Rorug06G0038300

Belongs to the argonaute family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000546
Physical Location & Seq
Reverse (-)
4785796 .. 4790770
4975 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0038300.1

Sequence Viewer

Length: 1497 bp
ATGGACCCTGAACAAAACATAGAGCATACATTGCTTCGTCACATAAGACCGTATCAGATTACTTTCAAAATCAGAGTTCGTGCATCCAGACTTTGGAGACCGAAAAAGTATAACAGTGACATATACGATGGCCTCCATTATCTGTTAGTCGACGAAGAGGGACATGCTATTCATGGTTTAATTGAGGAATCTGCTTATCCTTACATGTCCAACAAAATGGAAGAAGGACAGGTGTATGACATTACCAATTTCTATAACCGAAAACCTATATCAAAATATAAAGTTGCTGATCACGTGGTAGAACTGTGTTTCAATGCCTTAACAAAGTTTGAGCCTGTAATGGATGCATTCCCTCCAATCCCAGAACATTCATTTAACTTCCTTCATTTTGACAACTTGGAGGACCAGATGAAGACTCAGACAGTACTTAAGGATGTTTATGGCTGTATCAAATCACTCATACCAGAACATCAAGTTACTGTTAAAGACACTGGAAAATTGGTATCAAAATGTGAAATCTTTATAGAAAATTTGAGGAGGGAGGATATCAGAATTACCTTCTGGGGTGACATAGCTAGAGAGTTTGATATGGAAAGAGTTAAACAGTTATCCCCACCAGTGCTCGCTGTATTCACGGGTTTAAGGTTGACCAAATTCCAAGAACGGGTAACAGCAGCAACAACAGGCCATACATGCATCATCATCAATCCAGATATTCCAATAGCAAATGAATACAAAGCCGAGTTCTCGAAAGCAGGCGACAAAGTGAAAATACTTCCTGTACCTTTCAAACGGCCAACAGCAGAAGAGATGAAAGACAGAACAACAAAGTCGGTCTTTGAATTAAACACATTGGATCCAGATATATACATGAATAAAACAGTGTGTTCCACTGCTTCGATCCTCCGGTTTCCAGTTCACAATGGTTGGTGGTATAGAGGCTGTTCAAAGTGTTCTCAACAACTGAAGCAAAGAGAAGACACCAGTGAATTAATTTGTCCTAAACATGATGTGCAAATAGCTGTGCCATGTTACAAAGTTTATGTCACCATTCGAGATGATAATAATCAAGCAACACTCATTCTGATGGGGAGACAGGCAGAGCAGCTGTTTGGCATCAATTGTCAAGATCTGGTTAACAAAAGACTGTATCCAACAGAGCAGACACTACCAGAAGAGATTAAGAAGACAATTGATGAAACCTATCTCTTTGAAATCACAGTCAATCAATACCGCGAGCTGATGGTCACAAACATTTTCCCAAGTAAGCAATCCTTCGGATCAATGGTGGAACAAACCCCAACCACTGTAACACCGGAGTGGCTTCCAACTGAAAGAAAAAGAGACATTGAAGCAAGTGGAAAAGCTTTGTGCATCGTGGAGTCTGAGAAAAAAGCCAAGAATGAGAAGGAGACCAAGCGTGGAGCAATAATATCGGCATCATCAGTGTCATCATCAGCAAGCATAGAACAACTTCAGAAAGAAAAGGCAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000785 GO:0000790 GO:0000791 GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003682 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005719 GO:0005730 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0008213 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009814 GO:0009816 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0015030 GO:0016032 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016604 GO:0016787 GO:0016788 GO:0018022 GO:0018193 