Rh6CG066700

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000546
Physical Location & Seq
Reverse (-)
6620651 .. 6623706
3056 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG066700.1

Sequence Viewer

Length: 2151 bp
ATGTCAACTTCTTCCAGGACTTCAAAGTCAACTTCTTCCTGGACTACAAAGCAGAACAAGTCATTTGAGAAGGCTCTGGCTCTGTATCACAAAGACACGCGAGACCGTTGGAAGAATGTGGCCAAGGCTGTTGGGGGAAAAACAGCAGAGGAAGTCCAGAAGCACTATGAGAATCTGGTGGAGGATATGGTGCATCTGGAATCTGGCAAAGCCCCTTTTCCCATGGACGAAGACACGCCAGACCGTCGGAAGAGTGTGGCCCAGGCTGTTGGGGGAAATACAGCGGAGCAAGTCCCAGGGCAGGGTGTGTTTCGGATGGAGGATATCGTGCATCGGAAATCTGGCAAAGCCCCTTTTCCCATGTACGAAGACACGCCAGACCGTCGGAAGAATGTGGCCAAGGCTGTTGGGGGAAACTGCGGTGTGTTCAATGTCGTCGGAAACAAATACATTGGAGGAATTGCTGATGAAAAGAGCAGGCATGCTGATGAAGATGCAGTCCAGGTAACAACTGAGGAAGACAAGACTTCGCCTGAACCTTTAATGGAAAGGCTATTTCTGTATTGTTCTCTCTTTCCATCAGGATATGAGTTTAAAAAGGATGAGTTGGTTCAAATGTGGATATCCGAAGGCCTAATTGTGGGAGAGAAGCCAGGAGAGACAATGGAGGATATTGGGATCGCTTATTTCAATACATTGGAGGCTACAGGCTTTTTGGTGCAGTCGAGATGGGATTTCAAAGTGGATTTTGATTCGGTTATATCGGTGCCCATGTATAGTTTTGGTAACTTTTTCTATAAAGTTAACTCTGTCAAATGCTCATCTTCCGAAAATGAAAGCTCTCGTGCCAGGTATTTCAGAGCTGTGGATGGTAAGCTAGATGGAGCCTTGGAATCAAAGACACAACATTTGTCTTTGACATATGAGGACATTGATGACATAACTTTTGGAGTTCTTCAAAAATTCAAGAATCTGCGCACACTACTTTTGCTCTCTGGTCATGGATCTTCCATGAACCGTGTTCATGGTAATTTGTTTTTGAGCTTAAGCTTCTTGAGAACATTGAATTTGAGTCGAACACTCATTTGTAGATTGCCAGGTTCCATAGGAGATGTAAGGCCTTTACGATATCTTGATGTCTCCTATACACCCATTACGCGATTGCCTGAATCAATAGGTTCACTTGACAAGTTACAGACCTTAAAACTTAGAGGTTGTAAACAGTTGTCTCAGTTACCAAAGAGCATGCACAGGCTAACCGCTGTACGACATATTGATCTTGATGTCATTCGGCAGTTGGATTTCATGCCTGCTTACTTGGGGAATTTGAGTGATCTTCAGACTTTGTCAGCATTTCTTGTTGGTAGAGATGATGGGCGTCGTATCCGAGAGTTGAAGAATTTAAATCATCTTAAGGGAGTACTTCAGATTTTTAGACTTGAAAATGTGTTGAGTAAGGCGGATGCTGAGGAAGCGAATTTGCCAAACAAGAAATACCTGCAGAGGTTGGATCTCAGATGGACTGATCTGATGATTGAGAATAAAAAGTTGCAAGAAGACGTCCTCAACTCTCTTCGACCCCATTCTGGCCTTAGAGAGTTACAGATACTGTTCTATAATGGGACAAAACTCCCAGCTTGGTTGAGCCATCCATCTTTTGCTGACCTTATGGTTGTTACCCTCTACAAGTGCACAAACTGTGAACTTCTCCCATCTATTGGTAAGTTGCCAACGCTTAAGTTCCTTTCTATTGTAGAGATGAATGCGGTGAAAGTAATTGATCAGACATTTTTTAGAAATACTGATGATCCCATTGATCAAGAGTTACAAGCATTTCCAAAACTTGAGATTCTAGAAGTTGACATCATGCTCAGTTTGAAAGAGTGGAAGGAAGTACGAGAAGGTGATTTACCGTCCCTACTTAAACTCACCGTGGAGTCTTGCCCAGAACTTGTTACTATTCCATCACTTTCAATCCTCAAATCCTTGAAGCAGTTAGAGTTTAGGCATTGCCCAAAGCTCTCGTCTCTGGACCATAGTGGACTACCAACTTCACTGGAGTCTTTAATAATAAGAGATTGCCCTCAACTGAAAGATTGGTGCTACAAGGAAGGAGATCAAGATTTGGGACAACATAGCTCATGTGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 ko04016 ko04075 ko04931 map04014 map04016 map04075 map04931
