NO-associated protein 1, chloroplastic
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0342431 RchiOBHm_Chr4g0430961 RchiOBHm_Chr6g0270281 |
| rosa_laevigata | RLG00000006605 RLG00000009811 RLG00000011435 RLG00000012946 RLG00000027978 RLG00000028043 RLG00000036035 |
| rosa_multiflora | Rmu_sc0008074.1_g000004 Rmu_sc0028314.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00011520 Rroxscaffold_2G00108900 Rroxscaffold_2G00132280 Rroxscaffold_5G00336480 |
| rosa_rugosa | Rorug01G0117200 Rorug02G0399300 Rorug03G0283100 Rorug06G0070200 Rorug06G0072400 |
| rosa_samantha | Rh1BG203600 Rh1CG231200 Rh2BG534400 Rh2BG534500 Rh2BG580200 Rh2CG319900 Rh2DG032100 Rh2DG116300 Rh2DG543400 Rh3AG332700 Rh3BG331800 Rh3CG283400 Rh3DG309000 Rh4CG117500 Rh4DG189000 Rh4DG250700 Rh4DG307700 Rh5AG172300 Rh5BG398000 Rh5CG338500 Rh5CG338600 Rh5DG345700 Rh6AG024800 Rh6CG162400 Rh7BG245400 Rh7BG447500 Rh7CG166700 Rh7DG256800 |
| rosa_wichuraiana | Rw1G004220 Rw4G018480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 26 |
| Acc65I | GGTACC | 1 cut(s) | 163 |
| AccB1I | GGYRCC | 1 cut(s) | 163 |
| AcuI | CTGAAG | 1 cut(s) | 134 |
| AfaI | GTAC | 1 cut(s) | 165 |
| AgsI | TTSAA | 1 cut(s) | 39 |
| AjnI | CCWGG | 1 cut(s) | 192 |
| Alw26I | GTCTC | 1 cut(s) | 59 |
| AoxI | GGCC | 1 cut(s) | 137 |
| Asp718I | GGTACC | 1 cut(s) | 163 |
| AspS9I | GGNCC | 2 cut(s) | 137, 205 |
| AvaII | GGWCC | 1 cut(s) | 205 |
| BanI | GGYRCC | 1 cut(s) | 163 |
| BbsI | GAAGAC | 1 cut(s) | 140 |
| BccI | CCATC | 1 cut(s) | 90 |
| BciT130I | CCWGG | 1 cut(s) | 194 |
| BcoDI | GTCTC | 1 cut(s) | 59 |
| Bme1390I | CCNGG | 1 cut(s) | 194 |
| Bme18I | GGWCC | 1 cut(s) | 205 |
| BmgT120I | GGNCC | 2 cut(s) | 137, 205 |
| BmiI | GGNNCC | 2 cut(s) | 165, 207 |
| BmrFI | CCNGG | 1 cut(s) | 194 |
| BmsI | GCATC | 1 cut(s) | 172 |
| BpiI | GAAGAC | 1 cut(s) | 140 |
| Bse1I | ACTGG | 1 cut(s) | 73 |
| BseBI | CCWGG | 1 cut(s) | 194 |
| BseNI | ACTGG | 1 cut(s) | 73 |
| BshFI | GGCC | 1 cut(s) | 139 |
| BshNI | GGYRCC | 1 cut(s) | 163 |
| BslFI | GGGAC | 1 cut(s) | 191 |
| BsmAI | GTCTC | 1 cut(s) | 59 |
| BsmFI | GGGAC | 1 cut(s) | 191 |
| BsnI | GGCC | 1 cut(s) | 139 |
| BspANI | GGCC | 1 cut(s) | 139 |
| BspLI | GGNNCC | 2 cut(s) | 165, 207 |
| BspT107I | GGYRCC | 1 cut(s) | 163 |
| BsrI | ACTGG | 1 cut(s) | 73 |
| Bst2UI | CCWGG | 1 cut(s) | 194 |
| Bst4CI | ACNGT | 1 cut(s) | 106 |
| BstMAI | GTCTC | 1 cut(s) | 59 |
| BstNI | CCWGG | 1 cut(s) | 194 |
| BstSCI | CCNGG | 1 cut(s) | 192 |
| BstV2I | GAAGAC | 1 cut(s) | 140 |
| BsuRI | GGCC | 1 cut(s) | 139 |
| BtsI | GCAGTG | 1 cut(s) | 94 |
| BtsIMutI | CAGTG | 3 cut(s) | 80, 94, 168 |
| Cfr13I | GGNCC | 2 cut(s) | 137, 205 |
| CsiI | ACCWGGT | 1 cut(s) | 192 |
