Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0000546

Physical Location & Seq

Genomic Coordinates Reverse (-)

47451465 .. 47461813

Gene Structure 10349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00200160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGAACCCACAGCGGCCGCCGCCGCCGCTCGATGTGTTCCTCAGTTCCGGAGGTTACGCCATGGGCAATCTCTACACTGCTCTGGTTGAAAAGGGCATATCTACAATTCGAGATGATGAAAAGCTGGAGTTGGGATCTGGGCTGAGCTCAGAAGAGAAGGAAAAAATGTTTGAGAAGACGTTGCTTCCACAACTCTGCACATCAATTGAAGAATCGAAGCTTGTGATTGTCATCATTTCAAGAAATTATCTGAATTCAAGGTGGTGCTTGGAGCAGCTTGCCAAGGCTGTTGAATGCAACAAACTAATACTCCCTGTTTTCGATGATGTGCATCCAAGTGAACTCCGACTTCAAAACGGATCAGTTGCGGAAGCTTTCTTTAAGCACGAAAAAGCCTTTAAAGACAACCCAGACAAGGTGCGAAAATGGAGACGAGTTATTAATGGCGTAGCTGACTTGACTGGATGGGATTTACACCTTAGCGATGAAACCCAAGTTATTGAAGCTATTGTTGAAAGAGTTTTTATTGAATTAAATGAACCTCTACTGGGATTATTTCTCTACTGCTCCCTCTTCCCAGAGGGTTACGAATTCAGGAAACAAGAGTTGGTTCAATTGTGGATAGCTCAAGGTTTTGATATGGGAGAGAGTCCCGGAGAGACAATGGAAGATGCCGGCATTGAGCATTTCAACACTTTGGAGAGTGAAGGCTTTTTTGTGCGCTCCGGAAGAGCTGATTTAAAAGTAGAATATGATGAGGTGATCACTGTGCCCTTTTATGTCACCCCCAGCTTCTTCTACAAAGTAAATCCTTCTAAGCTTTCACTTTTGGAAAACAATTGCTCCGGTGCTAAATATTGCAGAGTTGTGGATGGCAAGTTTGATGAAGCATCAGAATCAAGCACACTACATATGTCTTTGAATTATCAAGGCATTGATGAGATGGCTTTTGGTGTTATTCAGAAATTTAAGAATCTGCGCACCTTACTTCTTCTCGCTCGTTGTCAGTCTTCCATCAAATGTGTTCCTGCTGATTTATTTTTGAGCTTAAAGTTTTTGAGTACACTGAATTTGAGTGGAACACTCATTTCTAGATTGCCTGGTTCTATTGGAGATGTCAAGCCTTTACGATATATTGATCTCTCACGTACACCTCTTTCCAGGTTGCCGGAATCTATCTGTTCTCTTGACCAGTTACAAACCTTGAAACTCAGAGGTTGTAATGACTTGTTTGATTTACCAAAAGGCATGCACAAGCTAACTGCTCTACGACATCTCGATTTCAATATCCGTCAACAGTTGAGTTACATGCCTCCACACTTGGGAAGATTGAATCATATTCAAACCTTGTCAGCATTTCTTGTTGGTACTCTTGATGGGCACCGCATCCAAGAGCTGAAGAATTTAAATGATCTTACAGGAGCGCTTTGCATTTTAAATCTTGAAAATGTGTTGAGTACGACAGATGTTAAGGAAGCATATCTGACTAGCAAAAAACACCTGCAGAGGTTGGATCTCCAATGGATTTCTCTATTTGCTGAAAATACAAAGCTGCAAGAGGACATCATTGATTCTCTTCGACCCCCTTCCACTCTTAAAGAATTAAATATATTATCTTATAGTGGGACAAAACTTCCATCTTGGTTGAGCCATCGGTCATTTGCTGACCTTATTGTGATTACCCTCGTCAATTGTGCATACTGTGAACTTTTTCCATCTCTTGGTCAGTTACCAGTGCTGAAGTTTCTTTCTGTTGTAAAGATGGATGCCGTCAAAGAAATTGATCAGACATTTTTCAGAAGTGCCCATGAACCAGTTGATCAAGCAATCCAAGCATTTCCAAAACTCGAGATACTAGAAGTTGACACCATGCCTAATTTAAAAGAGTGGAAGGAAGTAAAAGAAGGTGATTTGCCATCACTTCTTCAACTCAAAATGGAGTGCTGTCCACAACTTGTCACTCTTCCATCATTTTTACACCTCAAATCCTTGAAGTATTTAAAGCTGATTGAATGCCCAAAGCTTGTGCTATCGGACCACAGTAAACTACCAACTTCACTAGAGTCTTTGTTAATAGGAGATAGCTATGAACTGAAAAGTTGGTGCCGCAAGGAGGGAGATCAAGAATTGCAGCTGGAAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010035 GO:0010646 GO:0010648 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0022622 GO:0023051 GO:0023057 GO:0032501 GO:0032502 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0071704 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 ko04931 map04016 map04075 map04931

