Rh1CG119400

Phosphoinositide 3-kinase regulatory subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0001323
Physical Location & Seq
Reverse (-)
25866041 .. 25867345
1305 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG119400.1

Sequence Viewer

Length: 423 bp
ATGTCTGAGATGCCTTGGGCCTTGGCGAGATCATCAACTAAAAATTCCAAAGTGGATATGAGACGGAATGTCAATCCTCATTACAGAGTTGATGAACTGAATGAACCACCTCCTCGCATTCCTGGCATCCGTTCATTGCTTCCCTTAACTGGGGGTGATTTGTTAACTGGGGAAACCGACTTGAAGATACGTCGATGGGATCATTACAGGGTGCTAGAAATGATGATTTTCTATGAAACGCGGTCTAGCTTTGGCGTGCAAGTTGTGCAGAAAACAACAAAGTTGACAGCCAAGGCAGTTCTTGCAGCTGCTGCCATTGATACTGCTGGCTGCCATCGTGTTTCAATCCTTTCATTGGCCTCTGTTAAGTTGAATCAAAGACACTTAATATCAAGCAGTAGAGATGGGGCAATCAAGGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000011 GO:0000151 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005768 GO:0005770 GO:0005942 GO:0006355 GO:0006357 GO:0006464 GO:0006468 GO:0006605 GO:0006623 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006886 GO:0006914 GO:0006996 GO:0007033 GO:0007034 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009846 GO:0009856 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010008 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019898 GO:0022414 GO:0023052 GO:0030242 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031461 GO:0031967 GO:0031975 GO:0031982 GO:0032182 GO:0032501 GO:0032502 GO:0032507 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0033036 GO:0033365 GO:0034067 GO:0034243 GO:0034271 GO:0034272 GO:0034613 GO:0035032 GO:0035556 GO:0036211 GO:0042886 GO:0043130 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045053 GO:0045184 GO:0045185 GO:0045324 GO:0045893 GO:0045935 GO:0045944 GO:0046907 GO:0048015 GO:0048017 GO:0048229 GO:0048308 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051235 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051716 GO:0060255 GO:0061695 GO:0061919 GO:0065007 GO:0065008 GO:0070727 GO:0071561 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0080008 GO:0080090 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0120095 GO:0140096 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04140 ko04371 map04136 map04138 map04140 map04371
Pfam Domains
Protein Families
HEAT Pkinase WD40

Protein Analysis

140

Amino Acids

15.67

Weight (kDa)

10.07

Isoelectric Point (pI)

