Rorug06G0070200

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000575
Physical Location & Seq
Forward (+)
9340049 .. 9370089
30041 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0070200.1

Sequence Viewer

Length: 2022 bp
ATGATTGAACACCTTGTCCATCTTGATCTTTCCAACAATTTCTTCAATGGGTCTCTGCCTAAAACCATTCTCAACGCCTTTGAACTTCAGGTGCTTTCTCTCTCAAACAATGTCATCTCCGGTGAGCTTCCTGAGTCCATCGGTGATCTCAAAAGCCTTCAGCTTCTCAACATTTCTGACAATGCTTTGGCCGGAAAAGTACCTCAAAATCTCACTTCTCTGCAAAACCTCACAGTAGTTTCTTTGAGAAGCAACTACTTCACTGGGAATGTCCCAACCAGGTTTAATTCCGTTGAGGTTTTAGATCTCTCTTCAAATCTACTCAATGGCTCTCTGCCTCTTGATTTTGGTGGAGACAATCTGCGGTACTTAAACATCTCTTACAACAAGATTTGGGGGAAAATACCACCAGAGTTTGCAAGGAATATTTCAGTGAATTCAACCATTGATCTCTCCTTCAACAACTTAACCGGAGCAATCCCGGATTCGCAAGCTTTGCTCAACCAGAAAACAGAGCAGTTTGCAGGAAATGGTGAGCTTTGTGGGAAACCGTTGAAGAATCTTTGCGCAATTCCTTCGACTCTGTCTACTCCACCGAATGTGACTTCATCTTCTCCGGCTATTGCAGCCATTCCCAAAACACTCGACTCACCAGAATCAAACCCTTCCGGCGCACCAAATAGTACTCAGAACAAAACCCAAACCGGGCTAAAACCGGTCACAATCACTGGAATAATAGTCGGAGACTTAGCCGGAATAGCCATCATTGGACTGGTCATCCTTTACGTCTACCAAGTCAGGAAGAAATCAAAGAACAACCCAACTTCCACTTCATCAGACCCAGAGAAGAAACCAGACATTGTCACTAAACTCGACCCAGCTGCAACAAAACCATCCTCATGGTCATGCCTCACCATCAAAGGCGAAGAGACCTCGGAAGCAACTAGCTCAGACAGCGACCACGACGAGAAGCCCAACCATGAAACAGGGGGTGTGCACAGTCAAAACAGCGAAAACTCTCAGAAGCGTGGTGTGCTTATAACCGTAGACGGCGAACCAGAGCTTGAGCTCGAGACGTTGCTGAAGGCATCGGCGTACGTATTGGGTGCAAGTGGTCCGAGCATTGTGTACAAGGCGGTGCTGGAAGACAAGACGGCGCTTGCGGTGAGGAGGATTGGAGAGAGTGTGGTGGAGAAGATGAGGGATTTCGAGAACCAAGTGAGGGCCATTGCGAAGATGAGGCACCCAAATTTGGTGAGAGTTCGTGGGTTTTATTGGGGAGAAGATGAGAAGCTTGTGATATATGACTATGTCTCCAATGGCAGCCTCGCCGGAACCATTAACAGAAAAGCAGGTTCATCTCCTTACCATCTGCCTCTAGAAGTTCGGTTGAAGATAGCGAAAGGCATTGCCCGGGGGCTAAGCTACATCCACGAGAAGAAAAACGTGCATGGAAATATAAAACCAAGCAACATTCTTCTAAACTCGGATTTCGACCCTGTAATCAGCGATTTCGGCCTTGACAAGCTAATGTTAGGCGGCATGATCAGTCAAAAAGGTAGCGGTTCTGCCCGAGGGTATTTCGGAAGCCTAAAGTCCGCGGGGGCTCGCGAAGGTATTAATGAAATGCTACCGCCTGTTGCCGGCAGCCCCATCGCGACATCCTCCTCCGCCGGAGGAGCATTGTCGCCTTATCATGCCCCGGAGTCCTTGAAGAACTTGAAGCCGAACCCCAAGTGGGACGTGTACTCTTTTGGCATAGTTTTGCTAGAGCTTCTCACGGGTAGGGTATTTACGGAAAGGGAGCTGGCGGACCAGTGGACCGCCGGTTCACTGATGGGGGAGAAGAACCGTGTTTTGGTAATGGTCGACGTGGCGATTAGGGCTGAGGTGGAGGGCAGGGAAGATGCCTTGCAGGCTTGTTTGAAGCTAGGGTTTAGTTGTGCTAGTTTTGTTCCGCAGAAAAGACCAACCATGAAAGAAGCCCTCCAGGTGCTAGAAAAAAGTATTTCTTCAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

673