Pfam Domains

Protein Families

PP2C

Protein Analysis

714

Amino Acids

81.0

Weight (kDa)

5.56

Isoelectric Point (pI)

47.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIR	PF01582	24 - 179	1.6e-22	TIR domain
TIR_2	PF13676	63 - 119	9.5e-07	TIR domain
WHD_DRP	PF23559	191 - 240	1.6e-12	Disease resistance protein Winged helix domain
LRR_14	PF23598	370 - 666	5.6e-23	Leucine-rich repeat region
LRR_R13L1-DRL21	PF25019	463 - 588	2.5e-36	R13L1/DRL21 LRRs

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000546)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700
malus_domestica	MD14G1049300.v1.1
rosa_chinensis	RchiOBHm_Chr4g0433201 RchiOBHm_Chr6g0255111 RchiOBHm_Chr7g0235301 RchiOBHm_Chr7g0235351 RchiOBHm_Chr7g0235361 RchiOBHm_Chr7g0235381
rosa_laevigata	RLG00000001164 RLG00000013941
rosa_multiflora	Rmu_co8331033.1_g000001 Rmu_co8369635.1_g000001 Rmu_sc0000957.1_g000010 Rmu_sc0003304.1_g000033 Rmu_sc0003304.1_g000041 Rmu_sc0003488.1_g000001 Rmu_sc0004529.1_g000036 Rmu_sc0004637.1_g000013 Rmu_sc0004657.1_g000070 Rmu_sc0004657.1_g000076 Rmu_sc0006578.1_g000004 Rmu_sc0011027.1_g000008 Rmu_sc0011027.1_g000010 Rmu_sc0013813.1_g000001 Rmu_sc0014112.1_g000001 Rmu_sc0014112.1_g000002 Rmu_sc0014112.1_g000004 Rmu_ssc0000011.1_g000040 Rmu_ssc0000295.1_g000011
rosa_roxburghii	Rroxscaffold_2G00103040 Rroxscaffold_3G00226100 Rroxscaffold_3G00226120 Rroxscaffold_5G00374710 Rroxscaffold_5G00374720 Rroxscaffold_7G00200160 Rroxscaffold_7G00200190
rosa_rugosa	Rorug05G0474400 Rorug05G0474400 Rorug06G0037400 Rorug06G0037500 Rorug06G0037600 Rorug06G0038300 Rorug06G0038300 Rorug06G0038400 Rorug06G0038500 Rorug07G0289800 Rorug07G0289900 Rorug07G0290000 Rorug07G0290000
rosa_samantha	Rh4AG320500 Rh4AG320700 Rh4AG321100 Rh4DG324200 Rh4DG324700 Rh6BG067500 Rh6CG066600 Rh6CG066700 Rh6DG063600 Rh6DG063700 Rh6DG147600 Rh7AG444800 Rh7AG445000 Rh7BG416700 Rh7BG416800 Rh7CG465200 Rh7CG465300 Rh7CG465700 Rh7DG433600 Rh7DG433800
rosa_wichuraiana	Rw0G008730 Rw0G008770 Rw4G027830 Rw7G036940 Rw7G036980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1509
