Rmu_sc0004657.1_g000070

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004657.1
OG0000546
Physical Location & Seq
Forward (+)
300991 .. 307171
6181 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004657.1_g000070.1.cds

Sequence Viewer

Length: 2712 bp
atggccggtgacgtgggtatgttcaagttcttgaagcccaagagtcgtcctcaccacgtggatatcaagccgctgccttgtggggtgtcgctgccggcaccaccgctctttggaatatcgtcgacctggcaccgcattttcctcccctcttcagcctgcaacacaaaaccagcgcagacagcagccccgtcgtcgctcatttttgcgtgcacagacgagtttgctatccccgcagccacctgggagacccggtcgacaaactcggatcttctcccccactaccggatggaatcgcccgagagttcgaaacccgaggaagtgaagcacccaaaggaggtcgtggaagaggagaaatttaagtttggtctgcagtcaggacggcttaagccgccgccgcggatgagtgttccagtgattgacaatgcatcctcgacatgggacattatgaggggcttagggccccaaggtcaaacttctcatgaagaagtagaagaaaaggataatttgattacttctgatgatgaagaagatcatatttcgattaaagagattgtatcgagctccgggtattcttctactacttggaatgacgatgactcttctagcactaccacagacccctccatttcttcttgggaaaaggaaacctctcgcgggtatttacccctgtatgaaggaatttccgataaggtaactaaaacgatggatcccctgaagacccgacagaagccaaagttcgttaggtgcaatgcgctgaagcacattgactatgatgctgttacatcgacttcctcctcgctctgccaccactctgcggggtcaccactctactcaggctcggtcaatatttcagaccggacgagcttccaagtagaagaaaacgacggtgagttcgaacagatatgcaaggtgttgggattctcctgccctgagtccttggagttccactcgatgaactcggaattgaagctaaaggagaactgcaatcgcaaagaaatggaagaagtagaaattgataaaagagctgatgaagaaactaatttgagagcagaagaaaacttcaaattaccaggagtattacataatagcgcttcttcttttatgcatccagaactgttgggggagccaaatgagaagctgatttcttcagaaataaatttgtcagagtcattggaattgaaggaaagctatgcaaatttgcaagaaatggttgtgcatgaagatgaagaatatgacagtttacccaaacaattaaaaagaacaaaagttttcttgtgccttggaggaggaaatccactcaagctttcacgtttgggaaggacaattgctccgtttgagtatttcgtagctgtggatggtaggttggatggtgccttggaaatgacacagcatttgtctttaatttgcaaagacattgatgagatgacttttggggttcttaaaaaatttaagcatttgcgtacacttcttgtgcttgctggttgtggatcttccatcaaatatgttcctcgtgatctgtttttgagcttaagggaattgagaacactgaatttgagtcaaacactcgtctctgaattgccaagttccattcgaaatgcaaagtcattacgataccttgatctctccaatactcttattacaaggttgccggaatcaatagattctcttcacacttcacagacagtaagactcagaggttgtgtacactttcttcaattaccaaaggggatgaagaagctaatcaatctacgacatatcgatttggatatcattcgacagttaaggtccatgcttccccatttgggaagcttaaccaaccttcagactttgccagcatttcttgttggtctagatgctgggtgccatataggagagcttaagaatttgaatgatctcagaggagtacttcgcatttcaaggcttgaaaatgtatcatgccaggaagaggctaaggcagctgctttgatcgaaaagatatacctgcaaaggctggagctccgctggagtagtgtgttaaccgagaatacggaagagcaagagaaaattcttgaatgtcttcaaccccatgctggccttaaagagctacaaatacaacaatatgccgggtcaagatttccaacttggattagcaatccatgttttactgaacttattgttcttactctctacagatgcaaacactgtgagcttctcccatctgttgggcagttaccaatgctaaagtctctttctattatagaaatgaatgaggtgaaagaaatcaacgaccagtttttgggaaagaaaaacccagttgatcaagggtttcatgcattttcgaaactggagatactagaagttgacatcatgctcaatttgaaactgtggaaggatgtaaacattggtgacttaccttccttacttaaactcacagttgattcttgccctgaacttaccactcttccatcactgtcttggctcaaatccctcaagcatttggaactcaggcgctgtccaaaaattctgacctggccttgtgatggactaccagcatcacttgaatctttcatagtaatagattgcccggaactgaaagaatggtgccgcgtgatggaaggtgaagattggaggaagaaatgccatctccctagcatatggcttgattgtgaagaggtaagtcaacttaaaacagtttgttttgctcttatgtctctgcttcttgctctggggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 ko04016 ko04075 ko04931 map04014 map04016 map04075 map04931
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

903

Amino Acids

101.78

Weight (kDa)

5.67

Isoelectric Point (pI)

51.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000546)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_4g25760 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700 FvH4_5g34700
malus_domestica MD14G1049300.v1.1
rosa_chinensis RchiOBHm_Chr4g0433201 RchiOBHm_Chr6g0255111 RchiOBHm_Chr7g0235301 RchiOBHm_Chr7g0235351 RchiOBHm_Chr7g0235361 RchiOBHm_Chr7g0235381
rosa_laevigata RLG00000001164 RLG00000013941
rosa_multiflora Rmu_co8331033.1_g000001 Rmu_co8369635.1_g000001 Rmu_sc0000957.1_g000010 Rmu_sc0003304.1_g000033 Rmu_sc0003304.1_g000041 Rmu_sc0003488.1_g000001 Rmu_sc0004529.1_g000036 Rmu_sc0004637.1_g000013 Rmu_sc0004657.1_g000070 Rmu_sc0004657.1_g000076 Rmu_sc0006578.1_g000004 Rmu_sc0011027.1_g000008 Rmu_sc0011027.1_g000010 Rmu_sc0013813.1_g000001 Rmu_sc0014112.1_g000001 Rmu_sc0014112.1_g000002 Rmu_sc0014112.1_g000004 Rmu_ssc0000011.1_g000040 Rmu_ssc0000295.1_g000011
rosa_roxburghii Rroxscaffold_2G00103040 Rroxscaffold_3G00226100 Rroxscaffold_3G00226120 Rroxscaffold_5G00374710 Rroxscaffold_5G00374720 Rroxscaffold_7G00200160 Rroxscaffold_7G00200190
rosa_rugosa Rorug05G0474400 Rorug05G0474400 Rorug06G0037400 Rorug06G0037500 Rorug06G0037600 Rorug06G0038300 Rorug06G0038300 Rorug06G0038400 Rorug06G0038500 Rorug07G0289800 Rorug07G0289900 Rorug07G0290000 Rorug07G0290000
rosa_samantha Rh4AG320500 Rh4AG320700 Rh4AG321100 Rh4DG324200 Rh4DG324700 Rh6BG067500 Rh6CG066600 Rh6CG066700 Rh6DG063600 Rh6DG063700 Rh6DG147600 Rh7AG444800 Rh7AG445000 Rh7BG416700 Rh7BG416800 Rh7CG465200 Rh7CG465300 Rh7CG465700 Rh7DG433600 Rh7DG433800
rosa_wichuraiana Rw0G008730 Rw0G008770 Rw4G027830 Rw7G036940 Rw7G036980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1989
AccB1I GGYRCC 5 cut(s) 97, 129, 1370, 1860, 2580
