Rmu_ssc0000295.1_g000011

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000295.1
OG0000546
Physical Location & Seq
Reverse (-)
38860 .. 42145
3286 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000295.1_g000011.1.cds

Sequence Viewer

Length: 1965 bp
atgacagaccagttggccttagcacgggtcggagctgtggctgcagaagcccgaacctatacccggatctcaactgaatattcatcctctttgtcagcagcacctgccccatctctgccacagcttccagcctttaattctaggacaatggaaccccaggatatgccatcaaaagtgctccacagtgtgctgctttacgggtcaaaacccctttatagcgcacttcctgcaaatgaaattccagagtggttcagcactaaatctaccagcactcccatatcaatcccaacaggggataacaagtggaagggagttgccgcatgtgctgttttctcagtccagggacatacgcctgcagatcttgacttttctaattactcgtatctaatcatactggaaaccgatgttgcgagcctggaaccatatgtgattaactgggaagaacaactccgcccccttggatcaagttctgatcttcttttaatttcctatgagcctagattgaagtttccaaagcgggcgttaaatcaatcaactgtggtgagggccatatttgaaaccaacaacccatacatggtggtccggaaatgtgggattcgtctagtctatgagcaagatgctggatggtttagtatcaacatatgccctggggtggagtcgatctatctgaataaagatgatgacgacgctgtactggagtctggctggcttagtcaagtggataaatgtctcaaatgggagaaattcattccacccttggaagaagactccacatttgggatgagaatgaacattcagtctgttctgccaagataccttgaggcattaaaccattgttccacagtgtataaatttaacatcacaggaagcccagcgtggtttaagcacttatttcgctttatcgataaattgccagctatatgctgggcttcttggccaatcaacatacctcagaatctaaacaagagtaagaagtggatgggatttgcaatatacgcatcaattgcagaggaactggggcatataatagaagacaaagatggcaaatatcgtgtttattttagattcgatatggggtgtaaatgtcatacgactgtgtcccaagaacttcagcaagtcaagtcgtcagaaaaacatgatcaacttttggttgtttacataccgcgggcacaaattgccgatgtgttgctcacacagacatcaacaaatgcaatgcacatttccttcaggatcgatagcccttgtgtaaagtttcaaagttgtgggtttcgtattgtgtaccaggaagatatacaagggtttgctgagacaattatccggtgcatgcagagggaagatgctctagagtttcacgataaattggtggtagaaaattggatagagttgataaggtgtaatccaaaagaacgggattccagaaccagacggcaaaaagagtttgaatggctctctcaaaaacatagaagtttagcagatctttcaaatccaggaataatgaagaaaattgtgttgaagttggacttgtacgaggagaagtccaagaagaaagccatgagggcagtctcagggctcgaagttgcaatggaggtcaatgggaaatctgtggtagcagcacctgctaatgttatttttctgtcgacaattttgggacgggatgggtcaatgtctgttcataagtgtgactggaagtgtcagaatgagcatgtctgtgggaatatgtatcactgcaagctgactggactcactcacatctgtgacaagaattgcaaccagaggattctgtatgataaccatagctctctttgccgggcaagcgggaaggttttcccccttacaccagtagagaaacaggcactgagaggggtccggaggaagcttgagtcagaggcccctgctgctgcagacaattgttcctttaaaggcagacaggatgaacagctccatccttcactactgccagtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

654

Amino Acids

74.1

Weight (kDa)

8.12

Isoelectric Point (pI)

