1949, 1982
AsuHPI	GGTGA	5 cut(s)	5, 39, 726, 755, 974
AvaI	CYCGRG	1 cut(s)	2225
AvaII	GGWCC	6 cut(s)	232, 256, 320, 688, 720, 1949
BaeGI	GKGCMC	1 cut(s)	562
BalI	TGGCCA	1 cut(s)	2126
BanI	GGYRCC	1 cut(s)	2055
BarI	GAAGNNNNNNTAC	2 cut(s)	1520, 1552
BbsI	GAAGAC	1 cut(s)	2345
Bbv12I	GWGCWC	2 cut(s)	562, 2048
BbvCI	CCTCAGC	1 cut(s)	17
BbvI	GCAGC	9 cut(s)	98, 118, 128, 859, 942, 973, 1540, 1543, 2274
BccI	CCATC	5 cut(s)	302, 745, 1154, 1479, 2306
BceAI	ACGGC	1 cut(s)	2158
BciT130I	CCWGG	3 cut(s)	692, 1324, 1789
BclI	TGATCA	2 cut(s)	1851, 2023
BcoDI	GTCTC	1 cut(s)	585
BfaI	CTAG	7 cut(s)	569, 806, 845, 1172, 1265, 1479, 1521
BfmI	CTRYAG	4 cut(s)	956, 1041, 2004, 2094
BfoI	RGCGCY	1 cut(s)	2059
BfrI	CTTAAG	2 cut(s)	767, 785
BfuAI	ACCTGC	1 cut(s)	1001
BlpI	GCTNAGC	1 cut(s)	2304
Bme1390I	CCNGG	3 cut(s)	692, 1324, 1789
Bme18I	GGWCC	6 cut(s)	232, 256, 320, 688, 720, 1949
BmeRI	GACNNNNNGTC	1 cut(s)	1955
BmeT110I	CYCGRG	1 cut(s)	2225
BmgT120I	GGNCC	9 cut(s)	232, 256, 320, 688, 720, 1309, 1602, 1949, 1982
BmiI	GGNNCC	9 cut(s)	234, 258, 321, 689, 721, 1657, 1786, 1950, 2057
BmrFI	CCNGG	3 cut(s)	692, 1324, 1789
BmsI	GCATC	6 cut(s)	343, 387, 973, 1105, 1267, 1576
BoxI	GACNNNNGTC	1 cut(s)	1628
BpiI	GAAGAC	1 cut(s)	2345
Bpu10I	CCTNAGC	3 cut(s)	17, 370, 1986
Bpu1102I	GCTNAGC	1 cut(s)	2304
Bsa29I	ATCGAT	1 cut(s)	1110
BsaAI	YACGTR	1 cut(s)	1019
BsaHI	GRCGYC	2 cut(s)	573, 2056
BsaJI	CCNNGG	7 cut(s)	552, 1087, 1788, 1944, 2074, 2121, 2151
BsaXI	ACNNNNNCTCC	2 cut(s)	786, 816
Bsc4I	CCNNNNNNNGG	4 cut(s)	553, 1092, 1270, 1417
Bse118I	RCCGGY	1 cut(s)	1311
Bse1I	ACTGG	4 cut(s)	287, 876, 936, 1193
Bse3DI	GCAATG	2 cut(s)	234, 1005
BseBI	CCWGG	3 cut(s)	692, 1324, 1789
BseCI	ATCGAT	1 cut(s)	1110
BseDI	CCNNGG	7 cut(s)	552, 1087, 1788, 1944, 2074, 2121, 2151
BseGI	GGATG	6 cut(s)	378, 940, 1153, 1279, 1432, 1708
BseLI	CCNNNNNNNGG	4 cut(s)	553, 1092, 1270, 1417
BseMI	GCAATG	2 cut(s)	234, 1005
BseMII	CTCAG	2 cut(s)	31, 639
BseNI	ACTGG	4 cut(s)	287, 876, 936, 1193
BseRI	GAGGAG	4 cut(s)	1505, 1925, 2012, 2212
