MD14G1049300.v1.1

ADP binding

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
4691120 .. 4697596
6477 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1049300.v1.1.491

Sequence Viewer

Length: 3114 bp
ATGACTCTAACTTCCTCCTCTTCCAGCAATTCTCGTTCTCAATACCTCTATGACGTTTTCTTGAGTTTCAGAGGTGAAGACACTCGCGAAAATTTTGTCGACCACCTCTATGCTGCTTTGAAGAAAGAAGGCCTATTAGCCTTTCGAGACGACAATGAACTTGAGAGAGGAGAAGATGTGGAGCCGAGGTTGCTGAGAACCATCCGTAAGTCCCGATGCTCGATCGTTGTGTTTTCAGAAGGCTATGCATCTTCCAGATGGTGCCTTGACGAGCTTGTAATGATCCTTGAATGCAAGAGGACCTTCGACCAATTTGTCTTACCAGTCTTCTACGGAGTGGACCCTTCTGATGTGAGGAAGCAGACAGAAAGTATTGCGAAAGCATTTGCCAGGCACGAAAAAGGTCAACCGTTGGACAAGGTGAAGGTATGGAGGGCAGCCCTTACAGAGGCTGCAAATATAGGAGGGACGATGTTGCAAATTGAAGCTGATTGGCACGAACGCAAGTTTATCAAAAATCTTGTTGCAGCGACAACAGAAATACTACAAAGTCTCCTTATCCGACTTTGTCCTGTAGAGCTCAATGGATTTTTTGAAGAACTTCCTAAAGGATTAAAATGGTCGCGTTGGTTTGAATTTCCTTTGAATTCTATACCTGATGGTCTTACTTTGGACCGTCTGGTTGTTCTTGAAGCGAGGTATAGCAGCTGGAGACAAGTCTGGAAGGGGAGAAAGTATCTTCCATCATTGAAGATCCTAGATGTCTGCCATTCCCATAACCTTACTGAAGTCCCCGACTTGTCACTAGTCCCCAACCTAGAGAAACTGATTCTTAACAATTGTAAAAACTTGGTTGGTATCCATGGATCTATTGGAAAGTTAGAGAGACTTGTTTACTTGAACATAAAAGGTTGCAAGCGTATTCGGAAGTTTCCCAAGCACATGCCAGAAAACCTTGAAACAATTATAACACATGGTTGCTCAAATCTTGAGGAGTTTAGAATTATGCAGTCGAAGATGATGATGCATCTGAAAGCTCTTGACGCAGATGAAGCTCATATTAGTGGATTAGTTTATGGGGCACACAAATCAGGGCGCACGTTTTGGGACTGGTTCAATAAAAATACAAAGCTCATAGTTCATGTAAACATTCCTCATTTGTTACGCGGGTGTGAGAAGTTTATGAAGCTAATTATACAGCAATATCATGCTGCTACTAACAATCAGAAATTGAAATGGCTGAACCACAAATATTCAGGGGTGCAAAATCTAAAGCTGATTCCTTCAGTAACAGTAAGTCTGCATAAATTATCCAAGGTTGCGGACTCTTATTCTGCTGGCACCACATACAGAGACCTTATTTCATGCCAGGGTTCTAAGATAGTGGAGGACGTGAATTTGGAAGAAAAGGCTGGGTGTGAAATAGAGGTTGCAGATGTAGAAGATGAGGGTTTAACTGAATCTCTAAAATCCTCATTATTTCTTTATTGTTCCCTTTTTCCATTAGATTATGAATTTAGGAAATATGAGTTGGTTCAGTTATGGATAGCTGAAGGCTTTATTGGAGAGATGCACAGAGAGAGAATGGAGGATACTGGTATTTTGTATTTCGATTTCATGGAGAGTGAAGGCTTTTTTGTGCCCTCAAGAAGTGATTTCAGTGTAGATTTTGATTCAGTGTTCTCACTGCCCATTTATAATCCCAGCAACTTCTTGTACAAGATTAATACTATCAAGCTTTCAGTTTTGGAAAAACAAATTTACCAGGATGGTTATTTCAGAGCTGTGGATGGTAAGTTAGATGGAGCTTCAGAAATGACACAACATTTGTCTCTGATTTTTAAAAATATGGATGAGGTGGGTGGGGTTCTCCAAAAGTTTAAGCGTCTTCGCACGTTGCTTTTGTTCAATGGTAGCAGGTCTTCCATTAAACAAGTTCCTCGTAATCTTTTGTCGGGCTTAAAGTTGTTGAGGACATTGAATTTGAGTGGAACTCTCATCTCTGAACTACCGAGTTCCATTCGAAATGTCAAAGCATTGCGCTATCTTGATGTTTCTCACACTCCCATTAGGCAGTTGCCCGAAGCAATCGATTCTCTTCACAATTTACAGACCATAAAACTGAGAGGTTGTGTTAACTTTGTTCAGTTACCGAAGGGCATCAAGAAGCTAACCAACCTACGCCATGTCGAACTTGATATCATTCGGCAATTGGATTCCTTGCCTGCATACTTGGGAAACTTGACTAACCTGCAGACTCTGTCAGCATTTCTCGTCGGTAGAGATCAGGGGTGCAATATTGGAGAGCTGAAGAATTTGAATCATCTCAAAGGAGCACTTCGCATTTCAAGGCTCGAAAACGTGTTGACTAAGGAAGAGGCTGAGAAAGCTTCATTGAGTACAAAGAAATCCCTCCAGAGAGTGGTTCTCCGGTGGAGTAGTCTGTTGGTTGAGAATGTACGGGAAAAGGAAATCCTTGAATGTCTGCAACCTCATTATGGTCTTCAAGAGCTAGGAATTCAAAACTATAGTGGCTCAACTCTTCCAGCTTGGATTAGCAATCGGGCTTTTGCAGACCTTCTTGTTGTTACTCTCTACAGATGCAAAAATTGTAAACGTCTTCCATCTTTGGGGCAGTTACCAGCGCTTAAGTTTCTCTCCATTATTGAAATGAATGAGGTGGAAGAAATTCATCATCATTTATTCAGAAATGACGGAGTTGCTCAAGAGGACCCTGCATTTCTGAAACTTGAGAGGCTAGAGATTGATATCATGCTTAATTTGAAAGAGTGGATGGCGATAAAACAAGGTGATTTACCGTCTCTACTTAAACTCACGGTGGACTCTTGCCCGGAGCTTGTCACTCTTCCTTCACTTTCAGAACTCAAATCCCTCAAGCATTTGGAGTTCAGACACTGCCCAAAGCTTCTGCCCTTGTCTCAAGATGGACTACCTACCTCACTTGAGTCTTTAGTAATTATATGTTGTCCTCAACTGAAAGAATGGTGCACGAAGAGGGGAGGTCAAGATCAGGACAACCTATCGCATGTGCCTAGAGTATGGTTGGATCATGAAGAGGTAGCTAAAAATGCAAGGAGAACAATCTTTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

1038

Amino Acids

118.71

Weight (kDa)

8.42

Isoelectric Point (pI)

44.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 17 - 179 1.6e-48 TIR domain
TIR_2 PF13676 19 - 115 7.4e-15 TIR domain
WHD_DRP PF23559 499 - 547 3.6e-12 Disease resistance protein Winged helix domain
LRR_14 PF23598 674 - 970 2.9e-27 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 767 - 891 2.4e-37 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000546)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700
malus_domestica MD14G1049300.v1.1
rosa_chinensis RchiOBHm_Chr4g0433201 RchiOBHm_Chr6g0255111 RchiOBHm_Chr7g0235301 RchiOBHm_Chr7g0235351 RchiOBHm_Chr7g0235361 RchiOBHm_Chr7g0235381
rosa_laevigata RLG00000001164 RLG00000013941
rosa_multiflora Rmu_co8331033.1_g000001 Rmu_co8369635.1_g000001 Rmu_sc0000957.1_g000010 Rmu_sc0003304.1_g000033 Rmu_sc0003304.1_g000041 Rmu_sc0003488.1_g000001 Rmu_sc0004529.1_g000036 Rmu_sc0004637.1_g000013 Rmu_sc0004657.1_g000070 Rmu_sc0004657.1_g000076 Rmu_sc0006578.1_g000004 Rmu_sc0011027.1_g000008 Rmu_sc0011027.1_g000010 Rmu_sc0013813.1_g000001 Rmu_sc0014112.1_g000001 Rmu_sc0014112.1_g000002 Rmu_sc0014112.1_g000004 Rmu_ssc0000011.1_g000040 Rmu_ssc0000295.1_g000011
rosa_roxburghii Rroxscaffold_2G00103040 Rroxscaffold_3G00226100 Rroxscaffold_3G00226120 Rroxscaffold_5G00374710 Rroxscaffold_5G00374720 Rroxscaffold_7G00200160 Rroxscaffold_7G00200190