AccB7I CCANNNNNTGG 2 cut(s) 2201, 2275
AccBSI CCGCTC 1 cut(s) 106
AccI GTMKAC 2 cut(s) 122, 254
AccII CGCG 3 cut(s) 397, 654, 2586
AclWI GGATC 4 cut(s) 273, 701, 714, 1495
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 9 cut(s) 353, 678, 1156, 1195, 1445, 1549, 1882, 2043, 2499
AcuI CTGAAG 5 cut(s) 135, 734, 776, 1131, 1805
AcvI CACGTG 1 cut(s) 58
AdeI CACNNNGTG 1 cut(s) 58
AfaI GTAC 3 cut(s) 1462, 1704, 1905
AfeI AGCGCT 1 cut(s) 1090
AflII CTTAAG 3 cut(s) 383, 1528, 1877
AjiI CACGTC 1 cut(s) 13
AjnI CCWGG 5 cut(s) 125, 239, 1069, 1938, 2507
Alw21I GWGCWC 3 cut(s) 212, 563, 1998
Alw26I GTCTC 4 cut(s) 239, 1573, 2229, 2694
Alw44I GTGCAC 1 cut(s) 208
AlwI GGATC 4 cut(s) 273, 701, 714, 1495
AlwNI CAGNNNCTG 1 cut(s) 2490
Ama87I CYCGRG 2 cut(s) 296, 311
Aor51HI AGCGCT 1 cut(s) 1090
AoxI GGCC 4 cut(s) 3, 458, 2071, 2510
ApaI GGGCCC 1 cut(s) 462
ApaLI GTGCAC 1 cut(s) 208
ApeKI GCWGC 6 cut(s) 73, 91, 182, 233, 1955, 1958
ApoI RAATTY 9 cut(s) 353, 678, 1156, 1195, 1445, 1549, 1882, 2043, 2499
ArsI GACNNNNNNTTYG 4 cut(s) 875, 907, 1375, 1407
Asp700I GAANNNNTTC 1 cut(s) 2055
AspLEI GCGC 4 cut(s) 175, 754, 1091, 2490
AspS9I GGNCC 3 cut(s) 458, 459, 1785
AsuC2I CCSGG 4 cut(s) 250, 565, 2104, 2564
AsuHPI GGTGA 7 cut(s) 20, 44, 813, 899, 2263, 2396, 2609
AsuII TTCGAA 4 cut(s) 305, 894, 1591, 2318
AvaI CYCGRG 2 cut(s) 296, 311
AvaII GGWCC 1 cut(s) 1785
BaeGI GKGCMC 2 cut(s) 212, 462
BamHI GGATCC 1 cut(s) 706
BanI GGYRCC 5 cut(s) 97, 129, 1370, 1860, 2580
BanII GRGCYC 3 cut(s) 462, 563, 1998
BarI GAAGNNNNNNTAC 2 cut(s) 1695, 1727
BauI CACGAG 1 cut(s) 1509
BbrPI CACGTG 1 cut(s) 58
BbsI GAAGAC 2 cut(s) 722, 2048
Bbv12I GWGCWC 3 cut(s) 212, 563, 1998
BbvI GCAGC 6 cut(s) 60, 78, 194, 245, 1945, 1967
BceAI ACGGC 1 cut(s) 395
BcgI CGANNNNNNTGC 2 cut(s) 171, 205
BciT130I CCWGG 5 cut(s) 127, 241, 1071, 1940, 2509
BclI TGATCA 1 cut(s) 2296
BcnI CCSGG 4 cut(s) 250, 565, 2104, 2564
BcoDI GTCTC 4 cut(s) 239, 1573, 2229, 2694
BfaI CTAG 4 cut(s) 603, 1850, 2333, 2628
BfmI CTRYAG 2 cut(s) 368, 2167
BfoI RGCGCY 2 cut(s) 1092, 2491
BfrI CTTAAG 3 cut(s) 383, 1528, 1877
BfuAI ACCTGC 1 cut(s) 1989
BmcAI AGTACT 1 cut(s) 1905
Bme1390I CCNGG 9 cut(s) 127, 241, 250, 565, 1071, 1940, 2104, 2509, 2564
Bme18I GGWCC 1 cut(s) 1785
BmeT110I CYCGRG 2 cut(s) 296, 311
BmgBI CACGTC 1 cut(s) 13
BmgT120I GGNCC 3 cut(s) 458, 459, 1785
BmiI GGNNCC 9 cut(s) 99, 131, 460, 461, 708, 1125, 1372, 1862, 2582
BmrFI CCNGG 9 cut(s) 127, 241, 250, 565, 1071, 1940, 2104, 2509, 2564