GO:0018205 GO:0019048 GO:0019219 GO:0019222 GO:0019538 GO:0030422 GO:0031047 GO:0031048 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0034641 GO:0034968 GO:0035194 GO:0035197 GO:0035198 GO:0035821 GO:0036211 GO:0040029 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043412 GO:0043414 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044728 GO:0045087 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051567 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0060255 GO:0061647 GO:0061980 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0070919 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0080188 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098542 GO:0140098 GO:1901360 GO:1901363 GO:1901564 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

498

Amino Acids

57.5

Weight (kDa)

6.5

Isoelectric Point (pI)

48.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF223 PF02721 9 - 110 1.8e-11 Domain of unknown function DUF223
REPA_OB_2 PF16900 133 - 228 2.6e-08 Replication protein A OB domain
Rep_fac-A_C PF08646 306 - 410 1.7e-06 Replication factor-A C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000546)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700
malus_domestica MD14G1049300.v1.1
rosa_chinensis RchiOBHm_Chr4g0433201 RchiOBHm_Chr6g0255111 RchiOBHm_Chr7g0235301 RchiOBHm_Chr7g0235351 RchiOBHm_Chr7g0235361 RchiOBHm_Chr7g0235381
rosa_laevigata RLG00000001164 RLG00000013941
rosa_multiflora Rmu_co8331033.1_g000001 Rmu_co8369635.1_g000001 Rmu_sc0000957.1_g000010 Rmu_sc0003304.1_g000033 Rmu_sc0003304.1_g000041 Rmu_sc0003488.1_g000001 Rmu_sc0004529.1_g000036 Rmu_sc0004637.1_g000013 Rmu_sc0004657.1_g000070 Rmu_sc0004657.1_g000076 Rmu_sc0006578.1_g000004 Rmu_sc0011027.1_g000008 Rmu_sc0011027.1_g000010 Rmu_sc0013813.1_g000001 Rmu_sc0014112.1_g000001 Rmu_sc0014112.1_g000002 Rmu_sc0014112.1_g000004 Rmu_ssc0000011.1_g000040 Rmu_ssc0000295.1_g000011
rosa_roxburghii Rroxscaffold_2G00103040 Rroxscaffold_3G00226100 Rroxscaffold_3G00226120 Rroxscaffold_5G00374710 Rroxscaffold_5G00374720 Rroxscaffold_7G00200160 Rroxscaffold_7G00200190
rosa_rugosa Rorug05G0474400 Rorug05G0474400 Rorug06G0037400 Rorug06G0037500 Rorug06G0037600 Rorug06G0038300 Rorug06G0038300 Rorug06G0038400 Rorug06G0038500 Rorug07G0289800 Rorug07G0289900 Rorug07G0290000 Rorug07G0290000
