Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000957.1

Orthogroup ID

OG0000546

Physical Location & Seq

Genomic Coordinates Reverse (-)

56637 .. 62102

Gene Structure 5466 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000957.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3018 bp

atggaaagtccgcctgaggttgccgcagattctttctctgctggcaccagagagggagtaaaggatccaagtttggagcaaaagcttaggcaggttacagatgagcatgggattttgcctcaccatttgaaaaggttatttctgtattgttcactctttccttttggttatgaatttagaaaagatgagttggttcagttatggatagctgaaggctttattagagagaggcatggggagagaatggaagatattgctggcgagcattttaattccttggagaaggaagtcttctttgtgttttcaagatgtgatttcactatggattttgattcggtgctctcggatccgtcggataatcccagcaacttcttgtacaaagtaaatcctagcaagtattcattattggaagacaccatttcttcaggtaattatttcaaagcagtggatggtaaggtagacggagcctctgaaatgacgagacatttgtctttgattggtgaggatattgatgggatggcttttgggatccttcaaaactttaagcatttgcgcacactgcatatgctatcttgtcgtggatcttctatgaaacacgtccctcgtgatttgtgtttcaccttaacgttcttgaaaaccttaaatttgagtgggacattgatttctgagctgccgagttccattggaaatgtaaaatcattacgttatgtggatgcctcacatacacctatttcacggttacccgaatcaatagattctctttacaatttacaaaccattaagctcagaggctgctttcactttgttcagttgccaaaaggaatgaagaagctaaaaaagctccggcatattgatcttgacatcattcggcaattggattccatgcctgcacacctggggagcttgagtaatcttcaaactttgccagcatttcttgttggtagagatgatgggtgccgtcttggtgaattgaaaaatttgaatgatcttaaagggtcatttaacatttcaaggcttgaaaacgtgttgagtgaagaagaagctgaggaagctgccttgattgaaaagaaatgtatccacaggttggagcttcgatggagtgatatgtttgtcgagtattctcagcaagagaaaatactagaatatcttcaaccccattctggccttaaagagttacaaatacagcagtacagcgggtccatacttccaacttggattggcaatccctttttcactgaccttgttgtcattaccctctacagatgcagaaattgtaaacttctgccatgtatgggacaattaccagcacttaagtctctttctattatagaggtgaatgaggtgaaagaaattaatcatcaattcttcagaaaaggcctagctgatcatgcatttccaaaacttgagagactagaagttgacatcatgctcagtttgaaacagtggaaggatgtacaagtaggtgacttaccttccctagtgaaactcactctggactcttgcccagaacttgtcacacttcctgcacttttgtgcctcaaatccctcaagcacttggagctcaggtgctgcccaaagctcatggccttgcccactggtggactaccaacttcacttgagtttttcttgctattggattgccttgaactaaaaatgtggtgcttgaagtctgaacattggagcatgttatgtcatgtgcccagcatatggtttgatcatgaagagataaagggacgctgtggaatgacagaccagttggccttagcacgggtcggagctgtggctgcagaagcccgaacctatacccggatctcaactgaatattcatcctctttgtcagcagcacctgccccatctctgccacagcttccagcctttaattctaggacaatggaaccccaggatatgccatcaaaagtgctccacagtgtgctgctttacgggtcaaaacccctttatagcgcacttcctgcaaatgaaattccagagtggttcagcactaaatctaccagcactcccatatcaatcccaacaggggataacaagtggaagggagttgccgcatgtgctgttttctcagtccagggacatacgcctgcagatcttgacttttctaattactcgtatctaatcatactggaaaccgatgttgcgagcctggaaccatatgtgattaactgggaagaacaactccgcccccttggatcaagttctgatcttcttttaatttcctatgagcctagattgaagtttccaaagcgggcgttaaatcaatcaactgtggtgagggccatatttgaaaccaacaacccatacatggtggtccggaaatgtgggattcgtctagtctatgagcaagatgctggatggtttagtatcaacatatgccctggggtggagtcgatctatctgaataaagatgatgacgacgctgtactggagtctggctggcttagtcaagtggataaatgtctcaaatgggagaaattcattccacccttggaagaagactccacatttgggatgagaatgaacattcagtctgttctgccaagataccttgaggcattaaaccattgttccacagtgtataaatttaacatcacaggaagcccagcgtggtttaagcacttatttcgctttatcgataaattgccagctttatgctgggcttcttggccaatcaacatacctcagaatctaaacaagagtaagaagtggatgggatttgcaatatacgcatcaattgcagaggacctggggcatataatagaagacaaagatggcaaatatcgtgtttattttagattcgatatggggtgtaaatgtcatacgactgtgtcccaagaacttcagcaagtcaagtcgtcagaaaaacatgatcaacttttggagagagagagagaggagaagagaagagagaaggcggagttggtggtggcggtgagctcggttgcgtcgtcggagcacaattgcaatggaggtcaatgggaaatctgtggtagcagcacctgctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010035 GO:0010646 GO:0010648 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0022622 GO:0023051 GO:0023057 GO:0032501 GO:0032502 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0071704 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 ko04931 map04016 map04075 map04931