Acc16I	TGCGCA	1 cut(s)	980
Acc36I	ACCTGC	1 cut(s)	1509
AccB1I	GGYRCC	2 cut(s)	1380, 2103
AccB7I	CCANNNNNTGG	1 cut(s)	1721
AccBSI	CCGCTC	1 cut(s)	28
AccIII	TCCGGA	2 cut(s)	47, 725
AciI	CCGC	8 cut(s)	13, 17, 20, 23, 26, 368, 1384, 2107
AclWI	GGATC	3 cut(s)	142, 367, 1521
AcoI	YGGCCR	1 cut(s)	14
AcsI	RAATTY	5 cut(s)	253, 590, 965, 1069, 1402
AcuI	CTGAAG	2 cut(s)	1418, 1760
AfaI	GTAC	4 cut(s)	1063, 1150, 1369, 1459
AfeI	AGCGCT	1 cut(s)	1425
AfiI	CCNNNNNNNGG	5 cut(s)	415, 548, 1322, 1721, 2113
AjnI	CCWGG	2 cut(s)	1099, 1160
AjuI	GAANNNNNNNTTGG	2 cut(s)	590, 622
Alw21I	GWGCWC	1 cut(s)	149
Alw26I	GTCTC	2 cut(s)	424, 653
AlwI	GGATC	3 cut(s)	142, 367, 1521
Ama87I	CYCGRG	1 cut(s)	1847
Aor13HI	TCCGGA	2 cut(s)	47, 725
Aor51HI	AGCGCT	1 cut(s)	1425
AoxI	GGCC	1 cut(s)	14
ApeKI	GCWGC	3 cut(s)	274, 1552, 2131
ApoI	RAATTY	5 cut(s)	253, 590, 965, 1069, 1402
AseI	ATTAAT	1 cut(s)	441
Asp700I	GAANNNNTTC	1 cut(s)	1710
AspLEI	GCGC	3 cut(s)	723, 981, 1426
AspS9I	GGNCC	1 cut(s)	2035
AsuC2I	CCSGG	1 cut(s)	654
AsuHPI	GGTGA	3 cut(s)	772, 775, 1919
AvaI	CYCGRG	1 cut(s)	1847
AvaII	GGWCC	1 cut(s)	2035
BaeGI	GKGCMC	3 cut(s)	774, 1383, 1807
BanI	GGYRCC	2 cut(s)	1380, 2103
BanII	GRGCYC	1 cut(s)	149
BbsI	GAAGAC	2 cut(s)	182, 1002
Bbv12I	GWGCWC	1 cut(s)	149
BbvI	GCAGC	2 cut(s)	286, 1539
BceAI	ACGGC	1 cut(s)	1754
BciT130I	CCWGG	2 cut(s)	1101, 1162
BclI	TGATCA	3 cut(s)	762, 1783, 1819
BcnI	CCSGG	1 cut(s)	654
BcoDI	GTCTC	2 cut(s)	424, 653
BfaI	CTAG	4 cut(s)	1092, 1488, 1856, 2060
BfmI	CTRYAG	1 cut(s)	1502
BfoI	RGCGCY	1 cut(s)	1427
BfuAI	ACCTGC	1 cut(s)	1509
BisI	GCNGC	9 cut(s)	14, 17, 20, 23, 26, 275, 1553, 2107, 2132
BlpI	GCTNAGC	1 cut(s)	143
BlsI	GCNGC	9 cut(s)	15, 18, 21, 24, 27, 276, 1554, 2108, 2133
Bme1390I	CCNGG	3 cut(s)	654, 1101, 1162
Bme18I	GGWCC	1 cut(s)	2035
BmeT110I	CYCGRG	1 cut(s)	1847
BmgT120I	GGNCC	1 cut(s)	2035
BmiI	GGNNCC	2 cut(s)	1382, 2105
BmrFI	CCNGG	3 cut(s)	654, 1101, 1162
BmrI	ACTGGG	1 cut(s)	557
BmsI	GCATC	5 cut(s)	340, 661, 899, 1395, 1756
BmuI	ACTGGG	1 cut(s)	557
BpiI	GAAGAC	2 cut(s)	182, 1002
BpmI	CTGGAG	1 cut(s)	146