46.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000546)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700
malus_domestica MD14G1049300.v1.1
rosa_chinensis RchiOBHm_Chr4g0433201 RchiOBHm_Chr6g0255111 RchiOBHm_Chr7g0235301 RchiOBHm_Chr7g0235351 RchiOBHm_Chr7g0235361 RchiOBHm_Chr7g0235381
rosa_laevigata RLG00000001164 RLG00000013941
rosa_multiflora Rmu_co8331033.1_g000001 Rmu_co8369635.1_g000001 Rmu_sc0000957.1_g000010 Rmu_sc0003304.1_g000033 Rmu_sc0003304.1_g000041 Rmu_sc0003488.1_g000001 Rmu_sc0004529.1_g000036 Rmu_sc0004637.1_g000013 Rmu_sc0004657.1_g000070 Rmu_sc0004657.1_g000076 Rmu_sc0006578.1_g000004 Rmu_sc0011027.1_g000008 Rmu_sc0011027.1_g000010 Rmu_sc0013813.1_g000001 Rmu_sc0014112.1_g000001 Rmu_sc0014112.1_g000002 Rmu_sc0014112.1_g000004 Rmu_ssc0000011.1_g000040 Rmu_ssc0000295.1_g000011
rosa_roxburghii Rroxscaffold_2G00103040 Rroxscaffold_3G00226100 Rroxscaffold_3G00226120 Rroxscaffold_5G00374710 Rroxscaffold_5G00374720 Rroxscaffold_7G00200160 Rroxscaffold_7G00200190
rosa_rugosa Rorug05G0474400 Rorug05G0474400 Rorug06G0037400 Rorug06G0037500 Rorug06G0037600 Rorug06G0038300 Rorug06G0038300 Rorug06G0038400 Rorug06G0038500 Rorug07G0289800 Rorug07G0289900 Rorug07G0290000 Rorug07G0290000
rosa_samantha Rh4AG320500 Rh4AG320700 Rh4AG321100 Rh4DG324200 Rh4DG324700 Rh6BG067500 Rh6CG066600 Rh6CG066700 Rh6DG063600 Rh6DG063700 Rh6DG147600 Rh7AG444800 Rh7AG445000 Rh7BG416700 Rh7BG416800 Rh7CG465200 Rh7CG465300 Rh7CG465700 Rh7DG433600 Rh7DG433800
rosa_wichuraiana Rw0G008730 Rw0G008770 Rw4G027830 Rw7G036940 Rw7G036980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 112, 1624
Acc36I ACCTGC 2 cut(s) 112, 1624
AccI GTMKAC 1 cut(s) 1637
AccII CGCG 1 cut(s) 1165
AccIII TCCGGA 2 cut(s) 582, 1866
AciI CCGC 6 cut(s) 318, 451, 517, 1163, 1165, 1815
AclWI GGATC 3 cut(s) 74, 469, 1238
AcoI YGGCCR 1 cut(s) 935
AcsI RAATTY 3 cut(s) 237, 743, 851
AcuI CTGAAG 2 cut(s) 1094, 1210
AdeI CACNNNGTG 1 cut(s) 187
AfaI GTAC 3 cut(s) 693, 1280, 1526
AfiI CCNNNNNNNGG 6 cut(s) 24, 63, 292, 574, 652, 777
AgsI TTSAA 6 cut(s) 505, 557, 1256, 1442, 1482, 1513
AjnI CCWGG 6 cut(s) 156, 339, 414, 646, 1281, 1486
AleI CACNNNNGTG 1 cut(s) 1752
AluBI AGCT 7 cut(s) 35, 124, 917, 1732, 1797, 1876, 1939
AluI AGCT 7 cut(s) 35, 124, 917, 1732, 1797, 1876, 1939
Alw21I GWGCWC 1 cut(s) 180
Alw26I GTCTC 3 cut(s) 734, 1301, 1567