Amino Acids

72.5

Weight (kDa)

6.82

Isoelectric Point (pI)

33.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 4 - 63 7.7e-06 Leucine rich repeat
LRR_14 PF23598 4 - 84 1.5e-08 Leucine-rich repeat region
Pkinase PF00069 368 - 511 3.5e-19 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 374 - 511 1.3e-19 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 564 - 664 2.8e-08 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1040
Acc16I TGCGCA 1 cut(s) 568
Acc36I ACCTGC 1 cut(s) 1343
AccB1I GGYRCC 1 cut(s) 1242
AccI GTMKAC 4 cut(s) 587, 789, 1047, 1869
AccII CGCG 3 cut(s) 1601, 1611, 1658
AcoI YGGCCR 1 cut(s) 189
AcsI RAATTY 2 cut(s) 436, 1249
AcuI CTGAAG 3 cut(s) 71, 143, 1103
AfaI GTAC 6 cut(s) 201, 368, 685, 1097, 1130, 1748
AfiI CCNNNNNNNGG 6 cut(s) 705, 1222, 1252, 1643, 1738, 1858
AflIII ACRYGT 1 cut(s) 1743
AgeI ACCGGT 1 cut(s) 715
AjiI CACGTC 2 cut(s) 1744, 1873
AjnI CCWGG 2 cut(s) 278, 1989
AjuI GAANNNNNNNTTGG 6 cut(s) 26, 58, 814, 846, 1841, 1873
AloI GAACNNNNNNTCC 3 cut(s) 32, 1813, 1845
Alw21I GWGCWC 2 cut(s) 999, 1071
Alw26I GTCTC 6 cut(s) 57, 348, 738, 923, 1067, 1318
Alw44I GTGCAC 1 cut(s) 995
Ama87I CYCGRG 3 cut(s) 1070, 1413, 1572
AoxI GGCC 3 cut(s) 189, 1224, 1516
ApaLI GTGCAC 1 cut(s) 995
ApeKI GCWGC 4 cut(s) 626, 881, 1323, 1647
ApoI RAATTY 2 cut(s) 436, 1249
AseI ATTAAT 1 cut(s) 1620
AsiGI ACCGGT 1 cut(s) 715
AspLEI GCGC 3 cut(s) 569, 674, 1159
AspS9I GGNCC 4 cut(s) 1115, 1224, 1813, 1821
AsuC2I CCSGG 5 cut(s) 482, 706, 1414, 1415, 1703
AsuHPI GGTGA 7 cut(s) 134, 155, 545, 642, 904, 1177, 1267
AvaI CYCGRG 3 cut(s) 1070, 1413, 1572
AvaII GGWCC 3 cut(s) 1115, 1813, 1821
BaeGI GKGCMC 1 cut(s) 999
BanI GGYRCC 1 cut(s) 1242
BanII GRGCYC 2 cut(s) 1071, 1609
BauI CACGAG 1 cut(s) 1433
BbsI GAAGAC 1 cut(s) 1152
Bbv12I GWGCWC 2 cut(s) 999, 1071
BbvCI CCTCAGC 1 cut(s) 1887
BbvI GCAGC 4 cut(s) 638, 868, 1335, 1659
BccI CCATC 8 cut(s) 27, 146, 770, 901, 923, 1377, 1661, 1831
BceAI ACGGC 2 cut(s) 1066, 1170
BcgI CGANNNNNNTGC 6 cut(s) 558, 592, 863, 897, 1636, 1670
BciT130I CCWGG 2 cut(s) 280, 1991
BclI TGATCA 1 cut(s) 1545
BcnI CCSGG 5 cut(s) 482, 706, 1414, 1415, 1703
BcoDI GTCTC 6 cut(s) 57, 348, 738, 923, 1067, 1318
BfaI CTAG 6 cut(s) 945, 1379, 1769, 1931, 1947, 1997
BfoI RGCGCY 1 cut(s) 1160
BfuAI ACCTGC 1 cut(s) 1343
BglI GCCNNNNNGGC 1 cut(s) 1916