rosa_samantha Rh4AG320500 Rh4AG320700 Rh4AG321100 Rh4DG324200 Rh4DG324700 Rh6BG067500 Rh6CG066600 Rh6CG066700 Rh6DG063600 Rh6DG063700 Rh6DG147600 Rh7AG444800 Rh7AG445000 Rh7BG416700 Rh7BG416800 Rh7CG465200 Rh7CG465300 Rh7CG465700 Rh7DG433600 Rh7DG433800
rosa_wichuraiana Rw0G008730 Rw0G008770 Rw4G027830 Rw7G036940 Rw7G036980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 93
AccI GTMKAC 1 cut(s) 150
AccII CGCG 1 cut(s) 1236
AciI CCGC 1 cut(s) 1234
AclWI GGATC 4 cut(s) 851, 864, 895, 1288
AcoI YGGCCR 1 cut(s) 794
AcsI RAATTY 2 cut(s) 529, 653
AcuI CTGAAG 2 cut(s) 986, 1460
AcvI CACGTG 1 cut(s) 295
AfaI GTAC 2 cut(s) 426, 783
AfiI CCNNNNNNNGG 2 cut(s) 93, 664
AflII CTTAAG 1 cut(s) 428
AflIII ACRYGT 1 cut(s) 204
AgsI TTSAA 7 cut(s) 67, 313, 790, 842, 948, 1214, 1352
AleI CACNNNNGTG 1 cut(s) 1318
AluBI AGCT 5 cut(s) 575, 1022, 1108, 1240, 1367
AluI AGCT 5 cut(s) 575, 1022, 1108, 1240, 1367
Alw21I GWGCWC 1 cut(s) 624
Alw26I GTCTC 4 cut(s) 91, 1087, 1338, 1406
AlwI GGATC 4 cut(s) 851, 864, 895, 1288
AoxI GGCC 3 cut(s) 130, 685, 794
ApeKI GCWGC 2 cut(s) 674, 1105
ApoI RAATTY 2 cut(s) 529, 653
ArsI GACNNNNNNTTYG 2 cut(s) 1029, 1061
AseI ATTAAT 1 cut(s) 992
Asp700I GAANNNNTTC 1 cut(s) 1473
AspS9I GGNCC 2 cut(s) 4, 403
AsuHPI GGTGA 2 cut(s) 578, 1039
AvaII GGWCC 2 cut(s) 4, 403
BamHI GGATCC 1 cut(s) 856
BbrPI CACGTG 1 cut(s) 295
BbsI GAAGAC 3 cut(s) 419, 984, 1193
Bbv12I GWGCWC 1 cut(s) 624
BbvI GCAGC 2 cut(s) 686, 1117
BccI CCATC 3 cut(s) 122, 1081, 1237
BceAI ACGGC 1 cut(s) 809
BcgI CGANNNNNNTGC 2 cut(s) 1416, 1450
BciVI GTATCC 1 cut(s) 1161
BclI TGATCA 1 cut(s) 289
BcoDI GTCTC 4 cut(s) 91, 1087, 1338, 1406
BfaI CTAG 1 cut(s) 576
BfrI CTTAAG 1 cut(s) 428
BfuI GTATCC 1 cut(s) 1161
BglII AGATCT 1 cut(s) 1129
BisI GCNGC 2 cut(s) 675, 1106
BlsI GCNGC 2 cut(s) 676, 1107
BmcAI AGTACT 1 cut(s) 426
Bme18I GGWCC 2 cut(s) 4, 403
BmgT120I GGNCC 2 cut(s) 4, 403
BmiI GGNNCC 2 cut(s) 6, 858
BmsI GCATC 6 cut(s) 92, 334, 705, 1125, 1383, 1448
BpiI GAAGAC 3 cut(s) 419, 984, 1193
BsaAI YACGTR 1 cut(s) 295
BsaBI GATNNNNATC 1 cut(s) 1065
BsaI GGTCTC 2 cut(s) 91, 1406
BsaWI WCCGGW 2 cut(s) 906, 1315
Bsc4I CCNNNNNNNGG 2 cut(s) 93, 664
Bse1I ACTGG 4 cut(s) 496, 617, 914, 984
Bse3DI GCAATG 1 cut(s) 29
