Rmu_sc0003791.1_g000001

Phosphoinositide 3-kinase regulatory subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003791.1
OG0001323
Physical Location & Seq
Reverse (-)
2 .. 2195
2194 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003791.1_g000001.1.cds

Sequence Viewer

Length: 987 bp
atggggaacaagatcgcgcggacgacccaggcgtcggcgtcggagtattacctgcacgacctgccgtcgtcctacaacctcgtgctgaaagaggttttaggtcgcggacgcttcttcaagtcgattcagtgcaagcacgacgagggtttggtcctcgtgaaggtctatttcaagcgcggcgactccatcgatctccgcgagtacgagcgccgtctcttccatatcaaggagacctttcgcgccctggatcaccctcacctctggcccttccagttttggcaagagacggataaggcagcttatcttgtgagacaatacttcttcaataatctacatgatcgattgagcacgcgcccctttctcagtctcatcgaaaagaaatggttggcttttcagttacttcttgctgtgaaacagtgccatgacaaaggaatatgtcacggtgacattaagtgcgagaatgtcctggtgacttcttggaattggctctatcttgctgactttgcatccttcaaacccacttacattccgtatgatgacccttctgatttctcgtttttctacgacaccggaggaagaaggctttgttatcttgctcccgagagattttatgagcatggaggtgagatgcaagttgcacaagatgcaccattaagaccatctatggatatctttgctgtagggtgtgtgattgctgagctttttcttgagggtcagcccctatttgaactctctcaacttctcgcttatcgtagagggcaatatgatcctagtcaacttcttgaaaagataccagattgtggaatccgcaaaatgatacttcatatgattcagttggaaccagagttgcgactttctgctgatagctacctgcaggagtatacaactattgtgtttccgagttacttctctccatttctgcataattttcattgtttctggaatccgcttcattctgatatgagggttgcactttgccagagtgtt
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000011 GO:0000151 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005768 GO:0005770 GO:0005942 GO:0006355 GO:0006357 GO:0006464 GO:0006468 GO:0006605 GO:0006623 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006886 GO:0006914 GO:0006996 GO:0007033 GO:0007034 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009846 GO:0009856 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010008 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019898 GO:0022414 GO:0023052 GO:0030242 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031461 GO:0031967 GO:0031975 GO:0031982 GO:0032182 GO:0032501 GO:0032502 GO:0032507 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0033036 GO:0033365 GO:0034067 GO:0034243 GO:0034271 GO:0034272 GO:0034613 GO:0035032 GO:0035556 GO:0036211 GO:0042886 GO:0043130 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045053 GO:0045184 GO:0045185 GO:0045324 GO:0045893 GO:0045935 GO:0045944 GO:0046907 GO:0048015 GO:0048017 GO:0048229 GO:0048308 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051235 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051716 GO:0060255 GO:0061695 GO:0061919 GO:0065007 GO:0065008 GO:0070727 GO:0071561 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0080008 GO:0080090 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0120095 GO:0140096 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04140 ko04371 map04136 map04138 map04140 map04371
Pfam Domains
Protein Families
HEAT Pkinase WD40

Protein Analysis

329

Amino Acids

38.71

Weight (kDa)

6.5

Isoelectric Point (pI)