Bpu10I	CCTNAGC	1 cut(s)	479
Bpu1102I	GCTNAGC	1 cut(s)	143
BpuEI	CTTGAG	1 cut(s)	612
BpuMI	CCSGG	1 cut(s)	654
BsaAI	YACGTR	1 cut(s)	1148
BsaBI	GATNNNNATC	2 cut(s)	230, 330
BsaJI	CCNNGG	2 cut(s)	60, 282
BsaWI	WCCGGW	3 cut(s)	47, 725, 845
BsaXI	ACNNNNNCTCC	4 cut(s)	294, 324, 827, 857
Bsc4I	CCNNNNNNNGG	5 cut(s)	415, 548, 1322, 1721, 2113
Bse118I	RCCGGY	1 cut(s)	674
Bse1I	ACTGG	5 cut(s)	466, 552, 1192, 1733, 1814
Bse8I	GATNNNNATC	2 cut(s)	230, 330
BseAI	TCCGGA	2 cut(s)	47, 725
BseBI	CCWGG	2 cut(s)	1101, 1162
BseDI	CCNNGG	2 cut(s)	60, 282
BseGI	GGATG	5 cut(s)	331, 470, 877, 1386, 1771
BseJI	GATNNNNATC	2 cut(s)	230, 330
BseLI	CCNNNNNNNGG	5 cut(s)	415, 548, 1322, 1721, 2113
BseMII	CTCAG	4 cut(s)	55, 134, 162, 1225
BseNI	ACTGG	5 cut(s)	466, 552, 1192, 1733, 1814
BseSI	GKGCMC	3 cut(s)	774, 1383, 1807
BseX3I	CGGCCG	1 cut(s)	14
BseXI	GCAGC	2 cut(s)	286, 1539
BseYI	CCCAGC	1 cut(s)	788
BsgI	GTGCAG	1 cut(s)	181
Bsh1285I	CGRYCG	1 cut(s)	17
BshFI	GGCC	1 cut(s)	16
BshNI	GGYRCC	2 cut(s)	1380, 2103
BsiEI	CGRYCG	1 cut(s)	17
BsiHKAI	GWGCWC	1 cut(s)	149
BsiHKCI	CYCGRG	1 cut(s)	1847
BsiSI	CCGG	6 cut(s)	48, 654, 675, 726, 846, 1169
BslFI	GGGAC	2 cut(s)	636, 1639
BslI	CCNNNNNNNGG	5 cut(s)	415, 548, 1322, 1721, 2113
BsmAI	GTCTC	2 cut(s)	424, 653
BsmBI	CGTCTC	1 cut(s)	424
BsmFI	GGGAC	2 cut(s)	636, 1639
BsmI	GAATGC	2 cut(s)	299, 2018
BsnI	GGCC	1 cut(s)	16
BsoBI	CYCGRG	1 cut(s)	1847
Bsp1286I	GDGCHC	4 cut(s)	149, 774, 1383, 1807
Bsp13I	TCCGGA	2 cut(s)	47, 725
Bsp143I	GATC	9 cut(s)	134, 359, 762, 1138, 1411, 1513, 1783, 1819, 2119
Bsp1720I	GCTNAGC	1 cut(s)	143
Bsp19I	CCATGG	1 cut(s)	60
BspACI	CCGC	8 cut(s)	13, 17, 20, 23, 26, 368, 1384, 2107
BspANI	GGCC	1 cut(s)	16
BspCNI	CTCAG	4 cut(s)	54, 135, 161, 1224
BspEI	TCCGGA	2 cut(s)	47, 725
BspLI	GGNNCC	2 cut(s)	1382, 2105
BspMAI	CTGCAG	1 cut(s)	1506
BspMI	ACCTGC	1 cut(s)	1509
BspPI	GGATC	3 cut(s)	142, 367, 1521
BspQI	GCTCTTC	1 cut(s)	724
BspT107I	GGYRCC	2 cut(s)	1380, 2103
BsrBI	CCGCTC	1 cut(s)	28
BsrFI	RCCGGY	1 cut(s)	674
BsrI	ACTGG	5 cut(s)	466, 552, 1192, 1733, 1814
BssAI	RCCGGY	1 cut(s)	674
BssECI	CCNNGG	2 cut(s)	60, 282
