Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0000546

Physical Location & Seq

Genomic Coordinates Reverse (-)

47547923 .. 47552444

Gene Structure 4522 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00200190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGAACCCACAGCCGCCGCCCGATGTGTTCCTCAGTTCCGGAGGTTACGCCATGGGCAATCTCTACACTGCTCTGGTTGAAAAGGGCATATCTACAATTCGAGATGATGAAAAGCTGGAGTTGGGATCTGGGCTGAGCTCAGAAGAGAAGGAAAAAATGTTTGAGAAGACGTTGCTTCCACAACTCTGCACATCAATTGAAGAATCGAAGCTTGTGATTGTCATCATTTCAAGAAATTATCTGAATTCAAGGTGGTGCTTGGAGCAGCTTGCCAAGGCTGTTGAATGCAACAAACTAATACTCCCTGTTTTCGATGATGTGCATCCAAGTGAACTCCGACTTCAAAACGGATCAGTTGCGGAAGCTTTCTTTAAGCACGAAAAAGCCTTTAAAGACAACCCAGACAAGGTGCGAAAATGGAGACGAGTTATTAATGGCGTAGCTGACTTGACTGGATGGGATTTACACCTTAGGTATCTCTCTCTCTCTCTCTCTCTCTCTCTGGTCTACATTACATTGTATGAATTTGTGTTATCTACATTTAGCAGGTCCCTTGTTTATTCATTTATTTATCTAACTGCATGTAGCGATGAAACCCAAGTTATTGAAGCTATTGTTGAAAGAGTTTTTATTGAATTAAATGAACCTCTACTGGGATTATTTCTCTACTGCTCCCTCTTCCCAGAGGGTTACGAATTCAGGAAACAAGAGTTGGTTCAATTGTGGATAGCTCAAGGTTTTGATATGGGAGAGAGTCCCGGAGAGACAATGGAAGATGCCGGCATTGAGCATTTCAACACTTTGGAGAGTGAAGGCTTTTTTGTGCGCTCCGGAAGAGCTGATTTAAAAGTAGAATATGATGAGGTGATCACTGTGCCCTTTTATGTCACCCCCAGCTTCTTCTACAAAGTAAATCCTTCTAAGCTTTCACTTTTGGAAAACAATTGCTCCGGTGCTAAATATTGCAGAGTTGTGGATGGCAAGTTTGATGAAGCATCAGAATCAAGCACACTACATATGTCTTTGAATTATCAAGGCATTGATGAGATGGCTTTTGGTGTTATTCAGAAATTTAAGAATCTGCGCACCTTACTTCTTCTCGCTCGTTGTCAGTCTTCCATCAAATGTGTTCCTGCTGATTTATTTTTGAGCTTAAAGTTTTTGAGTACACTGAATTTGAGTGGAACACTCATTTCTAGATTGCCTGGTTCTATTGGAGATGTCAAGCCTTTACGATATATTGATCTCTCACGTACACCTCTTTCCAGGTTGCCGGAATCTATCTGTTCTCTTGACCAGTTACAAACCTTGAAACTCAGAGGTTGTAATGACTTGTTTGATTTACCAAAAGGCATGCACAAGCTAACTGCTCTACGACATCTCGATTTCAATATCCGTCAACAGTTGAGTTACATGCCTCCACACTTGGGAAGATTGAATCATATTCAAACCTTGTCAGCATTTCTTGTTGGTACTCTTGATGGGCACCGCATCCAAGAGCTGAAGAATTTAAATGATCTTACAGGAGCGCTTTGCATTTTAAATCTTGAAAATGTGTTGAGTACGACAGATGTTAAGGAAGCATATCTGACTAGCAAAAAACACCTGCAGAGGTTGGATCTCCAATGGATTTCTCTATTTGCTGAAAATACAAAGCTGCAAGAGGACATCATTGATTCTCTTCGACCCCCCTTCCACTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010035 GO:0010646 GO:0010648 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0022622 GO:0023051 GO:0023057 GO:0032501 GO:0032502 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0071704 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 ko04931 map04016 map04075 map04931