BmrI ACTGGG 1 cut(s) 2285
BmsI GCATC 6 cut(s) 434, 763, 1114, 1843, 2162, 2540
BmuI ACTGGG 1 cut(s) 2285
BpiI GAAGAC 2 cut(s) 722, 2048
BplI GAGNNNNNCTC 4 cut(s) 34, 66, 932, 964
BpmI CTGGAG 3 cut(s) 2012, 2023, 2345
Bpu10I CCTNAGC 2 cut(s) 454, 1950
Bpu14I TTCGAA 4 cut(s) 305, 894, 1591, 2318
BpuEI CTTGAG 2 cut(s) 1283, 2453
BpuMI CCSGG 4 cut(s) 250, 565, 2104, 2564
Bsa29I ATCGAT 1 cut(s) 1758
BsaAI YACGTR 1 cut(s) 58
BsaI GGTCTC 1 cut(s) 239
BsaJI CCNNGG 7 cut(s) 240, 312, 395, 463, 936, 1279, 1374
BsaWI WCCGGW 2 cut(s) 282, 855
BsaXI ACNNNNNCTCC 4 cut(s) 236, 266, 1312, 1342
Bse118I RCCGGY 2 cut(s) 5, 94
Bse1I ACTGG 4 cut(s) 410, 2269, 2291, 2328
Bse3DI GCAATG 1 cut(s) 754
BseBI CCWGG 5 cut(s) 127, 241, 1071, 1940, 2509
BseCI ATCGAT 1 cut(s) 1758
BseDI CCNNGG 7 cut(s) 240, 312, 395, 463, 936, 1279, 1374
BseGI GGATG 8 cut(s) 291, 405, 425, 1105, 1360, 1372, 1734, 2377
BseMI GCAATG 1 cut(s) 754
BseMII CTCAG 5 cut(s) 846, 921, 1705, 1909, 2497
BseNI ACTGG 4 cut(s) 410, 2269, 2291, 2328
BseRI GAGGAG 4 cut(s) 362, 784, 1299, 1914
BseSI GKGCMC 2 cut(s) 212, 462
BseXI GCAGC 6 cut(s) 60, 78, 194, 245, 1945, 1967
BseYI CCCAGC 1 cut(s) 1856
Bsh1236I CGCG 3 cut(s) 397, 654, 2586
Bsh1285I CGRYCG 1 cut(s) 254
BshFI GGCC 4 cut(s) 5, 460, 2073, 2512
BshNI GGYRCC 5 cut(s) 97, 129, 1370, 1860, 2580
BshVI ATCGAT 1 cut(s) 1758
BsiEI CGRYCG 1 cut(s) 254
BsiHKAI GWGCWC 3 cut(s) 212, 563, 1998
BsiHKCI CYCGRG 2 cut(s) 296, 311
BsiSI CCGG 9 cut(s) 6, 95, 250, 283, 564, 856, 1649, 2103, 2564
BslFI GGGAC 1 cut(s) 452
BsmAI GTCTC 4 cut(s) 239, 1573, 2229, 2694
BsmBI CGTCTC 1 cut(s) 1573
BsmFI GGGAC 1 cut(s) 452
BsnI GGCC 4 cut(s) 5, 460, 2073, 2512
Bso31I GGTCTC 1 cut(s) 239
BsoBI CYCGRG 2 cut(s) 296, 311
Bsp119I TTCGAA 4 cut(s) 305, 894, 1591, 2318
Bsp120I GGGCCC 1 cut(s) 458
Bsp1286I GDGCHC 4 cut(s) 212, 462, 563, 1998
Bsp1407I TGTACA 1 cut(s) 1702
Bsp143I GATC 9 cut(s) 265, 529, 706, 1487, 1513, 1618, 1891, 1965, 2296
BspANI GGCC 4 cut(s) 5, 460, 2073, 2512
BspCNI CTCAG 5 cut(s) 845, 922, 1704, 1908, 2496
BspDI ATCGAT 1 cut(s) 1758
BspFNI CGCG 3 cut(s) 397, 654, 2586
BspHI TCATGA 1 cut(s) 478
BspLI GGNNCC 9 cut(s) 99, 131, 460, 461, 708, 1125, 1372, 1862, 2582
BspMAI CTGCAG 1 cut(s) 372
BspMI ACCTGC 1 cut(s) 1989
BspPI GGATC 4 cut(s) 273, 701, 714, 1495
BspQI GCTCTTC 1 cut(s) 2025
BspT104I TTCGAA 4 cut(s) 305, 894, 1591, 2318
BspT107I GGYRCC 5 cut(s) 97, 129, 1370, 1860, 2580
BspTI CTTAAG 3 cut(s) 383, 1528, 1877
BspTNI GGTCTC 1 cut(s) 239