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

716

Amino Acids

81.02

Weight (kDa)

6.63

Isoelectric Point (pI)

42.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 191 - 240 1.4e-13 Disease resistance protein Winged helix domain
LRR_14 PF23598 369 - 643 5.6e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 462 - 587 1.3e-37 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000546)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700
malus_domestica MD14G1049300.v1.1
rosa_chinensis RchiOBHm_Chr4g0433201 RchiOBHm_Chr6g0255111 RchiOBHm_Chr7g0235301 RchiOBHm_Chr7g0235351 RchiOBHm_Chr7g0235361 RchiOBHm_Chr7g0235381
rosa_laevigata RLG00000001164 RLG00000013941
rosa_multiflora Rmu_co8331033.1_g000001 Rmu_co8369635.1_g000001 Rmu_sc0000957.1_g000010 Rmu_sc0003304.1_g000033 Rmu_sc0003304.1_g000041 Rmu_sc0003488.1_g000001 Rmu_sc0004529.1_g000036 Rmu_sc0004637.1_g000013 Rmu_sc0004657.1_g000070 Rmu_sc0004657.1_g000076 Rmu_sc0006578.1_g000004 Rmu_sc0011027.1_g000008 Rmu_sc0011027.1_g000010 Rmu_sc0013813.1_g000001 Rmu_sc0014112.1_g000001 Rmu_sc0014112.1_g000002 Rmu_sc0014112.1_g000004 Rmu_ssc0000011.1_g000040 Rmu_ssc0000295.1_g000011
rosa_roxburghii Rroxscaffold_2G00103040 Rroxscaffold_3G00226100 Rroxscaffold_3G00226120 Rroxscaffold_5G00374710 Rroxscaffold_5G00374720 Rroxscaffold_7G00200160 Rroxscaffold_7G00200190
rosa_rugosa Rorug05G0474400 Rorug05G0474400 Rorug06G0037400 Rorug06G0037500 Rorug06G0037600 Rorug06G0038300 Rorug06G0038300 Rorug06G0038400 Rorug06G0038500 Rorug07G0289800 Rorug07G0289900 Rorug07G0290000 Rorug07G0290000
rosa_samantha Rh4AG320500 Rh4AG320700 Rh4AG321100 Rh4DG324200 Rh4DG324700 Rh6BG067500 Rh6CG066600 Rh6CG066700 Rh6DG063600 Rh6DG063700 Rh6DG147600 Rh7AG444800 Rh7AG445000 Rh7BG416700 Rh7BG416800 Rh7CG465200 Rh7CG465300 Rh7CG465700 Rh7DG433600 Rh7DG433800
