Rh4DG324700

phosphatase 2c

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
54937945 .. 54943168
5224 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG324700.1

Sequence Viewer

Length: 1752 bp
ATGGTTGTAGATTCTTTCTCTGCTGGCACCAGGGATAGAGTACAGGATGCAAATTTGGAGAAAAATCCTACGCAGGTTGCAGATGAGCATGGGATTTTGCCTCACCATTTGAAAAGGTTATTTCTGTATTGTTCACTCTTTCCCTTCGGTTATGAATTTAGAAAAGATGAGTTGGTTCAATTATGGATAGCTGAAGGCTTTATCAGAGAGAGGCAAGGGGAGAGAATGGAAGATACTGCTGGCGAGCATTTCTATTCCTTGGAGAAGGAAGGCTTCTTTGTGTTTTCAAGATGTGATTTCACTATGGATTTTGATTCAGTGCCCTCAGCTCCCGCGGATAATCCCAGCAACTTCTTGTACAAAGTAAATCCTAGCAAGCATTCATTATTGGACCACACGATTTTTTCAGGTATTTATTTCAAAGCCTTGGATGGTAAGTTAGATGAAGCCTCTAAAATGACTAGACATTTGTCTTTGATTAATGAGGATATTGATGGGATGGCTTTTGGAATTTTTCAAGACTTTAAGCATTTGCGCACACTGCATATGCTCTCTTGTCGTGGGTCTTTTATGAAACACGTCCCTCGTGATTTGTGTTTCACATTAACGTTCTTGAGAACCTTGAATTTGAGTGGGACATTGATTTCTGAATTGCCAACTGCCATTGGAAATGTGAAATCATTGCGATATGTTGATGCCTCACATACTCGAATTGCACGATTGCCTGAATCAATAGATTCTCTTTGCAATTTACAAACCATAAAGCTCAGAGATTGCACACACTTTGTTGAGTTGCCAAAGGGCATGAAGAAGTTAACAAATCTCCGACATATTGATCTTGATATCATTCGGCAATTGGATTCCATGCCTGCACACTTGGGGAACTTGAGGAACCTTCAAACATTGTCAGCATTTCTTGTTGGTAGAGATGATGGGTGTCATGTTGGAGAGTTGAAGAATTTGAATGATCTCAAAGGAGCGCTTAACATTTCAAGGCTTGAAAATGTGCTGAGTAAGAAGGAGGCTGAGGAAGCTGCTTTGATTGATAAGAAATGTCTCCATACGTTGGAGCTTCGATGGAGTAATATGTTTGCTGAGTATGCCGAGCAAGAAGAGAAAATACTAGAATGTCTTCAACCACATCCTGGCCTTAAAGTGTTACAAATACAACAGTACAGTGGCTCAGTACTTCCAACTTGGATTTGCAATCCCGCTTTTGCTGACCTTGTTGCCATTACCCTCTATAGATGCAGGAATTGTGAACTTCTCCCATGTATGGGACAATTGCCAGCACTCAAGTCTCTTTCTATTATAGAGATGAATAAGGTGAAACAAATTGATCATCAATTCCTTAGAAATGGCCCGGGTGAATATGCGTTTCCAAAACTTGAGAGACTAGAAGTTGATATCATGCTCAGTTTAGAAGAGTGGGAGCACGTACAAGTAGGTGATTTACCTTCCCTGGTTAAACTTACTGTGGACTCCTGCCCAGAACTTGTCACTCTTCCTCCACTTTCATGCCTCCAGTCCTTAAAGCACTTGGAGTTCAAGCGATGCCCAAAGATTCTCTCCTTGCCTGGTGATGGACTACCACCTTCACTTGAGTCTTTCTTAATAGTGGATTGCCTTGAACTGAAAGAATGGTGCCTGAAGAGTGAGCATTGGAGCATGTTATGTCATATGCCCAGCATATGGTTTGATGACATTGATCACAAAGAGGTAAAGGTGAATAAAAATAGTTTGTCATTTTAA

Protein Analysis

583

Amino Acids

66.57

Weight (kDa)

5.92

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 46 - 94 4.9e-14 Disease resistance protein Winged helix domain