BseSI	GKGCMC	1 cut(s)	562
BseXI	GCAGC	9 cut(s)	98, 118, 128, 859, 942, 973, 1540, 1543, 2274
BseYI	CCCAGC	1 cut(s)	2051
BsgI	GTGCAG	2 cut(s)	510, 2273
BshFI	GGCC	6 cut(s)	1263, 1311, 1604, 1984, 2126, 2162
BshNI	GGYRCC	1 cut(s)	2055
BshVI	ATCGAT	1 cut(s)	1110
BsiHKAI	GWGCWC	2 cut(s)	562, 2048
BsiHKCI	CYCGRG	1 cut(s)	2225
BsiSI	CCGG	1 cut(s)	1312
BslFI	GGGAC	3 cut(s)	218, 701, 1962
BslI	CCNNNNNNNGG	4 cut(s)	553, 1092, 1270, 1417
BsmAI	GTCTC	1 cut(s)	585
BsmFI	GGGAC	3 cut(s)	218, 701, 1962
BsmI	GAATGC	4 cut(s)	278, 778, 826, 1793
BsnI	GGCC	6 cut(s)	1263, 1311, 1604, 1984, 2126, 2162
BsoBI	CYCGRG	1 cut(s)	2225
Bsp1286I	GDGCHC	2 cut(s)	562, 2048
Bsp143I	GATC	6 cut(s)	190, 898, 1045, 1069, 1851, 2023
Bsp1720I	GCTNAGC	1 cut(s)	2304
BspACI	CCGC	3 cut(s)	119, 747, 1801
BspANI	GGCC	6 cut(s)	1263, 1311, 1604, 1984, 2126, 2162
BspCNI	CTCAG	3 cut(s)	30, 638, 2388
BspDI	ATCGAT	1 cut(s)	1110
BspHI	TCATGA	2 cut(s)	696, 2040
BspLI	GGNNCC	9 cut(s)	234, 258, 321, 689, 721, 1657, 1786, 1950, 2057
BspMAI	CTGCAG	3 cut(s)	960, 1045, 2098
BspMI	ACCTGC	1 cut(s)	1001
BspPI	GGATC	1 cut(s)	1040
BspT107I	GGYRCC	1 cut(s)	2055
BspTI	CTTAAG	2 cut(s)	767, 785
BsrDI	GCAATG	2 cut(s)	234, 1005
BsrFI	RCCGGY	1 cut(s)	1311
BsrI	ACTGG	4 cut(s)	287, 876, 936, 1193
BssAI	RCCGGY	1 cut(s)	1311
BssECI	CCNNGG	7 cut(s)	552, 1087, 1788, 1944, 2074, 2121, 2151
BssMI	GATC	6 cut(s)	190, 898, 1045, 1069, 1851, 2023
BssNI	GRCGYC	2 cut(s)	573, 2056
BssT1I	CCWWGG	5 cut(s)	552, 1087, 1944, 2074, 2121
Bst2UI	CCWGG	3 cut(s)	692, 1324, 1789
Bst4CI	ACNGT	6 cut(s)	835, 1457, 1541, 1627, 2344, 2385
Bst6I	CTCTTC	3 cut(s)	583, 1656, 2151
BstACI	GRCGYC	2 cut(s)	573, 2056
BstAFI	CTTAAG	2 cut(s)	767, 785
BstBAI	YACGTR	1 cut(s)	1019
BstC8I	GCNNGC	7 cut(s)	376, 619, 953, 1419, 1533, 1591, 2254
BstDEI	CTNAG	9 cut(s)	17, 370, 625, 646, 1120, 1986, 2210, 2304, 2375
BstF5I	GGATG	6 cut(s)	378, 940, 1153, 1279, 1432, 1708
BstH2I	RGCGCY	1 cut(s)	2059
BstHHI	GCGC	2 cut(s)	998, 2058
