RLG00000026271

aminoacylase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000575
Physical Location & Seq
Reverse (-)
1796408 .. 1799154
2747 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026271

Sequence Viewer

Length: 471 bp
ATGGAACAGTTCAATTTCGGTTCTGAAAAAAGCTTATCTACAGAAACTGTAGGAACCGATATCAGCTCCTCCACCAAAATCAAGTCACTCTCCGTCTCCGAGATCACACCCCCTCAGCTCTCCAACCTCTCAATTGTCAAATCCGCCTCCACCTCCACCTCCACCTTCGCCTTCGCCTTCGCCTTCTCCTCCGCCTTCGCCAGTGAGCCATCGGAGACTCAATGTCCCACTCTTGCTGACCCAGAAGACCAAGTTCTTGCCTACAAGACGATAGAGCTACTTCCCACAGTTGGATGTGAAGCCGATGCTGCTACACGGTACAACATTCTTGAGAGGAATGTGGGTGGTGTGAACAACAAAGTTTCTGCCTTTGCGTATCAGTCTAGTGGATGTTATGTGTCTGTGGATAAGAGTTTGAATAAGTTGTTGGAAGTAGAGTATTGCTTGATCAATCCTCAAGATTGTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

157

Amino Acids

16.68

Weight (kDa)

4.43

Isoelectric Point (pI)