LRR_14 PF23598 155 - 280 6.5e-17 Leucine-rich repeat region
LRR_14 PF23598 222 - 494 7.6e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 316 - 440 3.4e-38 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000546)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700
malus_domestica MD14G1049300.v1.1
rosa_chinensis RchiOBHm_Chr4g0433201 RchiOBHm_Chr6g0255111 RchiOBHm_Chr7g0235301 RchiOBHm_Chr7g0235351 RchiOBHm_Chr7g0235361 RchiOBHm_Chr7g0235381
rosa_laevigata RLG00000001164 RLG00000013941
rosa_multiflora Rmu_co8331033.1_g000001 Rmu_co8369635.1_g000001 Rmu_sc0000957.1_g000010 Rmu_sc0003304.1_g000033 Rmu_sc0003304.1_g000041 Rmu_sc0003488.1_g000001 Rmu_sc0004529.1_g000036 Rmu_sc0004637.1_g000013 Rmu_sc0004657.1_g000070 Rmu_sc0004657.1_g000076 Rmu_sc0006578.1_g000004 Rmu_sc0011027.1_g000008 Rmu_sc0011027.1_g000010 Rmu_sc0013813.1_g000001 Rmu_sc0014112.1_g000001 Rmu_sc0014112.1_g000002 Rmu_sc0014112.1_g000004 Rmu_ssc0000011.1_g000040 Rmu_ssc0000295.1_g000011
rosa_roxburghii Rroxscaffold_2G00103040 Rroxscaffold_3G00226100 Rroxscaffold_3G00226120 Rroxscaffold_5G00374710 Rroxscaffold_5G00374720 Rroxscaffold_7G00200160 Rroxscaffold_7G00200190
rosa_rugosa Rorug05G0474400 Rorug05G0474400 Rorug06G0037400 Rorug06G0037500 Rorug06G0037600 Rorug06G0038300 Rorug06G0038300 Rorug06G0038400 Rorug06G0038500 Rorug07G0289800 Rorug07G0289900 Rorug07G0290000 Rorug07G0290000
rosa_samantha Rh4AG320500 Rh4AG320700 Rh4AG321100 Rh4DG324200 Rh4DG324700 Rh6BG067500 Rh6CG066600 Rh6CG066700 Rh6DG063600 Rh6DG063700 Rh6DG147600 Rh7AG444800 Rh7AG445000 Rh7BG416700 Rh7BG416800 Rh7CG465200 Rh7CG465300 Rh7CG465700 Rh7DG433600 Rh7DG433800
rosa_wichuraiana Rw0G008730 Rw0G008770 Rw4G027830 Rw7G036940 Rw7G036980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 536
Acc36I ACCTGC 1 cut(s) 64
AccB1I GGYRCC 2 cut(s) 26, 1644
AccB7I CCANNNNNTGG 3 cut(s) 1066, 1145, 1692
AccII CGCG 1 cut(s) 335
AciI CCGC 3 cut(s) 333, 335, 1212
AclI AACGTT 1 cut(s) 608
AcsI RAATTY 5 cut(s) 52, 155, 510, 625, 958
AcuI CTGAAG 2 cut(s) 213, 1670
AfaI GTAC 5 cut(s) 42, 359, 1175, 1188, 1440
AfeI AGCGCT 1 cut(s) 981
AfiI CCNNNNNNNGG 6 cut(s) 1066, 1145, 1276, 1277, 1583, 1692