Pfam Domains

Protein Families

PP2C

Protein Analysis

567

Amino Acids

64.33

Weight (kDa)

5.6

Isoelectric Point (pI)

46.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIR	PF01582	21 - 155	2.5e-20	TIR domain
TIR_2	PF13676	60 - 117	6.9e-07	TIR domain
WHD_DRP	PF23559	226 - 275	1.1e-12	Disease resistance protein Winged helix domain
LRR_14	PF23598	405 - 540	1.1e-14	Leucine-rich repeat region
LRR_R13L1-DRL21	PF25019	498 - 564	1.5e-14	R13L1/DRL21 LRRs

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000546)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700
malus_domestica	MD14G1049300.v1.1
rosa_chinensis	RchiOBHm_Chr4g0433201 RchiOBHm_Chr6g0255111 RchiOBHm_Chr7g0235301 RchiOBHm_Chr7g0235351 RchiOBHm_Chr7g0235361 RchiOBHm_Chr7g0235381
rosa_laevigata	RLG00000001164 RLG00000013941
rosa_multiflora	Rmu_co8331033.1_g000001 Rmu_co8369635.1_g000001 Rmu_sc0000957.1_g000010 Rmu_sc0003304.1_g000033 Rmu_sc0003304.1_g000041 Rmu_sc0003488.1_g000001 Rmu_sc0004529.1_g000036 Rmu_sc0004637.1_g000013 Rmu_sc0004657.1_g000070 Rmu_sc0004657.1_g000076 Rmu_sc0006578.1_g000004 Rmu_sc0011027.1_g000008 Rmu_sc0011027.1_g000010 Rmu_sc0013813.1_g000001 Rmu_sc0014112.1_g000001 Rmu_sc0014112.1_g000002 Rmu_sc0014112.1_g000004 Rmu_ssc0000011.1_g000040 Rmu_ssc0000295.1_g000011
rosa_roxburghii	Rroxscaffold_2G00103040 Rroxscaffold_3G00226100 Rroxscaffold_3G00226120 Rroxscaffold_5G00374710 Rroxscaffold_5G00374720 Rroxscaffold_7G00200160 Rroxscaffold_7G00200190
rosa_rugosa	Rorug05G0474400 Rorug05G0474400 Rorug06G0037400 Rorug06G0037500 Rorug06G0037600 Rorug06G0038300 Rorug06G0038300 Rorug06G0038400 Rorug06G0038500 Rorug07G0289800 Rorug07G0289900 Rorug07G0290000 Rorug07G0290000
rosa_samantha	Rh4AG320500 Rh4AG320700 Rh4AG321100 Rh4DG324200 Rh4DG324700 Rh6BG067500 Rh6CG066600 Rh6CG066700 Rh6DG063600 Rh6DG063700 Rh6DG147600 Rh7AG444800 Rh7AG445000 Rh7BG416700 Rh7BG416800 Rh7CG465200 Rh7CG465300 Rh7CG465700 Rh7DG433600 Rh7DG433800
rosa_wichuraiana	Rw0G008730 Rw0G008770 Rw4G027830 Rw7G036940 Rw7G036980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1614
Acc16I	TGCGCA	1 cut(s)	1085
