Rmu_co8438029.1_g000001

Phosphoinositide 3-kinase regulatory subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8438029.1
OG0001323
Physical Location & Seq
Forward (+)
70 .. 1439
1370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8438029.1_g000001.1.cds

Sequence Viewer

Length: 687 bp
atggggaacaagatcgcgcggacgacccaggcgtcggcgtcggagtattacctgcacgacctgccgtcgtcctacaacctcgtgctgaaagaggttttaggtcgcggacggttcttcaagtcgattcagtgcaagcacgacgagggtttggtcctcgtgaaggtctatttcaagcgcggcgactccatcgatctccgcgagtacgagcgccgtctcttccatatcaaggagacctttcgcgccctggatcaccctcacctctggcccttccagttttggcaagagacggataaggcagcttatcttgtgagacaatacttcttcaataatctacatgatcgattgagcacgcgcccctttctcagtctcatcgaaaagaaatggttggcttttcagttacttcttgctgtgaaacagtgccatgacaaaggaatatgtcacggtgacattaagtgcgagaatgtcctggtgacttcttggaattggctctatcttgctgactttgcatccttcaaacccacttacattccgtatgatgacccttctgatttctcgtttttctacgacaccggaggaagaaggctttgttatcttgctcccgagagattttatgagcatggaggtgagatgcaagttgcacaagatgcaccattaagaccatctatggatatctttgctgtagggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000011 GO:0000151 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005768 GO:0005770 GO:0005942 GO:0006355 GO:0006357 GO:0006464 GO:0006468 GO:0006605 GO:0006623 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006886 GO:0006914 GO:0006996 GO:0007033 GO:0007034 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009846 GO:0009856 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010008 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019898 GO:0022414 GO:0023052 GO:0030242 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031461 GO:0031967 GO:0031975 GO:0031982 GO:0032182 GO:0032501 GO:0032502 GO:0032507 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0033036 GO:0033365 GO:0034067 GO:0034243 GO:0034271 GO:0034272 GO:0034613 GO:0035032 GO:0035556 GO:0036211 GO:0042886 GO:0043130 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045053 GO:0045184 GO:0045185 GO:0045324 GO:0045893 GO:0045935 GO:0045944 GO:0046907 GO:0048015 GO:0048017 GO:0048229 GO:0048308 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051235 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051716 GO:0060255 GO:0061695 GO:0061919 GO:0065007 GO:0065008 GO:0070727 GO:0071561 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0080008 GO:0080090 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0120095 GO:0140096 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04140 ko04371 map04136 map04138 map04140 map04371
Pfam Domains
Protein Families
HEAT Pkinase WD40

Protein Analysis

228

Amino Acids

26.87

Weight (kDa)

7.68

Isoelectric Point (pI)

