Rroxscaffold_2G00103040

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000546
Physical Location & Seq
Forward (+)
25480284 .. 25488747
8464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00103040.1

Sequence Viewer

Length: 2352 bp
ATGATGTTCAACCCCTTTAAGTTATTGCGAAAAAGAAGTCGCATTCGGGCAGAGTTGACGGTGCCTTGTTTGTCTAGTTTGCATTCATTAACCAAACTGGATCTAAGTGACTGCAATCTTTCTGAAGAAGCAATGGCCAGTGGTTTTGGATGCTTGTCTTCATTAAGAGCATTAAATCTCAGCAGAAATCAATTCATTAGACTGCCCAAGAGCATCGGCCAACTCTCTAGACTTCAAGTACCCCTGTATGAAGGAATTTCCGATAAGGCAACTAAAGCGATGGATCCCAGGAAGACCCGACAGAAGCCAAAGTTGGTTAGGCGCAATGTGGTGAAGAACATTGACTATGATGCTGTTACATCGCCTTCCTCGCTCTACCAGCACTCCGTGGGGTCACCACTCTACTCAGGCTCGGTCAATATTTCAGACCGGATGACCTTCCAAGTAGAAGGAAACGACAGTGAGTTTGAACAGATACGCAAGAATTTGGGATTCTCCTGCCCTGAGTCCTTGGAGTTCCGCTCGACAAACTCGGAATTGAAGCCAAAGGAGAACTGCAATCGCAAAGAAATGGAAGAAGTAGAAATTGATAAAAGAGCTGATGAAGAAACTCATTTCAGAGCAGAGGAGTTTATAAACTTCAAACCAGGAGTATTACATAATAGCGCTTCTTCTTTTATGCATCCAAAACTGTTGGCAGTTGAGCCCGACTCGTTCATTCCCGTACAAACTTCTGGTGTCTCTCTGCGCTTGATCGGACAACTTCCTCGTAATTTTTTGTTGAACTTCAAGTTCTTGACGGCATTGCATCTTAGTCGAAAGCTGGGTTTTTATTTGCCAAGTTCAATTGGGGATGTAAAATCCTTACGATGTCTTGATGTCTCATACACACCAATCTCATGGTTGCCCGAATCAATAGGTTTACTTCACAAGTTACAGACCCTAAAACTCAGAAGTTGTAGAAACCTCGTTCAGTTGCCTGAATCAATTACTTCTCTTCATGAGTTACAGACCTTACATCTCAGAGGTTGTGTAAACCTTGTTGCTTTACCTGAGGGCATAAAGGTACTAATAAAGCTGCGTGATCTTGATGTTATTAACTGTCCGAACTTGAAACTCTCGGGGCAGCCAAATGAGAAGCTGATTTCTTCAGAAATAAATTTGTCAGGGTCATTGGAATTGAAGGAAAGCTATCCAAATTTGGAAGAAAAGGTTGTGCATGAAGATGAAGAATATGACAGTTTACCCAAACAATTAAAAAGGTTATTTCTGTATTGTTCTCTCTTTCCATCACATTATGAGTTTAGAAGAGATGAGTTGGTTCAAATGTGGATAGCTGAAGGCCTTATTGAAGAGATCCACGGAGGGATAATGGAGGATATTGGTGGTGAGTATTTCATGTCTTTGCAGAACAAAGGTTTTCTTGTGCCTTCAAGATGTGACTGCAGAGTGGATTTTGATTCGATATTTTCTGTGCCCATTTATAATCCTGGCCACTTATTGTATAAAGGAAATCCACTCAAGTTGTCACGTTTGGGAAGAACAATTGCTCCGGTTGAGTATTTCATAGCTGTGGATGGTAGGTTGGATGGAGCCTTGGAAATGACAGAGCATTTGTCTTTAATTTGCAAAGACATTGATGAGATGACTTTTGCAGTTCTTAAAAAATTTAAGCATTTGCGTACACTTCTTGTGCTTGCTGGTTGTGGATCTTCCATCAAATATGTTCCTCGTGATCTGTTTTTGAGCTTCAAGGAATTGAGAACACTGAATTTGAGTCAAACGCTCGTCTCTGAATTGCCAAGTTCCATTCGAAATGCAAAGTCATTACGATACCTTGATCTCTCCAATACTCTTATTACACGGTTGCCGGAATCAATAGATTCTCTTCACACTTTACAGACTGTAAGACTCAGAGGTTGTGTACACTTTCTTCAATTACCAAAGGGGATGAAGAAGCTAATCAATCTACGACATATCGATTTGGATATCATTCGACAGTTAAGGTCCATGCCTCCCCACTTGGGAAGCTTAACCAACCTTCAGACTTTGTCAGCATTTCTTGTTGGTCGAGATGATGGGTGCCGTATAGGAGAGCTTAAGAATTTGAATGATCTCAGAGGAGTACTTCGCATTTCGAGGCTTGAAAACGTGTCATGCCAGGAAGAGGCTAAGGCAGCTGCTTTGATCGAAAAGACATACCTGCAAAGGTTGGAGCTCCGCTGGAGTAATGTGTTTGCCGAGGATACAGAAGAGCAAGAGAAAATTCTTGAATGTCTGCAACCCCATGCTGGCCTTAAAAGAGCTACAAATACAACAATATGCCGGGTCAAGACTTCCAACTTGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 ko04016 ko04075 ko04931 map04014 map04016 map04075 map04931
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

783

Amino Acids

88.92

Weight (kDa)

8.61

Isoelectric Point (pI)

50.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 20 - 80 3.6e-07 Leucine-rich repeat region
LRR_14 PF23598 260 - 368 9.7e-15 Leucine-rich repeat region
WHD_DRP PF23559 428 - 476 2.4e-13 Disease resistance protein Winged helix domain
LRR_14 PF23598 544 - 743 1.7e-18 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 697 - 768 9.2e-18 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000546)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700
malus_domestica MD14G1049300.v1.1
rosa_chinensis RchiOBHm_Chr4g0433201 RchiOBHm_Chr6g0255111 RchiOBHm_Chr7g0235301 RchiOBHm_Chr7g0235351 RchiOBHm_Chr7g0235361 RchiOBHm_Chr7g0235381
rosa_laevigata RLG00000001164 RLG00000013941
rosa_multiflora Rmu_co8331033.1_g000001 Rmu_co8369635.1_g000001 Rmu_sc0000957.1_g000010 Rmu_sc0003304.1_g000033 Rmu_sc0003304.1_g000041 Rmu_sc0003488.1_g000001 Rmu_sc0004529.1_g000036 Rmu_sc0004637.1_g000013 Rmu_sc0004657.1_g000070 Rmu_sc0004657.1_g000076 Rmu_sc0006578.1_g000004 Rmu_sc0011027.1_g000008 Rmu_sc0011027.1_g000010 Rmu_sc0013813.1_g000001 Rmu_sc0014112.1_g000001 Rmu_sc0014112.1_g000002 Rmu_sc0014112.1_g000004 Rmu_ssc0000011.1_g000040 Rmu_ssc0000295.1_g000011
rosa_roxburghii Rroxscaffold_2G00103040 Rroxscaffold_3G00226100 Rroxscaffold_3G00226120 Rroxscaffold_5G00374710 Rroxscaffold_5G00374720 Rroxscaffold_7G00200160 Rroxscaffold_7G00200190