rosa_wichuraiana Rw0G008730 Rw0G008770 Rw4G027830 Rw7G036940 Rw7G036980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 25
AatII GACGTC 1 cut(s) 1563
Acc16I TGCGCA 1 cut(s) 977
Acc36I ACCTGC 1 cut(s) 1506
AccB1I GGYRCC 1 cut(s) 766
AccB7I CCANNNNNTGG 1 cut(s) 1718
AccII CGCG 2 cut(s) 100, 1159
AciI CCGC 5 cut(s) 284, 420, 1260, 1460, 1766
AclWI GGATC 4 cut(s) 686, 1012, 1518, 1802
AcoI YGGCCR 2 cut(s) 120, 396
AcsI RAATTY 5 cut(s) 962, 1066, 1324, 1399, 1477
AcuI CTGAAG 2 cut(s) 1322, 1409
AcyI GRCGYC 2 cut(s) 1378, 1560
AfaI GTAC 4 cut(s) 365, 1266, 1422, 1896
AfiI CCNNNNNNNGG 5 cut(s) 301, 302, 640, 1586, 1718
AflII CTTAAG 3 cut(s) 1045, 1412, 1736
AjnI CCWGG 8 cut(s) 14, 38, 261, 295, 501, 652, 848, 1096
AluBI AGCT 8 cut(s) 840, 863, 877, 1044, 1050, 1637, 2020, 2139
AluI AGCT 8 cut(s) 840, 863, 877, 1044, 1050, 1637, 2020, 2139
Alw21I GWGCWC 1 cut(s) 1694
Alw26I GTCTC 5 cut(s) 96, 653, 1144, 1233, 2031
Alw44I GTGCAC 1 cut(s) 1690
AlwI GGATC 4 cut(s) 686, 1012, 1518, 1802
AlwNI CAGNNNCTG 1 cut(s) 1609
AoxI GGCC 6 cut(s) 120, 258, 396, 631, 1118, 1588
ApaLI GTGCAC 1 cut(s) 1690
ApoI RAATTY 5 cut(s) 962, 1066, 1324, 1399, 1477
ArsI GACNNNNNNTTYG 6 cut(s) 892, 924, 929, 961, 2009, 2041
AspLEI GCGC 1 cut(s) 978
AspS9I GGNCC 2 cut(s) 259, 2032
AsuHPI GGTGA 3 cut(s) 1780, 1916, 1921
AvaII GGWCC 1 cut(s) 2032
BaeGI GKGCMC 2 cut(s) 771, 1694
BalI TGGCCA 2 cut(s) 122, 398
BanI GGYRCC 1 cut(s) 766
BarI GAAGNNNNNNTAC 2 cut(s) 1893, 1925
BauI CACGAG 1 cut(s) 843
BbsI GAAGAC 4 cut(s) 237, 375, 525, 1563
Bbv12I GWGCWC 1 cut(s) 1694
BbvCI CCTCAGC 1 cut(s) 1467
BciT130I CCWGG 8 cut(s) 16, 40, 263, 297, 503, 654, 850, 1098
BciVI GTATCC 1 cut(s) 1394
BclI TGATCA 2 cut(s) 1780, 1816
BcoDI GTCTC 5 cut(s) 96, 653, 1144, 1233, 2031
BfaI CTAG 3 cut(s) 878, 1853, 2149
BfmI CTRYAG 2 cut(s) 705, 1499
BfrI CTTAAG 3 cut(s) 1045, 1412, 1736
BfuAI ACCTGC 1 cut(s) 1506
BfuI GTATCC 1 cut(s) 1394
BmcAI AGTACT 1 cut(s) 1422
Bme1390I CCNGG 8 cut(s) 16, 40, 263, 297, 503, 654, 850, 1098
Bme18I GGWCC 1 cut(s) 2032
BmgT120I GGNCC 2 cut(s) 259, 2032
BmiI GGNNCC 3 cut(s) 768, 886, 1102
BmrFI CCNGG 8 cut(s) 16, 40, 263, 297, 503, 654, 850, 1098
BmsI GCATC 4 cut(s) 202, 340, 484, 1453
