pycom16g19630

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0000554
Physical Location & Seq
Forward (+)
16807263 .. 16821232
13970 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3129 bp
ATGCAGCCCCGCCCTGATTCATTAGCCGATAATATGCAGAATATGAATCTTAATCGACCGCCTTCCATGCCTAATTCTGCCCCTCCTAGACCATCCCCTTTCGGCCAACCGCCCCCAGCCCCTCCTGCCGGTGCCGGGAATCCTTCTGTACCACCTCCTTTTTCTCGGCCCGGCCCTCCCCCGGCTGCCTTTGCAAGACCCGCAGCACCAGCACCGCGATCGGGAACCCCGCAGCCAACACTATCCCCAGCCACCACCCCAGTAAGACCCGCCGGGCCGCCGGTTGGCCAGCCTTCCTCTTTCCCGTCTCGACCGCCTCCTGGGTCGTTTCCCCCTGTGGGCGGGGTAGCTTCTGCTTCTGGGCCACCACCAATTGGTCCAATTGGTCCGGCATCAGGTCCTCGCCCAGGTCCTCAGAGCATGCCGCCTACGACTGCACCGGGTGGAATGTTGAGTAATGGGCCACCAATGTTTGGTTACGGTGCTATGCCGGGTGGACCTCGTTTCCCTCCCAGTGGAAATGCACCTCAACCACCTGTTGGACATCCACCAGCAATGGCACCAGCAGCAGCCGCGGGTCCACCACGAACCCCATCCATGCACTCTGTGCTGGGTGGTTCGTTAGTTAGTTCTCCACAAGGTCCTACTGTTCAGCAGCCACCACCATTTTCGGCAGCCCCGCCATTTTCGGCAGCACCTCAAAGCATGCGGCCACCACCTCCAGGCTCTCCCTATGGCTCACAGACATGGCCAGTGCAACAAGGGCAGGTGGCTCCACCTTCTCAATTTCCTGGTTCTGCTCAACCACCTAGAATGTTTGGAATGCCACCCCCAACACTACCAAATCAGTCCATGACTACCATCTCACCTGCTGGTCAAACTGGTACTCCTTCGGCTGGGTCATCCAAGATTGATCGATCATCCACTCAAATTCCTCGGCCTATACCAAGTTCATCGATGCTCATTCATGAAACTCGTCAAGGCAATCAGGCAAATCCACCTCCGCCTGCTACAACTGATTATATAGTCAGAGACACTGGGAATTGCAGTCCACGTTACATGAGGTGCACCATCAATCAGATACCATGCACTGCAGATCTTTTAACAACGTCAGGGATGCCATTAGCTTTGTTGGTTGAACCTTTTGCCCTTCCTCATCCAAATGAGGAACCAATCCAAGTGGTGGATTTCGGTGAAAGTGGTCCTGTTCGATGCTCTCGTTGCAAAGGCTACATAAATCCTTTCATGAAGTTCATTGACCAGGGCAGGAAATTCATCTGTAATCTTTGTGGATTTACTGATGAGACTCCCCGTGACTACCACTGCAATCTTGGTCCAGATGGTAGACGTAGAGATGCTGATGAGAGGCCTGAGCTATGTAGAGGAACAGTTGAATTTGTTGCTTCAAAAGAATACATGGTACGTGATCCCATGCCAGCTGTGTACTTCTTCCTCATTGATGTATCCATGAATGCCATTCAAACTGGTGCAACAGCTGCAGCTTGCAGTGCACTCAGTCAAGTTATTGATGATCTTCCGCCTTTGATGCTTATTGTTCCTGATGTGCAAGATGTTTACACTCCTCTGCAGACTGATGTAGTGGTCCAGCTTTCTGAGTGCCGCCAACATTTGGAGCAATTGTTGGAAAGTATTCCAACCATGTTTCAAAACAGTAAAACTGCTGAATCAGCCTTTGGTGCGGCAATCGAGGCTGCTTTCTTGGCAATTAAGAGTACTGGAGGGAAACTTTTGGTGTTTCAGTCAGTGTTGGCATCAACTGGAATTGGAGCCCTCTCTGCTAGGGAGGCCGAAGGAAGAGCAAATATATCCTCAGCTGAGAAGGAGGCCCATAAATTACTCCAACCAGCTGACAAAACTTTAAAGACAATGGCAATTGAGTTTGCTGAATATCAAGTTTGTGTCGACTTGTTTATCACTACTCAGTCATACATAGACATTGCTTCTATCTCTGTCATCCCAAGAACAACGGGAGGACAGCTTTACTATTACTACCCCTTCTCAGCTGTCTCTGATCGATCAAAGCTCTACATCGATCTTAGATGGAATGTCACAAGGCCTCAAGGTTTTGAGGCGGTGATGCGTGTAAGATGCAGCCAGGGTATTCAAGTTCAAGATTACCATGGAAGCTTTTGCAAACGTATTCCTACGGATGTTGACCTACCTGGGATTGACTGTGACAAAACTATTATGGTGACCTTAAAACATGATGATAAATTACAGGATGGCTCAGAATGTGGTTTCCAGTGTGCTGTTTTATACACAACTGTGTATGGCCAACGGAGAATTCGAGTTGCAACTTTATCTCTGCCATGCACAAGTATGCTAAGTAATTTGTTCCGTGCTGCTGATTTGGACACTCAATTTGCATGTTTCATGAAGCAAGCGGCAAACGAAATTCCTTCAAGTCCCCTCTTGCGTGTACGGGAACAAGTGACAAATCTGTGCATTAGTAGTCTGCTTTCATATCGTAAATTTTGTGCTACGGTATCATCTTCTGGACAGCTTATTTTACCGGAGGCACTGAAGCTCCTGCCTCTATACACCCTTGCATTAATCAAAAGTATGGGGCTACGAACTGATGGAAAAATAGATGAGCGGTCCTTCTGGATCAACCATGTTTCTTCCCTTTCGGTTCCTTTGGCTGTTCCACTAGTGTACCCGAGAATGGTGGCTATTCATGACCTCGAATCCAAAAGGGAGGGAGATGATTCTCTAATACCTCCGGTGATTCCGCTTTCTAGCGAACACGTGCGTGACGAGGGAATTTATCTTCTCGAGAATGGTGAGGACTGTTTAATATATATTGGGAATTTGGTGGATTCTGGAATTTTGCAACAAGTATTTGGAATCACCTCTGCTGATGAACTTCCCACTCAGTTTGTGCTACAGCAGTATGATAATCCATTATCAAAGAAGCTGAATGATGTGGTAAATGAAATACGGCGCCAGAGATGTTCCTACCTTCGCTTAAAATTATGTAAGAAAGGAGATCCATCAGGAACATTGTTTTTCTCATATATGGTCGAAGACCAGAGTCCGAATGGCCCCTCCTACGTTGAATTTCTGGTGCATGTCCATCGGCAAATACAAATAAAAATGGCATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

1043

Amino Acids

112.13

Weight (kDa)

7.15

Isoelectric Point (pI)

56.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 402 - 440 1.4e-16 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 477 - 514 6.7e-09 Sec23/Sec24 trunk domain
Sec23_trunk PF04811 514 - 690 6.8e-50 Sec23/Sec24 trunk domain
Sec23_BS PF08033 695 - 779 5.5e-26 Sec23/Sec24 beta-sandwich domain
Sec23_helical PF04815 790 - 888 1.2e-24 Sec23/Sec24 helical domain
Gelsolin PF00626 914 - 981 2.7e-07 Gelsolin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 757, 877
Acc36I ACCTGC 2 cut(s) 757, 877
AccB1I GGYRCC 3 cut(s) 131, 559, 2964
AccB7I CCANNNNNTGG 5 cut(s) 374, 473, 539, 1183, 1630
AccBSI CCGCTC 1 cut(s) 2617