AflIII ACRYGT 1 cut(s) 577
AjiI CACGTC 1 cut(s) 580
AjnI CCWGG 4 cut(s) 29, 1144, 1461, 1576
AluBI AGCT 5 cut(s) 191, 329, 766, 1034, 1072
AluI AGCT 5 cut(s) 191, 329, 766, 1034, 1072
Alw21I GWGCWC 1 cut(s) 1437
Alw26I GTCTC 3 cut(s) 1061, 1305, 1387
Ama87I CYCGRG 1 cut(s) 1363
Aor51HI AGCGCT 1 cut(s) 981
AoxI GGCC 2 cut(s) 1147, 1360
ApeKI GCWGC 1 cut(s) 1034
ApoI RAATTY 5 cut(s) 52, 155, 510, 625, 958
ArsI GACNNNNNNTTYG 2 cut(s) 451, 483
AseI ATTAAT 1 cut(s) 480
Asp700I GAANNNNTTC 1 cut(s) 1131
AspLEI GCGC 2 cut(s) 537, 982
AspS9I GGNCC 2 cut(s) 391, 1361
AsuC2I CCSGG 2 cut(s) 1364, 1365
AsuHPI GGTGA 6 cut(s) 95, 1339, 1379, 1460, 1592, 1738
AvaI CYCGRG 1 cut(s) 1363
AvaII GGWCC 1 cut(s) 391
BaeGI GKGCMC 1 cut(s) 324
BanI GGYRCC 2 cut(s) 26, 1644
BarI GAAGNNNNNNTAC 2 cut(s) 1104, 1136
BauI CACGAG 1 cut(s) 585
BbsI GAAGAC 1 cut(s) 1124
Bbv12I GWGCWC 1 cut(s) 1437
BbvCI CCTCAGC 2 cut(s) 325, 1026
BbvI GCAGC 1 cut(s) 1021
BccI CCATC 6 cut(s) 425, 488, 493, 926, 1071, 1577
BciT130I CCWGG 4 cut(s) 31, 1146, 1463, 1578
BclI TGATCA 2 cut(s) 1339, 1708
BcnI CCSGG 2 cut(s) 1364, 1365
BcoDI GTCTC 3 cut(s) 1061, 1305, 1387
BfaI CTAG 4 cut(s) 372, 462, 1124, 1397
BfmI CTRYAG 1 cut(s) 1243
BfoI RGCGCY 1 cut(s) 983
BfuAI ACCTGC 1 cut(s) 64
BisI GCNGC 1 cut(s) 1035
BlsI GCNGC 1 cut(s) 1036
BmcAI AGTACT 1 cut(s) 1188
Bme1390I CCNGG 6 cut(s) 31, 1146, 1364, 1365, 1463, 1578
Bme18I GGWCC 1 cut(s) 391
BmeT110I CYCGRG 1 cut(s) 1363
BmgBI CACGTC 1 cut(s) 580
BmgT120I GGNCC 2 cut(s) 391, 1361
BmiI GGNNCC 3 cut(s) 28, 893, 1646
BmrFI CCNGG 6 cut(s) 31, 1146, 1364, 1365, 1463, 1578
BmsI GCATC 4 cut(s) 37, 685, 1238, 1544
BoxI GACNNNNGTC 1 cut(s) 469
BpiI GAAGAC 1 cut(s) 1124
BpmI CTGGAG 1 cut(s) 1508
Bpu10I CCTNAGC 2 cut(s) 325, 1026
BpuEI CTTGAG 5 cut(s) 634, 907, 1280, 1409, 1622
BpuMI CCSGG 2 cut(s) 1364, 1365
BsaAI YACGTR 1 cut(s) 1438
BsaJI CCNNGG 6 cut(s) 30, 258, 333, 426, 1363, 1461
BsaXI ACNNNNNCTCC 2 cut(s) 1492, 1522
Bsc4I CCNNNNNNNGG 6 cut(s) 1066, 1145, 1276, 1277, 1583, 1692
Bse1I ACTGG 1 cut(s) 1525
Bse3DI GCAATG 1 cut(s) 680
BseBI CCWGG 4 cut(s) 31, 1146, 1463, 1578