BpiI GAAGAC 4 cut(s) 237, 375, 525, 1563
BpmI CTGGAG 1 cut(s) 2078
Bpu10I CCTNAGC 1 cut(s) 1467
BpuEI CTTGAG 2 cut(s) 1075, 1865
BsaHI GRCGYC 2 cut(s) 1378, 1560
BsaI GGTCTC 1 cut(s) 96
BsaJI CCNNGG 8 cut(s) 123, 222, 261, 295, 296, 399, 888, 1932
Bsc4I CCNNNNNNNGG 5 cut(s) 301, 302, 640, 1586, 1718
Bse1I ACTGG 1 cut(s) 2061
Bse3DI GCAATG 1 cut(s) 2008
BseBI CCWGG 8 cut(s) 16, 40, 263, 297, 503, 654, 850, 1098
BseDI CCNNGG 8 cut(s) 123, 222, 261, 295, 296, 399, 888, 1932
BseGI GGATG 5 cut(s) 321, 607, 874, 1468, 1648
BseLI CCNNNNNNNGG 5 cut(s) 301, 302, 640, 1586, 1718
BseMI GCAATG 1 cut(s) 2008
BseMII CTCAG 5 cut(s) 504, 1244, 1458, 1528, 1885
BseNI ACTGG 1 cut(s) 2061
BseSI GKGCMC 2 cut(s) 771, 1694
BseYI CCCAGC 1 cut(s) 1633
BsgI GTGCAG 1 cut(s) 740
Bsh1236I CGCG 2 cut(s) 100, 1159
BshFI GGCC 6 cut(s) 122, 260, 398, 633, 1120, 1590
BshNI GGYRCC 1 cut(s) 766
BsiHKAI GWGCWC 1 cut(s) 1694
BslFI GGGAC 4 cut(s) 278, 1636, 1900, 2142
BslI CCNNNNNNNGG 5 cut(s) 301, 302, 640, 1586, 1718
BsmAI GTCTC 5 cut(s) 96, 653, 1144, 1233, 2031
BsmBI CGTCTC 1 cut(s) 2031
BsmFI GGGAC 4 cut(s) 278, 1636, 1900, 2142
BsmI GAATGC 1 cut(s) 1768
BsnI GGCC 6 cut(s) 122, 260, 398, 633, 1120, 1590
Bso31I GGTCTC 1 cut(s) 96
Bsp1286I GDGCHC 2 cut(s) 771, 1694
Bsp19I CCATGG 1 cut(s) 222
BspACI CCGC 5 cut(s) 284, 420, 1260, 1460, 1766
BspANI GGCC 6 cut(s) 122, 260, 398, 633, 1120, 1590
BspCNI CTCAG 5 cut(s) 505, 1243, 1459, 1527, 1884
BspFNI CGCG 2 cut(s) 100, 1159
BspLI GGNNCC 3 cut(s) 768, 886, 1102
BspMAI CTGCAG 1 cut(s) 1503
BspMI ACCTGC 1 cut(s) 1506
BspPI GGATC 4 cut(s) 686, 1012, 1518, 1802
BspT107I GGYRCC 1 cut(s) 766
BspTI CTTAAG 3 cut(s) 1045, 1412, 1736
BspTNI GGTCTC 1 cut(s) 96
BsrDI GCAATG 1 cut(s) 2008
BsrI ACTGG 1 cut(s) 2061
BssECI CCNNGG 8 cut(s) 123, 222, 261, 295, 296, 399, 888, 1932
BssNI GRCGYC 2 cut(s) 1378, 1560
BssSI CACGAG 1 cut(s) 843
BssT1I CCWWGG 4 cut(s) 123, 222, 399, 888
Bst2BI CACGAG 1 cut(s) 843
Bst2UI CCWGG 8 cut(s) 16, 40, 263, 297, 503, 654, 850, 1098
Bst4CI ACNGT 9 cut(s) 107, 245, 383, 1019, 1224, 1611, 1700, 1914, 1933
Bst6I CTCTTC 2 cut(s) 245, 1578
BstACI GRCGYC 2 cut(s) 1378, 1560
BstAFI CTTAAG 3 cut(s) 1045, 1412, 1736
