Rmu_co8007494.1_g000001

Phosphoinositide 3-kinase regulatory subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8007494.1
OG0001323
Physical Location & Seq
Reverse (-)
1 .. 459
459 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8007494.1_g000001.1.cds

Sequence Viewer

Length: 361 bp
atgtctgaggtgccttgggccttggcaagatcatcaactaaaaattccaaagcggatatgagacggaatgtcaatcctcattacagagttgatgaactgaatgaaccacctcctcgcattcctggcatccgttcattgcttcccttacctgggggtgatttgttaactgggggaaccgacttgaagatacgtcgatgggatcattacagccctgatcgaagttactgtatttgtgggccaaacttgaagggtgttggaaatgatgatttttatggaatgcgctctagctttggcgtgcaagttgtgcaggtatcatttctagaaactttaaagttaggtgggttagtaccttccttggagg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000011 GO:0000151 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005768 GO:0005770 GO:0005942 GO:0006355 GO:0006357 GO:0006464 GO:0006468 GO:0006605 GO:0006623 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006886 GO:0006914 GO:0006996 GO:0007033 GO:0007034 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009846 GO:0009856 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010008 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019898 GO:0022414 GO:0023052 GO:0030242 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031461 GO:0031967 GO:0031975 GO:0031982 GO:0032182 GO:0032501 GO:0032502 GO:0032507 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0033036 GO:0033365 GO:0034067 GO:0034243 GO:0034271 GO:0034272 GO:0034613 GO:0035032 GO:0035556 GO:0036211 GO:0042886 GO:0043130 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045053 GO:0045184 GO:0045185 GO:0045324 GO:0045893 GO:0045935 GO:0045944 GO:0046907 GO:0048015 GO:0048017 GO:0048229 GO:0048308 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051235 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051716 GO:0060255 GO:0061695 GO:0061919 GO:0065007 GO:0065008 GO:0070727 GO:0071561 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0080008 GO:0080090 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0120095 GO:0140096 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04140 ko04371 map04136 map04138 map04140 map04371
Pfam Domains
Protein Families
HEAT Pkinase WD40

Protein Analysis

120

Amino Acids

13.33

Weight (kDa)

8.66

Isoelectric Point (pI)