BseDI CCNNGG 6 cut(s) 30, 258, 333, 426, 1363, 1461
BseGI GGATG 4 cut(s) 52, 436, 504, 1141
BseLI CCNNNNNNNGG 6 cut(s) 1066, 1145, 1276, 1277, 1583, 1692
BseMI GCAATG 1 cut(s) 680
BseMII CTCAG 7 cut(s) 339, 781, 1001, 1017, 1086, 1197, 1429
BseNI ACTGG 1 cut(s) 1525
BseSI GKGCMC 1 cut(s) 324
BseXI GCAGC 1 cut(s) 1021
BseYI CCCAGC 2 cut(s) 344, 1685
BsgI GTGCAG 1 cut(s) 855
Bsh1236I CGCG 1 cut(s) 335
BshFI GGCC 2 cut(s) 1149, 1362
BshNI GGYRCC 2 cut(s) 26, 1644
BsiHKAI GWGCWC 1 cut(s) 1437
BsiHKCI CYCGRG 1 cut(s) 1363
BsiSI CCGG 1 cut(s) 1364
BslFI GGGAC 3 cut(s) 566, 649, 1293
BslI CCNNNNNNNGG 6 cut(s) 1066, 1145, 1276, 1277, 1583, 1692
BsmAI GTCTC 3 cut(s) 1061, 1305, 1387
BsmFI GGGAC 3 cut(s) 566, 649, 1293
BsmI GAATGC 1 cut(s) 379
BsnI GGCC 2 cut(s) 1149, 1362
BsoBI CYCGRG 1 cut(s) 1363
Bsp1286I GDGCHC 2 cut(s) 324, 1437
Bsp1407I TGTACA 1 cut(s) 357
Bsp143I GATC 4 cut(s) 835, 967, 1339, 1708
BspACI CCGC 3 cut(s) 333, 335, 1212
BspANI GGCC 2 cut(s) 1149, 1362
BspCNI CTCAG 7 cut(s) 338, 780, 1002, 1018, 1087, 1196, 1428
BspFNI CGCG 1 cut(s) 335
BspLI GGNNCC 3 cut(s) 28, 893, 1646
BspMI ACCTGC 1 cut(s) 64
BspT107I GGYRCC 2 cut(s) 26, 1644
BsrDI GCAATG 1 cut(s) 680
BsrGI TGTACA 1 cut(s) 357
BsrI ACTGG 1 cut(s) 1525
BssECI CCNNGG 6 cut(s) 30, 258, 333, 426, 1363, 1461
BssMI GATC 4 cut(s) 835, 967, 1339, 1708
BssSI CACGAG 1 cut(s) 585
BssT1I CCWWGG 2 cut(s) 258, 426
Bst2BI CACGAG 1 cut(s) 585
Bst2UI CCWGG 4 cut(s) 31, 1146, 1463, 1578
Bst4CI ACNGT 3 cut(s) 1173, 1178, 1477
Bst6I CTCTTC 4 cut(s) 1107, 1419, 1509, 1646
BstAUI TGTACA 1 cut(s) 357
BstBAI YACGTR 1 cut(s) 1438
BstC8I GCNNGC 6 cut(s) 25, 241, 245, 377, 870, 1290
BstDEI CTNAG 8 cut(s) 325, 767, 1010, 1026, 1095, 1183, 1352, 1415
BstDSI CCRYGG 1 cut(s) 333
BstF5I GGATG 4 cut(s) 52, 436, 504, 1141
BstFNI CGCG 1 cut(s) 335
BstH2I RGCGCY 1 cut(s) 983
BstHHI GCGC 2 cut(s) 537, 982
BstKTI GATC 4 cut(s) 838, 970, 1342, 1711
BstMAI GTCTC 3 cut(s) 1061, 1305, 1387
BstMBI GATC 4 cut(s) 835, 967, 1339, 1708
BstMWI GCNNNNNNNGC 3 cut(s) 541, 1031, 1100
BstNI CCWGG 4 cut(s) 31, 1146, 1463, 1578
BstNSI RCATGY 1 cut(s) 1672
BstPAI GACNNNNGTC 1 cut(s) 469