AccI GTMKAC 2 cut(s) 1345, 1923
AccII CGCG 2 cut(s) 217, 575
AclWI GGATC 3 cut(s) 1421, 2636, 3005
AcoI YGGCCR 5 cut(s) 103, 286, 710, 749, 2293
AcuI CTGAAG 1 cut(s) 2564
AcvI CACGTG 1 cut(s) 2770
AcyI GRCGYC 1 cut(s) 2965
AdeI CACNNNGTG 2 cut(s) 443, 607
AfaI GTAC 7 cut(s) 150, 886, 1422, 1445, 1735, 2442, 2678
AflIII ACRYGT 1 cut(s) 2767
AgsI TTSAA 9 cut(s) 1139, 1394, 1407, 1481, 1667, 2126, 2132, 2424, 3080
AhlI ACTAGT 1 cut(s) 2671
AjnI CCWGG 7 cut(s) 319, 406, 721, 790, 1260, 2115, 2182
AjuI GAANNNNNNNTTGG 4 cut(s) 1677, 1709, 2289, 2321
AleI CACNNNNGTG 2 cut(s) 2285, 2772
Alw21I GWGCWC 2 cut(s) 1070, 1513
Alw26I GTCTC 4 cut(s) 312, 1026, 1298, 2032
Alw44I GTGCAC 2 cut(s) 1066, 1509
AlwI GGATC 3 cut(s) 1421, 2636, 3005
Ama87I CYCGRG 2 cut(s) 2680, 2795
ApaLI GTGCAC 2 cut(s) 1066, 1509
ArsI GACNNNNNNTTYG 2 cut(s) 2366, 2398
AseI ATTAAT 1 cut(s) 2573
Asp700I GAANNNNTTC 1 cut(s) 1650
AspLEI GCGC 1 cut(s) 2967
AsuC2I CCSGG 6 cut(s) 136, 171, 182, 274, 441, 492
AsuHPI GGTGA 7 cut(s) 858, 1205, 2107, 2224, 2758, 2816, 2863
AvaI CYCGRG 2 cut(s) 2680, 2795
BaeGI GKGCMC 2 cut(s) 1070, 1513
BaeI ACNNNNGTAYC 2 cut(s) 2660, 2693
BalI TGGCCA 3 cut(s) 288, 751, 2295
BanI GGYRCC 3 cut(s) 131, 559, 2964
BanII GRGCYC 1 cut(s) 1792
BbrPI CACGTG 1 cut(s) 2770
BbsI GAAGAC 1 cut(s) 3054
Bbv12I GWGCWC 2 cut(s) 1070, 1513
BbvCI CCTCAGC 1 cut(s) 1831
BceAI ACGGC 1 cut(s) 2978
BcgI CGANNNNNNTGC 4 cut(s) 201, 235, 3080, 3114
BciT130I CCWGG 7 cut(s) 321, 408, 723, 792, 1262, 2117, 2184
BciVI GTATCC 1 cut(s) 1474
BcnI CCSGG 6 cut(s) 136, 171, 182, 274, 441, 492
BcoDI GTCTC 4 cut(s) 312, 1026, 1298, 2032
BcuI ACTAGT 1 cut(s) 2671
BfaI CTAG 5 cut(s) 87, 810, 1800, 2672, 2760
BfmI CTRYAG 4 cut(s) 1092, 1497, 1586, 2906
BfoI RGCGCY 1 cut(s) 2968
BfuAI ACCTGC 2 cut(s) 757, 877
BfuI GTATCC 1 cut(s) 1474
BglII AGATCT 1 cut(s) 1096
BmcAI AGTACT 1 cut(s) 1735
BmeT110I CYCGRG 2 cut(s) 2680, 2795
BmrI ACTGGG 3 cut(s) 254, 507, 1047
BmsI GCATC 9 cut(s) 401, 948, 1107, 1202, 1345, 1536, 1781, 2088, 2099
BmuI ACTGGG 3 cut(s) 254, 507, 1047