AlwI GGATC 3 cut(s) 74, 469, 1238
AlwNI CAGNNNCTG 3 cut(s) 104, 1616, 1855
Aor13HI TCCGGA 2 cut(s) 582, 1866
AoxI GGCC 4 cut(s) 15, 546, 935, 1887
ApeKI GCWGC 6 cut(s) 41, 98, 190, 1610, 1895, 1898
ApoI RAATTY 3 cut(s) 237, 743, 851
ArsI GACNNNNNNTTYG 2 cut(s) 758, 790
Asp700I GAANNNNTTC 1 cut(s) 1823
AspLEI GCGC 1 cut(s) 221
AspS9I GGNCC 4 cut(s) 546, 580, 1864, 1888
AsuC2I CCSGG 2 cut(s) 64, 1808
AsuHPI GGTGA 1 cut(s) 553
AvaII GGWCC 2 cut(s) 580, 1864
BaeGI GKGCMC 1 cut(s) 1171
BalI TGGCCA 1 cut(s) 937
BanII GRGCYC 1 cut(s) 1572
BbsI GAAGAC 2 cut(s) 771, 1038
Bbv12I GWGCWC 1 cut(s) 180
BbvI GCAGC 6 cut(s) 28, 110, 177, 1622, 1882, 1885
BccI CCATC 7 cut(s) 118, 175, 618, 973, 1034, 1649, 1950
BceAI ACGGC 1 cut(s) 1442
BcgI CGANNNNNNTGC 2 cut(s) 875, 909
BciT130I CCWGG 6 cut(s) 158, 341, 416, 648, 1283, 1488
BclI TGATCA 1 cut(s) 1138
BcnI CCSGG 2 cut(s) 64, 1808
BcoDI GTCTC 3 cut(s) 734, 1301, 1567
BfaI CTAG 4 cut(s) 141, 498, 602, 1343
BfmI CTRYAG 3 cut(s) 42, 354, 1899
BfuAI ACCTGC 2 cut(s) 112, 1624
BglI GCCNNNNNGGC 1 cut(s) 1556
BglII AGATCT 2 cut(s) 358, 1474
BisI GCNGC 7 cut(s) 42, 99, 191, 318, 1611, 1896, 1899
BlsI GCNGC 7 cut(s) 43, 100, 192, 319, 1612, 1897, 1900
Bme1390I CCNGG 8 cut(s) 64, 158, 341, 416, 648, 1283, 1488, 1808
Bme18I GGWCC 2 cut(s) 580, 1864
BmgT120I GGNCC 4 cut(s) 546, 580, 1864, 1888
BmiI GGNNCC 4 cut(s) 153, 420, 1865, 1890
BmrFI CCNGG 8 cut(s) 64, 158, 341, 416, 648, 1283, 1488, 1808
BmrI ACTGGG 2 cut(s) 445, 1025
BmsI GCATC 3 cut(s) 607, 1007, 1327
BmuI ACTGGG 2 cut(s) 445, 1025
BpiI GAAGAC 2 cut(s) 771, 1038
BpmI CTGGAG 1 cut(s) 716
Bpu10I CCTNAGC 1 cut(s) 19
BpuEI CTTGAG 2 cut(s) 839, 1898
BpuMI CCSGG 2 cut(s) 64, 1808
Bsa29I ATCGAT 2 cut(s) 903, 1233
BsaJI CCNNGG 7 cut(s) 156, 340, 457, 646, 647, 756, 1163
BsaWI WCCGGW 3 cut(s) 582, 1317, 1866
BsaXI ACNNNNNCTCC 2 cut(s) 256, 286
Bsc4I CCNNNNNNNGG 6 cut(s) 24, 63, 292, 574, 652, 777
Bse1I ACTGG 9 cut(s) 10, 399, 440, 699, 1020, 1688, 1741, 1838, 1958
Bse3DI GCAATG 2 cut(s) 1218, 1587
BseAI TCCGGA 2 cut(s) 582, 1866
BseBI CCWGG 6 cut(s) 158, 341, 416, 648, 1283, 1488
BseCI ATCGAT 2 cut(s) 903, 1233
BseDI CCNNGG 7 cut(s) 156, 340, 457, 646, 647, 756, 1163
BseGI GGATG 7 cut(s) 83, 629, 786, 984, 1660, 1936, 1942
BseLI CCNNNNNNNGG 6 cut(s) 24, 63, 292, 574, 652, 777
BseMI GCAATG 2 cut(s) 1218, 1587
BseMII CTCAG 5 cut(s) 348, 965, 1296, 1578, 1847
