RchiOBHm_Chr1g0332471

Phosphoinositide 3-kinase regulatory subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001323
Physical Location & Seq
Reverse (-)
23772204 .. 23772580
377 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56137

Sequence Viewer

Length: 213 bp
ATGTCTAGGACTCAAGGATTTACGCTATTCTTGCTCTACTTGGAGACAAAGAGACGGCCTCTAACAACAAAGTTGACAGCCAAGGCAGTTCTTGCAGCTGCTGCCACTGATACTGCTGGCTGCCATCGTGACTCAATCCTTTCATTGGCCTCTGTTAAGTTGAATCAAAGACACTTAATATCAAGCAGTAGAGATGGGGCAATCAAGGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000011 GO:0000151 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005768 GO:0005770 GO:0005942 GO:0006355 GO:0006357 GO:0006464 GO:0006468 GO:0006605 GO:0006623 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006886 GO:0006914 GO:0006996 GO:0007033 GO:0007034 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009846 GO:0009856 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010008 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019898 GO:0022414 GO:0023052 GO:0030242 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031461 GO:0031967 GO:0031975 GO:0031982 GO:0032182 GO:0032501 GO:0032502 GO:0032507 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0033036 GO:0033365 GO:0034067 GO:0034243 GO:0034271 GO:0034272 GO:0034613 GO:0035032 GO:0035556 GO:0036211 GO:0042886 GO:0043130 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045053 GO:0045184 GO:0045185 GO:0045324 GO:0045893 GO:0045935 GO:0045944 GO:0046907 GO:0048015 GO:0048017 GO:0048229 GO:0048308 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051235 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051716 GO:0060255 GO:0061695 GO:0061919 GO:0065007 GO:0065008 GO:0070727 GO:0071561 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0080008 GO:0080090 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0120095 GO:0140096 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04140 ko04371 map04136 map04138 map04140 map04371
Pfam Domains
Protein Families
HEAT Pkinase WD40

Protein Analysis

70

Amino Acids

7.61

Weight (kDa)

10.6

Isoelectric Point (pI)

44.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 145
AgsI TTSAA 1 cut(s) 163
AluBI AGCT 1 cut(s) 98
AluI AGCT 1 cut(s) 98
Alw26I GTCTC 2 cut(s) 38, 46
AlwNI CAGNNNCTG 1 cut(s) 101
AoxI GGCC 2 cut(s) 56, 147
ApeKI GCWGC 4 cut(s) 95, 98, 101, 120
BbvI GCAGC 4 cut(s) 85, 88, 107, 107
BccI CCATC 2 cut(s) 132, 188
BceAI ACGGC 1 cut(s) 71
BcoDI GTCTC 2 cut(s) 38, 46
BfaI CTAG 2 cut(s) 6, 211
BisI GCNGC 4 cut(s) 96, 99, 102, 121
BlsI GCNGC 4 cut(s) 97, 100, 103, 122
BplI GAGNNNNNCTC 2 cut(s) 43, 75
BsaJI CCNNGG 1 cut(s) 81
Bsc4I CCNNNNNNNGG 1 cut(s) 145
BseDI CCNNGG 1 cut(s) 81
BseLI CCNNNNNNNGG 1 cut(s) 145
BseXI GCAGC 4 cut(s) 85, 88, 107, 107
BshFI GGCC 2 cut(s) 58, 149
BslI CCNNNNNNNGG 1 cut(s) 145
BsmAI GTCTC 2 cut(s) 38, 46
BsmBI CGTCTC 1 cut(s) 46
BsnI GGCC 2 cut(s) 58, 149
BspANI GGCC 2 cut(s) 58, 149
BssECI CCNNGG 1 cut(s) 81
BssT1I CCWWGG 1 cut(s) 81
BstAPI GCANNNNNTGC 2 cut(s) 92, 101
BstC8I GCNNGC 1 cut(s) 118
BstMAI GTCTC 2 cut(s) 38, 46
BstMWI GCNNNNNNNGC 3 cut(s) 31, 92, 101
BstV1I GCAGC 4 cut(s) 85, 88, 107, 107
BsuRI GGCC 2 cut(s) 58, 149
BtsIMutI CAGTG 1 cut(s) 105
Cac8I GCNNGC 1 cut(s) 118
CaiI CAGNNNCTG 1 cut(s) 101
CviJI RGCY 5 cut(s) 58, 80, 98, 120, 149
CviKI_1 RGCY 5 cut(s) 58, 80, 98, 120, 149
Eco130I CCWWGG 1 cut(s) 81
EcoT14I CCWWGG 1 cut(s) 81
ErhI CCWWGG 1 cut(s) 81
Esp3I CGTCTC 1 cut(s) 46
Fnu4HI GCNGC 4 cut(s) 96, 99, 102, 121
Fsp4HI GCNGC 4 cut(s) 96, 99, 102, 121
FspBI CTAG 2 cut(s) 6, 211
GluI GCNGC 4 cut(s) 96, 99, 102, 121
HaeIII GGCC 2 cut(s) 58, 149
HincII GTYRAC 1 cut(s) 75
HindII GTYRAC 1 cut(s) 75
HinfI GANTC 3 cut(s) 10, 131, 163
Hpy166II GTNNAC 1 cut(s) 75
Hpy188III TCNNGA 1 cut(s) 128
Hpy8I GTNNAC 1 cut(s) 75
HpyCH4V TGCA 1 cut(s) 95
HpyF10VI GCNNNNNNNGC 3 cut(s) 31, 92, 101
LpnPI CCDG 1 cut(s) 102
Lsp1109I GCAGC 4 cut(s) 85, 88, 107, 107
MaeI CTAG 2 cut(s) 6, 211
MaeIII GTNAC 1 cut(s) 128
MlyI GAGTC 2 cut(s) 4, 125
MnlI CCTC 2 cut(s) 69, 160
MseI TTAA 2 cut(s) 156, 176
MspA1I CMGCKG 1 cut(s) 98
MwoI GCNNNNNNNGC 3 cut(s) 31, 92, 101
NmuCI GTSAC 1 cut(s) 128
PfeI GAWTC 1 cut(s) 163
PkrI GCNGC 4 cut(s) 97, 100, 103, 122
PleI GAGTC 2 cut(s) 4, 125
PpsI GAGTC 2 cut(s) 4, 125
PstNI CAGNNNCTG 1 cut(s) 101
PvuII CAGCTG 1 cut(s) 98
SaqAI TTAA 2 cut(s) 156, 176
SatI GCNGC 4 cut(s) 96, 99, 102, 121
SchI GAGTC 2 cut(s) 4, 125
SetI ASST 2 cut(s) 100, 210
SgeI CNNG 9 cut(s) 18, 26, 43, 52, 94, 104, 129, 140, 195
SmlI CTYRAG 1 cut(s) 12
SmoI CTYRAG 1 cut(s) 12
SspMI CTAG 2 cut(s) 6, 211
StyI CCWWGG 1 cut(s) 81
TfiI GAWTC 1 cut(s) 163
Tru1I TTAA 2 cut(s) 156, 176
Tru9I TTAA 2 cut(s) 156, 176
TscAI CASTG 1 cut(s) 112
TseFI GTSAC 1 cut(s) 128
TseI GCWGC 4 cut(s) 95, 98, 101, 120
Tsp45I GTSAC 1 cut(s) 128
TspDTI ATGAA 1 cut(s) 132
TspRI CASTG 1 cut(s) 112
XspI CTAG 2 cut(s) 6, 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.