BoxI GACNNNNGTC 1 cut(s) 3054
BpiI GAAGAC 1 cut(s) 3054
BpmI CTGGAG 2 cut(s) 705, 1758
Bpu10I CCTNAGC 2 cut(s) 1371, 1831
BpuEI CTTGAG 1 cut(s) 2064
BpuMI CCSGG 6 cut(s) 136, 171, 182, 274, 441, 492
Bsa29I ATCGAT 4 cut(s) 916, 956, 2035, 2052
BsaAI YACGTR 2 cut(s) 1424, 2770
BsaHI GRCGYC 1 cut(s) 2965
BsaJI CCNNGG 9 cut(s) 180, 320, 406, 573, 935, 1261, 2116, 2140, 2183
BsaWI WCCGGW 2 cut(s) 2533, 2743
BsaXI ACNNNNNCTCC 6 cut(s) 871, 901, 1625, 1655, 2532, 2562
Bse118I RCCGGY 2 cut(s) 128, 280
Bse1I ACTGG 9 cut(s) 260, 513, 752, 886, 1042, 1489, 1741, 1783, 2263
Bse3DI GCAATG 2 cut(s) 561, 1956
BseBI CCWGG 7 cut(s) 321, 408, 723, 792, 1262, 2117, 2184
BseCI ATCGAT 4 cut(s) 916, 956, 2035, 2052
BseDI CCNNGG 9 cut(s) 180, 320, 406, 573, 935, 1261, 2116, 2140, 2183
BseMI GCAATG 2 cut(s) 561, 1956
BseNI ACTGG 9 cut(s) 260, 513, 752, 886, 1042, 1489, 1741, 1783, 2263
BseRI GAGGAG 1 cut(s) 1572
BseSI GKGCMC 2 cut(s) 1070, 1513
BseYI CCCAGC 4 cut(s) 115, 247, 610, 896
BsgI GTGCAG 1 cut(s) 420
Bsh1236I CGCG 2 cut(s) 217, 575
Bsh1285I CGRYCG 3 cut(s) 59, 221, 314
BshNI GGYRCC 3 cut(s) 131, 559, 2964
BshVI ATCGAT 4 cut(s) 916, 956, 2035, 2052
BsiEI CGRYCG 3 cut(s) 59, 221, 314
BsiHKAI GWGCWC 2 cut(s) 1070, 1513
BsiHKCI CYCGRG 2 cut(s) 2680, 2795
BslFI GGGAC 1 cut(s) 2412
BsmAI GTCTC 4 cut(s) 312, 1026, 1298, 2032
BsmBI CGTCTC 1 cut(s) 312
BsmFI GGGAC 1 cut(s) 2412
BsmI GAATGC 2 cut(s) 828, 1477
BsoBI CYCGRG 2 cut(s) 2680, 2795
Bsp1286I GDGCHC 3 cut(s) 1070, 1513, 1792
Bsp19I CCATGG 1 cut(s) 2140
BspDI ATCGAT 4 cut(s) 916, 956, 2035, 2052
BspFNI CGCG 2 cut(s) 217, 575
BspHI TCATGA 4 cut(s) 967, 1245, 2394, 2698
BspMAI CTGCAG 3 cut(s) 1096, 1501, 1590
BspMI ACCTGC 2 cut(s) 757, 877
BspPI GGATC 3 cut(s) 1421, 2636, 3005
BspQI GCTCTTC 1 cut(s) 1810
BspT107I GGYRCC 3 cut(s) 131, 559, 2964
BsrBI CCGCTC 1 cut(s) 2617
BsrDI GCAATG 2 cut(s) 561, 1956
BsrFI RCCGGY 2 cut(s) 128, 280
BsrI ACTGG 9 cut(s) 260, 513, 752, 886, 1042, 1489, 1741, 1783, 2263
BssAI RCCGGY 2 cut(s) 128, 280
BssECI CCNNGG 9 cut(s) 180, 320, 406, 573, 935, 1261, 2116, 2140, 2183