BseNI ACTGG 9 cut(s) 10, 399, 440, 699, 1020, 1688, 1741, 1838, 1958
BseRI GAGGAG 1 cut(s) 1544
BseSI GKGCMC 1 cut(s) 1171
BseXI GCAGC 6 cut(s) 28, 110, 177, 1622, 1882, 1885
BseYI CCCAGC 2 cut(s) 871, 924
Bsh1236I CGCG 1 cut(s) 1165
BshFI GGCC 4 cut(s) 17, 548, 937, 1889
BshVI ATCGAT 2 cut(s) 903, 1233
BsiHKAI GWGCWC 1 cut(s) 180
BsiSI CCGG 5 cut(s) 64, 583, 1318, 1807, 1867
BslFI GGGAC 3 cut(s) 357, 1084, 1662
BslI CCNNNNNNNGG 6 cut(s) 24, 63, 292, 574, 652, 777
BsmAI GTCTC 3 cut(s) 734, 1301, 1567
BsmFI GGGAC 3 cut(s) 357, 1084, 1662
BsnI GGCC 4 cut(s) 17, 548, 937, 1889
Bsp1286I GDGCHC 3 cut(s) 180, 1171, 1572
Bsp13I TCCGGA 2 cut(s) 582, 1866
Bsp143I GATC 8 cut(s) 66, 358, 461, 472, 660, 1138, 1230, 1474
BspACI CCGC 6 cut(s) 318, 451, 517, 1163, 1165, 1815
BspANI GGCC 4 cut(s) 17, 548, 937, 1889
BspCNI CTCAG 5 cut(s) 347, 964, 1297, 1577, 1848
BspDI ATCGAT 2 cut(s) 903, 1233
BspEI TCCGGA 2 cut(s) 582, 1866
BspFNI CGCG 1 cut(s) 1165
BspLI GGNNCC 4 cut(s) 153, 420, 1865, 1890
BspMAI CTGCAG 3 cut(s) 46, 358, 1903
BspMI ACCTGC 2 cut(s) 112, 1624
BspPI GGATC 3 cut(s) 74, 469, 1238
BsrDI GCAATG 2 cut(s) 1218, 1587
BsrI ACTGG 9 cut(s) 10, 399, 440, 699, 1020, 1688, 1741, 1838, 1958
BssECI CCNNGG 7 cut(s) 156, 340, 457, 646, 647, 756, 1163
BssMI GATC 8 cut(s) 66, 358, 461, 472, 660, 1138, 1230, 1474
BssT1I CCWWGG 2 cut(s) 457, 756
Bst2UI CCWGG 6 cut(s) 158, 341, 416, 648, 1283, 1488
Bst4CI ACNGT 4 cut(s) 185, 538, 844, 1096
BstAPI GCANNNNNTGC 5 cut(s) 104, 227, 1004, 1175, 1616
BstC8I GCNNGC 9 cut(s) 354, 412, 519, 707, 915, 1167, 1325, 1730, 1813
BstDEI CTNAG 7 cut(s) 19, 334, 710, 951, 1305, 1564, 1856
BstDSI CCRYGG 1 cut(s) 1163
BstF5I GGATG 7 cut(s) 83, 629, 786, 984, 1660, 1936, 1942
BstFNI CGCG 1 cut(s) 1165
BstHHI GCGC 1 cut(s) 221
BstKTI GATC 8 cut(s) 69, 361, 464, 475, 663, 1141, 1233, 1477
BstMAI GTCTC 3 cut(s) 734, 1301, 1567
BstMBI GATC 8 cut(s) 66, 358, 461, 472, 660, 1138, 1230, 1474
BstNI CCWGG 6 cut(s) 158, 341, 416, 648, 1283, 1488
BstNSI RCATGY 3 cut(s) 324, 1327, 1706
BstSCI CCNGG 8 cut(s) 62, 156, 339, 414, 646, 1281, 1486, 1806
BstSFI CTRYAG 3 cut(s) 42, 354, 1899
BstSLI GKGCMC 1 cut(s) 1171
BstUI CGCG 1 cut(s) 1165
BstV1I GCAGC 6 cut(s) 28, 110, 177, 1622, 1882, 1885
BstV2I GAAGAC 2 cut(s) 771, 1038
BstX2I RGATCY 3 cut(s) 66, 358, 1474
BstYI RGATCY 3 cut(s) 66, 358, 1474