39.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 31
Acc36I ACCTGC 3 cut(s) 60, 69, 879
AccB7I CCANNNNNTGG 1 cut(s) 800
AccI GTMKAC 1 cut(s) 881
AccII CGCG 7 cut(s) 17, 19, 105, 177, 198, 240, 352
AciI CCGC 6 cut(s) 19, 105, 177, 196, 808, 947
AclWI GGATC 2 cut(s) 255, 761
AcyI GRCGYC 2 cut(s) 32, 38
AfaI GTAC 1 cut(s) 203
AfiI CCNNNNNNNGG 4 cut(s) 34, 160, 226, 800
AgsI TTSAA 6 cut(s) 118, 172, 325, 514, 728, 785
AhdI GACNNNNNGTC 1 cut(s) 64
AjnI CCWGG 3 cut(s) 27, 243, 465
AluBI AGCT 3 cut(s) 299, 700, 867
AluI AGCT 3 cut(s) 299, 700, 867
Alw21I GWGCWC 1 cut(s) 350
Alw26I GTCTC 5 cut(s) 218, 224, 278, 304, 371
AlwI GGATC 2 cut(s) 255, 761
Ama87I CYCGRG 1 cut(s) 599
AoxI GGCC 1 cut(s) 263
ApeKI GCWGC 1 cut(s) 296
AspLEI GCGC 5 cut(s) 19, 177, 210, 242, 354
AspS9I GGNCC 2 cut(s) 151, 264
AsuHPI GGTGA 5 cut(s) 242, 248, 455, 481, 635
AvaI CYCGRG 1 cut(s) 599
AvaII GGWCC 1 cut(s) 151
BauI CACGAG 2 cut(s) 80, 155
Bbv12I GWGCWC 1 cut(s) 350
BbvI GCAGC 1 cut(s) 308
BccI CCATC 2 cut(s) 194, 667
BceAI ACGGC 2 cut(s) 49, 195
BciT130I CCWGG 3 cut(s) 29, 245, 467
BcoDI GTCTC 5 cut(s) 218, 224, 278, 304, 371
BfaI CTAG 1 cut(s) 771
BfmI CTRYAG 2 cut(s) 678, 872
BfoI RGCGCY 1 cut(s) 211
BfuAI ACCTGC 3 cut(s) 60, 69, 879
BisI GCNGC 2 cut(s) 178, 297
BlpI GCTNAGC 1 cut(s) 696
BlsI GCNGC 2 cut(s) 179, 298
Bme1390I CCNGG 3 cut(s) 29, 245, 467
Bme18I GGWCC 1 cut(s) 151
BmeRI GACNNNNNGTC 1 cut(s) 64
BmeT110I CYCGRG 1 cut(s) 599
BmgT120I GGNCC 2 cut(s) 151, 264
BmiI GGNNCC 1 cut(s) 840
BmrFI CCNGG 3 cut(s) 29, 245, 467
BmsI GCATC 3 cut(s) 515, 618, 634
Bpu1102I GCTNAGC 1 cut(s) 696
BpuEI CTTGAG 1 cut(s) 728
Bsa29I ATCGAT 2 cut(s) 189, 340
BsaHI GRCGYC 2 cut(s) 32, 38
BsaI GGTCTC 1 cut(s) 224
BsaJI CCNNGG 2 cut(s) 27, 243
BsaWI WCCGGW 1 cut(s) 569
Bsc4I CCNNNNNNNGG 4 cut(s) 34, 160, 226, 800
Bse1I ACTGG 1 cut(s) 271
BseBI CCWGG 3 cut(s) 29, 245, 467
BseCI ATCGAT 2 cut(s) 189, 340
BseDI CCNNGG 2 cut(s) 27, 243
BseGI GGATG 1 cut(s) 506
BseLI CCNNNNNNNGG 4 cut(s) 34, 160, 226, 800
BseMII CTCAG 2 cut(s) 376, 687
BseNI ACTGG 1 cut(s) 271
BseXI GCAGC 1 cut(s) 308
BsgI GTGCAG 1 cut(s) 38
Bsh1236I CGCG 7 cut(s) 17, 19, 105, 177, 198, 240, 352
BshFI GGCC 1 cut(s) 265
BshVI ATCGAT 2 cut(s) 189, 340