BstSCI CCNGG 6 cut(s) 29, 1144, 1362, 1363, 1461, 1576
BstSFI CTRYAG 1 cut(s) 1243
BstSLI GKGCMC 1 cut(s) 324
BstUI CGCG 1 cut(s) 335
BstV1I GCAGC 1 cut(s) 1021
BstV2I GAAGAC 1 cut(s) 1124
BsuRI GGCC 2 cut(s) 1149, 1362
BtgI CCRYGG 1 cut(s) 333
BtgZI GCGATG 1 cut(s) 1567
BtrI CACGTC 1 cut(s) 580
BtsCI GGATG 4 cut(s) 52, 436, 504, 1141
BtsI GCAGTG 1 cut(s) 539
BtsIMutI CAGTG 3 cut(s) 324, 539, 1183
BveI ACCTGC 1 cut(s) 64
Cac8I GCNNGC 6 cut(s) 25, 241, 245, 377, 870, 1290
CfoI GCGC 2 cut(s) 537, 982
Cfr13I GGNCC 2 cut(s) 391, 1361
Cfr42I CCGCGG 1 cut(s) 336
Cfr9I CCCGGG 1 cut(s) 1363
Csp6I GTAC 5 cut(s) 41, 358, 1174, 1187, 1439
CviAII CATG 8 cut(s) 89, 805, 865, 941, 1272, 1411, 1518, 1669
CviQI GTAC 5 cut(s) 41, 358, 1174, 1187, 1439
DdeI CTNAG 8 cut(s) 325, 767, 1010, 1026, 1095, 1183, 1352, 1415
DpnI GATC 4 cut(s) 837, 969, 1341, 1710
DpnII GATC 4 cut(s) 835, 967, 1339, 1708
Eam1104I CTCTTC 4 cut(s) 1107, 1419, 1509, 1646
EarI CTCTTC 4 cut(s) 1107, 1419, 1509, 1646
Eco130I CCWWGG 2 cut(s) 258, 426
Eco32I GATATC 2 cut(s) 844, 1408
Eco47I GGWCC 1 cut(s) 391
Eco47III AGCGCT 1 cut(s) 981
Eco57I CTGAAG 2 cut(s) 213, 1670
Eco88I CYCGRG 1 cut(s) 1363
EcoRII CCWGG 4 cut(s) 29, 1144, 1461, 1576
EcoRV GATATC 2 cut(s) 844, 1408
EcoT14I CCWWGG 2 cut(s) 258, 426
ErhI CCWWGG 2 cut(s) 258, 426
FaeI CATG 8 cut(s) 92, 808, 868, 944, 1275, 1414, 1521, 1672
FalI AAGNNNNNCTT 4 cut(s) 257, 289, 966, 998
FaqI GGGAC 3 cut(s) 566, 649, 1293
FatI CATG 8 cut(s) 88, 804, 864, 940, 1271, 1410, 1517, 1668
FauI CCCGC 2 cut(s) 340, 1219
FauNDI CATATG 3 cut(s) 546, 1680, 1691
FbaI TGATCA 2 cut(s) 1339, 1708
Fnu4HI GCNGC 1 cut(s) 1035
FokI GGATG 4 cut(s) 59, 443, 511, 1128
Fsp4HI GCNGC 1 cut(s) 1035
FspBI CTAG 4 cut(s) 372, 462, 1124, 1397
FspI TGCGCA 1 cut(s) 536
GlaI GCGC 2 cut(s) 536, 981
GluI GCNGC 1 cut(s) 1035
GsaI CCCAGC 2 cut(s) 348, 1689
GsuI CTGGAG 1 cut(s) 1508
HaeII RGCGCY 1 cut(s) 983
HaeIII GGCC 2 cut(s) 1149, 1362
HapII CCGG 1 cut(s) 1364
HhaI GCGC 2 cut(s) 537, 982
Hin1II CATG 8 cut(s) 92, 808, 868, 944, 1275, 1414, 1521, 1672
Hin6I GCGC 2 cut(s) 535, 980
HinP1I GCGC 2 cut(s) 535, 980
HincII GTYRAC 1 cut(s) 816
HindII GTYRAC 1 cut(s) 816