BglII AGATCT 1 cut(s) 304
BisI GCNGC 5 cut(s) 627, 882, 1324, 1540, 1648
BlpI GCTNAGC 1 cut(s) 1421
BlsI GCNGC 5 cut(s) 628, 883, 1325, 1541, 1649
BmcAI AGTACT 1 cut(s) 685
Bme1390I CCNGG 7 cut(s) 280, 482, 706, 1414, 1415, 1703, 1991
Bme18I GGWCC 3 cut(s) 1115, 1813, 1821
BmeT110I CYCGRG 3 cut(s) 1070, 1413, 1572
BmgBI CACGTC 2 cut(s) 1744, 1873
BmgT120I GGNCC 4 cut(s) 1115, 1224, 1813, 1821
BmiI GGNNCC 2 cut(s) 1244, 1336
BmrFI CCNGG 7 cut(s) 280, 482, 706, 1414, 1415, 1703, 1991
BmrI ACTGGG 1 cut(s) 273
BmsI GCATC 2 cut(s) 1097, 1897
BmuI ACTGGG 1 cut(s) 273
BpiI GAAGAC 1 cut(s) 1152
BpmI CTGGAG 1 cut(s) 1973
Bpu10I CCTNAGC 1 cut(s) 1887
Bpu1102I GCTNAGC 1 cut(s) 1421
BpuEI CTTGAG 1 cut(s) 1085
BpuMI CCSGG 5 cut(s) 482, 706, 1414, 1415, 1703
BsaAI YACGTR 1 cut(s) 1099
BsaI GGTCTC 2 cut(s) 57, 923
BsaJI CCNNGG 6 cut(s) 933, 1413, 1414, 1573, 1599, 1701
BsaWI WCCGGW 3 cut(s) 119, 470, 715
BsaXI ACNNNNNCTCC 4 cut(s) 1170, 1200, 1298, 1328
Bsc4I CCNNNNNNNGG 6 cut(s) 705, 1222, 1252, 1643, 1738, 1858
Bse118I RCCGGY 3 cut(s) 715, 1643, 1826
Bse1I ACTGG 4 cut(s) 268, 733, 777, 1816
Bse3DI GCAATG 2 cut(s) 1227, 1407
BseBI CCWGG 2 cut(s) 280, 1991
BseDI CCNNGG 6 cut(s) 933, 1413, 1414, 1573, 1599, 1701
BseGI GGATG 4 cut(s) 777, 893, 1428, 1661
BseLI CCNNNNNNNGG 6 cut(s) 705, 1222, 1252, 1643, 1738, 1858
BseMI GCAATG 2 cut(s) 1227, 1407
BseMII CTCAG 5 cut(s) 123, 701, 963, 1034, 1878
BseNI ACTGG 4 cut(s) 268, 733, 777, 1816
BseRI GAGGAG 3 cut(s) 1183, 1657, 1692
BseSI GKGCMC 1 cut(s) 999
BseXI GCAGC 4 cut(s) 638, 868, 1335, 1659
BseYI CCCAGC 1 cut(s) 877
Bsh1236I CGCG 3 cut(s) 1601, 1611, 1658
BshFI GGCC 3 cut(s) 191, 1226, 1518
BshNI GGYRCC 1 cut(s) 1242
BshTI ACCGGT 1 cut(s) 715
BsiHKAI GWGCWC 2 cut(s) 999, 1071
BsiHKCI CYCGRG 3 cut(s) 1070, 1413, 1572
BsiWI CGTACG 1 cut(s) 1095
BslFI GGGAC 2 cut(s) 257, 1754
BslI CCNNNNNNNGG 6 cut(s) 705, 1222, 1252, 1643, 1738, 1858
BsmAI GTCTC 6 cut(s) 57, 348, 738, 923, 1067, 1318
BsmBI CGTCTC 1 cut(s) 1067
BsmFI GGGAC 2 cut(s) 257, 1754
BsnI GGCC 3 cut(s) 191, 1226, 1518
Bso31I GGTCTC 2 cut(s) 57, 923
BsoBI CYCGRG 3 cut(s) 1070, 1413, 1572
Bsp1286I GDGCHC 3 cut(s) 999, 1071, 1609
Bsp1407I TGTACA 1 cut(s) 1128
Bsp143I GATC 5 cut(s) 25, 145, 304, 448, 1545
Bsp1720I GCTNAGC 1 cut(s) 1421
Bsp68I TCGCGA 2 cut(s) 1611, 1658
BspANI GGCC 3 cut(s) 191, 1226, 1518