Acc36I	ACCTGC	2 cut(s)	537, 1614
AccB1I	GGYRCC	1 cut(s)	1485
AccI	GTMKAC	1 cut(s)	507
AccIII	TCCGGA	2 cut(s)	38, 830
AciI	CCGC	4 cut(s)	14, 17, 359, 1489
AclWI	GGATC	3 cut(s)	133, 358, 1626
AcsI	RAATTY	6 cut(s)	244, 524, 695, 1070, 1174, 1507
AcuI	CTGAAG	1 cut(s)	1523
AfaI	GTAC	4 cut(s)	1168, 1255, 1474, 1564
AfeI	AGCGCT	1 cut(s)	1530
AfiI	CCNNNNNNNGG	3 cut(s)	406, 653, 1427
AjnI	CCWGG	2 cut(s)	1204, 1265
AjuI	GAANNNNNNNTTGG	2 cut(s)	695, 727
Alw21I	GWGCWC	1 cut(s)	140
Alw26I	GTCTC	2 cut(s)	415, 758
AlwI	GGATC	3 cut(s)	133, 358, 1626
Aor13HI	TCCGGA	2 cut(s)	38, 830
Aor51HI	AGCGCT	1 cut(s)	1530
ApeKI	GCWGC	2 cut(s)	265, 1657
ApoI	RAATTY	6 cut(s)	244, 524, 695, 1070, 1174, 1507
AseI	ATTAAT	1 cut(s)	432
AspLEI	GCGC	3 cut(s)	828, 1086, 1531
AspS9I	GGNCC	1 cut(s)	549
AsuC2I	CCSGG	1 cut(s)	759
AsuHPI	GGTGA	2 cut(s)	877, 880
AvaII	GGWCC	1 cut(s)	549
AxyI	CCTNAGG	1 cut(s)	470
BaeGI	GKGCMC	2 cut(s)	879, 1488
BanI	GGYRCC	1 cut(s)	1485
BanII	GRGCYC	1 cut(s)	140
BbsI	GAAGAC	2 cut(s)	173, 1107
Bbv12I	GWGCWC	1 cut(s)	140
BbvI	GCAGC	2 cut(s)	277, 1644
BccI	CCATC	5 cut(s)	450, 971, 1042, 1127, 1475
BciT130I	CCWGG	2 cut(s)	1206, 1267
BclI	TGATCA	1 cut(s)	867
BcnI	CCSGG	1 cut(s)	759
BcoDI	GTCTC	2 cut(s)	415, 758
BfaI	CTAG	2 cut(s)	1197, 1593
BfmI	CTRYAG	1 cut(s)	1607
BfoI	RGCGCY	1 cut(s)	1532
BfuAI	ACCTGC	2 cut(s)	537, 1614
BisI	GCNGC	4 cut(s)	14, 17, 266, 1658
BlpI	GCTNAGC	1 cut(s)	134
BlsI	GCNGC	4 cut(s)	15, 18, 267, 1659
Bme1390I	CCNGG	3 cut(s)	759, 1206, 1267
Bme18I	GGWCC	1 cut(s)	549
BmgT120I	GGNCC	1 cut(s)	549
BmiI	GGNNCC	2 cut(s)	551, 1487
BmrFI	CCNGG	3 cut(s)	759, 1206, 1267
BmrI	ACTGGG	1 cut(s)	662
BmsI	GCATC	4 cut(s)	331, 766, 1004, 1500
BmuI	ACTGGG	1 cut(s)	662
BpiI	GAAGAC	2 cut(s)	173, 1107
BpmI	CTGGAG	1 cut(s)	137
Bpu1102I	GCTNAGC	1 cut(s)	134
BpuEI	CTTGAG	1 cut(s)	717
BpuMI	CCSGG	1 cut(s)	759
BsaAI	YACGTR	1 cut(s)	1253
BsaBI	GATNNNNATC	2 cut(s)	221, 321
BsaJI	CCNNGG	2 cut(s)	51, 273
BsaWI	WCCGGW	3 cut(s)	38, 830, 950
BsaXI	ACNNNNNCTCC	4 cut(s)	285, 315, 932, 962
Bsc4I	CCNNNNNNNGG	3 cut(s)	406, 653, 1427
Bse118I	RCCGGY	1 cut(s)	779
Bse1I	ACTGG	3 cut(s)	457, 657, 1297