BstC8I GCNNGC 4 cut(s) 479, 483, 1247, 1311
BstDEI CTNAG 7 cut(s) 513, 1208, 1230, 1467, 1514, 1592, 1871
BstDSI CCRYGG 2 cut(s) 222, 1932
BstF5I GGATG 5 cut(s) 321, 607, 874, 1468, 1648
BstFNI CGCG 2 cut(s) 100, 1159
BstHHI GCGC 1 cut(s) 978
BstMAI GTCTC 5 cut(s) 96, 653, 1144, 1233, 2031
BstMWI GCNNNNNNNGC 1 cut(s) 1472
BstNI CCWGG 8 cut(s) 16, 40, 263, 297, 503, 654, 850, 1098
BstNSI RCATGY 2 cut(s) 485, 1249
BstSCI CCNGG 8 cut(s) 14, 38, 261, 295, 501, 652, 848, 1096
BstSFI CTRYAG 2 cut(s) 705, 1499
BstSLI GKGCMC 2 cut(s) 771, 1694
BstUI CGCG 2 cut(s) 100, 1159
BstV2I GAAGAC 4 cut(s) 237, 375, 525, 1563
BstX2I RGATCY 2 cut(s) 1004, 1510
BstXI CCANNNNNNTGG 1 cut(s) 269
BstYI RGATCY 2 cut(s) 1004, 1510
BsuI GTATCC 1 cut(s) 1394
BsuRI GGCC 6 cut(s) 122, 260, 398, 633, 1120, 1590
BtgI CCRYGG 2 cut(s) 222, 1932
BtsCI GGATG 5 cut(s) 321, 607, 874, 1468, 1648
BtsIMutI CAGTG 1 cut(s) 2054
BveI ACCTGC 1 cut(s) 1506
Cac8I GCNNGC 4 cut(s) 479, 483, 1247, 1311
CaiI CAGNNNCTG 1 cut(s) 1609
CfoI GCGC 1 cut(s) 978
Cfr13I GGNCC 2 cut(s) 259, 2032
CseI GACGC 1 cut(s) 1367
Csp6I GTAC 4 cut(s) 364, 1265, 1421, 1895
CviQI GTAC 4 cut(s) 364, 1265, 1421, 1895
DdeI CTNAG 7 cut(s) 513, 1208, 1230, 1467, 1514, 1592, 1871
DraI TTTAAA 2 cut(s) 595, 1404
DrdI GACNNNNNNGTC 1 cut(s) 25
DseDI GACNNNNNNGTC 1 cut(s) 25
EaeI YGGCCR 2 cut(s) 120, 396
Eam1104I CTCTTC 2 cut(s) 245, 1578
EarI CTCTTC 2 cut(s) 245, 1578
EciI GGCGGA 1 cut(s) 1475
Eco130I CCWWGG 4 cut(s) 123, 222, 399, 888
Eco147I AGGCCT 2 cut(s) 633, 1120
Eco31I GGTCTC 1 cut(s) 96
Eco32I GATATC 3 cut(s) 325, 624, 1130
Eco47I GGWCC 1 cut(s) 2032
Eco57I CTGAAG 2 cut(s) 1322, 1409
EcoRII CCWGG 8 cut(s) 14, 38, 261, 295, 501, 652, 848, 1096
EcoRV GATATC 3 cut(s) 325, 624, 1130
EcoT14I CCWWGG 4 cut(s) 123, 222, 399, 888
ErhI CCWWGG 4 cut(s) 123, 222, 399, 888
Esp3I CGTCTC 1 cut(s) 2031
FaqI GGGAC 4 cut(s) 278, 1636, 1900, 2142
FauNDI CATATG 1 cut(s) 922
FbaI TGATCA 2 cut(s) 1780, 1816
FokI GGATG 5 cut(s) 328, 614, 881, 1475, 1635
FspBI CTAG 3 cut(s) 878, 1853, 2149
FspI TGCGCA 1 cut(s) 977
GlaI GCGC 1 cut(s) 977
GsaI CCCAGC 1 cut(s) 1637
GsuI CTGGAG 1 cut(s) 2078
HaeIII GGCC 6 cut(s) 122, 260, 398, 633, 1120, 1590
HgaI GACGC 1 cut(s) 1367