Bse8I GATNNNNATC 1 cut(s) 1065
BseGI GGATG 3 cut(s) 83, 349, 439
BseJI GATNNNNATC 1 cut(s) 1065
BseLI CCNNNNNNNGG 2 cut(s) 93, 664
BseMI GCAATG 1 cut(s) 29
BseMII CTCAG 2 cut(s) 431, 1377
BseNI ACTGG 4 cut(s) 496, 617, 914, 984
BseRI GAGGAG 1 cut(s) 550
BseXI GCAGC 2 cut(s) 686, 1117
Bsh1236I CGCG 1 cut(s) 1236
BshFI GGCC 3 cut(s) 132, 687, 796
BsiHKAI GWGCWC 1 cut(s) 624
BsiSI CCGG 2 cut(s) 907, 1316
BslFI GGGAC 1 cut(s) 174
BslI CCNNNNNNNGG 2 cut(s) 93, 664
BsmAI GTCTC 4 cut(s) 91, 1087, 1338, 1406
BsmFI GGGAC 1 cut(s) 174
BsmI GAATGC 1 cut(s) 347
BsnI GGCC 3 cut(s) 132, 687, 796
Bso31I GGTCTC 2 cut(s) 91, 1406
Bsp1286I GDGCHC 1 cut(s) 624
Bsp143I GATC 5 cut(s) 289, 856, 900, 1129, 1280
BspACI CCGC 1 cut(s) 1234
BspANI GGCC 3 cut(s) 132, 687, 796
BspCNI CTCAG 2 cut(s) 430, 1378
BspFNI CGCG 1 cut(s) 1236
BspLI GGNNCC 2 cut(s) 6, 858
BspPI GGATC 4 cut(s) 851, 864, 895, 1288
BspTI CTTAAG 1 cut(s) 428
BspTNI GGTCTC 2 cut(s) 91, 1406
BsrDI GCAATG 1 cut(s) 29
BsrI ACTGG 4 cut(s) 496, 617, 914, 984
BssMI GATC 5 cut(s) 289, 856, 900, 1129, 1280
Bst6I CTCTTC 3 cut(s) 150, 801, 1170
BstAFI CTTAAG 1 cut(s) 428
BstAPI GCANNNNNTGC 1 cut(s) 31
BstBAI YACGTR 1 cut(s) 295
BstC8I GCNNGC 4 cut(s) 624, 757, 1238, 1462
BstDEI CTNAG 2 cut(s) 417, 1386
BstF5I GGATG 3 cut(s) 83, 349, 439
BstFNI CGCG 1 cut(s) 1236
BstKTI GATC 5 cut(s) 292, 859, 903, 1132, 1283
BstMAI GTCTC 4 cut(s) 91, 1087, 1338, 1406
BstMBI GATC 5 cut(s) 289, 856, 900, 1129, 1280
BstMWI GCNNNNNNNGC 2 cut(s) 31, 693
BstNSI RCATGY 3 cut(s) 167, 208, 696
BstUI CGCG 1 cut(s) 1236
BstV1I GCAGC 2 cut(s) 686, 1117
BstV2I GAAGAC 3 cut(s) 419, 984, 1193
BstX2I RGATCY 2 cut(s) 856, 1129
BstXI CCANNNNNNTGG 1 cut(s) 217
BstYI RGATCY 2 cut(s) 856, 1129
BsuI GTATCC 1 cut(s) 1161
BsuRI GGCC 3 cut(s) 132, 687, 796
BtsCI GGATG 3 cut(s) 83, 349, 439
BtsI GCAGTG 1 cut(s) 891
BtsIMutI CAGTG 8 cut(s) 121, 489, 624, 888, 891, 991, 1305, 1452
Cac8I GCNNGC 4 cut(s) 624, 757, 1238, 1462
Cfr13I GGNCC 2 cut(s) 4, 403
Csp6I GTAC 2 cut(s) 425, 782
CviAII CATG 7 cut(s) 164, 173, 205, 693, 871, 1007, 1029
CviQI GTAC 2 cut(s) 425, 782
DdeI CTNAG 2 cut(s) 417, 1386
DpnI GATC 5 cut(s) 291, 858, 902, 1131, 1282
DpnII GATC 5 cut(s) 289, 856, 900, 1129, 1280
EaeI YGGCCR 1 cut(s) 794
Eam1104I CTCTTC 3 cut(s) 150, 801, 1170