49.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 241
AciI CCGC 1 cut(s) 241
AclWI GGATC 1 cut(s) 207
AcsI RAATTY 1 cut(s) 43
AfiI CCNNNNNNNGG 3 cut(s) 149, 150, 355
AgsI TTSAA 3 cut(s) 184, 345, 373
AhdI GACNNNNNGTC 1 cut(s) 68
AjnI CCWGG 1 cut(s) 121
AluBI AGCT 2 cut(s) 249, 308
AluI AGCT 2 cut(s) 249, 308
Alw26I GTCTC 1 cut(s) 55
AlwI GGATC 1 cut(s) 207
AlwNI CAGNNNCTG 1 cut(s) 311
AoxI GGCC 2 cut(s) 18, 357
ApeKI GCWGC 4 cut(s) 305, 308, 311, 330
ApoI RAATTY 1 cut(s) 43
AspS9I GGNCC 1 cut(s) 18
AsuHPI GGTGA 1 cut(s) 167
BbvI GCAGC 4 cut(s) 295, 298, 317, 317
BccI CCATC 3 cut(s) 189, 342, 398
BciT130I CCWGG 1 cut(s) 123
BcoDI GTCTC 1 cut(s) 55
BfaI CTAG 3 cut(s) 215, 246, 421
BisI GCNGC 4 cut(s) 306, 309, 312, 331
BlsI GCNGC 4 cut(s) 307, 310, 313, 332
Bme1390I CCNGG 1 cut(s) 123
BmeRI GACNNNNNGTC 1 cut(s) 68
BmgT120I GGNCC 1 cut(s) 18
BmrFI CCNGG 1 cut(s) 123
BmrI ACTGGG 2 cut(s) 159, 177
BmsI GCATC 1 cut(s) 135
BmuI ACTGGG 2 cut(s) 159, 177
BsaJI CCNNGG 3 cut(s) 14, 21, 291
Bsc4I CCNNNNNNNGG 3 cut(s) 149, 150, 355
Bse1I ACTGG 2 cut(s) 154, 172
Bse3DI GCAATG 1 cut(s) 134
BseBI CCWGG 1 cut(s) 123
BseDI CCNNGG 3 cut(s) 14, 21, 291
BseGI GGATG 1 cut(s) 126
BseLI CCNNNNNNNGG 3 cut(s) 149, 150, 355
BseMI GCAATG 1 cut(s) 134
BseNI ACTGG 2 cut(s) 154, 172
BseRI GAGGAG 1 cut(s) 102
BseXI GCAGC 4 cut(s) 295, 298, 317, 317
BsgI GTGCAG 1 cut(s) 287
Bsh1236I CGCG 1 cut(s) 241
BshFI GGCC 2 cut(s) 20, 359
BslI CCNNNNNNNGG 3 cut(s) 149, 150, 355
BsmAI GTCTC 1 cut(s) 55
BsmBI CGTCTC 1 cut(s) 55
BsmI GAATGC 1 cut(s) 117
BsnI GGCC 2 cut(s) 20, 359
Bsp143I GATC 2 cut(s) 29, 199
BspACI CCGC 1 cut(s) 241
BspANI GGCC 2 cut(s) 20, 359
BspFNI CGCG 1 cut(s) 241
BspPI GGATC 1 cut(s) 207
BsrDI GCAATG 1 cut(s) 134
BsrI ACTGG 2 cut(s) 154, 172
BssECI CCNNGG 3 cut(s) 14, 21, 291
BssMI GATC 2 cut(s) 29, 199
BssT1I CCWWGG 3 cut(s) 14, 21, 291
Bst2UI CCWGG 1 cut(s) 123
BstAPI GCANNNNNTGC 3 cut(s) 265, 302, 311
BstC8I GCNNGC 2 cut(s) 257, 328
BstDEI CTNAG 1 cut(s) 6
BstF5I GGATG 1 cut(s) 126
BstFNI CGCG 1 cut(s) 241
BstKTI GATC 2 cut(s) 32, 202
BstMAI GTCTC 1 cut(s) 55
BstMBI GATC 2 cut(s) 29, 199
BstMWI GCNNNNNNNGC 4 cut(s) 123, 265, 302, 311
BstNI CCWGG 1 cut(s) 123
BstSCI CCNGG 1 cut(s) 121
BstUI CGCG 1 cut(s) 241
BstV1I GCAGC 4 cut(s) 295, 298, 317, 317
BsuRI GGCC 2 cut(s) 20, 359
BtsCI GGATG 1 cut(s) 126
Cac8I GCNNGC 2 cut(s) 257, 328
CaiI CAGNNNCTG 1 cut(s) 311
Cfr13I GGNCC 1 cut(s) 18
CviJI RGCY 6 cut(s) 20, 249, 290, 308, 330, 359
CviKI_1 RGCY 6 cut(s) 20, 249, 290, 308, 330, 359