BstKTI	GATC	6 cut(s)	193, 901, 1048, 1072, 1854, 2026
BstMAI	GTCTC	1 cut(s)	585
BstMBI	GATC	6 cut(s)	190, 898, 1045, 1069, 1851, 2023
BstMWI	GCNNNNNNNGC	3 cut(s)	224, 618, 995
BstNI	CCWGG	3 cut(s)	692, 1324, 1789
BstNSI	RCATGY	1 cut(s)	378
BstPAI	GACNNNNGTC	1 cut(s)	1628
BstSCI	CCNGG	3 cut(s)	690, 1322, 1787
BstSFI	CTRYAG	4 cut(s)	956, 1041, 2004, 2094
BstSLI	GKGCMC	1 cut(s)	562
BstV1I	GCAGC	9 cut(s)	98, 118, 128, 859, 942, 973, 1540, 1543, 2274
BstV2I	GAAGAC	1 cut(s)	2345
BstX2I	RGATCY	1 cut(s)	1045
BstYI	RGATCY	1 cut(s)	1045
Bsu15I	ATCGAT	1 cut(s)	1110
BsuRI	GGCC	6 cut(s)	1263, 1311, 1604, 1984, 2126, 2162
BsuTUI	ATCGAT	1 cut(s)	1110
BtgZI	GCGATG	1 cut(s)	527
BtsCI	GGATG	6 cut(s)	378, 940, 1153, 1279, 1432, 1708
BtsI	GCAGTG	4 cut(s)	213, 401, 1819, 2046
BtsIMutI	CAGTG	8 cut(s)	133, 213, 401, 527, 1186, 1757, 1819, 2046
BveI	ACCTGC	1 cut(s)	1001
Cac8I	GCNNGC	7 cut(s)	376, 619, 953, 1419, 1533, 1591, 2254
CaiI	CAGNNNCTG	3 cut(s)	464, 951, 986
CciI	TCATGA	2 cut(s)	696, 2040
CfoI	GCGC	2 cut(s)	998, 2058
Cfr10I	RCCGGY	1 cut(s)	1311
Cfr13I	GGNCC	9 cut(s)	232, 256, 320, 688, 720, 1309, 1602, 1949, 1982
ClaI	ATCGAT	1 cut(s)	1110
CseI	GACGC	2 cut(s)	581, 1818
CsiI	ACCWGGT	1 cut(s)	690
Csp6I	GTAC	5 cut(s)	153, 790, 929, 1356, 1495
CviQI	GTAC	5 cut(s)	153, 790, 929, 1356, 1495
DdeI	CTNAG	9 cut(s)	17, 370, 625, 646, 1120, 1986, 2210, 2304, 2375
DinI	GGCGCC	1 cut(s)	2057
DpnI	GATC	6 cut(s)	192, 900, 1047, 1071, 1853, 2025
DpnII	GATC	6 cut(s)	190, 898, 1045, 1069, 1851, 2023
DraI	TTTAAA	1 cut(s)	1368
DriI	GACNNNNNGTC	1 cut(s)	1955
EaeI	YGGCCR	1 cut(s)	2124
Eam1104I	CTCTTC	3 cut(s)	583, 1656, 2151
Eam1105I	GACNNNNNGTC	1 cut(s)	1955
EarI	CTCTTC	3 cut(s)	583, 1656, 2151
Eco130I	CCWWGG	5 cut(s)	552, 1087, 1944, 2074, 2121
Eco32I	GATATC	1 cut(s)	2071
Eco47I	GGWCC	6 cut(s)	232, 256, 320, 688, 720, 1949
Eco57I	CTGAAG	4 cut(s)	441, 1122, 1226, 1781
Eco88I	CYCGRG	1 cut(s)	2225
EcoO109I	RGGNCCY	4 cut(s)	256, 320, 688, 720
EcoRII	CCWGG	3 cut(s)	690, 1322, 1787
EcoRV	GATATC	1 cut(s)	2071