Bse21I	CCTNAGG	1 cut(s)	470
Bse8I	GATNNNNATC	2 cut(s)	221, 321
BseAI	TCCGGA	2 cut(s)	38, 830
BseBI	CCWGG	2 cut(s)	1206, 1267
BseDI	CCNNGG	2 cut(s)	51, 273
BseGI	GGATG	4 cut(s)	322, 461, 982, 1491
BseJI	GATNNNNATC	2 cut(s)	221, 321
BseLI	CCNNNNNNNGG	3 cut(s)	406, 653, 1427
BseMII	CTCAG	4 cut(s)	46, 125, 153, 1330
BseNI	ACTGG	3 cut(s)	457, 657, 1297
BseSI	GKGCMC	2 cut(s)	879, 1488
BseXI	GCAGC	2 cut(s)	277, 1644
BseYI	CCCAGC	1 cut(s)	893
BsgI	GTGCAG	1 cut(s)	172
BshNI	GGYRCC	1 cut(s)	1485
BsiHKAI	GWGCWC	1 cut(s)	140
BsiSI	CCGG	6 cut(s)	39, 759, 780, 831, 951, 1274
BslFI	GGGAC	2 cut(s)	535, 741
BslI	CCNNNNNNNGG	3 cut(s)	406, 653, 1427
BsmAI	GTCTC	2 cut(s)	415, 758
BsmBI	CGTCTC	1 cut(s)	415
BsmFI	GGGAC	2 cut(s)	535, 741
BsmI	GAATGC	1 cut(s)	290
Bsp1286I	GDGCHC	3 cut(s)	140, 879, 1488
Bsp13I	TCCGGA	2 cut(s)	38, 830
Bsp143I	GATC	6 cut(s)	125, 350, 867, 1243, 1516, 1618
Bsp1720I	GCTNAGC	1 cut(s)	134
Bsp19I	CCATGG	1 cut(s)	51
BspACI	CCGC	4 cut(s)	14, 17, 359, 1489
BspCNI	CTCAG	4 cut(s)	45, 126, 152, 1329
BspEI	TCCGGA	2 cut(s)	38, 830
BspLI	GGNNCC	2 cut(s)	551, 1487
BspMAI	CTGCAG	1 cut(s)	1611
BspMI	ACCTGC	2 cut(s)	537, 1614
BspPI	GGATC	3 cut(s)	133, 358, 1626
BspQI	GCTCTTC	1 cut(s)	829
BspT107I	GGYRCC	1 cut(s)	1485
BsrFI	RCCGGY	1 cut(s)	779
BsrI	ACTGG	3 cut(s)	457, 657, 1297
BssAI	RCCGGY	1 cut(s)	779
BssECI	CCNNGG	2 cut(s)	51, 273
BssMI	GATC	6 cut(s)	125, 350, 867, 1243, 1516, 1618
BssT1I	CCWWGG	2 cut(s)	51, 273
Bst2UI	CCWGG	2 cut(s)	1206, 1267
Bst4CI	ACNGT	2 cut(s)	874, 1404
Bst6I	CTCTTC	4 cut(s)	138, 683, 829, 1686
BstBAI	YACGTR	1 cut(s)	1253
BstC8I	GCNNGC	3 cut(s)	270, 781, 1355
BstDEI	CTNAG	6 cut(s)	32, 134, 139, 470, 921, 1316
BstDSI	CCRYGG	1 cut(s)	51
BstF5I	GGATG	4 cut(s)	322, 461, 982, 1491
BstH2I	RGCGCY	1 cut(s)	1532
BstHHI	GCGC	3 cut(s)	828, 1086, 1531
BstKTI	GATC	6 cut(s)	128, 353, 870, 1246, 1519, 1621
BstMAI	GTCTC	2 cut(s)	415, 758
BstMBI	GATC	6 cut(s)	125, 350, 867, 1243, 1516, 1618
BstNI	CCWGG	2 cut(s)	1206, 1267
BstNSI	RCATGY	3 cut(s)	585, 1357, 1417
BstSCI	CCNGG	3 cut(s)	757, 1204, 1265
BstSFI	CTRYAG	1 cut(s)	1607
BstSLI	GKGCMC	2 cut(s)	879, 1488