HhaI GCGC 1 cut(s) 978
Hin1I GRCGYC 2 cut(s) 1378, 1560
Hin6I GCGC 1 cut(s) 976
HinP1I GCGC 1 cut(s) 976
HincII GTYRAC 4 cut(s) 6, 30, 805, 1861
HindII GTYRAC 4 cut(s) 6, 30, 805, 1861
HindIII AAGCTT 1 cut(s) 1048
HpaI GTTAAC 1 cut(s) 805
HphI GGTGA 3 cut(s) 1780, 1916, 1921
Hpy166II GTNNAC 9 cut(s) 6, 30, 805, 1181, 1220, 1692, 1703, 1861, 2042
Hpy8I GTNNAC 9 cut(s) 6, 30, 805, 1181, 1220, 1692, 1703, 1861, 2042
Hpy99I CGWCG 4 cut(s) 249, 387, 440, 1383
HpyAV CCTTC 5 cut(s) 64, 623, 1882, 1895, 2105
HpyCH4III ACNGT 9 cut(s) 107, 245, 383, 1019, 1224, 1611, 1700, 1914, 1933
HpyCH4IV ACGT 1 cut(s) 1560
HpyCH4V TGCA 8 cut(s) 193, 331, 497, 721, 1249, 1501, 1552, 1692
HpyF10VI GCNNNNNNNGC 1 cut(s) 1472
HpyF3I CTNAG 7 cut(s) 513, 1208, 1230, 1467, 1514, 1592, 1871
HpySE526I ACGT 1 cut(s) 1560
Hsp92I GRCGYC 2 cut(s) 1378, 1560
HspAI GCGC 1 cut(s) 976
Ksp22I TGATCA 2 cut(s) 1780, 1816
KspAI GTTAAC 1 cut(s) 805
LmnI GCTCC 2 cut(s) 286, 884
LweI GCATC 4 cut(s) 202, 340, 484, 1453
MaeI CTAG 3 cut(s) 878, 1853, 2149
MaeII ACGT 1 cut(s) 1560
MaeIII GTNAC 8 cut(s) 505, 785, 1191, 1233, 1599, 1675, 1824, 1954
MflI RGATCY 2 cut(s) 1004, 1510
MhlI GDGCHC 2 cut(s) 771, 1694
MlsI TGGCCA 2 cut(s) 122, 398
MluCI AATT 9 cut(s) 459, 636, 962, 1030, 1066, 1324, 1399, 1477, 1776
MluNI TGGCCA 2 cut(s) 122, 398
MlyI GAGTC 3 cut(s) 1081, 1946, 2069
MmeI TCCRAC 6 cut(s) 89, 227, 365, 418, 1278, 1488
Mox20I TGGCCA 2 cut(s) 122, 398
MscI TGGCCA 2 cut(s) 122, 398
MslI CAYNNNNRTG 1 cut(s) 486
Msp20I TGGCCA 2 cut(s) 122, 398
MspA1I CMGCKG 2 cut(s) 284, 1262
MspCI CTTAAG 3 cut(s) 1045, 1412, 1736
MspR9I CCNGG 8 cut(s) 16, 40, 263, 297, 503, 654, 850, 1098
Mva1269I GAATGC 1 cut(s) 1768
MvaI CCWGG 8 cut(s) 16, 40, 263, 297, 503, 654, 850, 1098
MvnI CGCG 2 cut(s) 100, 1159
MwoI GCNNNNNNNGC 1 cut(s) 1472
NcoI CCATGG 1 cut(s) 222
NdeI CATATG 1 cut(s) 922
NlaIV GGNNCC 3 cut(s) 768, 886, 1102
NsbI TGCGCA 1 cut(s) 977
NspI RCATGY 2 cut(s) 485, 1249
PaeI GCATGC 2 cut(s) 485, 1249
PasI CCCWGGG 1 cut(s) 296
PceI AGGCCT 2 cut(s) 633, 1120
PctI GAATGC 1 cut(s) 1768
PfeI GAWTC 7 cut(s) 172, 200, 752, 893, 970, 1169, 1849
PflFI GACNNNGTC 1 cut(s) 1345
PflMI CCANNNNNTGG 1 cut(s) 1718