rosa_rugosa Rorug05G0474400 Rorug05G0474400 Rorug06G0037400 Rorug06G0037500 Rorug06G0037600 Rorug06G0038300 Rorug06G0038300 Rorug06G0038400 Rorug06G0038500 Rorug07G0289800 Rorug07G0289900 Rorug07G0290000 Rorug07G0290000
rosa_samantha Rh4AG320500 Rh4AG320700 Rh4AG321100 Rh4DG324200 Rh4DG324700 Rh6BG067500 Rh6CG066600 Rh6CG066700 Rh6DG063600 Rh6DG063700 Rh6DG147600 Rh7AG444800 Rh7AG445000 Rh7BG416700 Rh7BG416800 Rh7CG465200 Rh7CG465300 Rh7CG465700 Rh7DG433600 Rh7DG433800
rosa_wichuraiana Rw0G008730 Rw0G008770 Rw4G027830 Rw7G036940 Rw7G036980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 968, 1698
AasI GACNNNNNNGTC 1 cut(s) 314
Acc36I ACCTGC 2 cut(s) 1908, 2259
AccB1I GGYRCC 2 cut(s) 261, 1340
AccB7I CCANNNNNTGG 1 cut(s) 2422
AccI GTMKAC 1 cut(s) 99
AccII CGCG 3 cut(s) 87, 625, 1167
AciI CCGC 2 cut(s) 1167, 1322
AclWI GGATC 4 cut(s) 277, 748, 874, 3075
AcuI CTGAAG 5 cut(s) 807, 1269, 1572, 1794, 2330
AfaI GTAC 3 cut(s) 1718, 2401, 2460
AfeI AGCGCT 1 cut(s) 2646
AfiI CCNNNNNNNGG 4 cut(s) 448, 2422, 2498, 2630
AflII CTTAAG 1 cut(s) 2648
AflIII ACRYGT 1 cut(s) 2361
AhlI ACTAGT 1 cut(s) 805
AjiI CACGTC 1 cut(s) 1393
AjnI CCWGG 3 cut(s) 389, 1368, 1764
AjuI GAANNNNNNNTTGG 4 cut(s) 1514, 1545, 1546, 1577
Alw21I GWGCWC 3 cut(s) 582, 2338, 3011
Alw26I GTCTC 8 cut(s) 141, 557, 706, 880, 1347, 1836, 2826, 2943
Alw44I GTGCAC 1 cut(s) 3007
AlwI GGATC 4 cut(s) 277, 748, 874, 3075
AlwNI CAGNNNCTG 3 cut(s) 452, 2260, 2916
Aor51HI AGCGCT 1 cut(s) 2646
AoxI GGCC 1 cut(s) 130
ApaLI GTGCAC 1 cut(s) 3007
ApeKI GCWGC 6 cut(s) 113, 437, 452, 527, 705, 1211
ArsI GACNNNNNNTTYG 6 cut(s) 81, 113, 1810, 1842, 1966, 1998
AseI ATTAAT 1 cut(s) 1725
Asp700I GAANNNNTTC 2 cut(s) 600, 2688
AspLEI GCGC 3 cut(s) 1098, 2043, 2647
AspS9I GGNCC 4 cut(s) 300, 340, 673, 2731
AsuC2I CCSGG 1 cut(s) 2852
AsuHPI GGTGA 3 cut(s) 86, 433, 2822
AsuII TTCGAA 1 cut(s) 2023
AvaII GGWCC 4 cut(s) 300, 340, 673, 2731
BaeGI GKGCMC 3 cut(s) 1084, 1644, 3011
BanI GGYRCC 2 cut(s) 261, 1340
BanII GRGCYC 1 cut(s) 582
BarI GAAGNNNNNNTAC 2 cut(s) 1906, 1938
BbsI GAAGAC 6 cut(s) 84, 319, 1880, 1914, 2495, 2612
Bbv12I GWGCWC 3 cut(s) 582, 2338, 3011
BbvI GCAGC 6 cut(s) 100, 439, 449, 539, 717, 1198
BciT130I CCWGG 3 cut(s) 391, 1370, 1766
BciVI GTATCC 2 cut(s) 869, 1585
BcnI CCSGG 1 cut(s) 2852
BcoDI GTCTC 8 cut(s) 141, 557, 706, 880, 1347, 1836, 2826, 2943
BcuI ACTAGT 1 cut(s) 805
BfaI CTAG 6 cut(s) 758, 806, 818, 2513, 2759, 3054
BfmI CTRYAG 4 cut(s) 573, 2252, 2527, 2596
BfoI RGCGCY 1 cut(s) 2648
BfrI CTTAAG 1 cut(s) 2648
BfuAI ACCTGC 2 cut(s) 1908, 2259
BfuI GTATCC 2 cut(s) 869, 1585
BisI GCNGC 6 cut(s) 114, 438, 453, 528, 706, 1212
BlsI GCNGC 6 cut(s) 115, 439, 454, 529, 707, 1213
Bme1390I CCNGG 4 cut(s) 391, 1370, 1766, 2852
Bme18I GGWCC 4 cut(s) 300, 340, 673, 2731
BmgBI CACGTC 1 cut(s) 1393
BmgT120I GGNCC 4 cut(s) 300, 340, 673, 2731
BmiI GGNNCC 5 cut(s) 183, 263, 342, 1342, 2733
BmrFI CCNGG 4 cut(s) 391, 1370, 1766, 2852
BmsI GCATC 7 cut(s) 206, 257, 1014, 1036, 1560, 2169, 2591
BpiI GAAGAC 6 cut(s) 84, 319, 1880, 1914, 2495, 2612
BplI GAGNNNNNCTC 4 cut(s) 1978, 2010, 2412, 2444
BpmI CTGGAG 2 cut(s) 730, 2399
Bpu14I TTCGAA 1 cut(s) 2023
BpuEI CTTGAG 9 cut(s) 82, 182, 1010, 1630, 2709, 2771, 2879, 2925, 2984
BpuMI CCSGG 1 cut(s) 2852
Bsa29I ATCGAT 1 cut(s) 2091
BsaBI GATNNNNATC 1 cut(s) 2768
BsaI GGTCTC 1 cut(s) 1347
BsaJI CCNNGG 4 cut(s) 185, 862, 1314, 1369
BsaWI WCCGGW 1 cut(s) 2430
BsaXI ACNNNNNCTCC 6 cut(s) 162, 173, 192, 203, 537, 567
Bsc4I CCNNNNNNNGG 4 cut(s) 448, 2422, 2498, 2630
Bse1I ACTGG 3 cut(s) 323, 1115, 1600
Bse3DI GCAATG 1 cut(s) 2036
Bse8I GATNNNNATC 1 cut(s) 2768
BseBI CCWGG 3 cut(s) 391, 1370, 1766
BseCI ATCGAT 1 cut(s) 2091
BseDI CCNNGG 4 cut(s) 185, 862, 1314, 1369
BseGI GGATG 5 cut(s) 201, 1774, 1795, 1858, 2799
BseJI GATNNNNATC 1 cut(s) 2768
BseLI CCNNNNNNNGG 4 cut(s) 448, 2422, 2498, 2630
BseMI GCAATG 1 cut(s) 2036
BseMII CTCAG 3 cut(s) 185, 2114, 2373
BseNI ACTGG 3 cut(s) 323, 1115, 1600
BseRI GAGGAG 3 cut(s) 7, 183, 1007
BseSI GKGCMC 3 cut(s) 1084, 1644, 3011
BseXI GCAGC 6 cut(s) 100, 439, 449, 539, 717, 1198
BseYI CCCAGC 2 cut(s) 1412, 1703
Bsh1236I CGCG 3 cut(s) 87, 625, 1167
Bsh1285I CGRYCG 1 cut(s) 225
BshFI GGCC 1 cut(s) 132
BshNI GGYRCC 2 cut(s) 261, 1340
BshVI ATCGAT 1 cut(s) 2091
BsiEI CGRYCG 1 cut(s) 225
BsiHKAI GWGCWC 3 cut(s) 582, 2338, 3011
BsiSI CCGG 2 cut(s) 2431, 2852
BslFI GGGAC 5 cut(s) 196, 481, 776, 794, 1121
BslI CCNNNNNNNGG 4 cut(s) 448, 2422, 2498, 2630
BsmAI GTCTC 8 cut(s) 141, 557, 706, 880, 1347, 1836, 2826, 2943
BsmBI CGTCTC 2 cut(s) 141, 2826
BsmFI GGGAC 5 cut(s) 196, 481, 776, 794, 1121
BsmI GAATGC 1 cut(s) 296
BsnI GGCC 1 cut(s) 132
Bso31I GGTCTC 1 cut(s) 1347