BspCNI CTCAG 5 cut(s) 124, 700, 962, 1033, 1879
BspFNI CGCG 3 cut(s) 1601, 1611, 1658
BspLI GGNNCC 2 cut(s) 1244, 1336
BspMI ACCTGC 1 cut(s) 1343
BspT107I GGYRCC 1 cut(s) 1242
BspTNI GGTCTC 2 cut(s) 57, 923
BsrDI GCAATG 2 cut(s) 1227, 1407
BsrFI RCCGGY 3 cut(s) 715, 1643, 1826
BsrGI TGTACA 1 cut(s) 1128
BsrI ACTGG 4 cut(s) 268, 733, 777, 1816
BssAI RCCGGY 3 cut(s) 715, 1643, 1826
BssECI CCNNGG 6 cut(s) 933, 1413, 1414, 1573, 1599, 1701
BssMI GATC 5 cut(s) 25, 145, 304, 448, 1545
BssSI CACGAG 1 cut(s) 1433
Bst2BI CACGAG 1 cut(s) 1433
Bst2UI CCWGG 2 cut(s) 280, 1991
Bst4CI ACNGT 5 cut(s) 235, 552, 1001, 1045, 1853
Bst6I CTCTTC 2 cut(s) 316, 921
BstAPI GCANNNNNTGC 1 cut(s) 496
BstAUI TGTACA 1 cut(s) 1128
BstBAI YACGTR 1 cut(s) 1099
BstC8I GCNNGC 6 cut(s) 492, 1161, 1609, 1645, 1809, 1917
BstDEI CTNAG 7 cut(s) 132, 687, 748, 949, 1020, 1421, 1887
BstDSI CCRYGG 1 cut(s) 1599
BstF5I GGATG 4 cut(s) 777, 893, 1428, 1661
BstFNI CGCG 3 cut(s) 1601, 1611, 1658
BstH2I RGCGCY 1 cut(s) 1160
BstHHI GCGC 3 cut(s) 569, 674, 1159
BstKTI GATC 5 cut(s) 28, 148, 307, 451, 1548
BstMAI GTCTC 6 cut(s) 57, 348, 738, 923, 1067, 1318
BstMBI GATC 5 cut(s) 25, 145, 304, 448, 1545
BstMWI GCNNNNNNNGC 9 cut(s) 496, 626, 758, 954, 1033, 1515, 1679, 1883, 1916
BstNI CCWGG 2 cut(s) 280, 1991
BstSCI CCNGG 7 cut(s) 278, 480, 704, 1412, 1413, 1701, 1989
BstSLI GKGCMC 1 cut(s) 999
BstSNI TACGTA 1 cut(s) 1099
BstUI CGCG 3 cut(s) 1601, 1611, 1658
BstV1I GCAGC 4 cut(s) 638, 868, 1335, 1659
BstV2I GAAGAC 1 cut(s) 1152
BstX2I RGATCY 1 cut(s) 304
BstXI CCANNNNNNTGG 1 cut(s) 900
BstYI RGATCY 1 cut(s) 304
BsuRI GGCC 3 cut(s) 191, 1226, 1518
BtgI CCRYGG 1 cut(s) 1599
BtgZI GCGATG 1 cut(s) 1639
BtrI CACGTC 2 cut(s) 1744, 1873
BtsCI GGATG 4 cut(s) 777, 893, 1428, 1661
BtsIMutI CAGTG 5 cut(s) 261, 438, 726, 1823, 1832
BtuMI TCGCGA 2 cut(s) 1611, 1658
BveI ACCTGC 1 cut(s) 1343
Cac8I GCNNGC 6 cut(s) 492, 1161, 1609, 1645, 1809, 1917
CfoI GCGC 3 cut(s) 569, 674, 1159
Cfr10I RCCGGY 3 cut(s) 715, 1643, 1826
Cfr13I GGNCC 4 cut(s) 1115, 1224, 1813, 1821
Cfr42I CCGCGG 1 cut(s) 1602
Cfr9I CCCGGG 1 cut(s) 1413
CsiI ACCWGGT 1 cut(s) 278
Csp6I GTAC 6 cut(s) 200, 367, 684, 1096, 1129, 1747
CspAI ACCGGT 1 cut(s) 715
CviAII CATG 7 cut(s) 900, 906, 980, 1451, 1543, 1697, 1975
CviQI GTAC 6 cut(s) 200, 367, 684, 1096, 1129, 1747