BsrBI CCGCTC 1 cut(s) 106
BsrDI GCAATG 1 cut(s) 754
BsrFI RCCGGY 2 cut(s) 5, 94
BsrGI TGTACA 1 cut(s) 1702
BsrI ACTGG 4 cut(s) 410, 2269, 2291, 2328
BssAI RCCGGY 2 cut(s) 5, 94
BssECI CCNNGG 7 cut(s) 240, 312, 395, 463, 936, 1279, 1374
BssMI GATC 9 cut(s) 265, 529, 706, 1487, 1513, 1618, 1891, 1965, 2296
BssSI CACGAG 1 cut(s) 1509
BssT1I CCWWGG 4 cut(s) 463, 936, 1279, 1374
Bst2BI CACGAG 1 cut(s) 1509
Bst2UI CCWGG 5 cut(s) 127, 241, 1071, 1940, 2509
Bst6I CTCTTC 8 cut(s) 154, 339, 604, 1671, 1938, 2025, 2445, 2643
BstAFI CTTAAG 3 cut(s) 383, 1528, 1877
BstAUI TGTACA 1 cut(s) 1702
BstBAI YACGTR 1 cut(s) 58
BstBI TTCGAA 4 cut(s) 305, 894, 1591, 2318
BstC8I GCNNGC 6 cut(s) 96, 157, 208, 1476, 1833, 2071
BstDEI CTNAG 7 cut(s) 454, 832, 930, 1691, 1895, 1950, 2483
BstDSI CCRYGG 1 cut(s) 395
BstEII GGTNACC 1 cut(s) 819
BstF5I GGATG 8 cut(s) 291, 405, 425, 1105, 1360, 1372, 1734, 2377
BstFNI CGCG 3 cut(s) 397, 654, 2586
BstH2I RGCGCY 2 cut(s) 1092, 2491
BstHHI GCGC 4 cut(s) 175, 754, 1091, 2490
BstKTI GATC 9 cut(s) 268, 532, 709, 1490, 1516, 1621, 1894, 1968, 2299
BstMAI GTCTC 4 cut(s) 239, 1573, 2229, 2694
BstMBI GATC 9 cut(s) 265, 529, 706, 1487, 1513, 1618, 1891, 1965, 2296
BstMCI CGRYCG 1 cut(s) 254
BstMWI GCNNNNNNNGC 5 cut(s) 179, 230, 388, 394, 1955
BstNI CCWGG 5 cut(s) 127, 241, 1071, 1940, 2509
BstPI GGTNACC 1 cut(s) 819
BstSCI CCNGG 9 cut(s) 125, 239, 248, 563, 1069, 1938, 2102, 2507, 2562
BstSFI CTRYAG 2 cut(s) 368, 2167
BstSLI GKGCMC 2 cut(s) 212, 462
BstUI CGCG 3 cut(s) 397, 654, 2586
BstV1I GCAGC 6 cut(s) 60, 78, 194, 245, 1945, 1967
BstV2I GAAGAC 2 cut(s) 722, 2048
BstX2I RGATCY 3 cut(s) 265, 706, 1487
BstYI RGATCY 3 cut(s) 265, 706, 1487
Bsu15I ATCGAT 1 cut(s) 1758
BsuRI GGCC 4 cut(s) 5, 460, 2073, 2512
BsuTUI ATCGAT 1 cut(s) 1758
BtgI CCRYGG 1 cut(s) 395
BtrI CACGTC 1 cut(s) 13
BtsCI GGATG 8 cut(s) 291, 405, 425, 1105, 1360, 1372, 1734, 2377
BtsIMutI CAGTG 4 cut(s) 417, 1544, 2179, 2447
BveI ACCTGC 1 cut(s) 1989
Cac8I GCNNGC 6 cut(s) 96, 157, 208, 1476, 1833, 2071
CaiI CAGNNNCTG 1 cut(s) 2490
CciI TCATGA 1 cut(s) 478
CfoI GCGC 4 cut(s) 175, 754, 1091, 2490
Cfr10I RCCGGY 2 cut(s) 5, 94
Cfr13I GGNCC 3 cut(s) 458, 459, 1785
Cfr42I CCGCGG 1 cut(s) 398
ClaI ATCGAT 1 cut(s) 1758
Csp6I GTAC 3 cut(s) 1461, 1703, 1904
CviAII CATG 9 cut(s) 435, 479, 1217, 1789, 1935, 2066, 2136, 2309, 2347
CviQI GTAC 3 cut(s) 1461, 1703, 1904
DdeI CTNAG 7 cut(s) 454, 832, 930, 1691, 1895, 1950, 2483
DpnI GATC 9 cut(s) 267, 531, 708, 1489, 1515, 1620, 1893, 1967, 2298