59.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 298
AccB1I GGYRCC 1 cut(s) 10
AciI CCGC 1 cut(s) 53
AclWI GGATC 1 cut(s) 207
AcsI RAATTY 1 cut(s) 43
AfaI GTAC 1 cut(s) 348
AfiI CCNNNNNNNGG 2 cut(s) 149, 150
AgsI TTSAA 2 cut(s) 184, 247
AhdI GACNNNNNGTC 1 cut(s) 68
AjnI CCWGG 2 cut(s) 121, 148
AluBI AGCT 1 cut(s) 288
AluI AGCT 1 cut(s) 288
Alw26I GTCTC 1 cut(s) 55
AlwI GGATC 1 cut(s) 207
AoxI GGCC 2 cut(s) 18, 236
ApoI RAATTY 1 cut(s) 43
AspLEI GCGC 1 cut(s) 282
AspS9I GGNCC 2 cut(s) 18, 236
AsuHPI GGTGA 1 cut(s) 167
BanI GGYRCC 1 cut(s) 10
BccI CCATC 1 cut(s) 189
BciT130I CCWGG 2 cut(s) 123, 150
BcoDI GTCTC 1 cut(s) 55
BfaI CTAG 2 cut(s) 285, 320
BfuAI ACCTGC 1 cut(s) 298
Bme1390I CCNGG 2 cut(s) 123, 150
BmeRI GACNNNNNGTC 1 cut(s) 68
BmgT120I GGNCC 2 cut(s) 18, 236
BmiI GGNNCC 2 cut(s) 12, 175
BmrFI CCNGG 2 cut(s) 123, 150
BmrI ACTGGG 1 cut(s) 177
BmsI GCATC 1 cut(s) 135
BmuI ACTGGG 1 cut(s) 177
BsaJI CCNNGG 4 cut(s) 14, 21, 149, 354
Bsc4I CCNNNNNNNGG 2 cut(s) 149, 150
Bse1I ACTGG 1 cut(s) 172
Bse3DI GCAATG 1 cut(s) 134
BseBI CCWGG 2 cut(s) 123, 150
BseDI CCNNGG 4 cut(s) 14, 21, 149, 354
BseGI GGATG 1 cut(s) 126
BseLI CCNNNNNNNGG 2 cut(s) 149, 150
BseMI GCAATG 1 cut(s) 134
BseNI ACTGG 1 cut(s) 172
BseRI GAGGAG 1 cut(s) 102
BsgI GTGCAG 1 cut(s) 326
BshFI GGCC 2 cut(s) 20, 238
BshNI GGYRCC 1 cut(s) 10
BslI CCNNNNNNNGG 2 cut(s) 149, 150
BsmAI GTCTC 1 cut(s) 55
BsmBI CGTCTC 1 cut(s) 55
BsmI GAATGC 2 cut(s) 117, 282
BsnI GGCC 2 cut(s) 20, 238
Bsp143I GATC 3 cut(s) 29, 199, 214
BspACI CCGC 1 cut(s) 53
BspANI GGCC 2 cut(s) 20, 238
BspLI GGNNCC 2 cut(s) 12, 175
BspMI ACCTGC 1 cut(s) 298
BspPI GGATC 1 cut(s) 207
BspT107I GGYRCC 1 cut(s) 10
BsrDI GCAATG 1 cut(s) 134
BsrI ACTGG 1 cut(s) 172
BssECI CCNNGG 4 cut(s) 14, 21, 149, 354
BssMI GATC 3 cut(s) 29, 199, 214
BssT1I CCWWGG 3 cut(s) 14, 21, 354
Bst2UI CCWGG 2 cut(s) 123, 150
Bst4CI ACNGT 1 cut(s) 227
BstAPI GCANNNNNTGC 1 cut(s) 304
BstC8I GCNNGC 1 cut(s) 296
BstDEI CTNAG 1 cut(s) 6
BstF5I GGATG 1 cut(s) 126
BstHHI GCGC 1 cut(s) 282
BstKTI GATC 3 cut(s) 32, 202, 217
BstMAI GTCTC 1 cut(s) 55
BstMBI GATC 3 cut(s) 29, 199, 214
BstMWI GCNNNNNNNGC 2 cut(s) 123, 304
BstNI CCWGG 2 cut(s) 123, 150
BstSCI CCNGG 2 cut(s) 121, 148
BsuRI GGCC 2 cut(s) 20, 238
BtsCI GGATG 1 cut(s) 126
BveI ACCTGC 1 cut(s) 298
Cac8I GCNNGC 1 cut(s) 296
CfoI GCGC 1 cut(s) 282
Cfr13I GGNCC 2 cut(s) 18, 236
Csp6I GTAC 1 cut(s) 347
CviJI RGCY 4 cut(s) 20, 210, 238, 288
CviKI_1 RGCY 4 cut(s) 20, 210, 238, 288
CviQI GTAC 1 cut(s) 347