rosa_rugosa Rorug05G0474400 Rorug05G0474400 Rorug06G0037400 Rorug06G0037500 Rorug06G0037600 Rorug06G0038300 Rorug06G0038300 Rorug06G0038400 Rorug06G0038500 Rorug07G0289800 Rorug07G0289900 Rorug07G0290000 Rorug07G0290000
rosa_samantha Rh4AG320500 Rh4AG320700 Rh4AG321100 Rh4DG324200 Rh4DG324700 Rh6BG067500 Rh6CG066600 Rh6CG066700 Rh6DG063600 Rh6DG063700 Rh6DG147600 Rh7AG444800 Rh7AG445000 Rh7BG416700 Rh7BG416800 Rh7CG465200 Rh7CG465300 Rh7CG465700 Rh7DG433600 Rh7DG433800
rosa_wichuraiana Rw0G008730 Rw0G008770 Rw4G027830 Rw7G036940 Rw7G036980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 635, 1485
Acc36I ACCTGC 1 cut(s) 2211
AccB1I GGYRCC 2 cut(s) 61, 2082
AccBSI CCGCTC 1 cut(s) 522
AciI CCGC 2 cut(s) 520, 2221
AclWI GGATC 5 cut(s) 108, 278, 291, 1351, 1717
AcoI YGGCCR 3 cut(s) 135, 217, 1492
AcsI RAATTY 8 cut(s) 255, 484, 1159, 1198, 1667, 1771, 2104, 2265
AcuI CTGAAG 4 cut(s) 144, 1134, 1359, 2027
AdeI CACNNNGTG 1 cut(s) 388
AfaI GTAC 6 cut(s) 240, 726, 1068, 1684, 1926, 2127
AfeI AGCGCT 1 cut(s) 667
AfiI CCNNNNNNNGG 3 cut(s) 2024, 2167, 2291
AflII CTTAAG 1 cut(s) 2099
AflIII ACRYGT 1 cut(s) 2151
AjnI CCWGG 4 cut(s) 287, 646, 1489, 2160
AjuI GAANNNNNNNTTGG 2 cut(s) 296, 328
AloI GAACNNNNNNTCC 2 cut(s) 1534, 1566
Alw21I GWGCWC 1 cut(s) 2220
Alw26I GTCTC 3 cut(s) 745, 886, 1795
AlwI GGATC 5 cut(s) 108, 278, 291, 1351, 1717
Ama87I CYCGRG 1 cut(s) 1120
Aor51HI AGCGCT 1 cut(s) 667
AoxI GGCC 5 cut(s) 135, 217, 1342, 1492, 2293
ApeKI GCWGC 4 cut(s) 1078, 1126, 2177, 2180
ApoI RAATTY 8 cut(s) 255, 484, 1159, 1198, 1667, 1771, 2104, 2265
ArsI GACNNNNNNTTYG 6 cut(s) 22, 54, 449, 481, 1597, 1629
AspLEI GCGC 3 cut(s) 324, 668, 750
AspS9I GGNCC 1 cut(s) 2007
AsuC2I CCSGG 1 cut(s) 2327
AsuHPI GGTGA 3 cut(s) 343, 387, 1400
AsuII TTCGAA 1 cut(s) 1813
AvaI CYCGRG 1 cut(s) 1120
AvaII GGWCC 1 cut(s) 2007
AxyI CCTNAGG 1 cut(s) 1053
BaeGI GKGCMC 1 cut(s) 1479
BalI TGGCCA 2 cut(s) 137, 1494
BamHI GGATCC 1 cut(s) 283
BanI GGYRCC 2 cut(s) 61, 2082
BanII GRGCYC 2 cut(s) 708, 2220
BarI GAAGNNNNNNTAC 2 cut(s) 1917, 1949
BauI CACGAG 1 cut(s) 1731
BbsI GAAGAC 2 cut(s) 150, 299
Bbv12I GWGCWC 1 cut(s) 2220
BbvI GCAGC 4 cut(s) 1065, 1138, 2167, 2189