HinfI GANTC 8 cut(s) 11, 314, 728, 737, 860, 1481, 1564, 1604
HpaI GTTAAC 1 cut(s) 816
HpaII CCGG 1 cut(s) 1364
HphI GGTGA 6 cut(s) 95, 1339, 1379, 1460, 1592, 1738
Hpy166II GTNNAC 4 cut(s) 134, 816, 1262, 1480
Hpy188I TCNGA 4 cut(s) 206, 649, 770, 827
Hpy188III TCNNGA 5 cut(s) 288, 518, 587, 613, 839
Hpy8I GTNNAC 4 cut(s) 134, 816, 1262, 1480
HpyAV CCTTC 8 cut(s) 154, 188, 259, 263, 905, 1012, 1467, 1605
HpyCH4III ACNGT 3 cut(s) 1173, 1178, 1477
HpyCH4IV ACGT 4 cut(s) 579, 608, 1064, 1437
HpyCH4V TGCA 9 cut(s) 50, 80, 544, 716, 747, 777, 872, 1206, 1251
HpyF10VI GCNNNNNNNGC 3 cut(s) 541, 1031, 1100
HpyF3I CTNAG 8 cut(s) 325, 767, 1010, 1026, 1095, 1183, 1352, 1415
HpySE526I ACGT 4 cut(s) 579, 608, 1064, 1437
Hsp92II CATG 8 cut(s) 92, 808, 868, 944, 1275, 1414, 1521, 1672
HspAI GCGC 2 cut(s) 535, 980
Ksp22I TGATCA 2 cut(s) 1339, 1708
KspAI GTTAAC 1 cut(s) 816
KspI CCGCGG 1 cut(s) 336
Kzo9I GATC 4 cut(s) 835, 967, 1339, 1708
LmnI GCTCC 5 cut(s) 334, 977, 1069, 1432, 1665
Lsp1109I GCAGC 1 cut(s) 1021
LweI GCATC 4 cut(s) 37, 685, 1238, 1544
MaeI CTAG 4 cut(s) 372, 462, 1124, 1397
MaeII ACGT 4 cut(s) 579, 608, 1064, 1437
MaeIII GTNAC 2 cut(s) 1158, 1498
MalI GATC 4 cut(s) 837, 969, 1341, 1710
MboI GATC 4 cut(s) 835, 967, 1339, 1708
MboII GAAGA 8 cut(s) 242, 820, 967, 1124, 1124, 1436, 1496, 1663
MfeI CAATTG 2 cut(s) 854, 1283
MhlI GDGCHC 2 cut(s) 324, 1437
MlyI GAGTC 2 cut(s) 1475, 1613
MmeI TCCRAC 4 cut(s) 850, 925, 1047, 1217
MroXI GAANNNNTTC 1 cut(s) 1131
MslI CAYNNNNRTG 1 cut(s) 1516
MspA1I CMGCKG 1 cut(s) 335
MspI CCGG 1 cut(s) 1364
MspR9I CCNGG 6 cut(s) 31, 1146, 1364, 1365, 1463, 1578
MunI CAATTG 2 cut(s) 854, 1283
Mva1269I GAATGC 1 cut(s) 379
MvaI CCWGG 4 cut(s) 31, 1146, 1463, 1578
MvnI CGCG 1 cut(s) 335
MwoI GCNNNNNNNGC 3 cut(s) 541, 1031, 1100
NciI CCSGG 2 cut(s) 1364, 1365
NdeI CATATG 3 cut(s) 546, 1680, 1691
NdeII GATC 4 cut(s) 835, 967, 1339, 1708
NlaIII CATG 8 cut(s) 92, 808, 868, 944, 1275, 1414, 1521, 1672
NlaIV GGNNCC 3 cut(s) 28, 893, 1646
NmeAIII GCCGAG 1 cut(s) 1129
NmuCI GTSAC 1 cut(s) 1498
NsbI TGCGCA 1 cut(s) 536
NspI RCATGY 1 cut(s) 1672
PcsI WCGNNNNNNNCGW 1 cut(s) 715
PctI GAATGC 1 cut(s) 379