DdeI CTNAG 1 cut(s) 6
DpnI GATC 3 cut(s) 31, 201, 216
DpnII GATC 3 cut(s) 29, 199, 214
DraI TTTAAA 1 cut(s) 330
DriI GACNNNNNGTC 1 cut(s) 68
Eam1105I GACNNNNNGTC 1 cut(s) 68
Eco130I CCWWGG 3 cut(s) 14, 21, 354
EcoRII CCWGG 2 cut(s) 121, 148
EcoT14I CCWWGG 3 cut(s) 14, 21, 354
ErhI CCWWGG 3 cut(s) 14, 21, 354
Esp3I CGTCTC 1 cut(s) 55
FaiI YATR 2 cut(s) 59, 273
FokI GGATG 1 cut(s) 113
FspBI CTAG 2 cut(s) 285, 320
GlaI GCGC 1 cut(s) 281
HaeIII GGCC 2 cut(s) 20, 238
HhaI GCGC 1 cut(s) 282
Hin6I GCGC 1 cut(s) 280
HinP1I GCGC 1 cut(s) 280
HincII GTYRAC 1 cut(s) 165
HindII GTYRAC 1 cut(s) 165
HpaI GTTAAC 1 cut(s) 165
HphI GGTGA 1 cut(s) 167
Hpy166II GTNNAC 1 cut(s) 165
Hpy188I TCNGA 1 cut(s) 7
Hpy188III TCNNGA 1 cut(s) 320
Hpy8I GTNNAC 1 cut(s) 165
Hpy99I CGWCG 1 cut(s) 195
HpyAV CCTTC 2 cut(s) 241, 360
HpyCH4III ACNGT 1 cut(s) 227
HpyCH4IV ACGT 1 cut(s) 190
HpyCH4V TGCA 2 cut(s) 298, 307
HpyF10VI GCNNNNNNNGC 2 cut(s) 123, 304
HpyF3I CTNAG 1 cut(s) 6
HpySE526I ACGT 1 cut(s) 190
HspAI GCGC 1 cut(s) 280
KspAI GTTAAC 1 cut(s) 165
Kzo9I GATC 3 cut(s) 29, 199, 214
LpnPI CCDG 7 cut(s) 108, 135, 135, 153, 162, 225, 293
LweI GCATC 1 cut(s) 135
MaeI CTAG 2 cut(s) 285, 320
MaeII ACGT 1 cut(s) 190
MaeIII GTNAC 1 cut(s) 221
MalI GATC 3 cut(s) 31, 201, 216
MboI GATC 3 cut(s) 29, 199, 214
MboII GAAGA 1 cut(s) 196
MluCI AATT 1 cut(s) 43
MmeI TCCRAC 1 cut(s) 235
MnlI CCTC 4 cut(s) 87, 120, 123, 352
MseI TTAA 2 cut(s) 164, 329
MspR9I CCNGG 2 cut(s) 123, 150
Mva1269I GAATGC 2 cut(s) 117, 282
MvaI CCWGG 2 cut(s) 123, 150
MwoI GCNNNNNNNGC 2 cut(s) 123, 304
NdeII GATC 3 cut(s) 29, 199, 214
NlaIV GGNNCC 2 cut(s) 12, 175
PctI GAATGC 2 cut(s) 117, 282
Psp6I CCWGG 2 cut(s) 121, 148
PspGI CCWGG 2 cut(s) 121, 148
PspN4I GGNNCC 2 cut(s) 12, 175
PspPI GGNCC 2 cut(s) 18, 236
RsaI GTAC 1 cut(s) 348
RsaNI GTAC 1 cut(s) 347
SaqAI TTAA 2 cut(s) 164, 329
Sau3AI GATC 3 cut(s) 29, 199, 214
Sau96I GGNCC 2 cut(s) 18, 236
ScrFI CCNGG 2 cut(s) 123, 150
SetI ASST 8 cut(s) 12, 112, 151, 193, 290, 312, 340, 352
SfaNI GCATC 1 cut(s) 135
Sse9I AATT 1 cut(s) 43
SsiI CCGC 1 cut(s) 53
SspMI CTAG 2 cut(s) 285, 320
StyD4I CCNGG 2 cut(s) 121, 148
StyI CCWWGG 3 cut(s) 14, 21, 354
TaaI ACNGT 1 cut(s) 227
TaiI ACGT 1 cut(s) 193
TaqI TCGA 2 cut(s) 193, 217
TasI AATT 1 cut(s) 43
Tru1I TTAA 2 cut(s) 164, 329
Tru9I TTAA 2 cut(s) 164, 329
TspDTI ATGAA 3 cut(s) 108, 117, 123
TspGWI ACGGA 2 cut(s) 79, 119
XapI RAATTY 1 cut(s) 43
XbaI TCTAGA 1 cut(s) 319
XspI CTAG 2 cut(s) 285, 320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.