BssMI	GATC	9 cut(s)	134, 359, 762, 1138, 1411, 1513, 1783, 1819, 2119
BssT1I	CCWWGG	2 cut(s)	60, 282
Bst2UI	CCWGG	2 cut(s)	1101, 1162
Bst4CI	ACNGT	4 cut(s)	769, 1299, 1703, 2042
Bst6I	CTCTTC	5 cut(s)	147, 578, 724, 1581, 1968
BstBAI	YACGTR	1 cut(s)	1148
BstC8I	GCNNGC	3 cut(s)	279, 676, 1250
BstDEI	CTNAG	6 cut(s)	41, 143, 148, 479, 816, 1211
BstDSI	CCRYGG	1 cut(s)	60
BstF5I	GGATG	5 cut(s)	331, 470, 877, 1386, 1771
BstH2I	RGCGCY	1 cut(s)	1427
BstHHI	GCGC	3 cut(s)	723, 981, 1426
BstKTI	GATC	9 cut(s)	137, 362, 765, 1141, 1414, 1516, 1786, 1822, 2122
BstMAI	GTCTC	2 cut(s)	424, 653
BstMBI	GATC	9 cut(s)	134, 359, 762, 1138, 1411, 1513, 1783, 1819, 2119
BstMCI	CGRYCG	1 cut(s)	17
BstMWI	GCNNNNNNNGC	4 cut(s)	19, 22, 25, 1832
BstNI	CCWGG	2 cut(s)	1101, 1162
BstNSI	RCATGY	2 cut(s)	1252, 1312
BstSCI	CCNGG	3 cut(s)	652, 1099, 1160
BstSFI	CTRYAG	1 cut(s)	1502
BstSLI	GKGCMC	3 cut(s)	774, 1383, 1807
BstV1I	GCAGC	2 cut(s)	286, 1539
BstV2I	GAAGAC	2 cut(s)	182, 1002
BstX2I	RGATCY	2 cut(s)	134, 1513
BstYI	RGATCY	2 cut(s)	134, 1513
BstZI	CGGCCG	1 cut(s)	14
BsuRI	GGCC	1 cut(s)	16
BtgI	CCRYGG	1 cut(s)	60
BtgZI	GCGATG	1 cut(s)	498
BtsCI	GGATG	5 cut(s)	331, 470, 877, 1386, 1771
BtsI	GCAGTG	1 cut(s)	75
BtsIMutI	CAGTG	4 cut(s)	75, 765, 1064, 1740
BveI	ACCTGC	1 cut(s)	1509
Cac8I	GCNNGC	3 cut(s)	279, 676, 1250
CciNI	GCGGCCGC	1 cut(s)	14
CfoI	GCGC	3 cut(s)	723, 981, 1426
Cfr10I	RCCGGY	1 cut(s)	674
Cfr13I	GGNCC	1 cut(s)	2035
Csp6I	GTAC	4 cut(s)	1062, 1149, 1368, 1458
CviAII	CATG	5 cut(s)	61, 1249, 1309, 1808, 1870
CviQI	GTAC	4 cut(s)	1062, 1149, 1368, 1458
DdeI	CTNAG	6 cut(s)	41, 143, 148, 479, 816, 1211
DpnI	GATC	9 cut(s)	136, 361, 764, 1140, 1413, 1515, 1785, 1821, 2121
DpnII	GATC	9 cut(s)	134, 359, 762, 1138, 1411, 1513, 1783, 1819, 2119
DraI	TTTAAA	6 cut(s)	400, 741, 1407, 1437, 1881, 2001
EaeI	YGGCCR	1 cut(s)	14
EagI	CGGCCG	1 cut(s)	14
Eam1104I	CTCTTC	5 cut(s)	147, 578, 724, 1581, 1968
EarI	CTCTTC	5 cut(s)	147, 578, 724, 1581, 1968
Ecl136II	GAGCTC	1 cut(s)	147
EclXI	CGGCCG	1 cut(s)	14
Eco130I	CCWWGG	2 cut(s)	60, 282
Eco24I	GRGCYC	1 cut(s)	149
