Rh7CG465300

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000546
Physical Location & Seq
Forward (+)
62189351 .. 62192995
3645 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG465300.1

Sequence Viewer

Length: 2598 bp
ATGGATCCCAGCTGGAAGACCCGACAGAAGCCAAAGTTGGTTAGGCGCAATGCGGTGAAGAACATTGACTATGATGCCGTTACATCGCCTTCCTCGCTCTACCACCACTCCGCAGGGTCACCACTCGACTCAGGCTCGGTCAATATTTCAGACCAGACGAGCTTCCAAGTAGAAGGAAACGACAGTGAGTTCGAACAGATATGCATGAATTTGGGATTCTCAGGCCCTGAGTCCTTGGAGTTCCGCTCGACGAACTCGGAATTGAAGCTAAACGAGAACTGCAATCGCAAAGAAATGGAAGAATTAGAAATTGATAAAAGAGCAGATGAAGAAACTAATTTGAGAGCAGAAGAATTTATAAACTTCAAACCAGGAGTATTACATAATAGCGCTTGTTCTTTTATGCATCCAAAACTGTTGGCAATTGAGCCCGACTCTTTCATTCCATTACAAACTTCTGGTGTCTCTCTGCGCTTGATCGGACAACTTCCTCGTAATTTTTTGTTGAACTTCAAGTTCTTGACTGCATTGCAACTTAGTCGAAAGCTGGATTTTGATTTGCCAAGTTCAATTGGGGATGTAAAATCCTTGCGATGTCTTGATGTCTCATATACACCAATCTCATGGTTGCCCGAATCAATAGGTTTACTTCACAAGTTACAGACCCTAAAACTCAGAAGTTGTAGAAACCTCTTTCAGTTGCCTGAATCATTTACTTCTCTTCATGAGTTACAGACCTTACATCTCAGAGGTTGTGTAAACCTTGTTGCTTTACCTAAGGGAATAAAGGTACTAATAAAGCTGCATGATCTTGATGTTATGAACTGTCCGAACTTGAAACTTTCGGAGGAGCCAAATGAGAAGCTGATTTCTTCAGAAATAAATTTGTCAGAGTCATTGGAAGAAAAGGTTATGCATGAAGATGAAGAATATGACAGTTTACCCGAACAATTAAAAAGGTTATTTCTGTATTGTTCTCTCTTTCCATCACATTATGAGTTTAGAAGAGATGAGTTGGTTCAAATGTGGATAGCTGAAGGCCTTATTGAGGAGATCCACGGAGGGGTAATGGAGGATATTGGTGGTGAGTATTTCATGTCTTTGCAGAACAAAGGTTTTCTTGTGCCTTCAAGATGTGACTACAGAGTGGATTTTGATTCGGTATTTTCTGTGCCCATTTATAATCCTGGCCACTTATTGTATAAAGGAAATCCACTCAAGTTTTCACGTTTGGGAAGAACAATTGCTCCGGTTGAGTATTTCGTAGCTGTGGATGGTAAGTTGGATGGAGCCTTGGAAATGACACAGCATTTGTCTTTAATTTGCAAGGACATTGATGAGATGACTTTTGGGGTTCTTAAAAAATTTAAGCATTTGCGTACACTTCTTGTGCTTGCTGGTTGTGGATCTTCCATCAAATATGTTCCTCGTGATCTGTTTTTGAGCTTCAAGGAACTAAGAACACTGAATTTGAGTCAAACACTCGTCTCTGAATTGCCAAGTTCCATTCGAAACGCAAAGTCATTACGATACCTTGATCTCTCCAATACTCTTATTACACGGCTGCCGGAATCGATAGATTCTCTTCACACTTTACAGACTGTAAGACTCAGAGGTTGTGTACACTTTCTTGAATTACCAAAGGGGATGAAGAAGCTAGTCAATCTACGACATATCGATTTGGATATCATTCGACAGTTAAGGTCCATGCCTCCCCACTTGGGAAGCTTAACCAACCTTCAGACTTTGTCAGCGTTTCTTGTTGGTCGAGATGCAGGGTGCCGTATAGGAGAGCTTAAGAATTTGAATGATCTCAGAGGAGTACTTCGCATTTCAAGGCTTGAAAACGTGTCATGCCAGGAAGAGGCTAAGGCAGCTGCTTTGATCGAAAAGATATACCTGCAAAGGTTGGAGCTCCGCTGGAGTATTGTGTTCGATGAGATCACAGAAGAGCAAGAGAAAATTCTTGAATGTCTTCAACCCCATGCTGGCCTTAAAGAGCTACAAATACAACAATATGCCGGGTCAAGACTTCCAACTTGGATTAGCAATCCATGTTTTGCTGAACTTATTGTTCTTACTCTCTACAGATGCAAAAACTGTGAGCTTCTCCCATCTATTGGGCAGTTACCAATGCTAAAGTCTCTTTCTATTATAGAAATGAATGAGGTAAAAGAAATCAACTACCAGTTTTTGGGAAAGAAAAACCCAGTTGATCAAGGGTTTCATGCATTTTCAAAACTGGAGATACTAGAAGTTGACATCATGCTCAATTTGAAACTGTGGAAGGATGTAAACATTGGTGACTTACCTTCCTTACTTAAACTCACGGTTGATTCTTGCCCTGAACTTACCACTCTCCCATCACTCTCTTGGCTCAAATCCCTCAAGCATTTGGAACTCAGGCGCTGTCCAAAAATTCTGAACTGGCCTTGTGATGGACTACCAGCATCACTTGAGTCTTTCATAGTAATAGATTGCCCGGAACTGAAAGAATGGTGCCACATGATGGAAGGTGAAGATTGGAGGAAGATATGCCATCTTCCTAGCATATGGCTTGATTGTGAAGAGGTATCCAAGTCCCAGAATATGGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 ko04016 ko04075 ko04931 map04014 map04016 map04075 map04931
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

865

Amino Acids

98.78

Weight (kDa)

5.83

Isoelectric Point (pI)

52.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 168 - 276 1.7e-13 Leucine-rich repeat region
WHD_DRP PF23559 327 - 375 1.9e-13 Disease resistance protein Winged helix domain
LRR_14 PF23598 505 - 754 3.2e-24 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 596 - 721 4.1e-38 R13L1/DRL21 LRRs
LRR_RPS2 PF23247 682 - 800 1.3e-07 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000546)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700
malus_domestica MD14G1049300.v1.1
rosa_chinensis RchiOBHm_Chr4g0433201 RchiOBHm_Chr6g0255111 RchiOBHm_Chr7g0235301 RchiOBHm_Chr7g0235351 RchiOBHm_Chr7g0235361 RchiOBHm_Chr7g0235381
rosa_laevigata RLG00000001164 RLG00000013941
rosa_multiflora Rmu_co8331033.1_g000001 Rmu_co8369635.1_g000001 Rmu_sc0000957.1_g000010 Rmu_sc0003304.1_g000033 Rmu_sc0003304.1_g000041 Rmu_sc0003488.1_g000001 Rmu_sc0004529.1_g000036 Rmu_sc0004637.1_g000013 Rmu_sc0004657.1_g000070 Rmu_sc0004657.1_g000076 Rmu_sc0006578.1_g000004 Rmu_sc0011027.1_g000008 Rmu_sc0011027.1_g000010 Rmu_sc0013813.1_g000001 Rmu_sc0014112.1_g000001 Rmu_sc0014112.1_g000002 Rmu_sc0014112.1_g000004 Rmu_ssc0000011.1_g000040 Rmu_ssc0000295.1_g000011
rosa_roxburghii Rroxscaffold_2G00103040 Rroxscaffold_3G00226100 Rroxscaffold_3G00226120 Rroxscaffold_5G00374710 Rroxscaffold_5G00374720 Rroxscaffold_7G00200160 Rroxscaffold_7G00200190