Bsp119I TTCGAA 1 cut(s) 2023
Bsp1286I GDGCHC 5 cut(s) 582, 1084, 1644, 2338, 3011
Bsp1407I TGTACA 1 cut(s) 1716
Bsp143I GATC 7 cut(s) 222, 282, 753, 866, 2284, 3028, 3067
Bsp19I CCATGG 1 cut(s) 862
Bsp68I TCGCGA 1 cut(s) 87
BspACI CCGC 2 cut(s) 1167, 1322
BspANI GGCC 1 cut(s) 132
BspCNI CTCAG 3 cut(s) 186, 2115, 2374
BspDI ATCGAT 1 cut(s) 2091
BspFNI CGCG 3 cut(s) 87, 625, 1167
BspHI TCATGA 1 cut(s) 3070
BspLI GGNNCC 5 cut(s) 183, 263, 342, 1342, 2733
BspMAI CTGCAG 1 cut(s) 2256
BspMI ACCTGC 2 cut(s) 1908, 2259
BspPI GGATC 4 cut(s) 277, 748, 874, 3075
BspT104I TTCGAA 1 cut(s) 2023
BspT107I GGYRCC 2 cut(s) 261, 1340
BspTI CTTAAG 1 cut(s) 2648
BspTNI GGTCTC 1 cut(s) 1347
BsrDI GCAATG 1 cut(s) 2036
BsrGI TGTACA 1 cut(s) 1716
BsrI ACTGG 3 cut(s) 323, 1115, 1600
BssECI CCNNGG 4 cut(s) 185, 862, 1314, 1369
BssMI GATC 7 cut(s) 222, 282, 753, 866, 2284, 3028, 3067
BssT1I CCWWGG 2 cut(s) 862, 1314
Bst2UI CCWGG 3 cut(s) 391, 1370, 1766
Bst4CI ACNGT 5 cut(s) 411, 677, 1294, 2820, 2839
Bst6I CTCTTC 7 cut(s) 25, 2103, 2370, 2547, 2871, 3008, 3069
BstAFI CTTAAG 1 cut(s) 2648
BstAUI TGTACA 1 cut(s) 1716
BstBI TTCGAA 1 cut(s) 2023
BstC8I GCNNGC 3 cut(s) 917, 1339, 2226
BstDEI CTNAG 5 cut(s) 194, 1377, 2123, 2370, 2382
BstDSI CCRYGG 1 cut(s) 862
BstENI CCTNNNNNAGG 1 cut(s) 446
BstF5I GGATG 5 cut(s) 201, 1774, 1795, 1858, 2799
BstFNI CGCG 3 cut(s) 87, 625, 1167
BstH2I RGCGCY 1 cut(s) 2648
BstHHI GCGC 3 cut(s) 1098, 2043, 2647
BstKTI GATC 7 cut(s) 225, 285, 756, 869, 2287, 3031, 3070
BstMAI GTCTC 8 cut(s) 141, 557, 706, 880, 1347, 1836, 2826, 2943
BstMBI GATC 7 cut(s) 222, 282, 753, 866, 2284, 3028, 3067
BstMCI CGRYCG 1 cut(s) 225
BstMWI GCNNNNNNNGC 5 cut(s) 190, 1043, 1052, 2387, 3089
BstNI CCWGG 3 cut(s) 391, 1370, 1766
BstNSI RCATGY 2 cut(s) 946, 3050
BstSCI CCNGG 4 cut(s) 389, 1368, 1764, 2850
BstSFI CTRYAG 4 cut(s) 573, 2252, 2527, 2596
BstSLI GKGCMC 3 cut(s) 1084, 1644, 3011
BstUI CGCG 3 cut(s) 87, 625, 1167
BstV1I GCAGC 6 cut(s) 100, 439, 449, 539, 717, 1198
BstV2I GAAGAC 6 cut(s) 84, 319, 1880, 1914, 2495, 2612
BstX2I RGATCY 2 cut(s) 753, 866
BstYI RGATCY 2 cut(s) 753, 866
Bsu15I ATCGAT 1 cut(s) 2091
BsuI GTATCC 2 cut(s) 869, 1585
BsuRI GGCC 1 cut(s) 132
BsuTUI ATCGAT 1 cut(s) 2091
BtgI CCRYGG 1 cut(s) 862
BtrI CACGTC 1 cut(s) 1393
BtsCI GGATG 5 cut(s) 201, 1774, 1795, 1858, 2799
BtsI GCAGTG 2 cut(s) 1685, 2914