Pfam Domains

Protein Families

PP2C

Protein Analysis

1005

Amino Acids

114.08

Weight (kDa)

6.03

Isoelectric Point (pI)

44.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000546)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700
malus_domestica	MD14G1049300.v1.1
rosa_chinensis	RchiOBHm_Chr4g0433201 RchiOBHm_Chr6g0255111 RchiOBHm_Chr7g0235301 RchiOBHm_Chr7g0235351 RchiOBHm_Chr7g0235361 RchiOBHm_Chr7g0235381
rosa_laevigata	RLG00000001164 RLG00000013941
rosa_multiflora	Rmu_co8331033.1_g000001 Rmu_co8369635.1_g000001 Rmu_sc0000957.1_g000010 Rmu_sc0003304.1_g000033 Rmu_sc0003304.1_g000041 Rmu_sc0003488.1_g000001 Rmu_sc0004529.1_g000036 Rmu_sc0004637.1_g000013 Rmu_sc0004657.1_g000070 Rmu_sc0004657.1_g000076 Rmu_sc0006578.1_g000004 Rmu_sc0011027.1_g000008 Rmu_sc0011027.1_g000010 Rmu_sc0013813.1_g000001 Rmu_sc0014112.1_g000001 Rmu_sc0014112.1_g000002 Rmu_sc0014112.1_g000004 Rmu_ssc0000011.1_g000040 Rmu_ssc0000295.1_g000011
rosa_roxburghii	Rroxscaffold_2G00103040 Rroxscaffold_3G00226100 Rroxscaffold_3G00226120 Rroxscaffold_5G00374710 Rroxscaffold_5G00374720 Rroxscaffold_7G00200160 Rroxscaffold_7G00200190
rosa_rugosa	Rorug05G0474400 Rorug05G0474400 Rorug06G0037400 Rorug06G0037500 Rorug06G0037600 Rorug06G0038300 Rorug06G0038300 Rorug06G0038400 Rorug06G0038500 Rorug07G0289800 Rorug07G0289900 Rorug07G0290000 Rorug07G0290000
rosa_samantha	Rh4AG320500 Rh4AG320700 Rh4AG321100 Rh4DG324200 Rh4DG324700 Rh6BG067500 Rh6CG066600 Rh6CG066700 Rh6DG063600 Rh6DG063700 Rh6DG147600 Rh7AG444800 Rh7AG445000 Rh7BG416700 Rh7BG416800 Rh7CG465200 Rh7CG465300 Rh7CG465700 Rh7DG433600 Rh7DG433800
rosa_wichuraiana	Rw0G008730 Rw0G008770 Rw4G027830 Rw7G036940 Rw7G036980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1855
AasI	GACNNNNNNGTC	1 cut(s)	1244
Acc16I	TGCGCA	1 cut(s)	554
Acc36I	ACCTGC	2 cut(s)	82, 1855
AccB1I	GGYRCC	2 cut(s)	44, 954
AccB7I	CCANNNNNTGG	2 cut(s)	1084, 1707
AccI	GTMKAC	1 cut(s)	459
AccIII	TCCGGA	1 cut(s)	2325
AciI	CCGC	8 cut(s)	11, 24, 1194, 2061, 2194, 2260, 2927, 2942
AclI	AACGTT	1 cut(s)	626
AclWI	GGATC	9 cut(s)	59, 72, 341, 354, 523, 536, 589, 1817, 2212
AcoI	YGGCCR	1 cut(s)	2678
AcsI	RAATTY	6 cut(s)	173, 643, 976, 1980, 2486, 2594