rosa_rugosa Rorug05G0474400 Rorug05G0474400 Rorug06G0037400 Rorug06G0037500 Rorug06G0037600 Rorug06G0038300 Rorug06G0038300 Rorug06G0038400 Rorug06G0038500 Rorug07G0289800 Rorug07G0289900 Rorug07G0290000 Rorug07G0290000
rosa_samantha Rh4AG320500 Rh4AG320700 Rh4AG321100 Rh4DG324200 Rh4DG324700 Rh6BG067500 Rh6CG066600 Rh6CG066700 Rh6DG063600 Rh6DG063700 Rh6DG147600 Rh7AG444800 Rh7AG445000 Rh7BG416700 Rh7BG416800 Rh7CG465200 Rh7CG465300 Rh7CG465700 Rh7DG433600 Rh7DG433800
rosa_wichuraiana Rw0G008730 Rw0G008770 Rw4G027830 Rw7G036940 Rw7G036980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 359, 1182
Acc36I ACCTGC 1 cut(s) 1908
AccB1I GGYRCC 2 cut(s) 1779, 2499
AccB7I CCANNNNNTGG 4 cut(s) 2120, 2194, 2509, 2590
AccBSI CCGCTC 1 cut(s) 246
AciI CCGC 4 cut(s) 53, 111, 244, 1918
AclWI GGATC 3 cut(s) 12, 1048, 1414
AcoI YGGCCR 1 cut(s) 1189
AcsI RAATTY 8 cut(s) 208, 353, 883, 1364, 1468, 1801, 1962, 2418
AcuI CTGAAG 3 cut(s) 858, 1056, 1724
AfaI GTAC 4 cut(s) 792, 1381, 1623, 1824
AfeI AGCGCT 1 cut(s) 391
AflII CTTAAG 1 cut(s) 1796
AflIII ACRYGT 1 cut(s) 1848
AjnI CCWGG 3 cut(s) 370, 1186, 1857
AjuI GAANNNNNNNTTGG 2 cut(s) 20, 52
AloI GAACNNNNNNTCC 2 cut(s) 1231, 1263
Alw21I GWGCWC 1 cut(s) 1917
Alw26I GTCTC 4 cut(s) 469, 610, 1492, 2148
AlwI GGATC 3 cut(s) 12, 1048, 1414
AlwNI CAGNNNCTG 2 cut(s) 227, 2409
Aor51HI AGCGCT 1 cut(s) 391
AoxI GGCC 5 cut(s) 223, 1039, 1189, 1990, 2429
ApeKI GCWGC 4 cut(s) 802, 1564, 1874, 1877
ApoI RAATTY 8 cut(s) 208, 353, 883, 1364, 1468, 1801, 1962, 2418
ArsI GACNNNNNNTTYG 4 cut(s) 173, 205, 1294, 1326
Asp700I GAANNNNTTC 1 cut(s) 1974
AspLEI GCGC 4 cut(s) 48, 392, 474, 2409
AspS9I GGNCC 2 cut(s) 224, 1704
AsuC2I CCSGG 2 cut(s) 2023, 2483
AsuHPI GGTGA 5 cut(s) 67, 111, 1097, 2315, 2528
AsuII TTCGAA 2 cut(s) 192, 1510
AvaII GGWCC 1 cut(s) 1704
AxyI CCTNAGG 1 cut(s) 777
BaeGI GKGCMC 1 cut(s) 1176
BalI TGGCCA 1 cut(s) 1191
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 2 cut(s) 1779, 2499
BanII GRGCYC 2 cut(s) 432, 1917
BauI CACGAG 1 cut(s) 1428
BbsI GAAGAC 2 cut(s) 23, 1967
Bbv12I GWGCWC 1 cut(s) 1917
BbvI GCAGC 4 cut(s) 789, 1551, 1864, 1886