Bsu15I ATCGAT 2 cut(s) 903, 1233
BsuRI GGCC 4 cut(s) 17, 548, 937, 1889
BsuTUI ATCGAT 2 cut(s) 903, 1233
BtgI CCRYGG 1 cut(s) 1163
BtsCI GGATG 7 cut(s) 83, 629, 786, 984, 1660, 1936, 1942
BtsI GCAGTG 1 cut(s) 1723
BtsIMutI CAGTG 4 cut(s) 190, 849, 1723, 1853
BveI ACCTGC 2 cut(s) 112, 1624
Cac8I GCNNGC 9 cut(s) 354, 412, 519, 707, 915, 1167, 1325, 1730, 1813
CaiI CAGNNNCTG 3 cut(s) 104, 1616, 1855
CfoI GCGC 1 cut(s) 221
Cfr13I GGNCC 4 cut(s) 546, 580, 1864, 1888
Cfr42I CCGCGG 1 cut(s) 1166
ClaI ATCGAT 2 cut(s) 903, 1233
CseI GACGC 1 cut(s) 695
Csp6I GTAC 3 cut(s) 692, 1279, 1525
CviAII CATG 6 cut(s) 321, 574, 1136, 1324, 1552, 1703
CviQI GTAC 3 cut(s) 692, 1279, 1525
DdeI CTNAG 7 cut(s) 19, 334, 710, 951, 1305, 1564, 1856
DpnI GATC 8 cut(s) 68, 360, 463, 474, 662, 1140, 1232, 1476
DpnII GATC 8 cut(s) 66, 358, 461, 472, 660, 1138, 1230, 1474
DraI TTTAAA 1 cut(s) 1918
DraIII CACNNNGTG 1 cut(s) 187
EaeI YGGCCR 1 cut(s) 935
EciI GGCGGA 1 cut(s) 440
Eco130I CCWWGG 2 cut(s) 457, 756
Eco24I GRGCYC 1 cut(s) 1572
Eco47I GGWCC 2 cut(s) 580, 1864
Eco57I CTGAAG 2 cut(s) 1094, 1210
EcoO109I RGGNCCY 1 cut(s) 1888
EcoRII CCWGG 6 cut(s) 156, 339, 414, 646, 1281, 1486
EcoT14I CCWWGG 2 cut(s) 457, 756
EcoT38I GRGCYC 1 cut(s) 1572
ErhI CCWWGG 2 cut(s) 457, 756
FaeI CATG 6 cut(s) 324, 577, 1139, 1327, 1555, 1706
FalI AAGNNNNNCTT 2 cut(s) 1505, 1537
FaqI GGGAC 3 cut(s) 357, 1084, 1662
FatI CATG 6 cut(s) 320, 573, 1135, 1323, 1551, 1702
FauI CCCGC 3 cut(s) 510, 1158, 1808
FauNDI CATATG 2 cut(s) 424, 641
FbaI TGATCA 1 cut(s) 1138
FblI GTMKAC 1 cut(s) 1637
Fnu4HI GCNGC 7 cut(s) 42, 99, 191, 318, 1611, 1896, 1899
FokI GGATG 7 cut(s) 70, 636, 793, 991, 1667, 1929, 1943
FriOI GRGCYC 1 cut(s) 1572
Fsp4HI GCNGC 7 cut(s) 42, 99, 191, 318, 1611, 1896, 1899
FspBI CTAG 4 cut(s) 141, 498, 602, 1343
GlaI GCGC 1 cut(s) 220
GluI GCNGC 7 cut(s) 42, 99, 191, 318, 1611, 1896, 1899
GsaI CCCAGC 2 cut(s) 875, 928
GsuI CTGGAG 1 cut(s) 716
HaeIII GGCC 4 cut(s) 17, 548, 937, 1889
HapII CCGG 5 cut(s) 64, 583, 1318, 1807, 1867
HgaI GACGC 1 cut(s) 695
HhaI GCGC 1 cut(s) 221
Hin1II CATG 6 cut(s) 324, 577, 1139, 1327, 1555, 1706
Hin6I GCGC 1 cut(s) 219
HinP1I GCGC 1 cut(s) 219
HincII GTYRAC 1 cut(s) 1638
HindII GTYRAC 1 cut(s) 1638
HindIII AAGCTT 1 cut(s) 1874
HpaII CCGG 5 cut(s) 64, 583, 1318, 1807, 1867
HphI GGTGA 1 cut(s) 553