EcoT14I	CCWWGG	5 cut(s)	552, 1087, 1944, 2074, 2121
EcoT22I	ATGCAT	2 cut(s)	380, 1930
EgeI	GGCGCC	1 cut(s)	2057
EheI	GGCGCC	1 cut(s)	2057
ErhI	CCWWGG	5 cut(s)	552, 1087, 1944, 2074, 2121
FalI	AAGNNNNNCTT	2 cut(s)	1499, 1531
FaqI	GGGAC	3 cut(s)	218, 701, 1962
FauNDI	CATATG	1 cut(s)	1930
FbaI	TGATCA	2 cut(s)	1851, 2023
FokI	GGATG	6 cut(s)	365, 947, 1140, 1286, 1439, 1715
FspBI	CTAG	7 cut(s)	569, 806, 845, 1172, 1265, 1479, 1521
FspI	TGCGCA	1 cut(s)	997
GlaI	GCGC	2 cut(s)	997, 2057
GsaI	CCCAGC	1 cut(s)	2055
HaeII	RGCGCY	1 cut(s)	2059
HaeIII	GGCC	6 cut(s)	1263, 1311, 1604, 1984, 2126, 2162
HapII	CCGG	1 cut(s)	1312
HgaI	GACGC	2 cut(s)	581, 1818
HhaI	GCGC	2 cut(s)	998, 2058
Hin1I	GRCGYC	2 cut(s)	573, 2056
Hin6I	GCGC	2 cut(s)	996, 2056
HinP1I	GCGC	2 cut(s)	996, 2056
HincII	GTYRAC	1 cut(s)	1320
HindII	GTYRAC	1 cut(s)	1320
HindIII	AAGCTT	1 cut(s)	1988
HpaII	CCGG	1 cut(s)	1312
HphI	GGTGA	5 cut(s)	5, 39, 726, 755, 974
Hpy166II	GTNNAC	4 cut(s)	345, 560, 929, 1320
Hpy8I	GTNNAC	4 cut(s)	345, 560, 929, 1320
HpyAV	CCTTC	8 cut(s)	557, 656, 1096, 1970, 2069, 2093, 2224, 2381
HpyCH4III	ACNGT	6 cut(s)	835, 1457, 1541, 1627, 2344, 2385
HpyCH4IV	ACGT	3 cut(s)	641, 1018, 1647
HpyF10VI	GCNNNNNNNGC	3 cut(s)	224, 618, 995
HpyF3I	CTNAG	9 cut(s)	17, 370, 625, 646, 1120, 1986, 2210, 2304, 2375
HpySE526I	ACGT	3 cut(s)	641, 1018, 1647
Hsp92I	GRCGYC	2 cut(s)	573, 2056
HspAI	GCGC	2 cut(s)	996, 2056
KasI	GGCGCC	1 cut(s)	2055
Ksp22I	TGATCA	2 cut(s)	1851, 2023
Kzo9I	GATC	6 cut(s)	190, 898, 1045, 1069, 1851, 2023
LmnI	GCTCC	1 cut(s)	1784
Lsp1109I	GCAGC	9 cut(s)	98, 118, 128, 859, 942, 973, 1540, 1543, 2274
LweI	GCATC	6 cut(s)	343, 387, 973, 1105, 1267, 1576
MabI	ACCWGGT	1 cut(s)	690
MaeI	CTAG	7 cut(s)	569, 806, 845, 1172, 1265, 1479, 1521
MaeII	ACGT	3 cut(s)	641, 1018, 1647
MaeIII	GTNAC	3 cut(s)	1541, 1816, 2146
MalI	GATC	6 cut(s)	192, 900, 1047, 1071, 1853, 2025
MboI	GATC	6 cut(s)	190, 898, 1045, 1069, 1851, 2023
MfeI	CAATTG	1 cut(s)	1685
MflI	RGATCY	1 cut(s)	1045
MhlI	GDGCHC	2 cut(s)	562, 2048