BstV1I	GCAGC	2 cut(s)	277, 1644
BstV2I	GAAGAC	2 cut(s)	173, 1107
BstX2I	RGATCY	2 cut(s)	125, 1618
BstYI	RGATCY	2 cut(s)	125, 1618
Bsu36I	CCTNAGG	1 cut(s)	470
BtgI	CCRYGG	1 cut(s)	51
BtgZI	GCGATG	1 cut(s)	603
BtsCI	GGATG	4 cut(s)	322, 461, 982, 1491
BtsI	GCAGTG	1 cut(s)	66
BtsIMutI	CAGTG	3 cut(s)	66, 870, 1169
BveI	ACCTGC	2 cut(s)	537, 1614
Cac8I	GCNNGC	3 cut(s)	270, 781, 1355
CfoI	GCGC	3 cut(s)	828, 1086, 1531
Cfr10I	RCCGGY	1 cut(s)	779
Cfr13I	GGNCC	1 cut(s)	549
Csp6I	GTAC	4 cut(s)	1167, 1254, 1473, 1563
CviAII	CATG	4 cut(s)	52, 582, 1354, 1414
CviQI	GTAC	4 cut(s)	1167, 1254, 1473, 1563
DdeI	CTNAG	6 cut(s)	32, 134, 139, 470, 921, 1316
DpnI	GATC	6 cut(s)	127, 352, 869, 1245, 1518, 1620
DpnII	GATC	6 cut(s)	125, 350, 867, 1243, 1516, 1618
DraI	TTTAAA	4 cut(s)	391, 846, 1512, 1542
Eam1104I	CTCTTC	4 cut(s)	138, 683, 829, 1686
EarI	CTCTTC	4 cut(s)	138, 683, 829, 1686
Ecl136II	GAGCTC	1 cut(s)	138
Eco130I	CCWWGG	2 cut(s)	51, 273
Eco24I	GRGCYC	1 cut(s)	140
Eco47I	GGWCC	1 cut(s)	549
Eco47III	AGCGCT	1 cut(s)	1530
Eco53kI	GAGCTC	1 cut(s)	138
Eco57I	CTGAAG	1 cut(s)	1523
Eco81I	CCTNAGG	1 cut(s)	470
EcoICRI	GAGCTC	1 cut(s)	138
EcoO109I	RGGNCCY	1 cut(s)	549
EcoRI	GAATTC	2 cut(s)	244, 695
EcoRII	CCWGG	2 cut(s)	1204, 1265
EcoT14I	CCWWGG	2 cut(s)	51, 273
EcoT38I	GRGCYC	1 cut(s)	140
ErhI	CCWWGG	2 cut(s)	51, 273
Esp3I	CGTCTC	1 cut(s)	415
FaeI	CATG	4 cut(s)	55, 585, 1357, 1417
FaqI	GGGAC	2 cut(s)	535, 741
FatI	CATG	4 cut(s)	51, 581, 1353, 1413
FauNDI	CATATG	1 cut(s)	1017
FbaI	TGATCA	1 cut(s)	867
FblI	GTMKAC	1 cut(s)	507
Fnu4HI	GCNGC	4 cut(s)	14, 17, 266, 1658
FokI	GGATG	4 cut(s)	309, 468, 989, 1478
FriOI	GRGCYC	1 cut(s)	140
Fsp4HI	GCNGC	4 cut(s)	14, 17, 266, 1658
FspBI	CTAG	2 cut(s)	1197, 1593
FspI	TGCGCA	1 cut(s)	1085
GlaI	GCGC	3 cut(s)	827, 1085, 1530
GluI	GCNGC	4 cut(s)	14, 17, 266, 1658
GsaI	CCCAGC	1 cut(s)	897
GsuI	CTGGAG	1 cut(s)	137
HaeII	RGCGCY	1 cut(s)	1532
HapII	CCGG	6 cut(s)	39, 759, 780, 831, 951, 1274
HhaI	GCGC	3 cut(s)	828, 1086, 1531
Hin1II	CATG	4 cut(s)	55, 585, 1357, 1417
Hin6I	GCGC	3 cut(s)	826, 1084, 1529
HinP1I	GCGC	3 cut(s)	826, 1084, 1529
HincII	GTYRAC	1 cut(s)	1400