PdmI GAANNNNTTC 1 cut(s) 1131
PfeI GAWTC 6 cut(s) 11, 314, 728, 737, 860, 1564
PflMI CCANNNNNTGG 3 cut(s) 1066, 1145, 1692
PkrI GCNGC 1 cut(s) 1036
PleI GAGTC 2 cut(s) 1475, 1612
PpsI GAGTC 2 cut(s) 1475, 1612
Ppu21I YACGTR 1 cut(s) 1438
PshAI GACNNNNGTC 1 cut(s) 469
PshBI ATTAAT 1 cut(s) 480
Psp1406I AACGTT 1 cut(s) 608
Psp6I CCWGG 4 cut(s) 29, 1144, 1461, 1576
PspFI CCCAGC 2 cut(s) 344, 1685
PspGI CCWGG 4 cut(s) 29, 1144, 1461, 1576
PspN4I GGNNCC 3 cut(s) 28, 893, 1646
PspPI GGNCC 2 cut(s) 391, 1361
RsaI GTAC 5 cut(s) 42, 359, 1175, 1188, 1440
RsaNI GTAC 5 cut(s) 41, 358, 1174, 1187, 1439
RseI CAYNNNNRTG 1 cut(s) 1516
SacII CCGCGG 1 cut(s) 336
SatI GCNGC 1 cut(s) 1035
Sau3AI GATC 4 cut(s) 835, 967, 1339, 1708
Sau96I GGNCC 2 cut(s) 391, 1361
ScaI AGTACT 1 cut(s) 1188
SchI GAGTC 2 cut(s) 1475, 1613
ScrFI CCNGG 6 cut(s) 31, 1146, 1364, 1365, 1463, 1578
SduI GDGCHC 2 cut(s) 324, 1437
SfaNI GCATC 4 cut(s) 37, 685, 1238, 1544
SfcI CTRYAG 1 cut(s) 1243
Sfr303I CCGCGG 1 cut(s) 336
SgrBI CCGCGG 1 cut(s) 336
SinI GGWCC 1 cut(s) 391
SmaI CCCGGG 1 cut(s) 1365
SmiMI CAYNNNNRTG 1 cut(s) 1516
SmlI CTYRAG 5 cut(s) 613, 886, 1295, 1388, 1601
SmoI CTYRAG 5 cut(s) 613, 886, 1295, 1388, 1601
SsiI CCGC 3 cut(s) 333, 335, 1212
SspMI CTAG 4 cut(s) 372, 462, 1124, 1397
StyD4I CCNGG 6 cut(s) 29, 1144, 1362, 1363, 1461, 1576
StyI CCWWGG 2 cut(s) 258, 426
TaaI ACNGT 3 cut(s) 1173, 1178, 1477
TaiI ACGT 4 cut(s) 582, 611, 1067, 1440
TaqI TCGA 2 cut(s) 709, 1075
TatI WGTACW 4 cut(s) 40, 357, 1173, 1186
TfiI GAWTC 6 cut(s) 11, 314, 728, 737, 860, 1564
TscAI CASTG 3 cut(s) 324, 546, 1183
TseFI GTSAC 1 cut(s) 1498
TseI GCWGC 1 cut(s) 1034
Tsp45I GTSAC 1 cut(s) 1498
TspDTI ATGAA 7 cut(s) 168, 372, 459, 587, 821, 1334, 1506
TspMI CCCGGG 1 cut(s) 1363
TspRI CASTG 3 cut(s) 324, 546, 1183
Van91I CCANNNNNTGG 3 cut(s) 1066, 1145, 1692
VpaK11BI GGWCC 1 cut(s) 391
VspI ATTAAT 1 cut(s) 480
XapI RAATTY 5 cut(s) 52, 155, 510, 625, 958
XceI RCATGY 1 cut(s) 1672
XmaI CCCGGG 1 cut(s) 1363
XmnI GAANNNNTTC 1 cut(s) 1131
XspI CTAG 4 cut(s) 372, 462, 1124, 1397
ZrmI AGTACT 1 cut(s) 1188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.