MlsI	TGGCCA	1 cut(s)	2126
MluNI	TGGCCA	1 cut(s)	2126
Mly113I	GGCGCC	1 cut(s)	2056
MlyI	GAGTC	5 cut(s)	530, 1005, 1204, 1623, 2031
MmeI	TCCRAC	5 cut(s)	469, 854, 1630, 1824, 1925
Mox20I	TGGCCA	1 cut(s)	2126
Mph1103I	ATGCAT	2 cut(s)	380, 1930
MroXI	GAANNNNTTC	2 cut(s)	176, 1167
MscI	TGGCCA	1 cut(s)	2126
MslI	CAYNNNNRTG	1 cut(s)	1158
Msp20I	TGGCCA	1 cut(s)	2126
MspA1I	CMGCKG	1 cut(s)	119
MspCI	CTTAAG	2 cut(s)	767, 785
MspI	CCGG	1 cut(s)	1312
MspR9I	CCNGG	3 cut(s)	692, 1324, 1789
MunI	CAATTG	1 cut(s)	1685
Mva1269I	GAATGC	4 cut(s)	278, 778, 826, 1793
MvaI	CCWGG	3 cut(s)	692, 1324, 1789
MwoI	GCNNNNNNNGC	3 cut(s)	224, 618, 995
NarI	GGCGCC	1 cut(s)	2056
NdeI	CATATG	1 cut(s)	1930
NdeII	GATC	6 cut(s)	190, 898, 1045, 1069, 1851, 2023
NlaIV	GGNNCC	9 cut(s)	234, 258, 321, 689, 721, 1657, 1786, 1950, 2057
NmeAIII	GCCGAG	1 cut(s)	126
NmuCI	GTSAC	1 cut(s)	1816
NsbI	TGCGCA	1 cut(s)	997
NsiI	ATGCAT	2 cut(s)	380, 1930
NspI	RCATGY	1 cut(s)	378
PaeI	GCATGC	1 cut(s)	378
PaeR7I	CTCGAG	1 cut(s)	2225
PagI	TCATGA	2 cut(s)	696, 2040
PaqCI	CACCTGC	1 cut(s)	1001
PcsI	WCGNNNNNNNCGW	3 cut(s)	203, 1015, 2148
PctI	GAATGC	4 cut(s)	278, 778, 826, 1793
PdmI	GAANNNNTTC	2 cut(s)	176, 1167
PfeI	GAWTC	5 cut(s)	443, 1163, 2090, 2131, 2316
PflFI	GACNNNGTC	1 cut(s)	692
PleI	GAGTC	5 cut(s)	529, 1005, 1203, 1622, 2031
PluTI	GGCGCC	1 cut(s)	2059
PpsI	GAGTC	5 cut(s)	529, 1005, 1203, 1622, 2031
Ppu21I	YACGTR	1 cut(s)	1019
PpuMI	RGGWCCY	4 cut(s)	256, 320, 688, 720
PshAI	GACNNNNGTC	1 cut(s)	1628
Psp1406I	AACGTT	1 cut(s)	641
Psp5II	RGGWCCY	4 cut(s)	256, 320, 688, 720
Psp6I	CCWGG	3 cut(s)	690, 1322, 1787
PspFI	CCCAGC	1 cut(s)	2051
PspGI	CCWGG	3 cut(s)	690, 1322, 1787
PspN4I	GGNNCC	9 cut(s)	234, 258, 321, 689, 721, 1657, 1786, 1950, 2057
PspPI	GGNCC	9 cut(s)	232, 256, 320, 688, 720, 1309, 1602, 1949, 1982
PspPPI	RGGWCCY	4 cut(s)	256, 320, 688, 720
PstI	CTGCAG	3 cut(s)	960, 1045, 2098
PstNI	CAGNNNCTG	3 cut(s)	464, 951, 986
PsuI	RGATCY	1 cut(s)	1045
PsyI	GACNNNGTC	1 cut(s)	692