BccI CCATC 9 cut(s) 994, 1268, 1280, 1421, 2122, 2371, 2432, 2503, 2547
BceAI ACGGC 3 cut(s) 62, 1577, 1767
BcgI CGANNNNNNTGC 2 cut(s) 521, 555
BciT130I CCWGG 3 cut(s) 372, 1188, 1859
BciVI GTATCC 1 cut(s) 2584
BclI TGATCA 1 cut(s) 2215
BcnI CCSGG 2 cut(s) 2023, 2483
BcoDI GTCTC 4 cut(s) 469, 610, 1492, 2148
BfaI CTAG 3 cut(s) 1658, 2252, 2547
BfmI CTRYAG 2 cut(s) 1141, 2086
BfoI RGCGCY 2 cut(s) 393, 2410
BfrI CTTAAG 1 cut(s) 1796
BfuAI ACCTGC 1 cut(s) 1908
BfuI GTATCC 1 cut(s) 2584
BisI GCNGC 4 cut(s) 803, 1565, 1875, 1878
BlsI GCNGC 4 cut(s) 804, 1566, 1876, 1879
BmcAI AGTACT 1 cut(s) 1824
Bme1390I CCNGG 5 cut(s) 372, 1188, 1859, 2023, 2483
Bme18I GGWCC 1 cut(s) 1704
BmgT120I GGNCC 2 cut(s) 224, 1704
BmiI GGNNCC 5 cut(s) 6, 852, 1291, 1781, 2501
BmrFI CCNGG 5 cut(s) 372, 1188, 1859, 2023, 2483
BmrI ACTGGG 1 cut(s) 2204
BmsI GCATC 5 cut(s) 64, 415, 1762, 2081, 2459
BmuI ACTGGG 1 cut(s) 2204
BpiI GAAGAC 2 cut(s) 23, 1967
BplI GAGNNNNNCTC 4 cut(s) 230, 262, 419, 451
BpmI CTGGAG 2 cut(s) 1942, 2264
Bpu10I CCTNAGC 1 cut(s) 1869
Bpu14I TTCGAA 2 cut(s) 192, 1510
BpuEI CTTGAG 3 cut(s) 1202, 2372, 2477
BpuMI CCSGG 2 cut(s) 2023, 2483
Bsa29I ATCGAT 2 cut(s) 1574, 1677
BsaJI CCNNGG 3 cut(s) 234, 1057, 1293
BsaWI WCCGGW 1 cut(s) 1249
BsaXI ACNNNNNCTCC 4 cut(s) 92, 122, 1231, 1261
Bse1I ACTGG 4 cut(s) 2188, 2210, 2247, 2432
Bse21I CCTNAGG 1 cut(s) 777
Bse3DI GCAATG 2 cut(s) 55, 527
BseBI CCWGG 3 cut(s) 372, 1188, 1859
BseCI ATCGAT 2 cut(s) 1574, 1677
BseDI CCNNGG 3 cut(s) 234, 1057, 1293
BseGI GGATG 6 cut(s) 406, 583, 1279, 1291, 1653, 2296
BseMI GCAATG 2 cut(s) 55, 527
BseMII CTCAG 8 cut(s) 144, 219, 234, 688, 760, 1624, 1828, 2416
BseNI ACTGG 4 cut(s) 2188, 2210, 2247, 2432
BseRI GAGGAG 3 cut(s) 863, 1064, 1833
BseSI GKGCMC 1 cut(s) 1176
BseXI GCAGC 4 cut(s) 789, 1551, 1864, 1886
BseYI CCCAGC 1 cut(s) 8
BshFI GGCC 5 cut(s) 225, 1041, 1191, 1992, 2431
BshNI GGYRCC 2 cut(s) 1779, 2499
BshVI ATCGAT 2 cut(s) 1574, 1677
BsiHKAI GWGCWC 1 cut(s) 1917
BsiSI CCGG 4 cut(s) 1250, 1568, 2022, 2483
BslFI GGGAC 1 cut(s) 2566
BsmAI GTCTC 4 cut(s) 469, 610, 1492, 2148
BsmBI CGTCTC 1 cut(s) 1492
BsmFI GGGAC 1 cut(s) 2566
BsnI GGCC 5 cut(s) 225, 1041, 1191, 1992, 2431