BtsIMutI CAGTG 4 cut(s) 1666, 1683, 1685, 2914
BtuMI TCGCGA 1 cut(s) 87
BveI ACCTGC 2 cut(s) 1908, 2259
Cac8I GCNNGC 3 cut(s) 917, 1339, 2226
CaiI CAGNNNCTG 3 cut(s) 452, 2260, 2916
CciI TCATGA 1 cut(s) 3070
CfoI GCGC 3 cut(s) 1098, 2043, 2647
Cfr13I GGNCC 4 cut(s) 300, 340, 673, 2731
ClaI ATCGAT 1 cut(s) 2091
CseI GACGC 2 cut(s) 1052, 1874
Csp6I GTAC 3 cut(s) 1717, 2400, 2459
CviQI GTAC 3 cut(s) 1717, 2400, 2459
DdeI CTNAG 5 cut(s) 194, 1377, 2123, 2370, 2382
DpnI GATC 7 cut(s) 224, 284, 755, 868, 2286, 3030, 3069
DpnII GATC 7 cut(s) 222, 282, 753, 866, 2284, 3028, 3067
DraI TTTAAA 1 cut(s) 1843
DrdI GACNNNNNNGTC 1 cut(s) 314
DseDI GACNNNNNNGTC 1 cut(s) 314
Eam1104I CTCTTC 7 cut(s) 25, 2103, 2370, 2547, 2871, 3008, 3069
EarI CTCTTC 7 cut(s) 25, 2103, 2370, 2547, 2871, 3008, 3069
Ecl136II GAGCTC 1 cut(s) 580
Eco130I CCWWGG 2 cut(s) 862, 1314
Eco147I AGGCCT 1 cut(s) 132
Eco24I GRGCYC 1 cut(s) 582
Eco31I GGTCTC 1 cut(s) 1347
Eco32I GATATC 2 cut(s) 2200, 2770
Eco47I GGWCC 4 cut(s) 300, 340, 673, 2731
Eco47III AGCGCT 1 cut(s) 2646
Eco53kI GAGCTC 1 cut(s) 580
Eco57I CTGAAG 5 cut(s) 807, 1269, 1572, 1794, 2330
EcoICRI GAGCTC 1 cut(s) 580
EcoNI CCTNNNNNAGG 1 cut(s) 446
EcoO109I RGGNCCY 2 cut(s) 300, 2731
EcoRI GAATTC 2 cut(s) 646, 2517
EcoRII CCWGG 3 cut(s) 389, 1368, 1764
EcoRV GATATC 2 cut(s) 2200, 2770
EcoT14I CCWWGG 2 cut(s) 862, 1314
EcoT22I ATGCAT 2 cut(s) 250, 1029
EcoT38I GRGCYC 1 cut(s) 582
ErhI CCWWGG 2 cut(s) 862, 1314
Esp3I CGTCTC 2 cut(s) 141, 2826
FalI AAGNNNNNCTT 4 cut(s) 287, 319, 2322, 2354
FaqI GGGAC 5 cut(s) 196, 481, 776, 794, 1121
FauI CCCGC 1 cut(s) 1160
FblI GTMKAC 1 cut(s) 99
Fnu4HI GCNGC 6 cut(s) 114, 438, 453, 528, 706, 1212
FokI GGATG 5 cut(s) 188, 1781, 1802, 1865, 2806
FriOI GRGCYC 1 cut(s) 582
Fsp4HI GCNGC 6 cut(s) 114, 438, 453, 528, 706, 1212
FspBI CTAG 6 cut(s) 758, 806, 818, 2513, 2759, 3054
GlaI GCGC 3 cut(s) 1097, 2042, 2646
GluI GCNGC 6 cut(s) 114, 438, 453, 528, 706, 1212
GsaI CCCAGC 2 cut(s) 1416, 1707
GsuI CTGGAG 2 cut(s) 730, 2399
HaeII RGCGCY 1 cut(s) 2648
HaeIII GGCC 1 cut(s) 132
HapII CCGG 2 cut(s) 2431, 2852
HgaI GACGC 2 cut(s) 1052, 1874
HhaI GCGC 3 cut(s) 1098, 2043, 2647
Hin6I GCGC 3 cut(s) 1096, 2041, 2645
HinP1I GCGC 3 cut(s) 1096, 2041, 2645
HincII GTYRAC 4 cut(s) 100, 407, 2137, 2367
HindII GTYRAC 4 cut(s) 100, 407, 2137, 2367
HindIII AAGCTT 3 cut(s) 1736, 2388, 2924
HpaI GTTAAC 1 cut(s) 2137