BccI CCATC 6 cut(s) 274, 1297, 1571, 1583, 1724, 2072
BceAI ACGGC 2 cut(s) 816, 2070
BcgI CGANNNNNNTGC 2 cut(s) 797, 831
BciT130I CCWGG 4 cut(s) 289, 648, 1491, 2162
BciVI GTATCC 1 cut(s) 2239
BcnI CCSGG 1 cut(s) 2327
BcoDI GTCTC 3 cut(s) 745, 886, 1795
BfaI CTAG 2 cut(s) 75, 228
BfmI CTRYAG 1 cut(s) 1444
BfoI RGCGCY 1 cut(s) 669
BfrI CTTAAG 1 cut(s) 2099
BfuAI ACCTGC 1 cut(s) 2211
BfuI GTATCC 1 cut(s) 2239
BisI GCNGC 4 cut(s) 1079, 1127, 2178, 2181
BlsI GCNGC 4 cut(s) 1080, 1128, 2179, 2182
BmcAI AGTACT 1 cut(s) 2127
Bme1390I CCNGG 5 cut(s) 289, 648, 1491, 2162, 2327
Bme18I GGWCC 1 cut(s) 2007
BmeT110I CYCGRG 1 cut(s) 1120
BmgT120I GGNCC 1 cut(s) 2007
BmiI GGNNCC 4 cut(s) 63, 285, 1594, 2084
BmrFI CCNGG 5 cut(s) 289, 648, 1491, 2162, 2327
BmsI GCATC 5 cut(s) 140, 222, 340, 691, 817
BpiI GAAGAC 2 cut(s) 150, 299
BplI GAGNNNNNCTC 4 cut(s) 506, 538, 695, 727
BpmI CTGGAG 1 cut(s) 2245
Bpu10I CCTNAGC 1 cut(s) 2172
Bpu14I TTCGAA 1 cut(s) 1813
BpuEI CTTGAG 1 cut(s) 1505
BpuMI CCSGG 1 cut(s) 2327
Bsa29I ATCGAT 1 cut(s) 1980
BsaJI CCNNGG 6 cut(s) 287, 387, 510, 1360, 1596, 2241
BsaWI WCCGGW 2 cut(s) 429, 1552
BsaXI ACNNNNNCTCC 4 cut(s) 368, 398, 1534, 1564
Bsc4I CCNNNNNNNGG 3 cut(s) 2024, 2167, 2291
Bse1I ACTGG 2 cut(s) 102, 138
Bse21I CCTNAGG 1 cut(s) 1053
Bse3DI GCAATG 3 cut(s) 138, 331, 803
BseBI CCWGG 4 cut(s) 289, 648, 1491, 2162
BseCI ATCGAT 1 cut(s) 1980
BseDI CCNNGG 6 cut(s) 287, 387, 510, 1360, 1596, 2241
BseGI GGATG 7 cut(s) 155, 438, 682, 859, 1582, 1594, 1956
BseLI CCNNNNNNNGG 3 cut(s) 2024, 2167, 2291
BseMI GCAATG 3 cut(s) 138, 331, 803
BseMII CTCAG 8 cut(s) 193, 420, 495, 964, 1036, 1044, 1927, 2131
BseNI ACTGG 2 cut(s) 102, 138
BseRI GAGGAG 2 cut(s) 641, 2136
BseSI GKGCMC 1 cut(s) 1479
BseXI GCAGC 4 cut(s) 1065, 1138, 2167, 2189
BseYI CCCAGC 1 cut(s) 823
BshFI GGCC 5 cut(s) 137, 219, 1344, 1494, 2295
BshNI GGYRCC 2 cut(s) 61, 2082
BshVI ATCGAT 1 cut(s) 1980
BsiHKAI GWGCWC 1 cut(s) 2220
BsiHKCI CYCGRG 1 cut(s) 1120
BsiSI CCGG 4 cut(s) 430, 1553, 1871, 2326
BslI CCNNNNNNNGG 3 cut(s) 2024, 2167, 2291
BsmAI GTCTC 3 cut(s) 745, 886, 1795
BsmBI CGTCTC 1 cut(s) 1795