35.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 31
Acc36I ACCTGC 2 cut(s) 60, 69
AccII CGCG 7 cut(s) 17, 19, 105, 177, 198, 240, 352
AciI CCGC 4 cut(s) 19, 105, 177, 196
AclWI GGATC 1 cut(s) 255
AcyI GRCGYC 2 cut(s) 32, 38
AfaI GTAC 1 cut(s) 203
AfiI CCNNNNNNNGG 3 cut(s) 34, 160, 226
AgsI TTSAA 4 cut(s) 118, 172, 325, 514
AhdI GACNNNNNGTC 1 cut(s) 64
AjnI CCWGG 3 cut(s) 27, 243, 465
AluBI AGCT 1 cut(s) 299
AluI AGCT 1 cut(s) 299
Alw21I GWGCWC 1 cut(s) 350
Alw26I GTCTC 5 cut(s) 218, 224, 278, 304, 371
AlwI GGATC 1 cut(s) 255
Ama87I CYCGRG 1 cut(s) 599
AoxI GGCC 1 cut(s) 263
ApeKI GCWGC 1 cut(s) 296
AspLEI GCGC 5 cut(s) 19, 177, 210, 242, 354
AspS9I GGNCC 2 cut(s) 151, 264
AsuHPI GGTGA 5 cut(s) 242, 248, 455, 481, 635
AvaI CYCGRG 1 cut(s) 599
AvaII GGWCC 1 cut(s) 151
BauI CACGAG 2 cut(s) 80, 155
Bbv12I GWGCWC 1 cut(s) 350
BbvI GCAGC 1 cut(s) 308
BccI CCATC 2 cut(s) 194, 667
BceAI ACGGC 2 cut(s) 49, 195
BciT130I CCWGG 3 cut(s) 29, 245, 467
BcoDI GTCTC 5 cut(s) 218, 224, 278, 304, 371
BfmI CTRYAG 1 cut(s) 678
BfoI RGCGCY 1 cut(s) 211
BfuAI ACCTGC 2 cut(s) 60, 69
BisI GCNGC 2 cut(s) 178, 297
BlsI GCNGC 2 cut(s) 179, 298
Bme1390I CCNGG 3 cut(s) 29, 245, 467
Bme18I GGWCC 1 cut(s) 151
BmeRI GACNNNNNGTC 1 cut(s) 64
BmeT110I CYCGRG 1 cut(s) 599
BmgT120I GGNCC 2 cut(s) 151, 264
BmrFI CCNGG 3 cut(s) 29, 245, 467
BmsI GCATC 3 cut(s) 515, 618, 634
Bsa29I ATCGAT 2 cut(s) 189, 340
BsaHI GRCGYC 2 cut(s) 32, 38
BsaI GGTCTC 1 cut(s) 224
BsaJI CCNNGG 2 cut(s) 27, 243
BsaWI WCCGGW 1 cut(s) 569
Bsc4I CCNNNNNNNGG 3 cut(s) 34, 160, 226
Bse1I ACTGG 1 cut(s) 271
BseBI CCWGG 3 cut(s) 29, 245, 467
BseCI ATCGAT 2 cut(s) 189, 340
BseDI CCNNGG 2 cut(s) 27, 243
BseGI GGATG 1 cut(s) 506
BseLI CCNNNNNNNGG 3 cut(s) 34, 160, 226
BseMII CTCAG 1 cut(s) 376
BseNI ACTGG 1 cut(s) 271
BseXI GCAGC 1 cut(s) 308
BsgI GTGCAG 1 cut(s) 38
Bsh1236I CGCG 7 cut(s) 17, 19, 105, 177, 198, 240, 352
BshFI GGCC 1 cut(s) 265
BshVI ATCGAT 2 cut(s) 189, 340
BsiHKAI GWGCWC 1 cut(s) 350
BsiHKCI CYCGRG 1 cut(s) 599
BsiSI CCGG 1 cut(s) 570
BslI CCNNNNNNNGG 3 cut(s) 34, 160, 226
BsmAI GTCTC 5 cut(s) 218, 224, 278, 304, 371
BsmBI CGTCTC 2 cut(s) 218, 278
BsnI GGCC 1 cut(s) 265
Bso31I GGTCTC 1 cut(s) 224
BsoBI CYCGRG 1 cut(s) 599
Bsp1286I GDGCHC 1 cut(s) 350
Bsp143I GATC 4 cut(s) 12, 190, 247, 337
BspACI CCGC 4 cut(s) 19, 105, 177, 196
BspANI GGCC 1 cut(s) 265
BspCNI CTCAG 1 cut(s) 375
BspDI ATCGAT 2 cut(s) 189, 340
BspFNI CGCG 7 cut(s) 17, 19, 105, 177, 198, 240, 352
BspMI ACCTGC 2 cut(s) 60, 69
BspPI GGATC 1 cut(s) 255
BspTNI GGTCTC 1 cut(s) 224