AcuI	CTGAAG	4 cut(s)	231, 408, 1351, 2837
AdeI	CACNNNGTG	1 cut(s)	1930
AfaI	GTAC	4 cut(s)	377, 1190, 1455, 2436
AflII	CTTAAG	1 cut(s)	1310
AflIII	ACRYGT	2 cut(s)	595, 1023
AjiI	CACGTC	1 cut(s)	598
AjnI	CCWGG	6 cut(s)	894, 1899, 2082, 2157, 2389, 2757
AjuI	GAANNNNNNNTTGG	2 cut(s)	2915, 2947
AleI	CACNNNNGTG	1 cut(s)	1531
Alw21I	GWGCWC	5 cut(s)	342, 1563, 1923, 2951, 2970
Alw26I	GTCTC	4 cut(s)	475, 1320, 1402, 2477
AlwI	GGATC	9 cut(s)	59, 72, 341, 354, 523, 536, 589, 1817, 2212
AlwNI	CAGNNNCTG	4 cut(s)	792, 1569, 1847, 3012
Aor13HI	TCCGGA	1 cut(s)	2325
AoxI	GGCC	6 cut(s)	1162, 1375, 1584, 1758, 2289, 2678
ApeKI	GCWGC	8 cut(s)	670, 792, 1052, 1569, 1784, 1841, 1933, 3006
ApoI	RAATTY	6 cut(s)	173, 643, 976, 1980, 2486, 2594
ArsI	GACNNNNNNTTYG	4 cut(s)	469, 501, 2501, 2533
AseI	ATTAAT	1 cut(s)	1353
Asp700I	GAANNNNTTC	1 cut(s)	1146
AspLEI	GCGC	2 cut(s)	555, 1964
AspS9I	GGNCC	4 cut(s)	1197, 2289, 2323, 2755
AsuC2I	CCSGG	1 cut(s)	1807
AsuHPI	GGTGA	9 cut(s)	113, 512, 610, 977, 1345, 1354, 1475, 2296, 2956
AvaII	GGWCC	3 cut(s)	1197, 2323, 2755
AxyI	CCTNAGG	1 cut(s)	15
BaeGI	GKGCMC	1 cut(s)	1701
BalI	TGGCCA	1 cut(s)	2680
BamHI	GGATCC	3 cut(s)	64, 346, 528
BanI	GGYRCC	2 cut(s)	44, 954
BanII	GRGCYC	2 cut(s)	1563, 2951
BauI	CACGAG	1 cut(s)	603
BbsI	GAAGAC	4 cut(s)	283, 417, 2514, 2781
Bbv12I	GWGCWC	5 cut(s)	342, 1563, 1923, 2951, 2970
BbvCI	CCTCAGC	1 cut(s)	1044
BbvI	GCAGC	7 cut(s)	657, 779, 1039, 1556, 1771, 1853, 1920
BceAI	ACGGC	1 cut(s)	942
BcgI	CGANNNNNNTGC	2 cut(s)	2618, 2652
BciT130I	CCWGG	6 cut(s)	896, 1901, 2084, 2159, 2391, 2759
BciVI	GTATCC	1 cut(s)	1085
BclI	TGATCA	3 cut(s)	1384, 1714, 2881
BcnI	CCSGG	1 cut(s)	1807
BcoDI	GTCTC	4 cut(s)	475, 1320, 1402, 2477
BfaI	CTAG	8 cut(s)	390, 1139, 1379, 1412, 1478, 1884, 2241, 2345
BfmI	CTRYAG	3 cut(s)	1258, 1785, 2097
BfrI	CTTAAG	1 cut(s)	1310
BfuAI	ACCTGC	2 cut(s)	82, 1855
BfuI	GTATCC	1 cut(s)	1085
BglII	AGATCT	1 cut(s)	2101
Bme1390I	CCNGG	7 cut(s)	896, 1807, 1901, 2084, 2159, 2391, 2759
Bme18I	GGWCC	3 cut(s)	1197, 2323, 2755
BmgBI	CACGTC	1 cut(s)	598
BmgT120I	GGNCC	4 cut(s)	1197, 2289, 2323, 2755
BmiI	GGNNCC	9 cut(s)	46, 66, 348, 466, 530, 956, 1198, 1896, 2163