| Csp6I | GTAC | 1 cut(s) | 164 |
| CviJI | RGCY | 2 cut(s) | 72, 139 |
| CviKI_1 | RGCY | 2 cut(s) | 72, 139 |
| CviQI | GTAC | 1 cut(s) | 164 |
| Eco47I | GGWCC | 1 cut(s) | 205 |
| Eco57I | CTGAAG | 1 cut(s) | 134 |
| EcoO109I | RGGNCCY | 1 cut(s) | 205 |
| EcoRII | CCWGG | 1 cut(s) | 192 |
| EcoT22I | ATGCAT | 1 cut(s) | 187 |
| FaiI | YATR | 6 cut(s) | 26, 51, 135, 159, 161, 222 |
| FaqI | GGGAC | 1 cut(s) | 191 |
| FauNDI | CATATG | 1 cut(s) | 159 |
| HaeIII | GGCC | 1 cut(s) | 139 |
| HinfI | GANTC | 2 cut(s) | 145, 154 |
| Hpy188I | TCNGA | 2 cut(s) | 153, 230 |
| HpyCH4III | ACNGT | 1 cut(s) | 106 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 87, 185 |
| KpnI | GGTACC | 1 cut(s) | 167 |
| LpnPI | CCDG | 4 cut(s) | 86, 126, 179, 206 |
| LweI | GCATC | 1 cut(s) | 172 |
| MabI | ACCWGGT | 1 cut(s) | 192 |
| MaeIII | GTNAC | 1 cut(s) | 89 |
| MboII | GAAGA | 1 cut(s) | 140 |
| MluCI | AATT | 1 cut(s) | 58 |
| MlyI | GAGTC | 1 cut(s) | 154 |
| MnlI | CCTC | 2 cut(s) | 119, 169 |
| Mph1103I | ATGCAT | 1 cut(s) | 187 |
| MseI | TTAA | 1 cut(s) | 125 |
| MspR9I | CCNGG | 1 cut(s) | 194 |
| MvaI | CCWGG | 1 cut(s) | 194 |
| NdeI | CATATG | 1 cut(s) | 159 |
| NlaIV | GGNNCC | 2 cut(s) | 165, 207 |
| NmuCI | GTSAC | 1 cut(s) | 89 |
| NsiI | ATGCAT | 1 cut(s) | 187 |
| PfeI | GAWTC | 1 cut(s) | 154 |
| PleI | GAGTC | 1 cut(s) | 153 |
| PpsI | GAGTC | 1 cut(s) | 153 |
| PpuMI | RGGWCCY | 1 cut(s) | 205 |
| PsiI | TTATAA | 1 cut(s) | 26 |
| Psp5II | RGGWCCY | 1 cut(s) | 205 |
| Psp6I | CCWGG | 1 cut(s) | 192 |
| PspGI | CCWGG | 1 cut(s) | 192 |
| PspN4I | GGNNCC | 2 cut(s) | 165, 207 |
| PspPI | GGNCC | 2 cut(s) | 137, 205 |
| PspPPI | RGGWCCY | 1 cut(s) | 205 |
| RsaI | GTAC | 1 cut(s) | 165 |
| RsaNI | GTAC | 1 cut(s) | 164 |
| SaqAI | TTAA | 1 cut(s) | 125 |
| Sau96I | GGNCC | 2 cut(s) | 137, 205 |
| SchI | GAGTC | 1 cut(s) | 154 |
| ScrFI | CCNGG | 1 cut(s) | 194 |
| SetI | ASST | 4 cut(s) | 56, 124, 198, 207 |
| SexAI | ACCWGGT | 1 cut(s) | 192 |
| SfaNI | GCATC | 1 cut(s) | 172 |
| SgeI | CNNG | 7 cut(s) | 81, 85, 125, 205, 206, 214, 224 |
| SinI | GGWCC | 1 cut(s) | 205 |
| SmlI | CTYRAG | 1 cut(s) | 212 |
| SmoI | CTYRAG | 1 cut(s) | 212 |
| Sse9I | AATT | 1 cut(s) | 58 |
| StyD4I | CCNGG | 1 cut(s) | 192 |
| TaaI | ACNGT | 1 cut(s) | 106 |
| TasI | AATT | 1 cut(s) | 58 |
| TfiI | GAWTC | 1 cut(s) | 154 |
| Tru1I | TTAA | 1 cut(s) | 125 |
| Tru9I | TTAA | 1 cut(s) | 125 |
| TscAI | CASTG | 3 cut(s) | 80, 94, 175 |
| TseFI | GTSAC | 1 cut(s) | 89 |
| Tsp45I | GTSAC | 1 cut(s) | 89 |
| TspDTI | ATGAA | 1 cut(s) | 146 |
| TspRI | CASTG | 3 cut(s) | 80, 94, 175 |
| VpaK11BI | GGWCC | 1 cut(s) | 205 |
| Zsp2I | ATGCAT | 1 cut(s) | 187 |