Transcriptional activator that binds specific DNA sequence
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0342431 RchiOBHm_Chr4g0430961 RchiOBHm_Chr6g0270281 |
| rosa_laevigata | RLG00000006605 RLG00000009811 RLG00000011435 RLG00000012946 RLG00000027978 RLG00000028043 RLG00000036035 |
| rosa_multiflora | Rmu_sc0008074.1_g000004 Rmu_sc0028314.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00011520 Rroxscaffold_2G00108900 Rroxscaffold_2G00132280 Rroxscaffold_5G00336480 |
| rosa_rugosa | Rorug01G0117200 Rorug02G0399300 Rorug03G0283100 Rorug06G0070200 Rorug06G0072400 |
| rosa_samantha | Rh1BG203600 Rh1CG231200 Rh2BG534400 Rh2BG534500 Rh2BG580200 Rh2CG319900 Rh2DG032100 Rh2DG116300 Rh2DG543400 Rh3AG332700 Rh3BG331800 Rh3CG283400 Rh3DG309000 Rh4CG117500 Rh4DG189000 Rh4DG250700 Rh4DG307700 Rh5AG172300 Rh5BG398000 Rh5CG338500 Rh5CG338600 Rh5DG345700 Rh6AG024800 Rh6CG162400 Rh7BG245400 Rh7BG447500 Rh7CG166700 Rh7DG256800 |
| rosa_wichuraiana | Rw1G004220 Rw4G018480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 87 |
| AluBI | AGCT | 3 cut(s) | 45, 212, 229 |
| AluI | AGCT | 3 cut(s) | 45, 212, 229 |
| Alw26I | GTCTC | 2 cut(s) | 65, 253 |
| Ama87I | CYCGRG | 1 cut(s) | 170 |
| ApeKI | GCWGC | 1 cut(s) | 42 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 21, 53 |
| AseI | ATTAAT | 1 cut(s) | 137 |
| AvaI | CYCGRG | 1 cut(s) | 170 |
| BbvI | GCAGC | 1 cut(s) | 54 |
| BccI | CCATC | 2 cut(s) | 58, 104 |
| BclI | TGATCA | 1 cut(s) | 121 |
| BcoDI | GTCTC | 2 cut(s) | 65, 253 |
| BfaI | CTAG | 2 cut(s) | 198, 213 |
| BfmI | CTRYAG | 1 cut(s) | 144 |
| BisI | GCNGC | 1 cut(s) | 43 |
| BlsI | GCNGC | 1 cut(s) | 44 |
| BmeT110I | CYCGRG | 1 cut(s) | 170 |
| BmsI | GCATC | 3 cut(s) | 81, 257, 262 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 259, 291 |
| Bse1I | ACTGG | 1 cut(s) | 111 |
| BseGI | GGATG | 3 cut(s) | 96, 115, 277 |
| BseMII | CTCAG | 1 cut(s) | 227 |
| BseNI | ACTGG | 1 cut(s) | 111 |
| BseXI | GCAGC | 1 cut(s) | 54 |
| BsiHKCI | CYCGRG | 1 cut(s) | 170 |
| BsmAI | GTCTC | 2 cut(s) | 65, 253 |
| BsoBI | CYCGRG | 1 cut(s) | 170 |
| Bsp143I | GATC | 1 cut(s) | 121 |
| BspCNI | CTCAG | 1 cut(s) | 228 |
| BspHI | TCATGA | 1 cut(s) | 177 |
| BspMAI | CTGCAG | 1 cut(s) | 148 |
| BsrI | ACTGG | 1 cut(s) | 111 |
| BssMI | GATC | 1 cut(s) | 121 |
| Bst6I | CTCTTC | 1 cut(s) | 260 |
| BstDEI | CTNAG | 1 cut(s) | 236 |
| BstF5I | GGATG | 3 cut(s) | 96, 115, 277 |
| BstKTI | GATC | 1 cut(s) | 124 |
| BstMAI | GTCTC | 2 cut(s) | 65, 253 |
| BstMBI | GATC | 1 cut(s) | 121 |
| BstSFI | CTRYAG | 1 cut(s) | 144 |
| BstV1I | GCAGC | 1 cut(s) | 54 |
| BtsCI | GGATG | 3 cut(s) | 96, 115, 277 |
| CciI | TCATGA | 1 cut(s) | 177 |
| CviAII | CATG | 2 cut(s) | 178, 297 |
| CviJI | RGCY | 6 cut(s) | 22, 45, 192, 212, 229, 235 |
| CviKI_1 | RGCY | 6 cut(s) | 22, 45, 192, 212, 229, 235 |