BmrFI	CCNGG	7 cut(s)	896, 1807, 1901, 2084, 2159, 2391, 2759
BmrI	ACTGGG	1 cut(s)	2188
BmsI	GCATC	4 cut(s)	703, 1253, 2350, 2750
BmuI	ACTGGG	1 cut(s)	2188
BoxI	GACNNNNGTC	1 cut(s)	487
BpiI	GAAGAC	4 cut(s)	283, 417, 2514, 2781
BpmI	CTGGAG	1 cut(s)	2459
Bpu10I	CCTNAGC	4 cut(s)	86, 1044, 1562, 1762
BpuEI	CTTGAG	5 cut(s)	925, 1424, 1532, 1637, 2582
BpuMI	CCSGG	1 cut(s)	1807
Bsa29I	ATCGAT	1 cut(s)	2646
BsaJI	CCNNGG	9 cut(s)	276, 895, 1899, 2083, 2200, 2389, 2390, 2499, 2758
BsaWI	WCCGGW	1 cut(s)	2325
BsaXI	ACNNNNNCTCC	6 cut(s)	892, 922, 1550, 1580, 1999, 2029
Bse1I	ACTGG	5 cut(s)	1600, 1753, 2142, 2183, 2442
Bse21I	CCTNAGG	1 cut(s)	15
Bse3DI	GCAATG	1 cut(s)	2983
BseAI	TCCGGA	1 cut(s)	2325
BseBI	CCWGG	6 cut(s)	896, 1901, 2084, 2159, 2391, 2759
BseCI	ATCGAT	1 cut(s)	2646
BseDI	CCNNGG	9 cut(s)	276, 895, 1899, 2083, 2200, 2389, 2390, 2499, 2758
BseGI	GGATG	8 cut(s)	454, 522, 718, 1456, 1826, 2372, 2529, 2727
BseMI	GCAATG	1 cut(s)	2983
BseMII	CTCAG	9 cut(s)	6, 657, 799, 1035, 1136, 1444, 1576, 2091, 2708
BseNI	ACTGG	5 cut(s)	1600, 1753, 2142, 2183, 2442
BseRI	GAGGAG	1 cut(s)	2921
BseSI	GKGCMC	1 cut(s)	1701
BseXI	GCAGC	7 cut(s)	657, 779, 1039, 1556, 1771, 1853, 1920
BseYI	CCCAGC	4 cut(s)	362, 1700, 2614, 2667
BsgI	GTGCAG	2 cut(s)	873, 1509
BshFI	GGCC	6 cut(s)	1164, 1377, 1586, 1760, 2291, 2680
BshNI	GGYRCC	2 cut(s)	44, 954
BshVI	ATCGAT	1 cut(s)	2646
BsiHKAI	GWGCWC	5 cut(s)	342, 1563, 1923, 2951, 2970
BsiSI	CCGG	3 cut(s)	844, 1807, 2326
BslFI	GGGAC	6 cut(s)	584, 667, 1308, 1746, 2100, 2827
BsmAI	GTCTC	4 cut(s)	475, 1320, 1402, 2477
BsmFI	GGGAC	6 cut(s)	584, 667, 1308, 1746, 2100, 2827
BsnI	GGCC	6 cut(s)	1164, 1377, 1586, 1760, 2291, 2680
Bsp1286I	GDGCHC	6 cut(s)	342, 1563, 1701, 1923, 2951, 2970
Bsp13I	TCCGGA	1 cut(s)	2325
Bsp1407I	TGTACA	2 cut(s)	375, 1453
BspACI	CCGC	8 cut(s)	11, 24, 1194, 2061, 2194, 2260, 2927, 2942
BspANI	GGCC	6 cut(s)	1164, 1377, 1586, 1760, 2291, 2680
BspCNI	CTCAG	9 cut(s)	7, 658, 798, 1036, 1135, 1443, 1575, 2090, 2707
BspDI	ATCGAT	1 cut(s)	2646
BspEI	TCCGGA	1 cut(s)	2325
BspHI	TCATGA	1 cut(s)	1717
BspLI	GGNNCC	9 cut(s)	46, 66, 348, 466, 530, 956, 1198, 1896, 2163
BspMAI	CTGCAG	2 cut(s)	1789, 2101
BspMI	ACCTGC	2 cut(s)	82, 1855