BsmI GAATGC 2 cut(s) 42, 82
BsnI GGCC 5 cut(s) 137, 219, 1344, 1494, 2295
BsoBI CYCGRG 1 cut(s) 1120
Bsp119I TTCGAA 1 cut(s) 1813
Bsp1286I GDGCHC 3 cut(s) 708, 1479, 2220
Bsp1407I TGTACA 1 cut(s) 1924
BspACI CCGC 2 cut(s) 520, 2221
BspANI GGCC 5 cut(s) 137, 219, 1344, 1494, 2295
BspCNI CTCAG 8 cut(s) 192, 419, 496, 963, 1035, 1045, 1926, 2130
BspDI ATCGAT 1 cut(s) 1980
BspHI TCATGA 1 cut(s) 1000
BspLI GGNNCC 4 cut(s) 63, 285, 1594, 2084
BspMAI CTGCAG 1 cut(s) 1448
BspMI ACCTGC 1 cut(s) 2211
BspPI GGATC 5 cut(s) 108, 278, 291, 1351, 1717
BspQI GCTCTTC 1 cut(s) 2247
BspT104I TTCGAA 1 cut(s) 1813
BspT107I GGYRCC 2 cut(s) 61, 2082
BspTI CTTAAG 1 cut(s) 2099
BsrBI CCGCTC 1 cut(s) 522
BsrDI GCAATG 3 cut(s) 138, 331, 803
BsrGI TGTACA 1 cut(s) 1924
BsrI ACTGG 2 cut(s) 102, 138
BssECI CCNNGG 6 cut(s) 287, 387, 510, 1360, 1596, 2241
BssSI CACGAG 1 cut(s) 1731
BssT1I CCWWGG 2 cut(s) 510, 1596
Bst2BI CACGAG 1 cut(s) 1731
Bst2UI CCWGG 4 cut(s) 289, 648, 1491, 2162
Bst4CI ACNGT 8 cut(s) 61, 461, 693, 1103, 1241, 1866, 1906, 2001
Bst6I CTCTTC 6 cut(s) 1002, 1303, 1347, 1893, 2160, 2247
BstAFI CTTAAG 1 cut(s) 2099
BstAUI TGTACA 1 cut(s) 1924
BstBI TTCGAA 1 cut(s) 1813
BstC8I GCNNGC 2 cut(s) 1698, 2293
BstDSI CCRYGG 2 cut(s) 387, 1360
BstEII GGTNACC 1 cut(s) 393
BstF5I GGATG 7 cut(s) 155, 438, 682, 859, 1582, 1594, 1956
BstH2I RGCGCY 1 cut(s) 669
BstHHI GCGC 3 cut(s) 324, 668, 750
BstMAI GTCTC 3 cut(s) 745, 886, 1795
BstMWI GCNNNNNNNGC 4 cut(s) 275, 370, 379, 2177
BstNI CCWGG 4 cut(s) 289, 648, 1491, 2162
BstPI GGTNACC 1 cut(s) 393
BstSCI CCNGG 5 cut(s) 287, 646, 1489, 2160, 2325
BstSFI CTRYAG 1 cut(s) 1444
BstSLI GKGCMC 1 cut(s) 1479
BstV1I GCAGC 4 cut(s) 1065, 1138, 2167, 2189
BstV2I GAAGAC 2 cut(s) 150, 299
BstX2I RGATCY 4 cut(s) 100, 283, 1356, 1709
BstXI CCANNNNNNTGG 1 cut(s) 900
BstYI RGATCY 4 cut(s) 100, 283, 1356, 1709
Bsu15I ATCGAT 1 cut(s) 1980
Bsu36I CCTNAGG 1 cut(s) 1053
BsuI GTATCC 1 cut(s) 2239
BsuRI GGCC 5 cut(s) 137, 219, 1344, 1494, 2295
BsuTUI ATCGAT 1 cut(s) 1980
BtgI CCRYGG 2 cut(s) 387, 1360
BtgZI GCGATG 2 cut(s) 293, 345
BtsCI GGATG 7 cut(s) 155, 438, 682, 859, 1582, 1594, 1956