40.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 144, 192
AfaI GTAC 1 cut(s) 320
AfiI CCNNNNNNNGG 1 cut(s) 290
AgsI TTSAA 2 cut(s) 13, 418
AhdI GACNNNNNGTC 1 cut(s) 222
AjuI GAANNNNNNNTTGG 2 cut(s) 410, 442
AluBI AGCT 4 cut(s) 33, 66, 118, 277
AluI AGCT 4 cut(s) 33, 66, 118, 277
Alw26I GTCTC 2 cut(s) 100, 209
AlwNI CAGNNNCTG 1 cut(s) 47
ApeKI GCWGC 1 cut(s) 308
BbsI GAAGAC 1 cut(s) 252
BbvCI CCTCAGC 1 cut(s) 114
BbvI GCAGC 1 cut(s) 295
BccI CCATC 1 cut(s) 217
BclI TGATCA 1 cut(s) 447
BcoDI GTCTC 2 cut(s) 100, 209
BfaI CTAG 1 cut(s) 384
BfmI CTRYAG 2 cut(s) 39, 48
BisI GCNGC 1 cut(s) 309
BlsI GCNGC 1 cut(s) 310
BmeRI GACNNNNNGTC 1 cut(s) 222
BmiI GGNNCC 1 cut(s) 55
BmsI GCATC 1 cut(s) 295
BpiI GAAGAC 1 cut(s) 252
Bpu10I CCTNAGC 1 cut(s) 114
BpuEI CTTGAG 2 cut(s) 350, 441
Bsc4I CCNNNNNNNGG 1 cut(s) 290
Bse1I ACTGG 1 cut(s) 201
BseGI GGATG 2 cut(s) 299, 395
BseLI CCNNNNNNNGG 1 cut(s) 290
BseMII CTCAG 1 cut(s) 128
BseNI ACTGG 1 cut(s) 201
BseRI GAGGAG 2 cut(s) 58, 178
BseXI GCAGC 1 cut(s) 295
BslFI GGGAC 1 cut(s) 210
BslI CCNNNNNNNGG 1 cut(s) 290
BsmAI GTCTC 2 cut(s) 100, 209
BsmBI CGTCTC 1 cut(s) 100
BsmFI GGGAC 1 cut(s) 210
Bsp143I GATC 2 cut(s) 102, 447
BspACI CCGC 2 cut(s) 144, 192
BspCNI CTCAG 1 cut(s) 127
BspLI GGNNCC 1 cut(s) 55
BsrI ACTGG 1 cut(s) 201
BssMI GATC 2 cut(s) 102, 447
Bst4CI ACNGT 4 cut(s) 9, 49, 289, 318
BstDEI CTNAG 1 cut(s) 114
BstF5I GGATG 2 cut(s) 299, 395
BstKTI GATC 2 cut(s) 105, 450
BstMAI GTCTC 2 cut(s) 100, 209
BstMBI GATC 2 cut(s) 102, 447
BstMWI GCNNNNNNNGC 1 cut(s) 308
BstSFI CTRYAG 2 cut(s) 39, 48
BstV1I GCAGC 1 cut(s) 295
BstV2I GAAGAC 1 cut(s) 252
BtsCI GGATG 2 cut(s) 299, 395
BtsIMutI CAGTG 1 cut(s) 208
CaiI CAGNNNCTG 1 cut(s) 47
Csp6I GTAC 1 cut(s) 319
CviJI RGCY 6 cut(s) 33, 66, 118, 208, 277, 302
CviKI_1 RGCY 6 cut(s) 33, 66, 118, 208, 277, 302
CviQI GTAC 1 cut(s) 319
DdeI CTNAG 1 cut(s) 114
DpnI GATC 2 cut(s) 104, 449
DpnII GATC 2 cut(s) 102, 447
DriI GACNNNNNGTC 1 cut(s) 222
Eam1105I GACNNNNNGTC 1 cut(s) 222
EciI GGCGGA 2 cut(s) 133, 181
Eco32I GATATC 1 cut(s) 61
EcoRV GATATC 1 cut(s) 61
Esp3I CGTCTC 1 cut(s) 100
FaiI YATR 1 cut(s) 396
FaqI GGGAC 1 cut(s) 210
FbaI TGATCA 1 cut(s) 447
Fnu4HI GCNGC 1 cut(s) 309
FokI GGATG 2 cut(s) 306, 402
Fsp4HI GCNGC 1 cut(s) 309
FspBI CTAG 1 cut(s) 384
GluI GCNGC 1 cut(s) 309
HindIII AAGCTT 1 cut(s) 31
HinfI GANTC 1 cut(s) 217
Hpy166II GTNNAC 1 cut(s) 352
Hpy188I TCNGA 3 cut(s) 25, 100, 214
Hpy188III TCNNGA 2 cut(s) 329, 458
Hpy8I GTNNAC 1 cut(s) 352
HpyAV CCTTC 5 cut(s) 175, 181, 187, 193, 205
HpyCH4III ACNGT 4 cut(s) 9, 49, 289, 318
HpyF10VI GCNNNNNNNGC 1 cut(s) 308
HpyF3I CTNAG 1 cut(s) 114
Ksp22I TGATCA 1 cut(s) 447
Kzo9I GATC 2 cut(s) 102, 447
LmnI GCTCC 1 cut(s) 71
LpnPI CCDG 2 cut(s) 214, 255
Lsp1109I GCAGC 1 cut(s) 295
LweI GCATC 1 cut(s) 295
MaeI CTAG 1 cut(s) 384
MaeIII GTNAC 1 cut(s) 84
MalI GATC 2 cut(s) 104, 449
MboI GATC 2 cut(s) 102, 447
MboII GAAGA 1 cut(s) 257
MfeI CAATTG 1 cut(s) 132
MluCI AATT 2 cut(s) 13, 132
MlyI GAGTC 1 cut(s) 211
MmeI TCCRAC 3 cut(s) 147, 271, 408
MnlI CCTC 9 cut(s) 79, 123, 137, 157, 163, 169, 199, 327, 465
MunI CAATTG 1 cut(s) 132
MwoI GCNNNNNNNGC 1 cut(s) 308
NdeII GATC 2 cut(s) 102, 447
NlaIV GGNNCC 1 cut(s) 55
NmuCI GTSAC 1 cut(s) 84
PkrI GCNGC 1 cut(s) 310
PleI GAGTC 1 cut(s) 211
PpsI GAGTC 1 cut(s) 211
PspN4I GGNNCC 1 cut(s) 55
PstNI CAGNNNCTG 1 cut(s) 47
RsaI GTAC 1 cut(s) 320
RsaNI GTAC 1 cut(s) 319
SatI GCNGC 1 cut(s) 309
Sau3AI GATC 2 cut(s) 102, 447
SchI GAGTC 1 cut(s) 211
SetI ASST 8 cut(s) 35, 68, 120, 129, 155, 161, 167, 279
SfaNI GCATC 1 cut(s) 295
SfcI CTRYAG 2 cut(s) 39, 48
SmlI CTYRAG 2 cut(s) 329, 456
SmoI CTYRAG 2 cut(s) 329, 456
Sse9I AATT 2 cut(s) 13, 132
SsiI CCGC 2 cut(s) 144, 192
SspMI CTAG 1 cut(s) 384
TaaI ACNGT 4 cut(s) 9, 49, 289, 318
TasI AATT 2 cut(s) 13, 132
TscAI CASTG 1 cut(s) 208
TseFI GTSAC 1 cut(s) 84
TseI GCWGC 1 cut(s) 308
Tsp45I GTSAC 1 cut(s) 84
TspGWI ACGGA 1 cut(s) 82
TspRI CASTG 1 cut(s) 208
XspI CTAG 1 cut(s) 384
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.