Hpy166II GTNNAC 3 cut(s) 1156, 1279, 1638
Hpy188I TCNGA 8 cut(s) 32, 472, 669, 954, 1129, 1695, 1885, 1964
Hpy188III TCNNGA 8 cut(s) 242, 362, 583, 1228, 1343, 1352, 1416, 1867
Hpy8I GTNNAC 3 cut(s) 1156, 1279, 1638
Hpy99I CGWCG 1 cut(s) 689
HpyAV CCTTC 4 cut(s) 301, 1234, 1813, 1956
HpyCH4III ACNGT 4 cut(s) 185, 538, 844, 1096
HpyF3I CTNAG 7 cut(s) 19, 334, 710, 951, 1305, 1564, 1856
Hsp92II CATG 6 cut(s) 324, 577, 1139, 1327, 1555, 1706
HspAI GCGC 1 cut(s) 219
Kpn2I TCCGGA 2 cut(s) 582, 1866
Ksp22I TGATCA 1 cut(s) 1138
KspI CCGCGG 1 cut(s) 1166
Kzo9I GATC 8 cut(s) 66, 358, 461, 472, 660, 1138, 1230, 1474
LmnI GCTCC 3 cut(s) 32, 183, 1944
Lsp1109I GCAGC 6 cut(s) 28, 110, 177, 1622, 1882, 1885
LweI GCATC 3 cut(s) 607, 1007, 1327
MaeI CTAG 4 cut(s) 141, 498, 602, 1343
MaeIII GTNAC 2 cut(s) 1679, 1754
MalI GATC 8 cut(s) 68, 360, 463, 474, 662, 1140, 1232, 1476
MboI GATC 8 cut(s) 66, 358, 461, 472, 660, 1138, 1230, 1474
MboII GAAGA 9 cut(s) 452, 467, 773, 776, 1043, 1298, 1346, 1510, 1555
MfeI CAATTG 2 cut(s) 1002, 1906
MflI RGATCY 3 cut(s) 66, 358, 1474
MhlI GDGCHC 3 cut(s) 180, 1171, 1572
MlsI TGGCCA 1 cut(s) 937
MluNI TGGCCA 1 cut(s) 937
MlyI GAGTC 5 cut(s) 665, 707, 761, 1734, 1889
MmeI TCCRAC 2 cut(s) 10, 1497
Mox20I TGGCCA 1 cut(s) 937
MroI TCCGGA 2 cut(s) 582, 1866
MroXI GAANNNNTTC 1 cut(s) 1823
MscI TGGCCA 1 cut(s) 937
MseI TTAA 8 cut(s) 135, 432, 482, 524, 827, 855, 882, 1917
MslI CAYNNNNRTG 3 cut(s) 1677, 1707, 1752
Msp20I TGGCCA 1 cut(s) 937
MspA1I CMGCKG 1 cut(s) 1165
MspI CCGG 5 cut(s) 64, 583, 1318, 1807, 1867
MspR9I CCNGG 8 cut(s) 64, 158, 341, 416, 648, 1283, 1488, 1808
MunI CAATTG 2 cut(s) 1002, 1906
MvaI CCWGG 6 cut(s) 158, 341, 416, 648, 1283, 1488
MvnI CGCG 1 cut(s) 1165
NciI CCSGG 2 cut(s) 64, 1808
NdeI CATATG 2 cut(s) 424, 641
NdeII GATC 8 cut(s) 66, 358, 461, 472, 660, 1138, 1230, 1474
NlaIII CATG 6 cut(s) 324, 577, 1139, 1327, 1555, 1706
NlaIV GGNNCC 4 cut(s) 153, 420, 1865, 1890
NmuCI GTSAC 2 cut(s) 1679, 1754
NspI RCATGY 3 cut(s) 324, 1327, 1706
OliI CACNNNNGTG 1 cut(s) 1752
PaeI GCATGC 1 cut(s) 1327
PaqCI CACCTGC 2 cut(s) 112, 1624
PasI CCCWGGG 1 cut(s) 647
PdmI GAANNNNTTC 1 cut(s) 1823
PfeI GAWTC 5 cut(s) 595, 955, 1065, 1412, 1777
PflFI GACNNNGTC 1 cut(s) 1096
PfoI TCCNGGA 1 cut(s) 1486
PkrI GCNGC 7 cut(s) 43, 100, 192, 319, 1612, 1897, 1900
PleI GAGTC 5 cut(s) 664, 706, 761, 1734, 1888