BtsIMutI CAGTG 3 cut(s) 145, 466, 1766
BveI ACCTGC 1 cut(s) 2211
Cac8I GCNNGC 2 cut(s) 1698, 2293
CciI TCATGA 1 cut(s) 1000
CfoI GCGC 3 cut(s) 324, 668, 750
Cfr13I GGNCC 1 cut(s) 2007
ClaI ATCGAT 1 cut(s) 1980
Csp6I GTAC 6 cut(s) 239, 725, 1067, 1683, 1925, 2126
CspCI CAANNNNNGTGG 2 cut(s) 1506, 1541
CviAII CATG 7 cut(s) 900, 1001, 1220, 1399, 2011, 2157, 2288
CviQI GTAC 6 cut(s) 239, 725, 1067, 1683, 1925, 2126
DraIII CACNNNGTG 1 cut(s) 388
EaeI YGGCCR 3 cut(s) 135, 217, 1492
Eam1104I CTCTTC 6 cut(s) 1002, 1303, 1347, 1893, 2160, 2247
EarI CTCTTC 6 cut(s) 1002, 1303, 1347, 1893, 2160, 2247
Ecl136II GAGCTC 1 cut(s) 2218
Eco130I CCWWGG 2 cut(s) 510, 1596
Eco147I AGGCCT 1 cut(s) 1344
Eco24I GRGCYC 2 cut(s) 708, 2220
Eco32I GATATC 1 cut(s) 1990
Eco47I GGWCC 1 cut(s) 2007
Eco47III AGCGCT 1 cut(s) 667
Eco53kI GAGCTC 1 cut(s) 2218
Eco57I CTGAAG 4 cut(s) 144, 1134, 1359, 2027
Eco81I CCTNAGG 1 cut(s) 1053
Eco88I CYCGRG 1 cut(s) 1120
Eco91I GGTNACC 1 cut(s) 393
EcoICRI GAGCTC 1 cut(s) 2218
EcoO65I GGTNACC 1 cut(s) 393
EcoRII CCWGG 4 cut(s) 287, 646, 1489, 2160
EcoRV GATATC 1 cut(s) 1990
EcoT14I CCWWGG 2 cut(s) 510, 1596
EcoT22I ATGCAT 1 cut(s) 684
EcoT38I GRGCYC 2 cut(s) 708, 2220
ErhI CCWWGG 2 cut(s) 510, 1596
Esp3I CGTCTC 1 cut(s) 1795
FaeI CATG 7 cut(s) 903, 1004, 1223, 1402, 2014, 2160, 2291
FalI AAGNNNNNCTT 2 cut(s) 1407, 1439
FatI CATG 7 cut(s) 899, 1000, 1219, 1398, 2010, 2156, 2287
Fnu4HI GCNGC 4 cut(s) 1079, 1127, 2178, 2181
FokI GGATG 7 cut(s) 162, 445, 669, 866, 1589, 1601, 1963
FriOI GRGCYC 2 cut(s) 708, 2220
Fsp4HI GCNGC 4 cut(s) 1079, 1127, 2178, 2181
FspBI CTAG 2 cut(s) 75, 228
GlaI GCGC 3 cut(s) 323, 667, 749
GluI GCNGC 4 cut(s) 1079, 1127, 2178, 2181
GsaI CCCAGC 1 cut(s) 827
GsuI CTGGAG 1 cut(s) 2245
HaeII RGCGCY 1 cut(s) 669
HaeIII GGCC 5 cut(s) 137, 219, 1344, 1494, 2295
HapII CCGG 4 cut(s) 430, 1553, 1871, 2326
HhaI GCGC 3 cut(s) 324, 668, 750
Hin1II CATG 7 cut(s) 903, 1004, 1223, 1402, 2014, 2160, 2291
Hin6I GCGC 3 cut(s) 322, 666, 748
HinP1I GCGC 3 cut(s) 322, 666, 748
HincII GTYRAC 1 cut(s) 57
HindII GTYRAC 1 cut(s) 57
HindIII AAGCTT 1 cut(s) 2029