RsaI	GTAC	5 cut(s)	154, 791, 930, 1357, 1496
RsaNI	GTAC	5 cut(s)	153, 790, 929, 1356, 1495
RseI	CAYNNNNRTG	1 cut(s)	1158
Sau3AI	GATC	6 cut(s)	190, 898, 1045, 1069, 1851, 2023
Sau96I	GGNCC	9 cut(s)	232, 256, 320, 688, 720, 1309, 1602, 1949, 1982
SchI	GAGTC	5 cut(s)	530, 1005, 1204, 1623, 2031
ScrFI	CCNGG	3 cut(s)	692, 1324, 1789
SduI	GDGCHC	2 cut(s)	562, 2048
SexAI	ACCWGGT	1 cut(s)	690
SfaNI	GCATC	6 cut(s)	343, 387, 973, 1105, 1267, 1576
SfcI	CTRYAG	4 cut(s)	956, 1041, 2004, 2094
SfoI	GGCGCC	1 cut(s)	2057
Sfr274I	CTCGAG	1 cut(s)	2225
SinI	GGWCC	6 cut(s)	232, 256, 320, 688, 720, 1949
SlaI	CTCGAG	1 cut(s)	2225
SmiMI	CAYNNNNRTG	1 cut(s)	1158
SmlI	CTYRAG	3 cut(s)	767, 785, 2225
SmoI	CTYRAG	3 cut(s)	767, 785, 2225
SphI	GCATGC	1 cut(s)	378
SsiI	CCGC	3 cut(s)	119, 747, 1801
SspDI	GGCGCC	1 cut(s)	2055
SspI	AATATT	3 cut(s)	1061, 1340, 1393
SspMI	CTAG	7 cut(s)	569, 806, 845, 1172, 1265, 1479, 1521
StyD4I	CCNGG	3 cut(s)	690, 1322, 1787
StyI	CCWWGG	5 cut(s)	552, 1087, 1944, 2074, 2121
TaaI	ACNGT	6 cut(s)	835, 1457, 1541, 1627, 2344, 2385
TaiI	ACGT	3 cut(s)	644, 1021, 1650
TaqI	TCGA	7 cut(s)	180, 901, 1009, 1110, 1632, 2035, 2226
TaqII	GACCGA	1 cut(s)	1966
TatI	WGTACW	3 cut(s)	928, 1355, 1494
TauI	GCSGC	1 cut(s)	1804
TfiI	GAWTC	5 cut(s)	443, 1163, 2090, 2131, 2316
TscAI	CASTG	8 cut(s)	133, 220, 401, 534, 1193, 1764, 1819, 2053
TseFI	GTSAC	1 cut(s)	1816
TseI	GCWGC	9 cut(s)	86, 116, 131, 872, 955, 986, 1553, 1556, 2287
Tsp45I	GTSAC	1 cut(s)	1816
TspRI	CASTG	8 cut(s)	133, 220, 401, 534, 1193, 1764, 1819, 2053
Tth111I	GACNNNGTC	1 cut(s)	692
Vha464I	CTTAAG	2 cut(s)	767, 785
VneI	GTGCAC	1 cut(s)	558
VpaK11BI	GGWCC	6 cut(s)	232, 256, 320, 688, 720, 1949
XapI	RAATTY	3 cut(s)	532, 886, 2018
XbaI	TCTAGA	2 cut(s)	844, 1171
XceI	RCATGY	1 cut(s)	378
XcmI	CCANNNNNNNNNTGG	1 cut(s)	997
XhoI	CTCGAG	1 cut(s)	2225
XmnI	GAANNNNTTC	2 cut(s)	176, 1167
XspI	CTAG	7 cut(s)	569, 806, 845, 1172, 1265, 1479, 1521
Zsp2I	ATGCAT	2 cut(s)	380, 1930

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.