DpnII GATC 9 cut(s) 265, 529, 706, 1487, 1513, 1618, 1891, 1965, 2296
DraIII CACNNNGTG 1 cut(s) 58
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 8 cut(s) 154, 339, 604, 1671, 1938, 2025, 2445, 2643
EarI CTCTTC 8 cut(s) 154, 339, 604, 1671, 1938, 2025, 2445, 2643
Ecl136II GAGCTC 2 cut(s) 561, 1996
Eco130I CCWWGG 4 cut(s) 463, 936, 1279, 1374
Eco24I GRGCYC 3 cut(s) 462, 563, 1998
Eco31I GGTCTC 1 cut(s) 239
Eco32I GATATC 2 cut(s) 64, 1768
Eco47I GGWCC 1 cut(s) 1785
Eco47III AGCGCT 1 cut(s) 1090
Eco53kI GAGCTC 2 cut(s) 561, 1996
Eco57I CTGAAG 5 cut(s) 135, 734, 776, 1131, 1805
Eco72I CACGTG 1 cut(s) 58
Eco88I CYCGRG 2 cut(s) 296, 311
Eco91I GGTNACC 1 cut(s) 819
EcoICRI GAGCTC 2 cut(s) 561, 1996
EcoO109I RGGNCCY 2 cut(s) 458, 459
EcoO65I GGTNACC 1 cut(s) 819
EcoRII CCWGG 5 cut(s) 125, 239, 1069, 1938, 2507
EcoRV GATATC 2 cut(s) 64, 1768
EcoT14I CCWWGG 4 cut(s) 463, 936, 1279, 1374
EcoT22I ATGCAT 3 cut(s) 427, 1107, 2314
EcoT38I GRGCYC 3 cut(s) 462, 563, 1998
ErhI CCWWGG 4 cut(s) 463, 936, 1279, 1374
Esp3I CGTCTC 1 cut(s) 1573
FaeI CATG 9 cut(s) 438, 482, 1220, 1792, 1938, 2069, 2139, 2312, 2350
FaqI GGGAC 1 cut(s) 452
FatI CATG 9 cut(s) 434, 478, 1216, 1788, 1934, 2065, 2135, 2308, 2346
FauI CCCGC 3 cut(s) 238, 647, 808
FauNDI CATATG 1 cut(s) 2633
FbaI TGATCA 1 cut(s) 2296
FblI GTMKAC 2 cut(s) 122, 254
FokI GGATG 8 cut(s) 298, 412, 412, 1092, 1367, 1379, 1741, 2384
FriOI GRGCYC 3 cut(s) 462, 563, 1998
FspBI CTAG 4 cut(s) 603, 1850, 2333, 2628
GlaI GCGC 4 cut(s) 174, 753, 1090, 2489
GsaI CCCAGC 1 cut(s) 1860
GsuI CTGGAG 3 cut(s) 2012, 2023, 2345
HaeII RGCGCY 2 cut(s) 1092, 2491
HaeIII GGCC 4 cut(s) 5, 460, 2073, 2512
HapII CCGG 9 cut(s) 6, 95, 250, 283, 564, 856, 1649, 2103, 2564
HhaI GCGC 4 cut(s) 175, 754, 1091, 2490
Hin1II CATG 9 cut(s) 438, 482, 1220, 1792, 1938, 2069, 2139, 2312, 2350
Hin6I GCGC 4 cut(s) 173, 752, 1089, 2488
HinP1I GCGC 4 cut(s) 173, 752, 1089, 2488
HincII GTYRAC 5 cut(s) 123, 255, 2016, 2341, 2660
HindII GTYRAC 5 cut(s) 123, 255, 2016, 2341, 2660
HindIII AAGCTT 2 cut(s) 1301, 1807
HpaI GTTAAC 1 cut(s) 2016
HpaII CCGG 9 cut(s) 6, 95, 250, 283, 564, 856, 1649, 2103, 2564
HphI GGTGA 7 cut(s) 20, 44, 813, 899, 2263, 2396, 2609
Hpy188III TCNNGA 8 cut(s) 31, 375, 479, 1109, 1511, 1850, 2048, 2109
Hpy99I CGWCG 4 cut(s) 124, 193, 196, 887
HpyAV CCTTC 7 cut(s) 668, 1174, 1311, 1829, 2362, 2403, 2588
HpyCH4IV ACGT 3 cut(s) 12, 57, 1309
HpyF10VI GCNNNNNNNGC 5 cut(s) 179, 230, 388, 394, 1955