Bsp119I TTCGAA 2 cut(s) 192, 1510
Bsp1286I GDGCHC 3 cut(s) 432, 1176, 1917
Bsp1407I TGTACA 1 cut(s) 1621
BspACI CCGC 4 cut(s) 53, 111, 244, 1918
BspANI GGCC 5 cut(s) 225, 1041, 1191, 1992, 2431
BspCNI CTCAG 8 cut(s) 143, 220, 233, 687, 759, 1623, 1827, 2415
BspDI ATCGAT 2 cut(s) 1574, 1677
BspHI TCATGA 1 cut(s) 724
BspLI GGNNCC 5 cut(s) 6, 852, 1291, 1781, 2501
BspMI ACCTGC 1 cut(s) 1908
BspPI GGATC 3 cut(s) 12, 1048, 1414
BspQI GCTCTTC 1 cut(s) 1944
BspT104I TTCGAA 2 cut(s) 192, 1510
BspT107I GGYRCC 2 cut(s) 1779, 2499
BspTI CTTAAG 1 cut(s) 1796
BsrBI CCGCTC 1 cut(s) 246
BsrDI GCAATG 2 cut(s) 55, 527
BsrGI TGTACA 1 cut(s) 1621
BsrI ACTGG 4 cut(s) 2188, 2210, 2247, 2432
BssECI CCNNGG 3 cut(s) 234, 1057, 1293
BssSI CACGAG 1 cut(s) 1428
BssT1I CCWWGG 2 cut(s) 234, 1293
Bst2BI CACGAG 1 cut(s) 1428
Bst2UI CCWGG 3 cut(s) 372, 1188, 1859
Bst4CI ACNGT 9 cut(s) 185, 417, 827, 938, 1603, 1698, 2102, 2283, 2332
Bst6I CTCTTC 6 cut(s) 726, 1000, 1590, 1857, 1944, 2562
BstAFI CTTAAG 1 cut(s) 1796
BstAUI TGTACA 1 cut(s) 1621
BstBI TTCGAA 2 cut(s) 192, 1510
BstC8I GCNNGC 2 cut(s) 1395, 1990
BstDSI CCRYGG 1 cut(s) 1057
BstEII GGTNACC 1 cut(s) 117
BstENI CCTNNNNNAGG 1 cut(s) 1046
BstF5I GGATG 6 cut(s) 406, 583, 1279, 1291, 1653, 2296
BstH2I RGCGCY 2 cut(s) 393, 2410
BstHHI GCGC 4 cut(s) 48, 392, 474, 2409
BstMAI GTCTC 4 cut(s) 469, 610, 1492, 2148
BstMWI GCNNNNNNNGC 2 cut(s) 94, 1874
BstNI CCWGG 3 cut(s) 372, 1188, 1859
BstPI GGTNACC 1 cut(s) 117
BstSCI CCNGG 5 cut(s) 370, 1186, 1857, 2021, 2481
BstSFI CTRYAG 2 cut(s) 1141, 2086
BstSLI GKGCMC 1 cut(s) 1176
BstV1I GCAGC 4 cut(s) 789, 1551, 1864, 1886
BstV2I GAAGAC 2 cut(s) 23, 1967
BstX2I RGATCY 3 cut(s) 4, 1053, 1406
BstXI CCANNNNNNTGG 1 cut(s) 624
BstYI RGATCY 3 cut(s) 4, 1053, 1406
Bsu15I ATCGAT 2 cut(s) 1574, 1677
Bsu36I CCTNAGG 1 cut(s) 777
BsuI GTATCC 1 cut(s) 2584
BsuRI GGCC 5 cut(s) 225, 1041, 1191, 1992, 2431
BsuTUI ATCGAT 2 cut(s) 1574, 1677
BtgI CCRYGG 1 cut(s) 1057
BtgZI GCGATG 2 cut(s) 69, 607
BtsCI GGATG 6 cut(s) 406, 583, 1279, 1291, 1653, 2296
BtsIMutI CAGTG 2 cut(s) 190, 1463
BveI ACCTGC 1 cut(s) 1908
Cac8I GCNNGC 2 cut(s) 1395, 1990
CaiI CAGNNNCTG 2 cut(s) 227, 2409