BspPI	GGATC	9 cut(s)	59, 72, 341, 354, 523, 536, 589, 1817, 2212
BspT107I	GGYRCC	2 cut(s)	44, 954
BspTI	CTTAAG	1 cut(s)	1310
BsrDI	GCAATG	1 cut(s)	2983
BsrGI	TGTACA	2 cut(s)	375, 1453
BsrI	ACTGG	5 cut(s)	1600, 1753, 2142, 2183, 2442
BssECI	CCNNGG	9 cut(s)	276, 895, 1899, 2083, 2200, 2389, 2390, 2499, 2758
BssSI	CACGAG	1 cut(s)	603
BssT1I	CCWWGG	3 cut(s)	276, 2200, 2499
Bst2BI	CACGAG	1 cut(s)	603
Bst2UI	CCWGG	6 cut(s)	896, 1901, 2084, 2159, 2391, 2759
Bst4CI	ACNGT	6 cut(s)	738, 1443, 1928, 2281, 2587, 2839
Bst6I	CTCTTC	3 cut(s)	1716, 2906, 2911
BstAFI	CTTAAG	1 cut(s)	1310
BstAPI	GCANNNNNTGC	4 cut(s)	1847, 1970, 2747, 3012
BstAUI	TGTACA	2 cut(s)	375, 1453
BstEII	GGTNACC	1 cut(s)	738
BstF5I	GGATG	8 cut(s)	454, 522, 718, 1456, 1826, 2372, 2529, 2727
BstHHI	GCGC	2 cut(s)	555, 1964
BstMAI	GTCTC	4 cut(s)	475, 1320, 1402, 2477
BstNI	CCWGG	6 cut(s)	896, 1901, 2084, 2159, 2391, 2759
BstNSI	RCATGY	2 cut(s)	1687, 2067
BstPAI	GACNNNNGTC	1 cut(s)	487
BstPI	GGTNACC	1 cut(s)	738
BstSCI	CCNGG	7 cut(s)	894, 1805, 1899, 2082, 2157, 2389, 2757
BstSFI	CTRYAG	3 cut(s)	1258, 1785, 2097
BstSLI	GKGCMC	1 cut(s)	1701
BstV1I	GCAGC	7 cut(s)	657, 779, 1039, 1556, 1771, 1853, 1920
BstV2I	GAAGAC	4 cut(s)	283, 417, 2514, 2781
BstX2I	RGATCY	6 cut(s)	64, 346, 528, 581, 1809, 2101
BstYI	RGATCY	6 cut(s)	64, 346, 528, 581, 1809, 2101
Bsu15I	ATCGAT	1 cut(s)	2646
Bsu36I	CCTNAGG	1 cut(s)	15
BsuI	GTATCC	1 cut(s)	1085
BsuRI	GGCC	6 cut(s)	1164, 1377, 1586, 1760, 2291, 2680
BsuTUI	ATCGAT	1 cut(s)	2646
BtrI	CACGTC	1 cut(s)	598
BtsCI	GGATG	8 cut(s)	454, 522, 718, 1456, 1826, 2372, 2529, 2727
BtsI	GCAGTG	2 cut(s)	450, 557
BtsIMutI	CAGTG	7 cut(s)	450, 557, 1233, 1448, 1593, 1933, 2592
BveI	ACCTGC	2 cut(s)	82, 1855
CaiI	CAGNNNCTG	4 cut(s)	792, 1569, 1847, 3012
CciI	TCATGA	1 cut(s)	1717
CfoI	GCGC	2 cut(s)	555, 1964
Cfr13I	GGNCC	4 cut(s)	1197, 2289, 2323, 2755
ClaI	ATCGAT	1 cut(s)	2646
CseI	GACGC	3 cut(s)	1743, 2438, 2946
Csp6I	GTAC	4 cut(s)	376, 1189, 1454, 2435
CviQI	GTAC	4 cut(s)	376, 1189, 1454, 2435
DraIII	CACNNNGTG	1 cut(s)	1930
DrdI	GACNNNNNNGTC	1 cut(s)	1244
DseDI	GACNNNNNNGTC	1 cut(s)	1244
EaeI	YGGCCR	1 cut(s)	2678
Eam1104I	CTCTTC	3 cut(s)	1716, 2906, 2911
EarI	CTCTTC	3 cut(s)	1716, 2906, 2911