DdeI CTNAG 1 cut(s) 6
DpnI GATC 2 cut(s) 31, 201
DpnII GATC 2 cut(s) 29, 199
DriI GACNNNNNGTC 1 cut(s) 68
Eam1105I GACNNNNNGTC 1 cut(s) 68
Eco130I CCWWGG 3 cut(s) 14, 21, 291
EcoRII CCWGG 1 cut(s) 121
EcoT14I CCWWGG 3 cut(s) 14, 21, 291
ErhI CCWWGG 3 cut(s) 14, 21, 291
Esp3I CGTCTC 1 cut(s) 55
FaiI YATR 2 cut(s) 59, 234
Fnu4HI GCNGC 4 cut(s) 306, 309, 312, 331
FokI GGATG 1 cut(s) 113
Fsp4HI GCNGC 4 cut(s) 306, 309, 312, 331
FspBI CTAG 3 cut(s) 215, 246, 421
GluI GCNGC 4 cut(s) 306, 309, 312, 331
HaeIII GGCC 2 cut(s) 20, 359
HincII GTYRAC 2 cut(s) 165, 285
HindII GTYRAC 2 cut(s) 165, 285
HinfI GANTC 1 cut(s) 373
HpaI GTTAAC 1 cut(s) 165
HphI GGTGA 1 cut(s) 167
Hpy166II GTNNAC 2 cut(s) 165, 285
Hpy188I TCNGA 1 cut(s) 7
Hpy8I GTNNAC 2 cut(s) 165, 285
Hpy99I CGWCG 1 cut(s) 195
HpyCH4IV ACGT 1 cut(s) 190
HpyCH4V TGCA 3 cut(s) 259, 268, 305
HpyF10VI GCNNNNNNNGC 4 cut(s) 123, 265, 302, 311
HpyF3I CTNAG 1 cut(s) 6
HpySE526I ACGT 1 cut(s) 190
KspAI GTTAAC 1 cut(s) 165
Kzo9I GATC 2 cut(s) 29, 199
LpnPI CCDG 6 cut(s) 108, 135, 135, 153, 193, 312
Lsp1109I GCAGC 4 cut(s) 295, 298, 317, 317
LweI GCATC 1 cut(s) 135
MaeI CTAG 3 cut(s) 215, 246, 421
MaeII ACGT 1 cut(s) 190
MalI GATC 2 cut(s) 31, 201
MboI GATC 2 cut(s) 29, 199
MboII GAAGA 1 cut(s) 196
MluCI AATT 1 cut(s) 43
MnlI CCTC 4 cut(s) 87, 120, 123, 370
MseI TTAA 4 cut(s) 146, 164, 366, 386
MspA1I CMGCKG 1 cut(s) 308
MspR9I CCNGG 1 cut(s) 123
Mva1269I GAATGC 1 cut(s) 117
MvaI CCWGG 1 cut(s) 123
MvnI CGCG 1 cut(s) 241
MwoI GCNNNNNNNGC 4 cut(s) 123, 265, 302, 311
NdeII GATC 2 cut(s) 29, 199
PctI GAATGC 1 cut(s) 117
PfeI GAWTC 1 cut(s) 373
PkrI GCNGC 4 cut(s) 307, 310, 313, 332
Psp6I CCWGG 1 cut(s) 121
PspGI CCWGG 1 cut(s) 121
PspPI GGNCC 1 cut(s) 18
PstNI CAGNNNCTG 1 cut(s) 311
PvuII CAGCTG 1 cut(s) 308
SaqAI TTAA 4 cut(s) 146, 164, 366, 386
SatI GCNGC 4 cut(s) 306, 309, 312, 331
Sau3AI GATC 2 cut(s) 29, 199
Sau96I GGNCC 1 cut(s) 18
ScrFI CCNGG 1 cut(s) 123
SetI ASST 5 cut(s) 112, 193, 251, 310, 420
SfaNI GCATC 1 cut(s) 135
Sse9I AATT 1 cut(s) 43
SsiI CCGC 1 cut(s) 241
SspMI CTAG 3 cut(s) 215, 246, 421
StyD4I CCNGG 1 cut(s) 121
StyI CCWWGG 3 cut(s) 14, 21, 291
TaiI ACGT 1 cut(s) 193
TaqI TCGA 1 cut(s) 193
TasI AATT 1 cut(s) 43
TfiI GAWTC 1 cut(s) 373
Tru1I TTAA 4 cut(s) 146, 164, 366, 386
Tru9I TTAA 4 cut(s) 146, 164, 366, 386
TseI GCWGC 4 cut(s) 305, 308, 311, 330
TspDTI ATGAA 5 cut(s) 108, 117, 123, 249, 342
TspGWI ACGGA 2 cut(s) 79, 119
XapI RAATTY 1 cut(s) 43
XspI CTAG 3 cut(s) 215, 246, 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.