DdeI CTNAG 7 cut(s) 132, 687, 748, 949, 1020, 1421, 1887
DpnI GATC 5 cut(s) 27, 147, 306, 450, 1547
DpnII GATC 5 cut(s) 25, 145, 304, 448, 1545
EaeI YGGCCR 1 cut(s) 189
Eam1104I CTCTTC 2 cut(s) 316, 921
EarI CTCTTC 2 cut(s) 316, 921
EciI GGCGGA 2 cut(s) 1660, 1826
Ecl136II GAGCTC 1 cut(s) 1069
Eco105I TACGTA 1 cut(s) 1099
Eco24I GRGCYC 2 cut(s) 1071, 1609
Eco31I GGTCTC 2 cut(s) 57, 923
Eco47I GGWCC 3 cut(s) 1115, 1813, 1821
Eco53kI GAGCTC 1 cut(s) 1069
Eco57I CTGAAG 3 cut(s) 71, 143, 1103
Eco88I CYCGRG 3 cut(s) 1070, 1413, 1572
EcoICRI GAGCTC 1 cut(s) 1069
EcoRI GAATTC 1 cut(s) 436
EcoRII CCWGG 2 cut(s) 278, 1989
EcoT38I GRGCYC 2 cut(s) 1071, 1609
Esp3I CGTCTC 1 cut(s) 1067
FaeI CATG 7 cut(s) 903, 909, 983, 1454, 1546, 1700, 1978
FalI AAGNNNNNCTT 1 cut(s) 1996
FaqI GGGAC 2 cut(s) 257, 1754
FatI CATG 7 cut(s) 899, 905, 979, 1450, 1542, 1696, 1974
FauI CCCGC 1 cut(s) 1594
FbaI TGATCA 1 cut(s) 1545
FblI GTMKAC 4 cut(s) 587, 789, 1047, 1869
Fnu4HI GCNGC 5 cut(s) 627, 882, 1324, 1540, 1648
FokI GGATG 4 cut(s) 764, 880, 1415, 1648
FriOI GRGCYC 2 cut(s) 1071, 1609
Fsp4HI GCNGC 5 cut(s) 627, 882, 1324, 1540, 1648
FspBI CTAG 6 cut(s) 945, 1379, 1769, 1931, 1947, 1997
FspI TGCGCA 1 cut(s) 568
GlaI GCGC 3 cut(s) 568, 673, 1158
GluI GCNGC 5 cut(s) 627, 882, 1324, 1540, 1648
GsaI CCCAGC 1 cut(s) 881
GsuI CTGGAG 1 cut(s) 1973
HaeII RGCGCY 1 cut(s) 1160
HaeIII GGCC 3 cut(s) 191, 1226, 1518
HhaI GCGC 3 cut(s) 569, 674, 1159
Hin1II CATG 7 cut(s) 903, 909, 983, 1454, 1546, 1700, 1978
Hin6I GCGC 3 cut(s) 567, 672, 1157
HinP1I GCGC 3 cut(s) 567, 672, 1157
HincII GTYRAC 1 cut(s) 1870
HindII GTYRAC 1 cut(s) 1870
HindIII AAGCTT 2 cut(s) 492, 1292
HinfI GANTC 7 cut(s) 134, 485, 559, 580, 647, 656, 1706
HphI GGTGA 7 cut(s) 134, 155, 545, 642, 904, 1177, 1267
Hpy166II GTNNAC 9 cut(s) 588, 790, 997, 1048, 1129, 1747, 1821, 1832, 1870
Hpy188III TCNNGA 9 cut(s) 23, 131, 341, 799, 1072, 1210, 1379, 1610, 1657
Hpy8I GTNNAC 9 cut(s) 588, 790, 997, 1048, 1129, 1747, 1821, 1832, 1870
Hpy99I CGWCG 2 cut(s) 968, 1874
HpyAV CCTTC 6 cut(s) 167, 466, 585, 675, 1078, 1607
HpyCH4III ACNGT 5 cut(s) 235, 552, 1001, 1045, 1853
HpyCH4IV ACGT 6 cut(s) 786, 1076, 1098, 1446, 1743, 1872
HpyCH4V TGCA 9 cut(s) 223, 419, 524, 626, 884, 997, 1109, 1450, 1915
HpyF10VI GCNNNNNNNGC 9 cut(s) 496, 626, 758, 954, 1033, 1515, 1679, 1883, 1916