BsrI ACTGG 1 cut(s) 271
BssECI CCNNGG 2 cut(s) 27, 243
BssMI GATC 4 cut(s) 12, 190, 247, 337
BssNI GRCGYC 2 cut(s) 32, 38
BssSI CACGAG 2 cut(s) 80, 155
Bst2BI CACGAG 2 cut(s) 80, 155
Bst2UI CCWGG 3 cut(s) 29, 245, 467
Bst4CI ACNGT 3 cut(s) 111, 417, 443
Bst6I CTCTTC 1 cut(s) 221
BstACI GRCGYC 2 cut(s) 32, 38
BstAPI GCANNNNNTGC 2 cut(s) 61, 644
BstC8I GCNNGC 2 cut(s) 134, 350
BstDEI CTNAG 1 cut(s) 362
BstENI CCTNNNNNAGG 1 cut(s) 158
BstF5I GGATG 1 cut(s) 506
BstFNI CGCG 7 cut(s) 17, 19, 105, 177, 198, 240, 352
BstH2I RGCGCY 1 cut(s) 211
BstHHI GCGC 5 cut(s) 19, 177, 210, 242, 354
BstKTI GATC 4 cut(s) 15, 193, 250, 340
BstMAI GTCTC 5 cut(s) 218, 224, 278, 304, 371
BstMBI GATC 4 cut(s) 12, 190, 247, 337
BstMWI GCNNNNNNNGC 3 cut(s) 61, 503, 644
BstNI CCWGG 3 cut(s) 29, 245, 467
BstSCI CCNGG 3 cut(s) 27, 243, 465
BstSFI CTRYAG 1 cut(s) 678
BstUI CGCG 7 cut(s) 17, 19, 105, 177, 198, 240, 352
BstV1I GCAGC 1 cut(s) 308
Bsu15I ATCGAT 2 cut(s) 189, 340
BsuRI GGCC 1 cut(s) 265
BsuTUI ATCGAT 2 cut(s) 189, 340
BtsCI GGATG 1 cut(s) 506
BtsIMutI CAGTG 2 cut(s) 134, 422
BveI ACCTGC 2 cut(s) 60, 69
Cac8I GCNNGC 2 cut(s) 134, 350
CfoI GCGC 5 cut(s) 19, 177, 210, 242, 354
Cfr13I GGNCC 2 cut(s) 151, 264
ClaI ATCGAT 2 cut(s) 189, 340
CseI GACGC 2 cut(s) 21, 27
Csp6I GTAC 1 cut(s) 202
CviAII CATG 3 cut(s) 335, 422, 617
CviJI RGCY 5 cut(s) 265, 299, 389, 487, 583
CviKI_1 RGCY 5 cut(s) 265, 299, 389, 487, 583
CviQI GTAC 1 cut(s) 202
DdeI CTNAG 1 cut(s) 362
DpnI GATC 4 cut(s) 14, 192, 249, 339
DpnII GATC 4 cut(s) 12, 190, 247, 337
DrdI GACNNNNNNGTC 1 cut(s) 31
DriI GACNNNNNGTC 1 cut(s) 64
DseDI GACNNNNNNGTC 1 cut(s) 31
Eam1104I CTCTTC 1 cut(s) 221
Eam1105I GACNNNNNGTC 1 cut(s) 64
EarI CTCTTC 1 cut(s) 221
Eco31I GGTCTC 1 cut(s) 224
Eco32I GATATC 1 cut(s) 670
Eco47I GGWCC 1 cut(s) 151
Eco88I CYCGRG 1 cut(s) 599
EcoNI CCTNNNNNAGG 1 cut(s) 158
EcoRII CCWGG 3 cut(s) 27, 243, 465
EcoRV GATATC 1 cut(s) 670
Esp3I CGTCTC 2 cut(s) 218, 278
FaeI CATG 3 cut(s) 338, 425, 620
FaiI YATR 8 cut(s) 222, 336, 423, 436, 534, 612, 618, 665
FalI AAGNNNNNCTT 2 cut(s) 218, 250
FatI CATG 3 cut(s) 334, 421, 616
Fnu4HI GCNGC 2 cut(s) 178, 297
FokI GGATG 1 cut(s) 493
Fsp4HI GCNGC 2 cut(s) 178, 297
GlaI GCGC 5 cut(s) 18, 176, 209, 241, 353
GluI GCNGC 2 cut(s) 178, 297
HaeII RGCGCY 1 cut(s) 211
HaeIII GGCC 1 cut(s) 265
HapII CCGG 1 cut(s) 570
HgaI GACGC 2 cut(s) 21, 27
HhaI GCGC 5 cut(s) 19, 177, 210, 242, 354
Hin1I GRCGYC 2 cut(s) 32, 38
Hin1II CATG 3 cut(s) 338, 425, 620
Hin6I GCGC 5 cut(s) 17, 175, 208, 240, 352