BsiHKAI GWGCWC 1 cut(s) 350
BsiHKCI CYCGRG 1 cut(s) 599
BsiSI CCGG 1 cut(s) 570
BslI CCNNNNNNNGG 4 cut(s) 34, 160, 226, 800
BsmAI GTCTC 5 cut(s) 218, 224, 278, 304, 371
BsmBI CGTCTC 2 cut(s) 218, 278
BsnI GGCC 1 cut(s) 265
Bso31I GGTCTC 1 cut(s) 224
BsoBI CYCGRG 1 cut(s) 599
Bsp1286I GDGCHC 1 cut(s) 350
Bsp143I GATC 5 cut(s) 12, 190, 247, 337, 766
Bsp1720I GCTNAGC 1 cut(s) 696
BspACI CCGC 6 cut(s) 19, 105, 177, 196, 808, 947
BspANI GGCC 1 cut(s) 265
BspCNI CTCAG 2 cut(s) 375, 688
BspDI ATCGAT 2 cut(s) 189, 340
BspFNI CGCG 7 cut(s) 17, 19, 105, 177, 198, 240, 352
BspLI GGNNCC 1 cut(s) 840
BspMAI CTGCAG 1 cut(s) 876
BspMI ACCTGC 3 cut(s) 60, 69, 879
BspPI GGATC 2 cut(s) 255, 761
BspTNI GGTCTC 1 cut(s) 224
BsrI ACTGG 1 cut(s) 271
BssECI CCNNGG 2 cut(s) 27, 243
BssMI GATC 5 cut(s) 12, 190, 247, 337, 766
BssNAI GTATAC 1 cut(s) 882
BssNI GRCGYC 2 cut(s) 32, 38
BssSI CACGAG 2 cut(s) 80, 155
Bst1107I GTATAC 1 cut(s) 882
Bst2BI CACGAG 2 cut(s) 80, 155
Bst2UI CCWGG 3 cut(s) 29, 245, 467
Bst4CI ACNGT 2 cut(s) 417, 443
Bst6I CTCTTC 1 cut(s) 221
BstACI GRCGYC 2 cut(s) 32, 38
BstAPI GCANNNNNTGC 2 cut(s) 61, 644
BstC8I GCNNGC 2 cut(s) 134, 350
BstDEI CTNAG 2 cut(s) 362, 696
BstENI CCTNNNNNAGG 1 cut(s) 158
BstF5I GGATG 1 cut(s) 506
BstFNI CGCG 7 cut(s) 17, 19, 105, 177, 198, 240, 352
BstH2I RGCGCY 1 cut(s) 211
BstHHI GCGC 5 cut(s) 19, 177, 210, 242, 354
BstKTI GATC 5 cut(s) 15, 193, 250, 340, 769
BstMAI GTCTC 5 cut(s) 218, 224, 278, 304, 371
BstMBI GATC 5 cut(s) 12, 190, 247, 337, 766
BstMWI GCNNNNNNNGC 3 cut(s) 61, 503, 644
BstNI CCWGG 3 cut(s) 29, 245, 467
BstSCI CCNGG 3 cut(s) 27, 243, 465
BstSFI CTRYAG 2 cut(s) 678, 872
BstUI CGCG 7 cut(s) 17, 19, 105, 177, 198, 240, 352
BstV1I GCAGC 1 cut(s) 308
BstZ17I GTATAC 1 cut(s) 882
Bsu15I ATCGAT 2 cut(s) 189, 340
BsuRI GGCC 1 cut(s) 265
BsuTUI ATCGAT 2 cut(s) 189, 340
BtsCI GGATG 1 cut(s) 506
BtsIMutI CAGTG 2 cut(s) 134, 422
BveI ACCTGC 3 cut(s) 60, 69, 879
Cac8I GCNNGC 2 cut(s) 134, 350
CfoI GCGC 5 cut(s) 19, 177, 210, 242, 354
Cfr13I GGNCC 2 cut(s) 151, 264
ClaI ATCGAT 2 cut(s) 189, 340
CseI GACGC 3 cut(s) 21, 27, 117
Csp6I GTAC 1 cut(s) 202
CviAII CATG 3 cut(s) 335, 422, 617
CviJI RGCY 8 cut(s) 265, 299, 389, 487, 583, 700, 718, 867