Eco47I	GGWCC	1 cut(s)	2035
Eco47III	AGCGCT	1 cut(s)	1425
Eco52I	CGGCCG	1 cut(s)	14
Eco53kI	GAGCTC	1 cut(s)	147
Eco57I	CTGAAG	2 cut(s)	1418, 1760
Eco88I	CYCGRG	1 cut(s)	1847
EcoICRI	GAGCTC	1 cut(s)	147
EcoRI	GAATTC	2 cut(s)	253, 590
EcoRII	CCWGG	2 cut(s)	1099, 1160
EcoT14I	CCWWGG	2 cut(s)	60, 282
EcoT38I	GRGCYC	1 cut(s)	149
ErhI	CCWWGG	2 cut(s)	60, 282
Esp3I	CGTCTC	1 cut(s)	424
FaeI	CATG	5 cut(s)	64, 1252, 1312, 1811, 1873
FaqI	GGGAC	2 cut(s)	636, 1639
FatI	CATG	5 cut(s)	60, 1248, 1308, 1807, 1869
FauNDI	CATATG	1 cut(s)	912
FbaI	TGATCA	3 cut(s)	762, 1783, 1819
Fnu4HI	GCNGC	9 cut(s)	14, 17, 20, 23, 26, 275, 1553, 2107, 2132
FokI	GGATG	5 cut(s)	318, 477, 884, 1373, 1778
FriOI	GRGCYC	1 cut(s)	149
Fsp4HI	GCNGC	9 cut(s)	14, 17, 20, 23, 26, 275, 1553, 2107, 2132
FspBI	CTAG	4 cut(s)	1092, 1488, 1856, 2060
FspI	TGCGCA	1 cut(s)	980
GlaI	GCGC	3 cut(s)	722, 980, 1425
GluI	GCNGC	9 cut(s)	14, 17, 20, 23, 26, 275, 1553, 2107, 2132
GsaI	CCCAGC	1 cut(s)	792
GsuI	CTGGAG	1 cut(s)	146
HaeII	RGCGCY	1 cut(s)	1427
HaeIII	GGCC	1 cut(s)	16
HapII	CCGG	6 cut(s)	48, 654, 675, 726, 846, 1169
HhaI	GCGC	3 cut(s)	723, 981, 1426
Hin1II	CATG	5 cut(s)	64, 1252, 1312, 1811, 1873
Hin6I	GCGC	3 cut(s)	721, 979, 1424
HinP1I	GCGC	3 cut(s)	721, 979, 1424
HincII	GTYRAC	2 cut(s)	1295, 1864
HindII	GTYRAC	2 cut(s)	1295, 1864
HindIII	AAGCTT	4 cut(s)	218, 372, 818, 2021
HinfI	GANTC	8 cut(s)	212, 649, 896, 973, 1172, 1333, 1571, 2063
HpaII	CCGG	6 cut(s)	48, 654, 675, 726, 846, 1169
HphI	GGTGA	3 cut(s)	772, 775, 1919
Hpy166II	GTNNAC	8 cut(s)	341, 1064, 1151, 1295, 1706, 1864, 1949, 2045
Hpy8I	GTNNAC	8 cut(s)	341, 1064, 1151, 1295, 1706, 1864, 1949, 2045
HpyAV	CCTTC	6 cut(s)	151, 701, 822, 1596, 1885, 1898
HpyCH4III	ACNGT	4 cut(s)	769, 1299, 1703, 2042
HpyCH4IV	ACGT	2 cut(s)	179, 1147
HpyF10VI	GCNNNNNNNGC	4 cut(s)	19, 22, 25, 1832
HpyF3I	CTNAG	6 cut(s)	41, 143, 148, 479, 816, 1211
HpySE526I	ACGT	2 cut(s)	179, 1147
Hsp92II	CATG	5 cut(s)	64, 1252, 1312, 1811, 1873
HspAI	GCGC	3 cut(s)	721, 979, 1424
Kpn2I	TCCGGA	2 cut(s)	47, 725
KroI	GCCGGC	1 cut(s)	674
KroNI	GCCGGC	1 cut(s)	676