BssNI GRCGYC 1 cut(s) 2965
BssT1I CCWWGG 1 cut(s) 2140
Bst2UI CCWGG 7 cut(s) 321, 408, 723, 792, 1262, 2117, 2184
Bst4CI ACNGT 8 cut(s) 482, 649, 1390, 1673, 2195, 2287, 2506, 2813
Bst6I CTCTTC 1 cut(s) 1810
BstACI GRCGYC 1 cut(s) 2965
BstAPI GCANNNNNTGC 2 cut(s) 607, 1496
BstBAI YACGTR 2 cut(s) 1424, 2770
BstC8I GCNNGC 7 cut(s) 290, 422, 707, 1008, 1437, 1504, 2403
BstDSI CCRYGG 2 cut(s) 573, 2140
BstEII GGTNACC 1 cut(s) 2212
BstENI CCTNNNNNAGG 1 cut(s) 405
BstFNI CGCG 2 cut(s) 217, 575
BstH2I RGCGCY 1 cut(s) 2968
BstHHI GCGC 1 cut(s) 2967
BstMAI GTCTC 4 cut(s) 312, 1026, 1298, 2032
BstMCI CGRYCG 3 cut(s) 59, 221, 314
BstNI CCWGG 7 cut(s) 321, 408, 723, 792, 1262, 2117, 2184
BstNSI RCATGY 4 cut(s) 424, 709, 2391, 3095
BstPAI GACNNNNGTC 1 cut(s) 3054
BstPI GGTNACC 1 cut(s) 2212
BstSFI CTRYAG 4 cut(s) 1092, 1497, 1586, 2906
BstSLI GKGCMC 2 cut(s) 1070, 1513
BstUI CGCG 2 cut(s) 217, 575
BstV2I GAAGAC 1 cut(s) 3054
BstX2I RGATCY 2 cut(s) 1096, 3010
BstYI RGATCY 2 cut(s) 1096, 3010
Bsu15I ATCGAT 4 cut(s) 916, 956, 2035, 2052
BsuI GTATCC 1 cut(s) 1474
BsuTUI ATCGAT 4 cut(s) 916, 956, 2035, 2052
BtgI CCRYGG 2 cut(s) 573, 2140
BtsI GCAGTG 3 cut(s) 1089, 1321, 1513
BtsIMutI CAGTG 9 cut(s) 520, 759, 1035, 1089, 1321, 1513, 1770, 2270, 2540
BveI ACCTGC 2 cut(s) 757, 877
Cac8I GCNNGC 7 cut(s) 290, 422, 707, 1008, 1437, 1504, 2403
CciI TCATGA 4 cut(s) 967, 1245, 2394, 2698
CfoI GCGC 1 cut(s) 2967
Cfr10I RCCGGY 2 cut(s) 128, 280
Cfr42I CCGCGG 1 cut(s) 576
ClaI ATCGAT 4 cut(s) 916, 956, 2035, 2052
Csp6I GTAC 7 cut(s) 149, 885, 1421, 1444, 1734, 2441, 2677
CspCI CAANNNNNGTGG 4 cut(s) 1161, 1196, 2881, 2916
CviQI GTAC 7 cut(s) 149, 885, 1421, 1444, 1734, 2441, 2677
DinI GGCGCC 1 cut(s) 2966
DraI TTTAAA 1 cut(s) 1881
DraIII CACNNNGTG 2 cut(s) 443, 607
EaeI YGGCCR 5 cut(s) 103, 286, 710, 749, 2293
Eam1104I CTCTTC 1 cut(s) 1810
EarI CTCTTC 1 cut(s) 1810
EciI GGCGGA 2 cut(s) 993, 1527
Eco130I CCWWGG 1 cut(s) 2140
Eco147I AGGCCT 2 cut(s) 1369, 2077
Eco24I GRGCYC 1 cut(s) 1792
Eco57I CTGAAG 1 cut(s) 2564