EciI	GGCGGA	2 cut(s)	2183, 2942
Ecl136II	GAGCTC	2 cut(s)	1561, 2949
Eco130I	CCWWGG	3 cut(s)	276, 2200, 2499
Eco147I	AGGCCT	1 cut(s)	1377
Eco24I	GRGCYC	2 cut(s)	1563, 2951
Eco47I	GGWCC	3 cut(s)	1197, 2323, 2755
Eco53kI	GAGCTC	2 cut(s)	1561, 2949
Eco57I	CTGAAG	4 cut(s)	231, 408, 1351, 2837
Eco81I	CCTNAGG	1 cut(s)	15
Eco91I	GGTNACC	1 cut(s)	738
EcoICRI	GAGCTC	2 cut(s)	1561, 2949
EcoO109I	RGGNCCY	1 cut(s)	2755
EcoO65I	GGTNACC	1 cut(s)	738
EcoRII	CCWGG	6 cut(s)	894, 1899, 2082, 2157, 2389, 2757
EcoT14I	CCWWGG	3 cut(s)	276, 2200, 2499
EcoT22I	ATGCAT	1 cut(s)	1393
EcoT38I	GRGCYC	2 cut(s)	1563, 2951
ErhI	CCWWGG	3 cut(s)	276, 2200, 2499
FalI	AAGNNNNNCTT	2 cut(s)	275, 307
FaqI	GGGAC	6 cut(s)	584, 667, 1308, 1746, 2100, 2827
FauI	CCCGC	2 cut(s)	1187, 2253
FauNDI	CATATG	4 cut(s)	564, 1706, 2167, 2384
FbaI	TGATCA	3 cut(s)	1384, 1714, 2881
FblI	GTMKAC	1 cut(s)	459
FokI	GGATG	8 cut(s)	461, 529, 725, 1463, 1813, 2379, 2536, 2734
FriOI	GRGCYC	2 cut(s)	1563, 2951
FspBI	CTAG	8 cut(s)	390, 1139, 1379, 1412, 1478, 1884, 2241, 2345
FspI	TGCGCA	1 cut(s)	554
GlaI	GCGC	2 cut(s)	554, 1963
GsaI	CCCAGC	4 cut(s)	366, 1704, 2618, 2671
GsuI	CTGGAG	1 cut(s)	2459
HaeIII	GGCC	6 cut(s)	1164, 1377, 1586, 1760, 2291, 2680
HapII	CCGG	3 cut(s)	844, 1807, 2326
HgaI	GACGC	3 cut(s)	1743, 2438, 2946
HhaI	GCGC	2 cut(s)	555, 1964
Hin6I	GCGC	2 cut(s)	553, 1962
HinP1I	GCGC	2 cut(s)	553, 1962
HincII	GTYRAC	1 cut(s)	1420
HindII	GTYRAC	1 cut(s)	1420
HindIII	AAGCTT	1 cut(s)	83
HpaII	CCGG	3 cut(s)	844, 1807, 2326
HphI	GGTGA	9 cut(s)	113, 512, 610, 977, 1345, 1354, 1475, 2296, 2956
Hpy166II	GTNNAC	5 cut(s)	152, 460, 1277, 1420, 1601
Hpy188III	TCNNGA	9 cut(s)	306, 605, 631, 857, 1493, 1718, 1985, 2105, 2326
Hpy8I	GTNNAC	5 cut(s)	152, 460, 1277, 1420, 1601
Hpy99I	CGWCG	4 cut(s)	355, 2432, 2962, 2965
HpyAV	CCTTC	7 cut(s)	206, 277, 542, 1441, 1482, 2044, 2917
HpyCH4III	ACNGT	6 cut(s)	738, 1443, 1928, 2281, 2587, 2839
HpyCH4IV	ACGT	4 cut(s)	597, 626, 703, 1023
HpySE526I	ACGT	4 cut(s)	597, 626, 703, 1023
HspAI	GCGC	2 cut(s)	553, 1962
Kpn2I	TCCGGA	1 cut(s)	2325
Ksp22I	TGATCA	3 cut(s)	1384, 1714, 2881
Lsp1109I	GCAGC	7 cut(s)	657, 779, 1039, 1556, 1771, 1853, 1920
LweI	GCATC	4 cut(s)	703, 1253, 2350, 2750