HpyF3I CTNAG 7 cut(s) 454, 832, 930, 1691, 1895, 1950, 2483
HpySE526I ACGT 3 cut(s) 12, 57, 1309
Hsp92II CATG 9 cut(s) 438, 482, 1220, 1792, 1938, 2069, 2139, 2312, 2350
HspAI GCGC 4 cut(s) 173, 752, 1089, 2488
KroI GCCGGC 1 cut(s) 94
KroNI GCCGGC 1 cut(s) 96
Ksp22I TGATCA 1 cut(s) 2296
KspAI GTTAAC 1 cut(s) 2016
KspI CCGCGG 1 cut(s) 398
Kzo9I GATC 9 cut(s) 265, 529, 706, 1487, 1513, 1618, 1891, 1965, 2296
LguI GCTCTTC 1 cut(s) 2025
LmnI GCTCC 5 cut(s) 566, 1123, 1333, 1993, 2001
Lsp1109I GCAGC 6 cut(s) 60, 78, 194, 245, 1945, 1967
LweI GCATC 6 cut(s) 434, 763, 1114, 1843, 2162, 2540
MaeI CTAG 4 cut(s) 603, 1850, 2333, 2628
MaeII ACGT 3 cut(s) 12, 57, 1309
MaeIII GTNAC 6 cut(s) 8, 691, 778, 819, 2208, 2384
MalI GATC 9 cut(s) 267, 531, 708, 1489, 1515, 1620, 1893, 1967, 2298
MbiI CCGCTC 1 cut(s) 106
MboI GATC 9 cut(s) 265, 529, 706, 1487, 1513, 1618, 1891, 1965, 2296
MfeI CAATTG 1 cut(s) 1323
MflI RGATCY 3 cut(s) 265, 706, 1487
MhlI GDGCHC 4 cut(s) 212, 462, 563, 1998
MlyI GAGTC 6 cut(s) 52, 590, 941, 1175, 1564, 1683
MmeI TCCRAC 2 cut(s) 1344, 2141
Mph1103I ATGCAT 3 cut(s) 427, 1107, 2314
MroNI GCCGGC 1 cut(s) 94
MroXI GAANNNNTTC 1 cut(s) 2055
MslI CAYNNNNRTG 1 cut(s) 1221
MspA1I CMGCKG 4 cut(s) 73, 397, 1958, 2001
MspCI CTTAAG 3 cut(s) 383, 1528, 1877
MspI CCGG 9 cut(s) 6, 95, 250, 283, 564, 856, 1649, 2103, 2564
MspR9I CCNGG 9 cut(s) 127, 241, 250, 565, 1071, 1940, 2104, 2509, 2564
MunI CAATTG 1 cut(s) 1323
MvaI CCWGG 5 cut(s) 127, 241, 1071, 1940, 2509
MvnI CGCG 3 cut(s) 397, 654, 2586
MwoI GCNNNNNNNGC 5 cut(s) 179, 230, 388, 394, 1955
NaeI GCCGGC 1 cut(s) 96
NciI CCSGG 4 cut(s) 250, 565, 2104, 2564
NdeI CATATG 1 cut(s) 2633
NdeII GATC 9 cut(s) 265, 529, 706, 1487, 1513, 1618, 1891, 1965, 2296
NgoMIV GCCGGC 1 cut(s) 94
NlaIII CATG 9 cut(s) 438, 482, 1220, 1792, 1938, 2069, 2139, 2312, 2350
NlaIV GGNNCC 9 cut(s) 99, 131, 460, 461, 708, 1125, 1372, 1862, 2582
NmuCI GTSAC 3 cut(s) 8, 819, 2384
NsiI ATGCAT 3 cut(s) 427, 1107, 2314
NspV TTCGAA 4 cut(s) 305, 894, 1591, 2318
PagI TCATGA 1 cut(s) 478
PciSI GCTCTTC 1 cut(s) 2025
PcsI WCGNNNNNNNCGW 1 cut(s) 891
PdiI GCCGGC 1 cut(s) 96
PdmI GAANNNNTTC 1 cut(s) 2055
PfeI GAWTC 6 cut(s) 290, 918, 1652, 1661, 2417, 2540
PflFI GACNNNGTC 1 cut(s) 250
PflMI CCANNNNNTGG 2 cut(s) 2201, 2275
PleI GAGTC 6 cut(s) 51, 590, 940, 1174, 1563, 1683
PmaCI CACGTG 1 cut(s) 58
PmlI CACGTG 1 cut(s) 58
PpsI GAGTC 6 cut(s) 51, 590, 940, 1174, 1563, 1683
Ppu21I YACGTR 1 cut(s) 58
Psp124BI GAGCTC 2 cut(s) 563, 1998