Eco72I CACGTG 1 cut(s) 2770
Eco88I CYCGRG 2 cut(s) 2680, 2795
Eco91I GGTNACC 1 cut(s) 2212
EcoNI CCTNNNNNAGG 1 cut(s) 405
EcoO109I RGGNCCY 3 cut(s) 398, 410, 641
EcoO65I GGTNACC 1 cut(s) 2212
EcoRI GAATTC 1 cut(s) 2304
EcoRII CCWGG 7 cut(s) 319, 406, 721, 790, 1260, 2115, 2182
EcoT14I CCWWGG 1 cut(s) 2140
EcoT38I GRGCYC 1 cut(s) 1792
EgeI GGCGCC 1 cut(s) 2966
EheI GGCGCC 1 cut(s) 2966
ErhI CCWWGG 1 cut(s) 2140
Esp3I CGTCTC 1 cut(s) 312
FaqI GGGAC 1 cut(s) 2412
FauI CCCGC 7 cut(s) 17, 208, 237, 277, 335, 568, 687
FblI GTMKAC 2 cut(s) 1345, 1923
FriOI GRGCYC 1 cut(s) 1792
FspBI CTAG 5 cut(s) 87, 810, 1800, 2672, 2760
GlaI GCGC 1 cut(s) 2966
GsaI CCCAGC 4 cut(s) 119, 251, 614, 900
GsuI CTGGAG 2 cut(s) 705, 1758
HaeII RGCGCY 1 cut(s) 2968
HhaI GCGC 1 cut(s) 2967
Hin1I GRCGYC 1 cut(s) 2965
Hin6I GCGC 1 cut(s) 2965
HinP1I GCGC 1 cut(s) 2965
HincII GTYRAC 2 cut(s) 1924, 2176
HindII GTYRAC 2 cut(s) 1924, 2176
HindIII AAGCTT 1 cut(s) 2146
HphI GGTGA 7 cut(s) 858, 1205, 2107, 2224, 2758, 2816, 2863
Hpy188I TCNGA 7 cut(s) 417, 1031, 1080, 1615, 2032, 2251, 3060
HpyCH4III ACNGT 8 cut(s) 482, 649, 1390, 1673, 2195, 2287, 2506, 2813
HpyCH4IV ACGT 7 cut(s) 1054, 1109, 1348, 1423, 2158, 2769, 3075
HpySE526I ACGT 7 cut(s) 1054, 1109, 1348, 1423, 2158, 2769, 3075
Hsp92I GRCGYC 1 cut(s) 2965
HspAI GCGC 1 cut(s) 2965
KasI GGCGCC 1 cut(s) 2964
KspI CCGCGG 1 cut(s) 576
LguI GCTCTTC 1 cut(s) 1810
LmnI GCTCC 4 cut(s) 778, 1633, 1787, 2553
LweI GCATC 9 cut(s) 401, 948, 1107, 1202, 1345, 1536, 1781, 2088, 2099
MaeI CTAG 5 cut(s) 87, 810, 1800, 2672, 2760
MaeII ACGT 7 cut(s) 1054, 1109, 1348, 1423, 2158, 2769, 3075
MaeIII GTNAC 8 cut(s) 476, 1055, 1313, 2068, 2195, 2212, 2452, 2774
MbiI CCGCTC 1 cut(s) 2617
MboII GAAGA 7 cut(s) 1441, 1526, 1827, 2505, 2634, 2783, 3059
MfeI CAATTG 4 cut(s) 372, 381, 1637, 1893
MflI RGATCY 2 cut(s) 1096, 3010
MhlI GDGCHC 3 cut(s) 1070, 1513, 1792
MlsI TGGCCA 3 cut(s) 288, 751, 2295
MluNI TGGCCA 3 cut(s) 288, 751, 2295
Mly113I GGCGCC 1 cut(s) 2965
MlyI GAGTC 2 cut(s) 1300, 3064