HpyF3I CTNAG 7 cut(s) 132, 687, 748, 949, 1020, 1421, 1887
HpySE526I ACGT 6 cut(s) 786, 1076, 1098, 1446, 1743, 1872
Hsp92II CATG 7 cut(s) 903, 909, 983, 1454, 1546, 1700, 1978
HspAI GCGC 3 cut(s) 567, 672, 1157
KroI GCCGGC 1 cut(s) 1643
KroNI GCCGGC 1 cut(s) 1645
Ksp22I TGATCA 1 cut(s) 1545
KspI CCGCGG 1 cut(s) 1602
Kzo9I GATC 5 cut(s) 25, 145, 304, 448, 1545
LmnI GCTCC 3 cut(s) 473, 1679, 1804
Lsp1109I GCAGC 4 cut(s) 638, 868, 1335, 1659
LweI GCATC 2 cut(s) 1097, 1897
MabI ACCWGGT 1 cut(s) 278
MaeI CTAG 6 cut(s) 945, 1379, 1769, 1931, 1947, 1997
MaeII ACGT 6 cut(s) 786, 1076, 1098, 1446, 1743, 1872
MaeIII GTNAC 3 cut(s) 601, 718, 862
MalI GATC 5 cut(s) 27, 147, 306, 450, 1547
MboI GATC 5 cut(s) 25, 145, 304, 448, 1545
MflI RGATCY 1 cut(s) 304
MhlI GDGCHC 3 cut(s) 999, 1071, 1609
MluCI AATT 5 cut(s) 37, 286, 436, 570, 1249
MlyI GAGTC 4 cut(s) 143, 574, 641, 1715
MmeI TCCRAC 2 cut(s) 57, 721
MroNI GCCGGC 1 cut(s) 1643
MseI TTAA 5 cut(s) 285, 371, 467, 1341, 1620
MslI CAYNNNNRTG 2 cut(s) 898, 904
MspA1I CMGCKG 2 cut(s) 881, 1601
MspR9I CCNGG 7 cut(s) 280, 482, 706, 1414, 1415, 1703, 1991
MvaI CCWGG 2 cut(s) 280, 1991
MvnI CGCG 3 cut(s) 1601, 1611, 1658
MwoI GCNNNNNNNGC 9 cut(s) 496, 626, 758, 954, 1033, 1515, 1679, 1883, 1916
NaeI GCCGGC 1 cut(s) 1645
NciI CCSGG 5 cut(s) 482, 706, 1414, 1415, 1703
NdeII GATC 5 cut(s) 25, 145, 304, 448, 1545
NgoMIV GCCGGC 1 cut(s) 1643
NlaIII CATG 7 cut(s) 903, 909, 983, 1454, 1546, 1700, 1978
NlaIV GGNNCC 2 cut(s) 1244, 1336
NmuCI GTSAC 3 cut(s) 601, 718, 862
NruI TCGCGA 2 cut(s) 1611, 1658
NsbI TGCGCA 1 cut(s) 568
PaeR7I CTCGAG 1 cut(s) 1070
PdiI GCCGGC 1 cut(s) 1645
PfeI GAWTC 3 cut(s) 485, 559, 656
Pfl23II CGTACG 1 cut(s) 1095
PflFI GACNNNGTC 3 cut(s) 583, 860, 1310
PfoI TCCNGGA 1 cut(s) 480
PinAI ACCGGT 1 cut(s) 715
PkrI GCNGC 5 cut(s) 628, 883, 1325, 1541, 1649
PleI GAGTC 4 cut(s) 142, 574, 641, 1714
PpsI GAGTC 4 cut(s) 142, 574, 641, 1714
Ppu21I YACGTR 1 cut(s) 1099
PshBI ATTAAT 1 cut(s) 1620
PsiI TTATAA 1 cut(s) 1040
Psp124BI GAGCTC 1 cut(s) 1071
Psp6I CCWGG 2 cut(s) 278, 1989
PspFI CCCAGC 1 cut(s) 877
PspGI CCWGG 2 cut(s) 278, 1989
PspLI CGTACG 1 cut(s) 1095
PspN4I GGNNCC 2 cut(s) 1244, 1336
PspPI GGNCC 4 cut(s) 1115, 1224, 1813, 1821
PsuI RGATCY 1 cut(s) 304
PsyI GACNNNGTC 3 cut(s) 583, 860, 1310
PvuII CAGCTG 1 cut(s) 881