EarI CTCTTC 3 cut(s) 150, 801, 1170
Eco31I GGTCTC 2 cut(s) 91, 1406
Eco32I GATATC 1 cut(s) 547
Eco47I GGWCC 2 cut(s) 4, 403
Eco57I CTGAAG 2 cut(s) 986, 1460
Eco72I CACGTG 1 cut(s) 295
EcoRV GATATC 1 cut(s) 547
EcoT22I ATGCAT 2 cut(s) 349, 698
FaeI CATG 7 cut(s) 167, 176, 208, 696, 874, 1010, 1032
FalI AAGNNNNNCTT 4 cut(s) 821, 853, 1259, 1291
FaqI GGGAC 1 cut(s) 174
FatI CATG 7 cut(s) 163, 172, 204, 692, 870, 1006, 1028
FbaI TGATCA 1 cut(s) 289
FblI GTMKAC 1 cut(s) 150
Fnu4HI GCNGC 2 cut(s) 675, 1106
FokI GGATG 3 cut(s) 70, 356, 446
Fsp4HI GCNGC 2 cut(s) 675, 1106
FspBI CTAG 1 cut(s) 576
GluI GCNGC 2 cut(s) 675, 1106
HaeIII GGCC 3 cut(s) 132, 687, 796
HapII CCGG 2 cut(s) 907, 1316
Hin1II CATG 7 cut(s) 167, 176, 208, 696, 874, 1010, 1032
HincII GTYRAC 3 cut(s) 151, 648, 1138
HindII GTYRAC 3 cut(s) 151, 648, 1138
HindIII AAGCTT 1 cut(s) 1365
HinfI GANTC 3 cut(s) 188, 415, 1382
HpaI GTTAAC 1 cut(s) 1138
HpaII CCGG 2 cut(s) 907, 1316
HphI GGTGA 2 cut(s) 578, 1039
Hpy166II GTNNAC 4 cut(s) 151, 648, 919, 1138
Hpy188I TCNGA 8 cut(s) 57, 74, 420, 551, 1086, 1280, 1387, 1479
Hpy188III TCNNGA 6 cut(s) 87, 710, 748, 860, 1055, 1127
Hpy8I GTNNAC 4 cut(s) 151, 648, 919, 1138
Hpy99I CGWCG 1 cut(s) 155
HpyAV CCTTC 5 cut(s) 218, 392, 568, 1285, 1402
HpyCH4IV ACGT 1 cut(s) 294
HpyCH4V TGCA 5 cut(s) 83, 347, 696, 1015, 1374
HpyF10VI GCNNNNNNNGC 2 cut(s) 31, 693
HpyF3I CTNAG 2 cut(s) 417, 1386
HpySE526I ACGT 1 cut(s) 294
Hsp92II CATG 7 cut(s) 167, 176, 208, 696, 874, 1010, 1032
Ksp22I TGATCA 1 cut(s) 289
KspAI GTTAAC 1 cut(s) 1138
Kzo9I GATC 5 cut(s) 289, 856, 900, 1129, 1280
LmnI GCTCC 1 cut(s) 1424
Lsp1109I GCAGC 2 cut(s) 686, 1117
LweI GCATC 6 cut(s) 92, 334, 705, 1125, 1383, 1448
MaeI CTAG 1 cut(s) 576
MaeII ACGT 1 cut(s) 294
MaeIII GTNAC 9 cut(s) 38, 116, 475, 566, 667, 1031, 1045, 1246, 1309
MalI GATC 5 cut(s) 291, 858, 902, 1131, 1282
MboI GATC 5 cut(s) 289, 856, 900, 1129, 1280
MboII GAAGA 7 cut(s) 167, 233, 424, 818, 989, 1187, 1198
MfeI CAATTG 2 cut(s) 1120, 1191
MflI RGATCY 2 cut(s) 856, 1129
MhlI GDGCHC 1 cut(s) 624
MlyI GAGTC 2 cut(s) 409, 1391
MmeI TCCRAC 3 cut(s) 234, 1178, 1352
Mph1103I ATGCAT 2 cut(s) 349, 698
MroXI GAANNNNTTC 1 cut(s) 1473
MslI CAYNNNNRTG 2 cut(s) 1085, 1318
MspA1I CMGCKG 1 cut(s) 1108
MspCI CTTAAG 1 cut(s) 428