HpaII CCGG 2 cut(s) 2431, 2852
HphI GGTGA 3 cut(s) 86, 433, 2822
Hpy99I CGWCG 1 cut(s) 2279
HpyCH4III ACNGT 5 cut(s) 411, 677, 1294, 2820, 2839
HpyCH4IV ACGT 6 cut(s) 54, 1100, 1392, 1895, 2361, 2617
HpyF10VI GCNNNNNNNGC 5 cut(s) 190, 1043, 1052, 2387, 3089
HpyF3I CTNAG 5 cut(s) 194, 1377, 2123, 2370, 2382
HpySE526I ACGT 6 cut(s) 54, 1100, 1392, 1895, 2361, 2617
HspAI GCGC 3 cut(s) 1096, 2041, 2645
KspAI GTTAAC 1 cut(s) 2137
Kzo9I GATC 7 cut(s) 222, 282, 753, 866, 2284, 3028, 3067
LmnI GCTCC 4 cut(s) 181, 1805, 2333, 2854
Lsp1109I GCAGC 6 cut(s) 100, 439, 449, 539, 717, 1198
LweI GCATC 7 cut(s) 206, 257, 1014, 1036, 1560, 2169, 2591
MaeI CTAG 6 cut(s) 758, 806, 818, 2513, 2759, 3054
MaeII ACGT 6 cut(s) 54, 1100, 1392, 1895, 2361, 2617
MaeIII GTNAC 7 cut(s) 801, 1161, 1288, 2148, 2587, 2637, 2860
MalI GATC 7 cut(s) 224, 284, 755, 868, 2286, 3030, 3069
MboI GATC 7 cut(s) 222, 282, 753, 866, 2284, 3028, 3067
MfeI CAATTG 2 cut(s) 838, 2210
MflI RGATCY 2 cut(s) 753, 866
MhlI GDGCHC 5 cut(s) 582, 1084, 1644, 2338, 3011
MlyI GAGTC 4 cut(s) 1319, 2251, 2837, 2975
MmeI TCCRAC 3 cut(s) 393, 586, 3045
Mph1103I ATGCAT 2 cut(s) 250, 1029
MroXI GAANNNNTTC 2 cut(s) 600, 2688
MslI CAYNNNNRTG 2 cut(s) 108, 1062
MspA1I CMGCKG 1 cut(s) 708
MspCI CTTAAG 1 cut(s) 2648
MspI CCGG 2 cut(s) 2431, 2852
MspR9I CCNGG 4 cut(s) 391, 1370, 1766, 2852
MunI CAATTG 2 cut(s) 838, 2210
Mva1269I GAATGC 1 cut(s) 296
MvaI CCWGG 3 cut(s) 391, 1370, 1766
MvnI CGCG 3 cut(s) 87, 625, 1167
MwoI GCNNNNNNNGC 5 cut(s) 190, 1043, 1052, 2387, 3089
NciI CCSGG 1 cut(s) 2852
NcoI CCATGG 1 cut(s) 862
NdeII GATC 7 cut(s) 222, 282, 753, 866, 2284, 3028, 3067
NlaIV GGNNCC 5 cut(s) 183, 263, 342, 1342, 2733
NmeAIII GCCGAG 1 cut(s) 210
NmuCI GTSAC 2 cut(s) 801, 2860
NruI TCGCGA 1 cut(s) 87
NsiI ATGCAT 2 cut(s) 250, 1029
NspI RCATGY 2 cut(s) 946, 3050
NspV TTCGAA 1 cut(s) 2023
PagI TCATGA 1 cut(s) 3070
PceI AGGCCT 1 cut(s) 132
PctI GAATGC 1 cut(s) 296
PdmI GAANNNNTTC 2 cut(s) 600, 2688
PfeI GAWTC 7 cut(s) 829, 1279, 1460, 1673, 2093, 2216, 2320
PflFI GACNNNGTC 2 cut(s) 567, 2260
PflMI CCANNNNNTGG 1 cut(s) 2422
PkrI GCNGC 6 cut(s) 115, 439, 454, 529, 707, 1213
Ple19I CGATCG 1 cut(s) 225
PleI GAGTC 4 cut(s) 1319, 2251, 2837, 2974
PpsI GAGTC 4 cut(s) 1319, 2251, 2837, 2974
PpuMI RGGWCCY 2 cut(s) 300, 2731
PshBI ATTAAT 1 cut(s) 1725
PsiI TTATAA 2 cut(s) 968, 1698