Ksp22I	TGATCA	3 cut(s)	762, 1783, 1819
Kzo9I	GATC	9 cut(s)	134, 359, 762, 1138, 1411, 1513, 1783, 1819, 2119
LguI	GCTCTTC	1 cut(s)	724
LmnI	GCTCC	5 cut(s)	271, 572, 728, 848, 1421
Lsp1109I	GCAGC	2 cut(s)	286, 1539
LweI	GCATC	5 cut(s)	340, 661, 899, 1395, 1756
MaeI	CTAG	4 cut(s)	1092, 1488, 1856, 2060
MaeII	ACGT	2 cut(s)	179, 1147
MaeIII	GTNAC	7 cut(s)	53, 584, 781, 1194, 1304, 1728, 1957
MalI	GATC	9 cut(s)	136, 361, 764, 1140, 1413, 1515, 1785, 1821, 2121
MbiI	CCGCTC	1 cut(s)	28
MboI	GATC	9 cut(s)	134, 359, 762, 1138, 1411, 1513, 1783, 1819, 2119
MfeI	CAATTG	4 cut(s)	204, 614, 838, 1690
MflI	RGATCY	2 cut(s)	134, 1513
MhlI	GDGCHC	4 cut(s)	149, 774, 1383, 1807
MlyI	GAGTC	2 cut(s)	658, 2072
MmeI	TCCRAC	2 cut(s)	370, 1491
MroI	TCCGGA	2 cut(s)	47, 725
MroNI	GCCGGC	1 cut(s)	674
MroXI	GAANNNNTTC	1 cut(s)	1710
MslI	CAYNNNNRTG	1 cut(s)	336
MspA1I	CMGCKG	2 cut(s)	13, 2134
MspI	CCGG	6 cut(s)	48, 654, 675, 726, 846, 1169
MspR9I	CCNGG	3 cut(s)	654, 1101, 1162
MunI	CAATTG	4 cut(s)	204, 614, 838, 1690
Mva1269I	GAATGC	2 cut(s)	299, 2018
MvaI	CCWGG	2 cut(s)	1101, 1162
MwoI	GCNNNNNNNGC	4 cut(s)	19, 22, 25, 1832
NaeI	GCCGGC	1 cut(s)	676
NciI	CCSGG	1 cut(s)	654
NcoI	CCATGG	1 cut(s)	60
NdeI	CATATG	1 cut(s)	912
NdeII	GATC	9 cut(s)	134, 359, 762, 1138, 1411, 1513, 1783, 1819, 2119
NgoMIV	GCCGGC	1 cut(s)	674
NlaIII	CATG	5 cut(s)	64, 1252, 1312, 1811, 1873
NlaIV	GGNNCC	2 cut(s)	1382, 2105
NmuCI	GTSAC	2 cut(s)	781, 1957
NotI	GCGGCCGC	1 cut(s)	14
NsbI	TGCGCA	1 cut(s)	980
NspI	RCATGY	2 cut(s)	1252, 1312
PaeI	GCATGC	1 cut(s)	1252
PaeR7I	CTCGAG	1 cut(s)	1847
PaqCI	CACCTGC	1 cut(s)	1509
PciSI	GCTCTTC	1 cut(s)	724
PctI	GAATGC	2 cut(s)	299, 2018
PdiI	GCCGGC	1 cut(s)	676
PdmI	GAANNNNTTC	1 cut(s)	1710
PfeI	GAWTC	6 cut(s)	212, 896, 973, 1172, 1333, 1571
PflMI	CCANNNNNTGG	1 cut(s)	1721
PfoI	TCCNGGA	1 cut(s)	652
PkrI	GCNGC	9 cut(s)	15, 18, 21, 24, 27, 276, 1554, 2108, 2133
PleI	GAGTC	2 cut(s)	657, 2071
PpsI	GAGTC	2 cut(s)	657, 2071
Ppu21I	YACGTR	1 cut(s)	1148
PshBI	ATTAAT	1 cut(s)	441
Psp124BI	GAGCTC	1 cut(s)	149
Psp6I	CCWGG	2 cut(s)	1099, 1160