HindII	GTYRAC	1 cut(s)	1400
HindIII	AAGCTT	3 cut(s)	209, 363, 923
HinfI	GANTC	7 cut(s)	203, 754, 1001, 1078, 1277, 1438, 1676
HpaII	CCGG	6 cut(s)	39, 759, 780, 831, 951, 1274
HphI	GGTGA	2 cut(s)	877, 880
Hpy166II	GTNNAC	5 cut(s)	332, 508, 1169, 1256, 1400
Hpy188I	TCNGA	7 cut(s)	142, 243, 338, 1000, 1068, 1319, 1590
Hpy8I	GTNNAC	5 cut(s)	332, 508, 1169, 1256, 1400
HpyAV	CCTTC	4 cut(s)	142, 806, 927, 1702
HpyCH4III	ACNGT	2 cut(s)	874, 1404
HpyCH4IV	ACGT	2 cut(s)	170, 1252
HpyCH4V	TGCA	9 cut(s)	189, 288, 322, 581, 966, 1357, 1536, 1609, 1660
HpyF3I	CTNAG	6 cut(s)	32, 134, 139, 470, 921, 1316
HpySE526I	ACGT	2 cut(s)	170, 1252
Hsp92II	CATG	4 cut(s)	55, 585, 1357, 1417
HspAI	GCGC	3 cut(s)	826, 1084, 1529
Kpn2I	TCCGGA	2 cut(s)	38, 830
KroI	GCCGGC	1 cut(s)	779
KroNI	GCCGGC	1 cut(s)	781
Ksp22I	TGATCA	1 cut(s)	867
Kzo9I	GATC	6 cut(s)	125, 350, 867, 1243, 1516, 1618
LguI	GCTCTTC	1 cut(s)	829
LmnI	GCTCC	5 cut(s)	262, 677, 833, 953, 1526
Lsp1109I	GCAGC	2 cut(s)	277, 1644
LweI	GCATC	4 cut(s)	331, 766, 1004, 1500
MaeI	CTAG	2 cut(s)	1197, 1593
MaeII	ACGT	2 cut(s)	170, 1252
MaeIII	GTNAC	5 cut(s)	44, 689, 886, 1299, 1409
MalI	GATC	6 cut(s)	127, 352, 869, 1245, 1518, 1620
MboI	GATC	6 cut(s)	125, 350, 867, 1243, 1516, 1618
MfeI	CAATTG	3 cut(s)	195, 719, 943
MflI	RGATCY	2 cut(s)	125, 1618
MhlI	GDGCHC	3 cut(s)	140, 879, 1488
MlyI	GAGTC	1 cut(s)	763
MmeI	TCCRAC	2 cut(s)	361, 1596
MroI	TCCGGA	2 cut(s)	38, 830
MroNI	GCCGGC	1 cut(s)	779
MslI	CAYNNNNRTG	1 cut(s)	327
MspI	CCGG	6 cut(s)	39, 759, 780, 831, 951, 1274
MspR9I	CCNGG	3 cut(s)	759, 1206, 1267
MunI	CAATTG	3 cut(s)	195, 719, 943
Mva1269I	GAATGC	1 cut(s)	290
MvaI	CCWGG	2 cut(s)	1206, 1267
NaeI	GCCGGC	1 cut(s)	781
NciI	CCSGG	1 cut(s)	759
NcoI	CCATGG	1 cut(s)	51
NdeI	CATATG	1 cut(s)	1017
NdeII	GATC	6 cut(s)	125, 350, 867, 1243, 1516, 1618
NgoMIV	GCCGGC	1 cut(s)	779
NlaIII	CATG	4 cut(s)	55, 585, 1357, 1417
NlaIV	GGNNCC	2 cut(s)	551, 1487
NmuCI	GTSAC	1 cut(s)	886
NsbI	TGCGCA	1 cut(s)	1085
NspI	RCATGY	3 cut(s)	585, 1357, 1417
PaeI	GCATGC	1 cut(s)	1357
PaqCI	CACCTGC	1 cut(s)	1614
PciSI	GCTCTTC	1 cut(s)	829
PctI	GAATGC	1 cut(s)	290