CciI TCATGA 1 cut(s) 724
CfoI GCGC 4 cut(s) 48, 392, 474, 2409
Cfr13I GGNCC 2 cut(s) 224, 1704
ClaI ATCGAT 2 cut(s) 1574, 1677
Csp6I GTAC 4 cut(s) 791, 1380, 1622, 1823
CviQI GTAC 4 cut(s) 791, 1380, 1622, 1823
EaeI YGGCCR 1 cut(s) 1189
Eam1104I CTCTTC 6 cut(s) 726, 1000, 1590, 1857, 1944, 2562
EarI CTCTTC 6 cut(s) 726, 1000, 1590, 1857, 1944, 2562
Ecl136II GAGCTC 1 cut(s) 1915
Eco130I CCWWGG 2 cut(s) 234, 1293
Eco147I AGGCCT 1 cut(s) 1041
Eco24I GRGCYC 2 cut(s) 432, 1917
Eco32I GATATC 1 cut(s) 1687
Eco47I GGWCC 1 cut(s) 1704
Eco47III AGCGCT 1 cut(s) 391
Eco53kI GAGCTC 1 cut(s) 1915
Eco57I CTGAAG 3 cut(s) 858, 1056, 1724
Eco81I CCTNAGG 1 cut(s) 777
Eco91I GGTNACC 1 cut(s) 117
EcoICRI GAGCTC 1 cut(s) 1915
EcoNI CCTNNNNNAGG 1 cut(s) 1046
EcoO109I RGGNCCY 1 cut(s) 224
EcoO65I GGTNACC 1 cut(s) 117
EcoRII CCWGG 3 cut(s) 370, 1186, 1857
EcoRV GATATC 1 cut(s) 1687
EcoT14I CCWWGG 2 cut(s) 234, 1293
EcoT22I ATGCAT 4 cut(s) 206, 408, 918, 2233
EcoT38I GRGCYC 2 cut(s) 432, 1917
ErhI CCWWGG 2 cut(s) 234, 1293
Esp3I CGTCTC 1 cut(s) 1492
FalI AAGNNNNNCTT 2 cut(s) 1104, 1136
FaqI GGGAC 1 cut(s) 2566
FauNDI CATATG 1 cut(s) 2552
FbaI TGATCA 1 cut(s) 2215
Fnu4HI GCNGC 4 cut(s) 803, 1565, 1875, 1878
FokI GGATG 6 cut(s) 393, 590, 1286, 1298, 1660, 2303
FriOI GRGCYC 2 cut(s) 432, 1917
Fsp4HI GCNGC 4 cut(s) 803, 1565, 1875, 1878
FspBI CTAG 3 cut(s) 1658, 2252, 2547
GlaI GCGC 4 cut(s) 47, 391, 473, 2408
GluI GCNGC 4 cut(s) 803, 1565, 1875, 1878
GsaI CCCAGC 1 cut(s) 12
GsuI CTGGAG 2 cut(s) 1942, 2264
HaeII RGCGCY 2 cut(s) 393, 2410
HaeIII GGCC 5 cut(s) 225, 1041, 1191, 1992, 2431
HapII CCGG 4 cut(s) 1250, 1568, 2022, 2483
HhaI GCGC 4 cut(s) 48, 392, 474, 2409
Hin6I GCGC 4 cut(s) 46, 390, 472, 2407
HinP1I GCGC 4 cut(s) 46, 390, 472, 2407
HincII GTYRAC 1 cut(s) 2260
HindII GTYRAC 1 cut(s) 2260
HindIII AAGCTT 1 cut(s) 1726
HpaII CCGG 4 cut(s) 1250, 1568, 2022, 2483
HphI GGTGA 5 cut(s) 67, 111, 1097, 2315, 2528
Hpy166II GTNNAC 8 cut(s) 647, 760, 941, 1382, 1622, 1624, 2260, 2296
Hpy8I GTNNAC 8 cut(s) 647, 760, 941, 1382, 1622, 1624, 2260, 2296
Hpy99I CGWCG 1 cut(s) 253
HpyAV CCTTC 8 cut(s) 99, 167, 1031, 1137, 1748, 2281, 2322, 2507