Psp124BI GAGCTC 1 cut(s) 582
Psp5II RGGWCCY 2 cut(s) 300, 2731
Psp6I CCWGG 3 cut(s) 389, 1368, 1764
PspFI CCCAGC 2 cut(s) 1412, 1703
PspGI CCWGG 3 cut(s) 389, 1368, 1764
PspN4I GGNNCC 5 cut(s) 183, 263, 342, 1342, 2733
PspPI GGNCC 4 cut(s) 300, 340, 673, 2731
PspPPI RGGWCCY 2 cut(s) 300, 2731
PstI CTGCAG 1 cut(s) 2256
PstNI CAGNNNCTG 3 cut(s) 452, 2260, 2916
PsuI RGATCY 2 cut(s) 753, 866
PsyI GACNNNGTC 2 cut(s) 567, 2260
PvuI CGATCG 1 cut(s) 225
PvuII CAGCTG 1 cut(s) 708
RruI TCGCGA 1 cut(s) 87
RsaI GTAC 3 cut(s) 1718, 2401, 2460
RsaNI GTAC 3 cut(s) 1717, 2400, 2459
RseI CAYNNNNRTG 2 cut(s) 108, 1062
SacI GAGCTC 1 cut(s) 582
SalI GTCGAC 1 cut(s) 98
SatI GCNGC 6 cut(s) 114, 438, 453, 528, 706, 1212
Sau3AI GATC 7 cut(s) 222, 282, 753, 866, 2284, 3028, 3067
Sau96I GGNCC 4 cut(s) 300, 340, 673, 2731
SchI GAGTC 4 cut(s) 1319, 2251, 2837, 2975
ScrFI CCNGG 4 cut(s) 391, 1370, 1766, 2852
SduI GDGCHC 5 cut(s) 582, 1084, 1644, 2338, 3011
SfaNI GCATC 7 cut(s) 206, 257, 1014, 1036, 1560, 2169, 2591
SfcI CTRYAG 4 cut(s) 573, 2252, 2527, 2596
SfuI TTCGAA 1 cut(s) 2023
SinI GGWCC 4 cut(s) 300, 340, 673, 2731
SmiMI CAYNNNNRTG 2 cut(s) 108, 1062
SpeI ACTAGT 1 cut(s) 805
SseBI AGGCCT 1 cut(s) 132
SsiI CCGC 2 cut(s) 1167, 1322
SspI AATATT 2 cut(s) 1253, 2299
SspMI CTAG 6 cut(s) 758, 806, 818, 2513, 2759, 3054
SstI GAGCTC 1 cut(s) 582
StuI AGGCCT 1 cut(s) 132
StyD4I CCNGG 4 cut(s) 389, 1368, 1764, 2850
StyI CCWWGG 2 cut(s) 862, 1314
TaaI ACNGT 5 cut(s) 411, 677, 1294, 2820, 2839
TaiI ACGT 6 cut(s) 57, 1103, 1395, 1898, 2364, 2620
TatI WGTACW 2 cut(s) 1716, 2399
TfiI GAWTC 7 cut(s) 829, 1279, 1460, 1673, 2093, 2216, 2320
TscAI CASTG 4 cut(s) 1666, 1683, 1692, 2921
TseFI GTSAC 2 cut(s) 801, 2860
TseI GCWGC 6 cut(s) 113, 437, 452, 527, 705, 1211
Tsp45I GTSAC 2 cut(s) 801, 2860
TspGWI ACGGA 3 cut(s) 194, 348, 2730
TspRI CASTG 4 cut(s) 1666, 1683, 1692, 2921
Tth111I GACNNNGTC 2 cut(s) 567, 2260
Van91I CCANNNNNTGG 1 cut(s) 2422
Vha464I CTTAAG 1 cut(s) 2648
VneI GTGCAC 1 cut(s) 3007
VpaK11BI GGWCC 4 cut(s) 300, 340, 673, 2731
VspI ATTAAT 1 cut(s) 1725
XagI CCTNNNNNAGG 1 cut(s) 446
XceI RCATGY 2 cut(s) 946, 3050
XcmI CCANNNNNNNNNTGG 1 cut(s) 869
XmiI GTMKAC 1 cut(s) 99
XmnI GAANNNNTTC 2 cut(s) 600, 2688
XspI CTAG 6 cut(s) 758, 806, 818, 2513, 2759, 3054
Zsp2I ATGCAT 2 cut(s) 250, 1029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.