CviKI_1 RGCY 8 cut(s) 265, 299, 389, 487, 583, 700, 718, 867
CviQI GTAC 1 cut(s) 202
DdeI CTNAG 2 cut(s) 362, 696
DpnI GATC 5 cut(s) 14, 192, 249, 339, 768
DpnII GATC 5 cut(s) 12, 190, 247, 337, 766
DrdI GACNNNNNNGTC 1 cut(s) 31
DriI GACNNNNNGTC 1 cut(s) 64
DseDI GACNNNNNNGTC 1 cut(s) 31
Eam1104I CTCTTC 1 cut(s) 221
Eam1105I GACNNNNNGTC 1 cut(s) 64
EarI CTCTTC 1 cut(s) 221
Eco31I GGTCTC 1 cut(s) 224
Eco32I GATATC 1 cut(s) 670
Eco47I GGWCC 1 cut(s) 151
Eco88I CYCGRG 1 cut(s) 599
EcoNI CCTNNNNNAGG 1 cut(s) 158
EcoRII CCWGG 3 cut(s) 27, 243, 465
EcoRV GATATC 1 cut(s) 670
Esp3I CGTCTC 2 cut(s) 218, 278
FaeI CATG 3 cut(s) 338, 425, 620
FalI AAGNNNNNCTT 2 cut(s) 218, 250
FatI CATG 3 cut(s) 334, 421, 616
FauNDI CATATG 1 cut(s) 825
FblI GTMKAC 1 cut(s) 881
Fnu4HI GCNGC 2 cut(s) 178, 297
FokI GGATG 1 cut(s) 493
Fsp4HI GCNGC 2 cut(s) 178, 297
FspBI CTAG 1 cut(s) 771
GlaI GCGC 5 cut(s) 18, 176, 209, 241, 353
GluI GCNGC 2 cut(s) 178, 297
HaeII RGCGCY 1 cut(s) 211
HaeIII GGCC 1 cut(s) 265
HapII CCGG 1 cut(s) 570
HgaI GACGC 3 cut(s) 21, 27, 117
HhaI GCGC 5 cut(s) 19, 177, 210, 242, 354
Hin1I GRCGYC 2 cut(s) 32, 38
Hin1II CATG 3 cut(s) 338, 425, 620
Hin6I GCGC 5 cut(s) 17, 175, 208, 240, 352
HinP1I GCGC 5 cut(s) 17, 175, 208, 240, 352
HincII GTYRAC 1 cut(s) 776
HindII GTYRAC 1 cut(s) 776
HinfI GANTC 5 cut(s) 124, 182, 804, 829, 943
HpaII CCGG 1 cut(s) 570
HphI GGTGA 5 cut(s) 242, 248, 455, 481, 635
Hpy166II GTNNAC 2 cut(s) 776, 882
Hpy188I TCNGA 4 cut(s) 43, 547, 900, 958
Hpy188III TCNNGA 5 cut(s) 157, 599, 707, 782, 940
Hpy8I GTNNAC 2 cut(s) 776, 882
Hpy99I CGWCG 4 cut(s) 37, 43, 70, 143
HpyAV CCTTC 5 cut(s) 154, 277, 520, 552, 573
HpyCH4III ACNGT 2 cut(s) 417, 443
HpyCH4V TGCA 9 cut(s) 55, 132, 506, 631, 638, 647, 874, 922, 971
HpyF10VI GCNNNNNNNGC 3 cut(s) 61, 503, 644
HpyF3I CTNAG 2 cut(s) 362, 696
Hsp92I GRCGYC 2 cut(s) 32, 38
Hsp92II CATG 3 cut(s) 338, 425, 620
HspAI GCGC 5 cut(s) 17, 175, 208, 240, 352
Kzo9I GATC 5 cut(s) 12, 190, 247, 337, 766
LmnI GCTCC 1 cut(s) 601
Lsp1109I GCAGC 1 cut(s) 308
LweI GCATC 3 cut(s) 515, 618, 634
MaeI CTAG 1 cut(s) 771
MaeIII GTNAC 5 cut(s) 396, 437, 443, 469, 902
MalI GATC 5 cut(s) 14, 192, 249, 339, 768
MboI GATC 5 cut(s) 12, 190, 247, 337, 766