HpyCH4III ACNGT 9 cut(s) 185, 417, 827, 938, 1603, 1698, 2102, 2283, 2332
HpyCH4IV ACGT 2 cut(s) 1228, 1848
HpyF10VI GCNNNNNNNGC 2 cut(s) 94, 1874
HpySE526I ACGT 2 cut(s) 1228, 1848
HspAI GCGC 4 cut(s) 46, 390, 472, 2407
Ksp22I TGATCA 1 cut(s) 2215
LguI GCTCTTC 1 cut(s) 1944
LmnI GCTCC 5 cut(s) 850, 1252, 1289, 1912, 1920
Lsp1109I GCAGC 4 cut(s) 789, 1551, 1864, 1886
LweI GCATC 5 cut(s) 64, 415, 1762, 2081, 2459
MaeI CTAG 3 cut(s) 1658, 2252, 2547
MaeII ACGT 2 cut(s) 1228, 1848
MaeIII GTNAC 7 cut(s) 79, 117, 657, 729, 1136, 2127, 2303
MbiI CCGCTC 1 cut(s) 246
MfeI CAATTG 3 cut(s) 423, 570, 1242
MflI RGATCY 3 cut(s) 4, 1053, 1406
MhlI GDGCHC 3 cut(s) 432, 1176, 1917
MlsI TGGCCA 1 cut(s) 1191
MluNI TGGCCA 1 cut(s) 1191
MlyI GAGTC 7 cut(s) 122, 239, 428, 902, 1483, 1602, 2468
MmeI TCCRAC 3 cut(s) 1263, 1890, 2060
Mox20I TGGCCA 1 cut(s) 1191
Mph1103I ATGCAT 4 cut(s) 206, 408, 918, 2233
MroXI GAANNNNTTC 1 cut(s) 1974
MscI TGGCCA 1 cut(s) 1191
MseI TTAA 9 cut(s) 953, 1319, 1359, 1368, 1700, 1730, 1797, 1995, 2322
MslI CAYNNNNRTG 1 cut(s) 921
Msp20I TGGCCA 1 cut(s) 1191
MspA1I CMGCKG 3 cut(s) 12, 1877, 1920
MspCI CTTAAG 1 cut(s) 1796
MspI CCGG 4 cut(s) 1250, 1568, 2022, 2483
MspR9I CCNGG 5 cut(s) 372, 1188, 1859, 2023, 2483
MunI CAATTG 3 cut(s) 423, 570, 1242
MvaI CCWGG 3 cut(s) 372, 1188, 1859
MwoI GCNNNNNNNGC 2 cut(s) 94, 1874
NciI CCSGG 2 cut(s) 2023, 2483
NdeI CATATG 1 cut(s) 2552
NlaIV GGNNCC 5 cut(s) 6, 852, 1291, 1781, 2501
NmuCI GTSAC 3 cut(s) 117, 1136, 2303
NsiI ATGCAT 4 cut(s) 206, 408, 918, 2233
NspV TTCGAA 2 cut(s) 192, 1510
PagI TCATGA 1 cut(s) 724
PceI AGGCCT 1 cut(s) 1041
PciSI GCTCTTC 1 cut(s) 1944
PdmI GAANNNNTTC 1 cut(s) 1974
PfeI GAWTC 7 cut(s) 216, 635, 707, 1157, 1571, 1580, 2336
PflFI GACNNNGTC 1 cut(s) 1747
PflMI CCANNNNNTGG 4 cut(s) 2120, 2194, 2509, 2590
PkrI GCNGC 4 cut(s) 804, 1566, 1876, 1879
PleI GAGTC 7 cut(s) 122, 238, 428, 901, 1482, 1602, 2467
PpsI GAGTC 7 cut(s) 122, 238, 428, 901, 1482, 1602, 2467
PsiI TTATAA 2 cut(s) 359, 1182
Psp124BI GAGCTC 1 cut(s) 1917
Psp6I CCWGG 3 cut(s) 370, 1186, 1857
PspEI GGTNACC 1 cut(s) 117
PspFI CCCAGC 1 cut(s) 8
PspGI CCWGG 3 cut(s) 370, 1186, 1857
PspN4I GGNNCC 5 cut(s) 6, 852, 1291, 1781, 2501