MspI CCGG 2 cut(s) 907, 1316
MunI CAATTG 2 cut(s) 1120, 1191
Mva1269I GAATGC 1 cut(s) 347
MvnI CGCG 1 cut(s) 1236
MwoI GCNNNNNNNGC 2 cut(s) 31, 693
NdeII GATC 5 cut(s) 289, 856, 900, 1129, 1280
NlaIII CATG 7 cut(s) 167, 176, 208, 696, 874, 1010, 1032
NlaIV GGNNCC 2 cut(s) 6, 858
NmeAIII GCCGAG 1 cut(s) 766
NmuCI GTSAC 5 cut(s) 38, 116, 566, 1045, 1246
NsiI ATGCAT 2 cut(s) 349, 698
NspI RCATGY 3 cut(s) 167, 208, 696
OliI CACNNNNGTG 1 cut(s) 1318
PciI ACATGT 1 cut(s) 204
PctI GAATGC 1 cut(s) 347
PdmI GAANNNNTTC 1 cut(s) 1473
PfeI GAWTC 1 cut(s) 188
PflMI CCANNNNNTGG 1 cut(s) 93
PkrI GCNGC 2 cut(s) 676, 1107
PleI GAGTC 2 cut(s) 409, 1390
PmaCI CACGTG 1 cut(s) 295
PmlI CACGTG 1 cut(s) 295
PpsI GAGTC 2 cut(s) 409, 1390
Ppu21I YACGTR 1 cut(s) 295
PscI ACATGT 1 cut(s) 204
PshBI ATTAAT 1 cut(s) 992
PspCI CACGTG 1 cut(s) 295
PspN4I GGNNCC 2 cut(s) 6, 858
PspPI GGNCC 2 cut(s) 4, 403
PsuI RGATCY 2 cut(s) 856, 1129
PvuII CAGCTG 1 cut(s) 1108
RsaI GTAC 2 cut(s) 426, 783
RsaNI GTAC 2 cut(s) 425, 782
RseI CAYNNNNRTG 2 cut(s) 1085, 1318
SalI GTCGAC 1 cut(s) 149
SatI GCNGC 2 cut(s) 675, 1106
Sau3AI GATC 5 cut(s) 289, 856, 900, 1129, 1280
Sau96I GGNCC 2 cut(s) 4, 403
ScaI AGTACT 1 cut(s) 426
SchI GAGTC 2 cut(s) 409, 1391
SduI GDGCHC 1 cut(s) 624
SfaNI GCATC 6 cut(s) 92, 334, 705, 1125, 1383, 1448
SinI GGWCC 2 cut(s) 4, 403
SmiMI CAYNNNNRTG 2 cut(s) 1085, 1318
SmlI CTYRAG 1 cut(s) 428
SmoI CTYRAG 1 cut(s) 428
SsiI CCGC 1 cut(s) 1234
SspMI CTAG 1 cut(s) 576
TaiI ACGT 1 cut(s) 297
TaqI TCGA 4 cut(s) 150, 749, 899, 1054
TaqII GACCGA 2 cut(s) 115, 823
TatI WGTACW 1 cut(s) 424
TfiI GAWTC 1 cut(s) 188
TscAI CASTG 8 cut(s) 121, 496, 624, 888, 898, 991, 1312, 1452
TseFI GTSAC 5 cut(s) 38, 116, 566, 1045, 1246
TseI GCWGC 2 cut(s) 674, 1105
Tsp45I GTSAC 5 cut(s) 38, 116, 566, 1045, 1246
TspDTI ATGAA 8 cut(s) 161, 360, 374, 425, 744, 827, 887, 1212
TspRI CASTG 8 cut(s) 121, 496, 624, 888, 898, 991, 1312, 1452
Van91I CCANNNNNTGG 1 cut(s) 93
Vha464I CTTAAG 1 cut(s) 428
VpaK11BI GGWCC 2 cut(s) 4, 403
VspI ATTAAT 1 cut(s) 992
XapI RAATTY 2 cut(s) 529, 653
XceI RCATGY 3 cut(s) 167, 208, 696
XmiI GTMKAC 1 cut(s) 150
XmnI GAANNNNTTC 1 cut(s) 1473
XspI CTAG 1 cut(s) 576
ZrmI AGTACT 1 cut(s) 426
Zsp2I ATGCAT 2 cut(s) 349, 698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.