PfoI TCCNGGA 2 cut(s) 14, 38
PleI GAGTC 3 cut(s) 1080, 1945, 2068
PpsI GAGTC 3 cut(s) 1080, 1945, 2068
Psp6I CCWGG 8 cut(s) 14, 38, 261, 295, 501, 652, 848, 1096
PspFI CCCAGC 1 cut(s) 1633
PspGI CCWGG 8 cut(s) 14, 38, 261, 295, 501, 652, 848, 1096
PspN4I GGNNCC 3 cut(s) 768, 886, 1102
PspPI GGNCC 2 cut(s) 259, 2032
PstI CTGCAG 1 cut(s) 1503
PstNI CAGNNNCTG 1 cut(s) 1609
PsuI RGATCY 2 cut(s) 1004, 1510
PsyI GACNNNGTC 1 cut(s) 1345
RsaI GTAC 4 cut(s) 365, 1266, 1422, 1896
RsaNI GTAC 4 cut(s) 364, 1265, 1421, 1895
RseI CAYNNNNRTG 1 cut(s) 486
Sau96I GGNCC 2 cut(s) 259, 2032
ScaI AGTACT 1 cut(s) 1422
SchI GAGTC 3 cut(s) 1081, 1946, 2069
ScrFI CCNGG 8 cut(s) 16, 40, 263, 297, 503, 654, 850, 1098
SduI GDGCHC 2 cut(s) 771, 1694
SfaNI GCATC 4 cut(s) 202, 340, 484, 1453
SfcI CTRYAG 2 cut(s) 705, 1499
SinI GGWCC 1 cut(s) 2032
SmiI ATTTAAAT 1 cut(s) 1404
SmiMI CAYNNNNRTG 1 cut(s) 486
SmlI CTYRAG 5 cut(s) 1045, 1054, 1412, 1736, 1844
SmoI CTYRAG 5 cut(s) 1045, 1054, 1412, 1736, 1844
SphI GCATGC 2 cut(s) 485, 1249
Sse9I AATT 9 cut(s) 459, 636, 962, 1030, 1066, 1324, 1399, 1477, 1776
SseBI AGGCCT 2 cut(s) 633, 1120
SsiI CCGC 5 cut(s) 284, 420, 1260, 1460, 1766
SspMI CTAG 3 cut(s) 878, 1853, 2149
StuI AGGCCT 2 cut(s) 633, 1120
StyD4I CCNGG 8 cut(s) 14, 38, 261, 295, 501, 652, 848, 1096
StyI CCWWGG 4 cut(s) 123, 222, 399, 888
SwaI ATTTAAAT 1 cut(s) 1404
TaaI ACNGT 9 cut(s) 107, 245, 383, 1019, 1224, 1611, 1700, 1914, 1933
TaiI ACGT 1 cut(s) 1563
TaqI TCGA 3 cut(s) 725, 1075, 1576
TasI AATT 9 cut(s) 459, 636, 962, 1030, 1066, 1324, 1399, 1477, 1776
TatI WGTACW 1 cut(s) 1420
TfiI GAWTC 7 cut(s) 172, 200, 752, 893, 970, 1169, 1849
TscAI CASTG 1 cut(s) 2061
TspDTI ATGAA 7 cut(s) 483, 504, 849, 1013, 1028, 1294, 1775
TspRI CASTG 1 cut(s) 2061
Tth111I GACNNNGTC 1 cut(s) 1345
Van91I CCANNNNNTGG 1 cut(s) 1718
Vha464I CTTAAG 3 cut(s) 1045, 1412, 1736
VneI GTGCAC 1 cut(s) 1690
VpaK11BI GGWCC 1 cut(s) 2032
XapI RAATTY 5 cut(s) 962, 1066, 1324, 1399, 1477
XbaI TCTAGA 1 cut(s) 1852
XceI RCATGY 2 cut(s) 485, 1249
XspI CTAG 3 cut(s) 878, 1853, 2149
ZraI GACGTC 1 cut(s) 1561
ZrmI AGTACT 1 cut(s) 1422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.