MaeI	CTAG	8 cut(s)	390, 1139, 1379, 1412, 1478, 1884, 2241, 2345
MaeII	ACGT	4 cut(s)	597, 626, 703, 1023
MaeIII	GTNAC	5 cut(s)	94, 738, 1173, 1463, 1513
MfeI	CAATTG	3 cut(s)	872, 2745, 2971
MflI	RGATCY	6 cut(s)	64, 346, 528, 581, 1809, 2101
MhlI	GDGCHC	6 cut(s)	342, 1563, 1701, 1923, 2951, 2970
MlsI	TGGCCA	1 cut(s)	2680
MluNI	TGGCCA	1 cut(s)	2680
MlyI	GAGTC	4 cut(s)	1490, 2408, 2450, 2504
MmeI	TCCRAC	5 cut(s)	333, 1065, 1232, 1753, 2943
Mox20I	TGGCCA	1 cut(s)	2680
Mph1103I	ATGCAT	1 cut(s)	1393
MroI	TCCGGA	1 cut(s)	2325
MroXI	GAANNNNTTC	1 cut(s)	1146
MscI	TGGCCA	1 cut(s)	2680
MslI	CAYNNNNRTG	1 cut(s)	1531
Msp20I	TGGCCA	1 cut(s)	2680
MspA1I	CMGCKG	1 cut(s)	1194
MspCI	CTTAAG	1 cut(s)	1310
MspI	CCGG	3 cut(s)	844, 1807, 2326
MspR9I	CCNGG	7 cut(s)	896, 1807, 1901, 2084, 2159, 2391, 2759
MunI	CAATTG	3 cut(s)	872, 2745, 2971
MvaI	CCWGG	6 cut(s)	896, 1901, 2084, 2159, 2391, 2759
NciI	CCSGG	1 cut(s)	1807
NdeI	CATATG	4 cut(s)	564, 1706, 2167, 2384
NlaIV	GGNNCC	9 cut(s)	46, 66, 348, 466, 530, 956, 1198, 1896, 2163
NmeAIII	GCCGAG	1 cut(s)	699
NmuCI	GTSAC	2 cut(s)	1463, 1513
NsbI	TGCGCA	1 cut(s)	554
NsiI	ATGCAT	1 cut(s)	1393
NspI	RCATGY	2 cut(s)	1687, 2067
OliI	CACNNNNGTG	1 cut(s)	1531
PagI	TCATGA	1 cut(s)	1717
PaqCI	CACCTGC	1 cut(s)	1855
PasI	CCCWGGG	1 cut(s)	2390
PceI	AGGCCT	1 cut(s)	1377
PcsI	WCGNNNNNNNCGW	1 cut(s)	2957
PdmI	GAANNNNTTC	1 cut(s)	1146
PfeI	GAWTC	8 cut(s)	29, 332, 746, 755, 878, 2338, 2698, 2808
PflFI	GACNNNGTC	1 cut(s)	2839
PflMI	CCANNNNNTGG	2 cut(s)	1084, 1707
PleI	GAGTC	4 cut(s)	1490, 2407, 2449, 2504
PpsI	GAGTC	4 cut(s)	1490, 2407, 2449, 2504
PpuMI	RGGWCCY	1 cut(s)	2755
PshAI	GACNNNNGTC	1 cut(s)	487
PshBI	ATTAAT	1 cut(s)	1353
Psp124BI	GAGCTC	2 cut(s)	1563, 2951
Psp1406I	AACGTT	1 cut(s)	626
Psp5II	RGGWCCY	1 cut(s)	2755
Psp6I	CCWGG	6 cut(s)	894, 1899, 2082, 2157, 2389, 2757
PspEI	GGTNACC	1 cut(s)	738
PspFI	CCCAGC	4 cut(s)	362, 1700, 2614, 2667
PspGI	CCWGG	6 cut(s)	894, 1899, 2082, 2157, 2389, 2757
PspN4I	GGNNCC	9 cut(s)	46, 66, 348, 466, 530, 956, 1198, 1896, 2163
PspPI	GGNCC	4 cut(s)	1197, 2289, 2323, 2755
PspPPI	RGGWCCY	1 cut(s)	2755
PstI	CTGCAG	2 cut(s)	1789, 2101
PstNI	CAGNNNCTG	4 cut(s)	792, 1569, 1847, 3012