MmeI TCCRAC 4 cut(s) 520, 1623, 1679, 1885
Mox20I TGGCCA 3 cut(s) 288, 751, 2295
MroXI GAANNNNTTC 1 cut(s) 1650
MscI TGGCCA 3 cut(s) 288, 751, 2295
MseI TTAA 8 cut(s) 51, 1103, 1728, 1880, 2219, 2573, 2816, 2990
MslI CAYNNNNRTG 5 cut(s) 745, 1161, 2285, 2339, 2772
Msp20I TGGCCA 3 cut(s) 288, 751, 2295
MspA1I CMGCKG 6 cut(s) 575, 1439, 1496, 1835, 1868, 2024
MunI CAATTG 4 cut(s) 372, 381, 1637, 1893
Mva1269I GAATGC 2 cut(s) 828, 1477
MvaI CCWGG 7 cut(s) 321, 408, 723, 792, 1262, 2117, 2184
MvnI CGCG 2 cut(s) 217, 575
NarI GGCGCC 1 cut(s) 2965
NciI CCSGG 6 cut(s) 136, 171, 182, 274, 441, 492
NcoI CCATGG 1 cut(s) 2140
NmeAIII GCCGAG 2 cut(s) 145, 916
NmuCI GTSAC 6 cut(s) 1313, 2068, 2195, 2212, 2452, 2774
NspI RCATGY 4 cut(s) 424, 709, 2391, 3095
OliI CACNNNNGTG 2 cut(s) 2285, 2772
PaeI GCATGC 2 cut(s) 424, 709
PaeR7I CTCGAG 1 cut(s) 2795
PagI TCATGA 4 cut(s) 967, 1245, 2394, 2698
PaqCI CACCTGC 2 cut(s) 757, 877
PceI AGGCCT 2 cut(s) 1369, 2077
PciSI GCTCTTC 1 cut(s) 1810
PcsI WCGNNNNNNNCGW 3 cut(s) 1216, 2305, 2775
PctI GAATGC 2 cut(s) 828, 1477
PdmI GAANNNNTTC 1 cut(s) 1650
PfeI GAWTC 9 cut(s) 17, 46, 139, 1685, 2708, 2729, 2749, 2840, 2868
PflMI CCANNNNNTGG 5 cut(s) 374, 473, 539, 1183, 1630
Ple19I CGATCG 1 cut(s) 221
PleI GAGTC 2 cut(s) 1300, 3063
PluTI GGCGCC 1 cut(s) 2968
PmaCI CACGTG 1 cut(s) 2770
PmlI CACGTG 1 cut(s) 2770
PpsI GAGTC 2 cut(s) 1300, 3063
Ppu21I YACGTR 2 cut(s) 1424, 2770
PpuMI RGGWCCY 3 cut(s) 398, 410, 641
PshAI GACNNNNGTC 1 cut(s) 3054
PshBI ATTAAT 1 cut(s) 2573
Psp5II RGGWCCY 3 cut(s) 398, 410, 641
Psp6I CCWGG 7 cut(s) 319, 406, 721, 790, 1260, 2115, 2182
PspCI CACGTG 1 cut(s) 2770
PspEI GGTNACC 1 cut(s) 2212
PspFI CCCAGC 4 cut(s) 115, 247, 610, 896
PspGI CCWGG 7 cut(s) 319, 406, 721, 790, 1260, 2115, 2182
PspPPI RGGWCCY 3 cut(s) 398, 410, 641
PstI CTGCAG 3 cut(s) 1096, 1501, 1590
PsuI RGATCY 2 cut(s) 1096, 3010
PvuI CGATCG 1 cut(s) 221
PvuII CAGCTG 5 cut(s) 1439, 1496, 1835, 1868, 2024
RsaI GTAC 7 cut(s) 150, 886, 1422, 1445, 1735, 2442, 2678
RsaNI GTAC 7 cut(s) 149, 885, 1421, 1444, 1734, 2441, 2677