PpsI GAGTC 5 cut(s) 664, 706, 761, 1734, 1888
Psp6I CCWGG 6 cut(s) 156, 339, 414, 646, 1281, 1486
PspFI CCCAGC 2 cut(s) 871, 924
PspGI CCWGG 6 cut(s) 156, 339, 414, 646, 1281, 1486
PspN4I GGNNCC 4 cut(s) 153, 420, 1865, 1890
PspPI GGNCC 4 cut(s) 546, 580, 1864, 1888
PstI CTGCAG 3 cut(s) 46, 358, 1903
PstNI CAGNNNCTG 3 cut(s) 104, 1616, 1855
PsuI RGATCY 3 cut(s) 66, 358, 1474
PsyI GACNNNGTC 1 cut(s) 1096
RsaI GTAC 3 cut(s) 693, 1280, 1526
RsaNI GTAC 3 cut(s) 692, 1279, 1525
RseI CAYNNNNRTG 3 cut(s) 1677, 1707, 1752
SacII CCGCGG 1 cut(s) 1166
SalI GTCGAC 1 cut(s) 1636
SaqAI TTAA 8 cut(s) 135, 432, 482, 524, 827, 855, 882, 1917
SatI GCNGC 7 cut(s) 42, 99, 191, 318, 1611, 1896, 1899
Sau3AI GATC 8 cut(s) 66, 358, 461, 472, 660, 1138, 1230, 1474
Sau96I GGNCC 4 cut(s) 546, 580, 1864, 1888
SchI GAGTC 5 cut(s) 665, 707, 761, 1734, 1889
ScrFI CCNGG 8 cut(s) 64, 158, 341, 416, 648, 1283, 1488, 1808
SduI GDGCHC 3 cut(s) 180, 1171, 1572
SfaNI GCATC 3 cut(s) 607, 1007, 1327
SfcI CTRYAG 3 cut(s) 42, 354, 1899
Sfr303I CCGCGG 1 cut(s) 1166
SgrBI CCGCGG 1 cut(s) 1166
SinI GGWCC 2 cut(s) 580, 1864
SmiMI CAYNNNNRTG 3 cut(s) 1677, 1707, 1752
SmlI CTYRAG 2 cut(s) 818, 1877
SmoI CTYRAG 2 cut(s) 818, 1877
SphI GCATGC 1 cut(s) 1327
SsiI CCGC 6 cut(s) 318, 451, 517, 1163, 1165, 1815
SspI AATATT 1 cut(s) 80
SspMI CTAG 4 cut(s) 141, 498, 602, 1343
StyD4I CCNGG 8 cut(s) 62, 156, 339, 414, 646, 1281, 1486, 1806
StyI CCWWGG 2 cut(s) 457, 756
TaaI ACNGT 4 cut(s) 185, 538, 844, 1096
TaqI TCGA 6 cut(s) 659, 903, 1068, 1233, 1572, 1637
TatI WGTACW 1 cut(s) 691
TauI GCSGC 1 cut(s) 320
TfiI GAWTC 5 cut(s) 595, 955, 1065, 1412, 1777
Tru1I TTAA 8 cut(s) 135, 432, 482, 524, 827, 855, 882, 1917
Tru9I TTAA 8 cut(s) 135, 432, 482, 524, 827, 855, 882, 1917
TscAI CASTG 4 cut(s) 190, 849, 1730, 1860
TseFI GTSAC 2 cut(s) 1679, 1754
TseI GCWGC 6 cut(s) 41, 98, 190, 1610, 1895, 1898
Tsp45I GTSAC 2 cut(s) 1679, 1754
TspDTI ATGAA 7 cut(s) 72, 249, 736, 803, 1511, 1661, 1947
TspRI CASTG 4 cut(s) 190, 849, 1730, 1860
Tth111I GACNNNGTC 1 cut(s) 1096
VpaK11BI GGWCC 2 cut(s) 580, 1864
XapI RAATTY 3 cut(s) 237, 743, 851
XbaI TCTAGA 1 cut(s) 1342
XceI RCATGY 3 cut(s) 324, 1327, 1706
XcmI CCANNNNNNNNNTGG 1 cut(s) 921
XmiI GTMKAC 1 cut(s) 1637
XmnI GAANNNNTTC 1 cut(s) 1823
XspI CTAG 4 cut(s) 141, 498, 602, 1343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.