HpaII CCGG 4 cut(s) 430, 1553, 1871, 2326
HphI GGTGA 3 cut(s) 343, 387, 1400
Hpy166II GTNNAC 7 cut(s) 57, 923, 1036, 1244, 1685, 1925, 1927
Hpy8I GTNNAC 7 cut(s) 57, 923, 1036, 1244, 1685, 1925, 1927
HpyAV CCTTC 8 cut(s) 245, 375, 443, 448, 1177, 1334, 1440, 2051
HpyCH4III ACNGT 8 cut(s) 61, 461, 693, 1103, 1241, 1866, 1906, 2001
HpyCH4IV ACGT 2 cut(s) 1531, 2151
HpyF10VI GCNNNNNNNGC 4 cut(s) 275, 370, 379, 2177
HpySE526I ACGT 2 cut(s) 1531, 2151
Hsp92II CATG 7 cut(s) 903, 1004, 1223, 1402, 2014, 2160, 2291
HspAI GCGC 3 cut(s) 322, 666, 748
LguI GCTCTTC 1 cut(s) 2247
LmnI GCTCC 4 cut(s) 1555, 1592, 2215, 2223
Lsp1109I GCAGC 4 cut(s) 1065, 1138, 2167, 2189
LweI GCATC 5 cut(s) 140, 222, 340, 691, 817
MaeI CTAG 2 cut(s) 75, 228
MaeII ACGT 2 cut(s) 1531, 2151
MaeIII GTNAC 7 cut(s) 107, 355, 393, 933, 1005, 1439, 1527
MbiI CCGCTC 1 cut(s) 522
MfeI CAATTG 2 cut(s) 846, 1545
MflI RGATCY 4 cut(s) 100, 283, 1356, 1709
MhlI GDGCHC 3 cut(s) 708, 1479, 2220
MlsI TGGCCA 2 cut(s) 137, 1494
MluNI TGGCCA 2 cut(s) 137, 1494
MlyI GAGTC 4 cut(s) 515, 704, 1786, 1905
MmeI TCCRAC 2 cut(s) 1566, 2193
Mox20I TGGCCA 2 cut(s) 137, 1494
Mph1103I ATGCAT 1 cut(s) 684
MscI TGGCCA 2 cut(s) 137, 1494
MslI CAYNNNNRTG 2 cut(s) 1224, 1571
Msp20I TGGCCA 2 cut(s) 137, 1494
MspA1I CMGCKG 2 cut(s) 2180, 2223
MspCI CTTAAG 1 cut(s) 2099
MspI CCGG 4 cut(s) 430, 1553, 1871, 2326
MspR9I CCNGG 5 cut(s) 289, 648, 1491, 2162, 2327
MunI CAATTG 2 cut(s) 846, 1545
Mva1269I GAATGC 2 cut(s) 42, 82
MvaI CCWGG 4 cut(s) 289, 648, 1491, 2162
MwoI GCNNNNNNNGC 4 cut(s) 275, 370, 379, 2177
NciI CCSGG 1 cut(s) 2327
NlaIII CATG 7 cut(s) 903, 1004, 1223, 1402, 2014, 2160, 2291
NlaIV GGNNCC 4 cut(s) 63, 285, 1594, 2084
NmeAIII GCCGAG 1 cut(s) 2266
NmuCI GTSAC 4 cut(s) 107, 393, 1439, 1527
NsiI ATGCAT 1 cut(s) 684
NspV TTCGAA 1 cut(s) 1813
PagI TCATGA 1 cut(s) 1000
PceI AGGCCT 1 cut(s) 1344
PciSI GCTCTTC 1 cut(s) 2247
PctI GAATGC 2 cut(s) 42, 82
PfeI GAWTC 6 cut(s) 492, 911, 983, 1460, 1874, 1883
PflFI GACNNNGTC 1 cut(s) 2050
PkrI GCNGC 4 cut(s) 1080, 1128, 2179, 2182
PleI GAGTC 4 cut(s) 514, 704, 1785, 1905
PpsI GAGTC 4 cut(s) 514, 704, 1785, 1905