RseI CAYNNNNRTG 5 cut(s) 745, 1161, 2285, 2339, 2772
SacII CCGCGG 1 cut(s) 576
SalI GTCGAC 1 cut(s) 1922
SapI GCTCTTC 1 cut(s) 1810
SaqAI TTAA 8 cut(s) 51, 1103, 1728, 1880, 2219, 2573, 2816, 2990
ScaI AGTACT 1 cut(s) 1735
SchI GAGTC 2 cut(s) 1300, 3064
SduI GDGCHC 3 cut(s) 1070, 1513, 1792
SfaNI GCATC 9 cut(s) 401, 948, 1107, 1202, 1345, 1536, 1781, 2088, 2099
SfcI CTRYAG 4 cut(s) 1092, 1497, 1586, 2906
SfoI GGCGCC 1 cut(s) 2966
Sfr274I CTCGAG 1 cut(s) 2795
Sfr303I CCGCGG 1 cut(s) 576
SgrBI CCGCGG 1 cut(s) 576
SlaI CTCGAG 1 cut(s) 2795
SmiMI CAYNNNNRTG 5 cut(s) 745, 1161, 2285, 2339, 2772
SmlI CTYRAG 2 cut(s) 2079, 2795
SmoI CTYRAG 2 cut(s) 2079, 2795
SpeI ACTAGT 1 cut(s) 2671
SphI GCATGC 2 cut(s) 424, 709
SseBI AGGCCT 2 cut(s) 1369, 2077
SspDI GGCGCC 1 cut(s) 2964
SspMI CTAG 5 cut(s) 87, 810, 1800, 2672, 2760
StuI AGGCCT 2 cut(s) 1369, 2077
StyI CCWWGG 1 cut(s) 2140
TaaI ACNGT 8 cut(s) 482, 649, 1390, 1673, 2195, 2287, 2506, 2813
TaiI ACGT 7 cut(s) 1057, 1112, 1351, 1426, 2161, 2772, 3078
TatI WGTACW 2 cut(s) 1443, 1733
TauI GCSGC 7 cut(s) 280, 427, 575, 712, 1623, 1703, 2408
TfiI GAWTC 9 cut(s) 17, 46, 139, 1685, 2708, 2729, 2749, 2840, 2868
Tru1I TTAA 8 cut(s) 51, 1103, 1728, 1880, 2219, 2573, 2816, 2990
Tru9I TTAA 8 cut(s) 51, 1103, 1728, 1880, 2219, 2573, 2816, 2990
TscAI CASTG 9 cut(s) 520, 759, 1042, 1096, 1328, 1513, 1770, 2270, 2547
TseFI GTSAC 6 cut(s) 1313, 2068, 2195, 2212, 2452, 2774
Tsp45I GTSAC 6 cut(s) 1313, 2068, 2195, 2212, 2452, 2774
TspGWI ACGGA 3 cut(s) 2183, 2314, 2348
TspRI CASTG 9 cut(s) 520, 759, 1042, 1096, 1328, 1513, 1770, 2270, 2547
Van91I CCANNNNNTGG 5 cut(s) 374, 473, 539, 1183, 1630
VneI GTGCAC 2 cut(s) 1066, 1509
VspI ATTAAT 1 cut(s) 2573
XagI CCTNNNNNAGG 1 cut(s) 405
XceI RCATGY 4 cut(s) 424, 709, 2391, 3095
XcmI CCANNNNNNNNNTGG 2 cut(s) 1328, 3059
XhoI CTCGAG 1 cut(s) 2795
XmiI GTMKAC 2 cut(s) 1345, 1923
XmnI GAANNNNTTC 1 cut(s) 1650
XspI CTAG 5 cut(s) 87, 810, 1800, 2672, 2760
ZrmI AGTACT 1 cut(s) 1735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.