RruI TCGCGA 2 cut(s) 1611, 1658
RsaI GTAC 6 cut(s) 201, 368, 685, 1097, 1130, 1748
RsaNI GTAC 6 cut(s) 200, 367, 684, 1096, 1129, 1747
RseI CAYNNNNRTG 2 cut(s) 898, 904
SacI GAGCTC 1 cut(s) 1071
SacII CCGCGG 1 cut(s) 1602
SalI GTCGAC 1 cut(s) 1868
SaqAI TTAA 5 cut(s) 285, 371, 467, 1341, 1620
SatI GCNGC 5 cut(s) 627, 882, 1324, 1540, 1648
Sau3AI GATC 5 cut(s) 25, 145, 304, 448, 1545
Sau96I GGNCC 4 cut(s) 1115, 1224, 1813, 1821
ScaI AGTACT 1 cut(s) 685
SchI GAGTC 4 cut(s) 143, 574, 641, 1715
ScrFI CCNGG 7 cut(s) 280, 482, 706, 1414, 1415, 1703, 1991
SduI GDGCHC 3 cut(s) 999, 1071, 1609
SexAI ACCWGGT 1 cut(s) 278
SfaNI GCATC 2 cut(s) 1097, 1897
Sfr274I CTCGAG 1 cut(s) 1070
Sfr303I CCGCGG 1 cut(s) 1602
SgrBI CCGCGG 1 cut(s) 1602
SinI GGWCC 3 cut(s) 1115, 1813, 1821
SlaI CTCGAG 1 cut(s) 1070
SmaI CCCGGG 1 cut(s) 1415
SmiMI CAYNNNNRTG 2 cut(s) 898, 904
SmlI CTYRAG 2 cut(s) 1064, 1070
SmoI CTYRAG 2 cut(s) 1064, 1070
SnaBI TACGTA 1 cut(s) 1099
Sse9I AATT 5 cut(s) 37, 286, 436, 570, 1249
SspI AATATT 1 cut(s) 427
SspMI CTAG 6 cut(s) 945, 1379, 1769, 1931, 1947, 1997
SstI GAGCTC 1 cut(s) 1071
StyD4I CCNGG 7 cut(s) 278, 480, 704, 1412, 1413, 1701, 1989
TaaI ACNGT 5 cut(s) 235, 552, 1001, 1045, 1853
TaiI ACGT 6 cut(s) 789, 1079, 1101, 1449, 1746, 1875
TaqI TCGA 7 cut(s) 578, 645, 873, 1071, 1209, 1494, 1869
TasI AATT 5 cut(s) 37, 286, 436, 570, 1249
TatI WGTACW 3 cut(s) 683, 1128, 1746
TauI GCSGC 1 cut(s) 1542
TfiI GAWTC 3 cut(s) 485, 559, 656
Tru1I TTAA 5 cut(s) 285, 371, 467, 1341, 1620
Tru9I TTAA 5 cut(s) 285, 371, 467, 1341, 1620
TscAI CASTG 5 cut(s) 268, 438, 733, 1823, 1839
TseFI GTSAC 3 cut(s) 601, 718, 862
TseI GCWGC 4 cut(s) 626, 881, 1323, 1647
Tsp45I GTSAC 3 cut(s) 601, 718, 862
TspDTI ATGAA 6 cut(s) 597, 822, 996, 1347, 1638, 1991
TspGWI ACGGA 2 cut(s) 280, 1811
TspMI CCCGGG 1 cut(s) 1413
TspRI CASTG 5 cut(s) 268, 438, 733, 1823, 1839
Tth111I GACNNNGTC 3 cut(s) 583, 860, 1310
VneI GTGCAC 1 cut(s) 995
VpaK11BI GGWCC 3 cut(s) 1115, 1813, 1821
VspI ATTAAT 1 cut(s) 1620
XapI RAATTY 2 cut(s) 436, 1249
XbaI TCTAGA 1 cut(s) 1378
XcmI CCANNNNNNNNNTGG 1 cut(s) 769
XhoI CTCGAG 1 cut(s) 1070
XmaI CCCGGG 1 cut(s) 1413
XmiI GTMKAC 4 cut(s) 587, 789, 1047, 1869
XspI CTAG 6 cut(s) 945, 1379, 1769, 1931, 1947, 1997
ZrmI AGTACT 1 cut(s) 685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.