PspFI	CCCAGC	1 cut(s)	788
PspGI	CCWGG	2 cut(s)	1099, 1160
PspN4I	GGNNCC	2 cut(s)	1382, 2105
PspPI	GGNCC	1 cut(s)	2035
PstI	CTGCAG	1 cut(s)	1506
PsuI	RGATCY	2 cut(s)	134, 1513
PvuII	CAGCTG	1 cut(s)	2134
RsaI	GTAC	4 cut(s)	1063, 1150, 1369, 1459
RsaNI	GTAC	4 cut(s)	1062, 1149, 1368, 1458
RseI	CAYNNNNRTG	1 cut(s)	336
SacI	GAGCTC	1 cut(s)	149
SapI	GCTCTTC	1 cut(s)	724
SatI	GCNGC	9 cut(s)	14, 17, 20, 23, 26, 275, 1553, 2107, 2132
Sau3AI	GATC	9 cut(s)	134, 359, 762, 1138, 1411, 1513, 1783, 1819, 2119
Sau96I	GGNCC	1 cut(s)	2035
SchI	GAGTC	2 cut(s)	658, 2072
ScrFI	CCNGG	3 cut(s)	654, 1101, 1162
SduI	GDGCHC	4 cut(s)	149, 774, 1383, 1807
SfaNI	GCATC	5 cut(s)	340, 661, 899, 1395, 1756
SfcI	CTRYAG	1 cut(s)	1502
Sfr274I	CTCGAG	1 cut(s)	1847
SinI	GGWCC	1 cut(s)	2035
SlaI	CTCGAG	1 cut(s)	1847
SmiI	ATTTAAAT	1 cut(s)	1407
SmiMI	CAYNNNNRTG	1 cut(s)	336
SmlI	CTYRAG	2 cut(s)	627, 1847
SmoI	CTYRAG	2 cut(s)	627, 1847
SphI	GCATGC	1 cut(s)	1252
SsiI	CCGC	8 cut(s)	13, 17, 20, 23, 26, 368, 1384, 2107
SspI	AATATT	1 cut(s)	857
SspMI	CTAG	4 cut(s)	1092, 1488, 1856, 2060
SstI	GAGCTC	1 cut(s)	149
StyD4I	CCNGG	3 cut(s)	652, 1099, 1160
StyI	CCWWGG	2 cut(s)	60, 282
SwaI	ATTTAAAT	1 cut(s)	1407
TaaI	ACNGT	4 cut(s)	769, 1299, 1703, 2042
TaiI	ACGT	2 cut(s)	182, 1150
TaqI	TCGA	7 cut(s)	30, 109, 215, 321, 1278, 1579, 1848
TaqII	GACCGA	1 cut(s)	1644
TatI	WGTACW	1 cut(s)	1061
TauI	GCSGC	6 cut(s)	16, 19, 22, 25, 28, 2109
TfiI	GAWTC	6 cut(s)	212, 896, 973, 1172, 1333, 1571
TscAI	CASTG	4 cut(s)	82, 772, 1071, 1740
TseFI	GTSAC	2 cut(s)	781, 1957
TseI	GCWGC	3 cut(s)	274, 1552, 2131
Tsp45I	GTSAC	2 cut(s)	781, 1957
TspDTI	ATGAA	7 cut(s)	17, 132, 501, 552, 900, 1824, 2103
TspGWI	ACGGA	2 cut(s)	372, 1280
TspRI	CASTG	4 cut(s)	82, 772, 1071, 1740
Van91I	CCANNNNNTGG	1 cut(s)	1721
VpaK11BI	GGWCC	1 cut(s)	2035
VspI	ATTAAT	1 cut(s)	441
XapI	RAATTY	5 cut(s)	253, 590, 965, 1069, 1402
XbaI	TCTAGA	1 cut(s)	1091
XceI	RCATGY	2 cut(s)	1252, 1312
XhoI	CTCGAG	1 cut(s)	1847
XmnI	GAANNNNTTC	1 cut(s)	1710
XspI	CTAG	4 cut(s)	1092, 1488, 1856, 2060

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.