MboII GAAGA 4 cut(s) 106, 208, 313, 588
MhlI GDGCHC 1 cut(s) 350
MluCI AATT 2 cut(s) 481, 925
MlyI GAGTC 1 cut(s) 176
MmeI TCCRAC 2 cut(s) 21, 816
MseI TTAA 2 cut(s) 450, 653
MslI CAYNNNNRTG 1 cut(s) 621
MspI CCGG 1 cut(s) 570
MspR9I CCNGG 3 cut(s) 29, 245, 467
MvaI CCWGG 3 cut(s) 29, 245, 467
MvnI CGCG 7 cut(s) 17, 19, 105, 177, 198, 240, 352
MwoI GCNNNNNNNGC 3 cut(s) 61, 503, 644
NdeI CATATG 1 cut(s) 825
NdeII GATC 5 cut(s) 12, 190, 247, 337, 766
NlaIII CATG 3 cut(s) 338, 425, 620
NlaIV GGNNCC 1 cut(s) 840
NmuCI GTSAC 3 cut(s) 437, 443, 469
PcsI WCGNNNNNNNCGW 2 cut(s) 29, 195
PfeI GAWTC 4 cut(s) 124, 804, 829, 943
PflMI CCANNNNNTGG 1 cut(s) 800
PkrI GCNGC 2 cut(s) 179, 298
PleI GAGTC 1 cut(s) 176
PpsI GAGTC 1 cut(s) 176
Psp6I CCWGG 3 cut(s) 27, 243, 465
PspGI CCWGG 3 cut(s) 27, 243, 465
PspN4I GGNNCC 1 cut(s) 840
PspPI GGNCC 2 cut(s) 151, 264
PstI CTGCAG 1 cut(s) 876
RsaI GTAC 1 cut(s) 203
RsaNI GTAC 1 cut(s) 202
RseI CAYNNNNRTG 1 cut(s) 621
SaqAI TTAA 2 cut(s) 450, 653
SatI GCNGC 2 cut(s) 178, 297
Sau3AI GATC 5 cut(s) 12, 190, 247, 337, 766
Sau96I GGNCC 2 cut(s) 151, 264
SbfI CCTGCAGG 1 cut(s) 876
SchI GAGTC 1 cut(s) 176
ScrFI CCNGG 3 cut(s) 29, 245, 467
SdaI CCTGCAGG 1 cut(s) 876
SduI GDGCHC 1 cut(s) 350
SfaNI GCATC 3 cut(s) 515, 618, 634
SfcI CTRYAG 2 cut(s) 678, 872
SinI GGWCC 1 cut(s) 151
SmiMI CAYNNNNRTG 1 cut(s) 621
SmlI CTYRAG 1 cut(s) 707
SmoI CTYRAG 1 cut(s) 707
Sse8387I CCTGCAGG 1 cut(s) 876
Sse9I AATT 2 cut(s) 481, 925
SsiI CCGC 6 cut(s) 19, 105, 177, 196, 808, 947
SspMI CTAG 1 cut(s) 771
StyD4I CCNGG 3 cut(s) 27, 243, 465
TaaI ACNGT 2 cut(s) 417, 443
TaqI TCGA 4 cut(s) 122, 189, 340, 372
TasI AATT 2 cut(s) 481, 925
TauI GCSGC 1 cut(s) 180
TfiI GAWTC 4 cut(s) 124, 804, 829, 943
Tru1I TTAA 2 cut(s) 450, 653
Tru9I TTAA 2 cut(s) 450, 653
TscAI CASTG 2 cut(s) 134, 422
TseFI GTSAC 3 cut(s) 437, 443, 469
TseI GCWGC 1 cut(s) 296
Tsp45I GTSAC 3 cut(s) 437, 443, 469
TspDTI ATGAA 3 cut(s) 812, 920, 941
TspGWI ACGGA 2 cut(s) 302, 519
TspRI CASTG 2 cut(s) 134, 422
Van91I CCANNNNNTGG 1 cut(s) 800
VpaK11BI GGWCC 1 cut(s) 151
XagI CCTNNNNNAGG 1 cut(s) 158
XmiI GTMKAC 1 cut(s) 881
XspI CTAG 1 cut(s) 771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.