HinP1I GCGC 5 cut(s) 17, 175, 208, 240, 352
HinfI GANTC 2 cut(s) 124, 182
HpaII CCGG 1 cut(s) 570
HphI GGTGA 5 cut(s) 242, 248, 455, 481, 635
Hpy188I TCNGA 2 cut(s) 43, 547
Hpy188III TCNNGA 2 cut(s) 157, 599
Hpy99I CGWCG 4 cut(s) 37, 43, 70, 143
HpyAV CCTTC 5 cut(s) 154, 277, 520, 552, 573
HpyCH4III ACNGT 3 cut(s) 111, 417, 443
HpyCH4V TGCA 6 cut(s) 55, 132, 506, 631, 638, 647
HpyF10VI GCNNNNNNNGC 3 cut(s) 61, 503, 644
HpyF3I CTNAG 1 cut(s) 362
Hsp92I GRCGYC 2 cut(s) 32, 38
Hsp92II CATG 3 cut(s) 338, 425, 620
HspAI GCGC 5 cut(s) 17, 175, 208, 240, 352
Kzo9I GATC 4 cut(s) 12, 190, 247, 337
LmnI GCTCC 1 cut(s) 601
Lsp1109I GCAGC 1 cut(s) 308
LweI GCATC 3 cut(s) 515, 618, 634
MaeIII GTNAC 4 cut(s) 396, 437, 443, 469
MalI GATC 4 cut(s) 14, 192, 249, 339
MboI GATC 4 cut(s) 12, 190, 247, 337
MboII GAAGA 4 cut(s) 106, 208, 313, 588
MhlI GDGCHC 1 cut(s) 350
MluCI AATT 1 cut(s) 481
MlyI GAGTC 1 cut(s) 176
MmeI TCCRAC 1 cut(s) 21
MnlI CCTC 8 cut(s) 85, 89, 136, 164, 264, 269, 566, 614
MseI TTAA 2 cut(s) 450, 653
MslI CAYNNNNRTG 1 cut(s) 621
MspI CCGG 1 cut(s) 570
MspR9I CCNGG 3 cut(s) 29, 245, 467
MvaI CCWGG 3 cut(s) 29, 245, 467
MvnI CGCG 7 cut(s) 17, 19, 105, 177, 198, 240, 352
MwoI GCNNNNNNNGC 3 cut(s) 61, 503, 644
NdeII GATC 4 cut(s) 12, 190, 247, 337
NlaIII CATG 3 cut(s) 338, 425, 620
NmuCI GTSAC 3 cut(s) 437, 443, 469
PcsI WCGNNNNNNNCGW 2 cut(s) 29, 195
PfeI GAWTC 1 cut(s) 124
PkrI GCNGC 2 cut(s) 179, 298
PleI GAGTC 1 cut(s) 176
PpsI GAGTC 1 cut(s) 176
Psp6I CCWGG 3 cut(s) 27, 243, 465
PspGI CCWGG 3 cut(s) 27, 243, 465
PspPI GGNCC 2 cut(s) 151, 264
RsaI GTAC 1 cut(s) 203
RsaNI GTAC 1 cut(s) 202
RseI CAYNNNNRTG 1 cut(s) 621
SaqAI TTAA 2 cut(s) 450, 653
SatI GCNGC 2 cut(s) 178, 297
Sau3AI GATC 4 cut(s) 12, 190, 247, 337
Sau96I GGNCC 2 cut(s) 151, 264
SchI GAGTC 1 cut(s) 176
ScrFI CCNGG 3 cut(s) 29, 245, 467
SduI GDGCHC 1 cut(s) 350
SfaNI GCATC 3 cut(s) 515, 618, 634
SfcI CTRYAG 1 cut(s) 678
SinI GGWCC 1 cut(s) 151
SmiMI CAYNNNNRTG 1 cut(s) 621
Sse9I AATT 1 cut(s) 481
SsiI CCGC 4 cut(s) 19, 105, 177, 196
StyD4I CCNGG 3 cut(s) 27, 243, 465
TaaI ACNGT 3 cut(s) 111, 417, 443
TaqI TCGA 4 cut(s) 122, 189, 340, 372
TasI AATT 1 cut(s) 481
TauI GCSGC 1 cut(s) 180
TfiI GAWTC 1 cut(s) 124
Tru1I TTAA 2 cut(s) 450, 653
Tru9I TTAA 2 cut(s) 450, 653
TscAI CASTG 2 cut(s) 134, 422
TseFI GTSAC 3 cut(s) 437, 443, 469
TseI GCWGC 1 cut(s) 296
Tsp45I GTSAC 3 cut(s) 437, 443, 469
TspGWI ACGGA 2 cut(s) 302, 519
TspRI CASTG 2 cut(s) 134, 422
VpaK11BI GGWCC 1 cut(s) 151
XagI CCTNNNNNAGG 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.