PsiI TTATAA 2 cut(s) 635, 1485
Psp124BI GAGCTC 1 cut(s) 2220
Psp6I CCWGG 4 cut(s) 287, 646, 1489, 2160
PspEI GGTNACC 1 cut(s) 393
PspFI CCCAGC 1 cut(s) 823
PspGI CCWGG 4 cut(s) 287, 646, 1489, 2160
PspN4I GGNNCC 4 cut(s) 63, 285, 1594, 2084
PspPI GGNCC 1 cut(s) 2007
PstI CTGCAG 1 cut(s) 1448
PsuI RGATCY 4 cut(s) 100, 283, 1356, 1709
PsyI GACNNNGTC 1 cut(s) 2050
PvuII CAGCTG 1 cut(s) 2180
RsaI GTAC 6 cut(s) 240, 726, 1068, 1684, 1926, 2127
RsaNI GTAC 6 cut(s) 239, 725, 1067, 1683, 1925, 2126
RseI CAYNNNNRTG 2 cut(s) 1224, 1571
SacI GAGCTC 1 cut(s) 2220
SapI GCTCTTC 1 cut(s) 2247
SatI GCNGC 4 cut(s) 1079, 1127, 2178, 2181
Sau96I GGNCC 1 cut(s) 2007
ScaI AGTACT 1 cut(s) 2127
SchI GAGTC 4 cut(s) 515, 704, 1786, 1905
ScrFI CCNGG 5 cut(s) 289, 648, 1491, 2162, 2327
SduI GDGCHC 3 cut(s) 708, 1479, 2220
SfaNI GCATC 5 cut(s) 140, 222, 340, 691, 817
SfcI CTRYAG 1 cut(s) 1444
SfuI TTCGAA 1 cut(s) 1813
SinI GGWCC 1 cut(s) 2007
SmiMI CAYNNNNRTG 2 cut(s) 1224, 1571
SmlI CTYRAG 2 cut(s) 1520, 2099
SmoI CTYRAG 2 cut(s) 1520, 2099
SseBI AGGCCT 1 cut(s) 1344
SsiI CCGC 2 cut(s) 520, 2221
SspI AATATT 1 cut(s) 421
SspMI CTAG 2 cut(s) 75, 228
SstI GAGCTC 1 cut(s) 2220
StuI AGGCCT 1 cut(s) 1344
StyD4I CCNGG 5 cut(s) 287, 646, 1489, 2160, 2325
StyI CCWWGG 2 cut(s) 510, 1596
TaaI ACNGT 8 cut(s) 61, 461, 693, 1103, 1241, 1866, 1906, 2001
TaiI ACGT 2 cut(s) 1534, 2154
TaqI TCGA 9 cut(s) 524, 817, 1463, 1813, 1980, 1996, 2071, 2138, 2190
TaqII GACCGA 1 cut(s) 403
TatI WGTACW 2 cut(s) 1924, 2125
TfiI GAWTC 6 cut(s) 492, 911, 983, 1460, 1874, 1883
TscAI CASTG 3 cut(s) 145, 466, 1773
TseFI GTSAC 4 cut(s) 107, 393, 1439, 1527
TseI GCWGC 4 cut(s) 1078, 1126, 2177, 2180
Tsp45I GTSAC 4 cut(s) 107, 393, 1439, 1527
TspGWI ACGGA 2 cut(s) 376, 1377
TspRI CASTG 3 cut(s) 145, 466, 1773
Tth111I GACNNNGTC 1 cut(s) 2050
Vha464I CTTAAG 1 cut(s) 2099
VpaK11BI GGWCC 1 cut(s) 2007
XapI RAATTY 8 cut(s) 255, 484, 1159, 1198, 1667, 1771, 2104, 2265
XbaI TCTAGA 1 cut(s) 227
XspI CTAG 2 cut(s) 75, 228
ZrmI AGTACT 1 cut(s) 2127
Zsp2I ATGCAT 1 cut(s) 684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.