PspPI GGNCC 2 cut(s) 224, 1704
PstNI CAGNNNCTG 2 cut(s) 227, 2409
PsuI RGATCY 3 cut(s) 4, 1053, 1406
PsyI GACNNNGTC 1 cut(s) 1747
PvuII CAGCTG 2 cut(s) 12, 1877
RsaI GTAC 4 cut(s) 792, 1381, 1623, 1824
RsaNI GTAC 4 cut(s) 791, 1380, 1622, 1823
RseI CAYNNNNRTG 1 cut(s) 921
SacI GAGCTC 1 cut(s) 1917
SapI GCTCTTC 1 cut(s) 1944
SaqAI TTAA 9 cut(s) 953, 1319, 1359, 1368, 1700, 1730, 1797, 1995, 2322
SatI GCNGC 4 cut(s) 803, 1565, 1875, 1878
Sau96I GGNCC 2 cut(s) 224, 1704
ScaI AGTACT 1 cut(s) 1824
SchI GAGTC 7 cut(s) 122, 239, 428, 902, 1483, 1602, 2468
ScrFI CCNGG 5 cut(s) 372, 1188, 1859, 2023, 2483
SduI GDGCHC 3 cut(s) 432, 1176, 1917
SfaNI GCATC 5 cut(s) 64, 415, 1762, 2081, 2459
SfcI CTRYAG 2 cut(s) 1141, 2086
SfuI TTCGAA 2 cut(s) 192, 1510
SinI GGWCC 1 cut(s) 1704
SmiMI CAYNNNNRTG 1 cut(s) 921
SmlI CTYRAG 4 cut(s) 1217, 1796, 2387, 2456
SmoI CTYRAG 4 cut(s) 1217, 1796, 2387, 2456
SseBI AGGCCT 1 cut(s) 1041
SsiI CCGC 4 cut(s) 53, 111, 244, 1918
SspI AATATT 1 cut(s) 145
SspMI CTAG 3 cut(s) 1658, 2252, 2547
SstI GAGCTC 1 cut(s) 1917
StuI AGGCCT 1 cut(s) 1041
StyD4I CCNGG 5 cut(s) 370, 1186, 1857, 2021, 2481
StyI CCWWGG 2 cut(s) 234, 1293
TaaI ACNGT 9 cut(s) 185, 417, 827, 938, 1603, 1698, 2102, 2283, 2332
TaiI ACGT 2 cut(s) 1231, 1851
TaqII GACCGA 1 cut(s) 127
TatI WGTACW 2 cut(s) 1621, 1822
TfiI GAWTC 7 cut(s) 216, 635, 707, 1157, 1571, 1580, 2336
Tru1I TTAA 9 cut(s) 953, 1319, 1359, 1368, 1700, 1730, 1797, 1995, 2322
Tru9I TTAA 9 cut(s) 953, 1319, 1359, 1368, 1700, 1730, 1797, 1995, 2322
TscAI CASTG 2 cut(s) 190, 1470
TseFI GTSAC 3 cut(s) 117, 1136, 2303
TseI GCWGC 4 cut(s) 802, 1564, 1874, 1877
Tsp45I GTSAC 3 cut(s) 117, 1136, 2303
TspGWI ACGGA 1 cut(s) 1074
TspRI CASTG 2 cut(s) 190, 1470
Tth111I GACNNNGTC 1 cut(s) 1747
Van91I CCANNNNNTGG 4 cut(s) 2120, 2194, 2509, 2590
Vha464I CTTAAG 1 cut(s) 1796
VpaK11BI GGWCC 1 cut(s) 1704
XagI CCTNNNNNAGG 1 cut(s) 1046
XapI RAATTY 8 cut(s) 208, 353, 883, 1364, 1468, 1801, 1962, 2418
XcmI CCANNNNNNNNNTGG 1 cut(s) 2370
XmnI GAANNNNTTC 1 cut(s) 1974
XspI CTAG 3 cut(s) 1658, 2252, 2547
ZrmI AGTACT 1 cut(s) 1824
Zsp2I ATGCAT 4 cut(s) 206, 408, 918, 2233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.