PsuI	RGATCY	6 cut(s)	64, 346, 528, 581, 1809, 2101
PsyI	GACNNNGTC	1 cut(s)	2839
RsaI	GTAC	4 cut(s)	377, 1190, 1455, 2436
RsaNI	GTAC	4 cut(s)	376, 1189, 1454, 2435
RseI	CAYNNNNRTG	1 cut(s)	1531
SacI	GAGCTC	2 cut(s)	1563, 2951
Sau96I	GGNCC	4 cut(s)	1197, 2289, 2323, 2755
SchI	GAGTC	4 cut(s)	1490, 2408, 2450, 2504
ScrFI	CCNGG	7 cut(s)	896, 1807, 1901, 2084, 2159, 2391, 2759
SduI	GDGCHC	6 cut(s)	342, 1563, 1701, 1923, 2951, 2970
SfaNI	GCATC	4 cut(s)	703, 1253, 2350, 2750
SfcI	CTRYAG	3 cut(s)	1258, 1785, 2097
SinI	GGWCC	3 cut(s)	1197, 2323, 2755
SmiMI	CAYNNNNRTG	1 cut(s)	1531
SmlI	CTYRAG	6 cut(s)	904, 1310, 1403, 1547, 1616, 2561
SmoI	CTYRAG	6 cut(s)	904, 1310, 1403, 1547, 1616, 2561
SseBI	AGGCCT	1 cut(s)	1377
SsiI	CCGC	8 cut(s)	11, 24, 1194, 2061, 2194, 2260, 2927, 2942
SspI	AATATT	1 cut(s)	1823
SspMI	CTAG	8 cut(s)	390, 1139, 1379, 1412, 1478, 1884, 2241, 2345
SstI	GAGCTC	2 cut(s)	1563, 2951
StuI	AGGCCT	1 cut(s)	1377
StyD4I	CCNGG	7 cut(s)	894, 1805, 1899, 2082, 2157, 2389, 2757
StyI	CCWWGG	3 cut(s)	276, 2200, 2499
TaaI	ACNGT	6 cut(s)	738, 1443, 1928, 2281, 2587, 2839
TaiI	ACGT	4 cut(s)	600, 629, 706, 1026
TaqI	TCGA	5 cut(s)	1093, 1113, 2402, 2646, 2811
TatI	WGTACW	4 cut(s)	375, 1188, 1453, 2434
TauI	GCSGC	2 cut(s)	26, 2063
TfiI	GAWTC	8 cut(s)	29, 332, 746, 755, 878, 2338, 2698, 2808
TscAI	CASTG	7 cut(s)	450, 564, 1240, 1448, 1600, 1933, 2592
TseFI	GTSAC	2 cut(s)	1463, 1513
TseI	GCWGC	8 cut(s)	670, 792, 1052, 1569, 1784, 1841, 1933, 3006
Tsp45I	GTSAC	2 cut(s)	1463, 1513
TspDTI	ATGAA	9 cut(s)	186, 390, 605, 839, 1734, 1815, 1992, 2479, 2546
TspGWI	ACGGA	2 cut(s)	339, 477
TspRI	CASTG	7 cut(s)	450, 564, 1240, 1448, 1600, 1933, 2592
Tth111I	GACNNNGTC	1 cut(s)	2839
Van91I	CCANNNNNTGG	2 cut(s)	1084, 1707
Vha464I	CTTAAG	1 cut(s)	1310
VpaK11BI	GGWCC	3 cut(s)	1197, 2323, 2755
VspI	ATTAAT	1 cut(s)	1353
XapI	RAATTY	6 cut(s)	173, 643, 976, 1980, 2486, 2594
XceI	RCATGY	2 cut(s)	1687, 2067
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2664
XmiI	GTMKAC	1 cut(s)	459
XmnI	GAANNNNTTC	1 cut(s)	1146
XspI	CTAG	8 cut(s)	390, 1139, 1379, 1412, 1478, 1884, 2241, 2345
Zsp2I	ATGCAT	1 cut(s)	1393

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.