Psp6I CCWGG 5 cut(s) 125, 239, 1069, 1938, 2507
PspCI CACGTG 1 cut(s) 58
PspEI GGTNACC 1 cut(s) 819
PspFI CCCAGC 1 cut(s) 1856
PspGI CCWGG 5 cut(s) 125, 239, 1069, 1938, 2507
PspN4I GGNNCC 9 cut(s) 99, 131, 460, 461, 708, 1125, 1372, 1862, 2582
PspOMI GGGCCC 1 cut(s) 458
PspPI GGNCC 3 cut(s) 458, 459, 1785
PstI CTGCAG 1 cut(s) 372
PstNI CAGNNNCTG 1 cut(s) 2490
PsuI RGATCY 3 cut(s) 265, 706, 1487
PsyI GACNNNGTC 1 cut(s) 250
PvuII CAGCTG 1 cut(s) 1958
RsaI GTAC 3 cut(s) 1462, 1704, 1905
RsaNI GTAC 3 cut(s) 1461, 1703, 1904
RseI CAYNNNNRTG 1 cut(s) 1221
SacI GAGCTC 2 cut(s) 563, 1998
SacII CCGCGG 1 cut(s) 398
SalI GTCGAC 2 cut(s) 121, 253
SapI GCTCTTC 1 cut(s) 2025
Sau3AI GATC 9 cut(s) 265, 529, 706, 1487, 1513, 1618, 1891, 1965, 2296
Sau96I GGNCC 3 cut(s) 458, 459, 1785
ScaI AGTACT 1 cut(s) 1905
SchI GAGTC 6 cut(s) 52, 590, 941, 1175, 1564, 1683
ScrFI CCNGG 9 cut(s) 127, 241, 250, 565, 1071, 1940, 2104, 2509, 2564
SduI GDGCHC 4 cut(s) 212, 462, 563, 1998
SfaNI GCATC 6 cut(s) 434, 763, 1114, 1843, 2162, 2540
SfcI CTRYAG 2 cut(s) 368, 2167
Sfr303I CCGCGG 1 cut(s) 398
SfuI TTCGAA 4 cut(s) 305, 894, 1591, 2318
SgrBI CCGCGG 1 cut(s) 398
SinI GGWCC 1 cut(s) 1785
SmiMI CAYNNNNRTG 1 cut(s) 1221
SmlI CTYRAG 5 cut(s) 383, 1298, 1528, 1877, 2468
SmoI CTYRAG 5 cut(s) 383, 1298, 1528, 1877, 2468
SspI AATATT 1 cut(s) 847
SspMI CTAG 4 cut(s) 603, 1850, 2333, 2628
SstI GAGCTC 2 cut(s) 563, 1998
StyD4I CCNGG 9 cut(s) 125, 239, 248, 563, 1069, 1938, 2102, 2507, 2562
StyI CCWWGG 4 cut(s) 463, 936, 1279, 1374
TaiI ACGT 3 cut(s) 15, 60, 1312
TaqII GACCGA 1 cut(s) 829
TatI WGTACW 2 cut(s) 1702, 1903
TauI GCSGC 5 cut(s) 73, 391, 394, 397, 2586
TfiI GAWTC 6 cut(s) 290, 918, 1652, 1661, 2417, 2540
TscAI CASTG 4 cut(s) 417, 1551, 2186, 2454
TseFI GTSAC 3 cut(s) 8, 819, 2384
TseI GCWGC 6 cut(s) 73, 91, 182, 233, 1955, 1958
Tsp45I GTSAC 3 cut(s) 8, 819, 2384
TspGWI ACGGA 2 cut(s) 1320, 2042
TspRI CASTG 4 cut(s) 417, 1551, 2186, 2454
Tth111I GACNNNGTC 1 cut(s) 250
Van91I CCANNNNNTGG 2 cut(s) 2201, 2275
Vha464I CTTAAG 3 cut(s) 383, 1528, 1877
VneI GTGCAC 1 cut(s) 208
VpaK11BI GGWCC 1 cut(s) 1785
XapI RAATTY 9 cut(s) 353, 678, 1156, 1195, 1445, 1549, 1882, 2043, 2499
XbaI TCTAGA 1 cut(s) 1849
XcmI CCANNNNNNNNNTGG 1 cut(s) 2451
XmiI GTMKAC 2 cut(s) 122, 254
XmnI GAANNNNTTC 1 cut(s) 2055
XspI CTAG 4 cut(s) 603, 1850, 2333, 2628
ZrmI AGTACT 1 cut(s) 1905
Zsp2I ATGCAT 3 cut(s) 427, 1107, 2314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.