PdiI	GCCGGC	1 cut(s)	781
PfeI	GAWTC	6 cut(s)	203, 1001, 1078, 1277, 1438, 1676
PfoI	TCCNGGA	1 cut(s)	757
PkrI	GCNGC	4 cut(s)	15, 18, 267, 1659
PleI	GAGTC	1 cut(s)	762
PpsI	GAGTC	1 cut(s)	762
Ppu21I	YACGTR	1 cut(s)	1253
PpuMI	RGGWCCY	1 cut(s)	549
PshBI	ATTAAT	1 cut(s)	432
Psp124BI	GAGCTC	1 cut(s)	140
Psp5II	RGGWCCY	1 cut(s)	549
Psp6I	CCWGG	2 cut(s)	1204, 1265
PspFI	CCCAGC	1 cut(s)	893
PspGI	CCWGG	2 cut(s)	1204, 1265
PspN4I	GGNNCC	2 cut(s)	551, 1487
PspPI	GGNCC	1 cut(s)	549
PspPPI	RGGWCCY	1 cut(s)	549
PstI	CTGCAG	1 cut(s)	1611
PsuI	RGATCY	2 cut(s)	125, 1618
RsaI	GTAC	4 cut(s)	1168, 1255, 1474, 1564
RsaNI	GTAC	4 cut(s)	1167, 1254, 1473, 1563
RseI	CAYNNNNRTG	1 cut(s)	327
SacI	GAGCTC	1 cut(s)	140
SapI	GCTCTTC	1 cut(s)	829
SatI	GCNGC	4 cut(s)	14, 17, 266, 1658
Sau3AI	GATC	6 cut(s)	125, 350, 867, 1243, 1516, 1618
Sau96I	GGNCC	1 cut(s)	549
SchI	GAGTC	1 cut(s)	763
ScrFI	CCNGG	3 cut(s)	759, 1206, 1267
SduI	GDGCHC	3 cut(s)	140, 879, 1488
SfaNI	GCATC	4 cut(s)	331, 766, 1004, 1500
SfcI	CTRYAG	1 cut(s)	1607
SinI	GGWCC	1 cut(s)	549
SmiI	ATTTAAAT	1 cut(s)	1512
SmiMI	CAYNNNNRTG	1 cut(s)	327
SmlI	CTYRAG	1 cut(s)	732
SmoI	CTYRAG	1 cut(s)	732
SphI	GCATGC	1 cut(s)	1357
SsiI	CCGC	4 cut(s)	14, 17, 359, 1489
SspI	AATATT	1 cut(s)	962
SspMI	CTAG	2 cut(s)	1197, 1593
SstI	GAGCTC	1 cut(s)	140
StyD4I	CCNGG	3 cut(s)	757, 1204, 1265
StyI	CCWWGG	2 cut(s)	51, 273
SwaI	ATTTAAAT	1 cut(s)	1512
TaaI	ACNGT	2 cut(s)	874, 1404
TaiI	ACGT	2 cut(s)	173, 1255
TaqI	TCGA	5 cut(s)	100, 206, 312, 1383, 1684
TatI	WGTACW	1 cut(s)	1166
TauI	GCSGC	2 cut(s)	16, 19
TfiI	GAWTC	6 cut(s)	203, 1001, 1078, 1277, 1438, 1676
TscAI	CASTG	3 cut(s)	73, 877, 1176
TseFI	GTSAC	1 cut(s)	886
TseI	GCWGC	2 cut(s)	265, 1657
Tsp45I	GTSAC	1 cut(s)	886
TspDTI	ATGAA	7 cut(s)	17, 123, 537, 552, 606, 657, 1005
TspGWI	ACGGA	2 cut(s)	363, 1385
TspRI	CASTG	3 cut(s)	73, 877, 1176
VpaK11BI	GGWCC	1 cut(s)	549
VspI	ATTAAT	1 cut(s)	432
XapI	RAATTY	6 cut(s)	244, 524, 695, 1070, 1174, 1507
XbaI	TCTAGA	1 cut(s)	1196
XceI	RCATGY	3 cut(s)	585, 1357, 1417
XmiI	GTMKAC	1 cut(s)	507
XspI	CTAG	2 cut(s)	1197, 1593

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.