| DdeI | CTNAG | 1 cut(s) | 236 |
| DpnI | GATC | 1 cut(s) | 123 |
| DpnII | GATC | 1 cut(s) | 121 |
| Eam1104I | CTCTTC | 1 cut(s) | 260 |
| EarI | CTCTTC | 1 cut(s) | 260 |
| Eco88I | CYCGRG | 1 cut(s) | 170 |
| FaeI | CATG | 2 cut(s) | 181, 300 |
| FaiI | YATR | 4 cut(s) | 80, 179, 232, 298 |
| FatI | CATG | 2 cut(s) | 177, 296 |
| FbaI | TGATCA | 1 cut(s) | 121 |
| Fnu4HI | GCNGC | 1 cut(s) | 43 |
| FokI | GGATG | 3 cut(s) | 103, 122, 284 |
| Fsp4HI | GCNGC | 1 cut(s) | 43 |
| FspBI | CTAG | 2 cut(s) | 198, 213 |
| GluI | GCNGC | 1 cut(s) | 43 |
| Hin1II | CATG | 2 cut(s) | 181, 300 |
| HinfI | GANTC | 2 cut(s) | 5, 165 |
| Hpy166II | GTNNAC | 1 cut(s) | 104 |
| Hpy188III | TCNNGA | 2 cut(s) | 26, 178 |
| Hpy8I | GTNNAC | 1 cut(s) | 104 |
| HpyCH4IV | ACGT | 1 cut(s) | 207 |
| HpyCH4V | TGCA | 3 cut(s) | 94, 146, 223 |
| HpyF3I | CTNAG | 1 cut(s) | 236 |
| HpySE526I | ACGT | 1 cut(s) | 207 |
| Hsp92II | CATG | 2 cut(s) | 181, 300 |
| Ksp22I | TGATCA | 1 cut(s) | 121 |
| Kzo9I | GATC | 1 cut(s) | 121 |
| LmnI | GCTCC | 1 cut(s) | 226 |
| LpnPI | CCDG | 3 cut(s) | 92, 174, 209 |
| Lsp1109I | GCAGC | 1 cut(s) | 54 |
| LweI | GCATC | 3 cut(s) | 81, 257, 262 |
| MaeI | CTAG | 2 cut(s) | 198, 213 |
| MaeII | ACGT | 1 cut(s) | 207 |
| MalI | GATC | 1 cut(s) | 123 |
| MboI | GATC | 1 cut(s) | 121 |
| MboII | GAAGA | 1 cut(s) | 277 |
| MluCI | AATT | 2 cut(s) | 81, 138 |
| MnlI | CCTC | 4 cut(s) | 33, 142, 179, 261 |
| MseI | TTAA | 3 cut(s) | 69, 137, 328 |
| MslI | CAYNNNNRTG | 1 cut(s) | 182 |
| NdeII | GATC | 1 cut(s) | 121 |
| NlaIII | CATG | 2 cut(s) | 181, 300 |
| PaeR7I | CTCGAG | 1 cut(s) | 170 |
| PagI | TCATGA | 1 cut(s) | 177 |
| PfeI | GAWTC | 2 cut(s) | 5, 165 |
| PkrI | GCNGC | 1 cut(s) | 44 |
| PshBI | ATTAAT | 1 cut(s) | 137 |
| PspXI | VCTCGAGB | 1 cut(s) | 170 |
| PstI | CTGCAG | 1 cut(s) | 148 |
| RseI | CAYNNNNRTG | 1 cut(s) | 182 |
| SaqAI | TTAA | 3 cut(s) | 69, 137, 328 |
| SatI | GCNGC | 1 cut(s) | 43 |
| Sau3AI | GATC | 1 cut(s) | 121 |
| SetI | ASST | 6 cut(s) | 47, 76, 153, 210, 214, 231 |
| SfaNI | GCATC | 3 cut(s) | 81, 257, 262 |
| SfcI | CTRYAG | 1 cut(s) | 144 |
| Sfr274I | CTCGAG | 1 cut(s) | 170 |
| SlaI | CTCGAG | 1 cut(s) | 170 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 182 |
| SmlI | CTYRAG | 1 cut(s) | 170 |
| SmoI | CTYRAG | 1 cut(s) | 170 |
| Sse9I | AATT | 2 cut(s) | 81, 138 |
| SspMI | CTAG | 2 cut(s) | 198, 213 |
| TaiI | ACGT | 1 cut(s) | 210 |
| TaqI | TCGA | 1 cut(s) | 171 |
| TasI | AATT | 2 cut(s) | 81, 138 |
| TfiI | GAWTC | 2 cut(s) | 5, 165 |
| Tru1I | TTAA | 3 cut(s) | 69, 137, 328 |
| Tru9I | TTAA | 3 cut(s) | 69, 137, 328 |
| TseI | GCWGC | 1 cut(s) | 42 |
| TspDTI | ATGAA | 3 cut(s) | 166, 194, 285 |
| VspI | ATTAAT | 1 cut(s) | 137 |
| XhoI | CTCGAG | 1 cut(s) | 170 |
| XspI | CTAG | 2 cut(s) | 198, 213 |