Rh7AG446700

Phosphoinositide 3-kinase regulatory subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0001323
Physical Location & Seq
Reverse (-)
60653565 .. 60656062
2498 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG446700.1

Sequence Viewer

Length: 936 bp
ATGGACAAGCGTGCAGCGGGAGTTCCTCTTGCTCCATTTGATTCTTCATTACAAGTGTGTTCTGTCAGAGTTGGTGCATCATCTATGCCATGGCAGGATCCAGTGAATAAATCCTTTAGTTTAGCTAGTTCTATTCCAGCACCCAAGCTCGTGTCAGGATCATTCAACATCAGCAGTGGTTCTAAACAATTCTACAGAGTAGTACATGAACCAAATGGTAGGGATAATGACCAAACAACCTTTGTGAATAGCAAGTTTCAAGATATGGGATTATCTAGTGCTATAAAAGCAAGTTCTATTACTGTGGAAGATGCATCCTCTACAAGAAATCTAACAGGATTGCCCTCTTCGACAAGAGCTTCATCAATTCTAGATTCTGGTTGGTGGCCTCGTAGGGTGTTGGTTGCACACTTGCAAGAGCACCGGTCCGCTGTAAATGACATAGCCATATCAACTGATCATAGCTTCTTTATGAGTGCATCTGATGATTCCACTATCAAGGTATGGGATTCGAGAAAGTTGGAAAAGGACATCTCGTTTAGGTCAAGATTGACTTATCATCTACGGGGCTGCACTCAAGTTGTAGTTGGAGCATGTGATGCCAAGATACATATGTTTTCTGTTGATTACATTTCCAGAGGTCTCGGTAATATAGTTGAGAAGTATTCATGTGTTACTGATATCAAGGAGAAGGACACTAAAGAAGGGGCAATACGTAGCCTTTTGAATTTCTCTGTTGACAACTATGCAAGTCAAATGGTTATGTACAACACCCAAAATTGTGGGATCCATCTTTGGGATGTAAGAACAAATTCAGATTCTTGGACATTGAAAGCAACTCCGGAAGAGGGCCCTTGTGAAAATTGGTTTGTGTCAGGATCTTTGAGAGGTGTGCTCACTCTTTGGGATATGAGTGCATGGATCATAGGGACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000011 GO:0000151 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005768 GO:0005770 GO:0005942 GO:0006355 GO:0006357 GO:0006464 GO:0006468 GO:0006605 GO:0006623 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006886 GO:0006914 GO:0006996 GO:0007033 GO:0007034 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009846 GO:0009856 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010008 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019898 GO:0022414 GO:0023052 GO:0030242 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031461 GO:0031967 GO:0031975 GO:0031982 GO:0032182 GO:0032501 GO:0032502 GO:0032507 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0033036 GO:0033365 GO:0034067 GO:0034243 GO:0034271 GO:0034272 GO:0034613 GO:0035032 GO:0035556 GO:0036211 GO:0042886 GO:0043130 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045053 GO:0045184 GO:0045185 GO:0045324 GO:0045893 GO:0045935 GO:0045944 GO:0046907 GO:0048015 GO:0048017 GO:0048229 GO:0048308 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051235 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051716 GO:0060255 GO:0061695 GO:0061919 GO:0065007 GO:0065008 GO:0070727 GO:0071561 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0080008 GO:0080090 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0120095 GO:0140096 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04140 ko04371 map04136 map04138 map04140 map04371
Pfam Domains
Protein Families
HEAT Pkinase WD40

Protein Analysis

311

Amino Acids

34.34

Weight (kDa)

7.04

Isoelectric Point (pI)

47.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40 PF00400 134 - 170 4.9e-09 WD domain, G-beta repeat
Beta-prop_WDR5 PF25175 134 - 195 2.5e-08 WDR5 beta-propeller domain
WD40_Prp19 PF24814 134 - 279 9.8e-09 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 135 - 172 9.5e-06 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 136 - 308 6e-06 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 841
AciI CCGC 2 cut(s) 17, 429
AclWI GGATC 7 cut(s) 92, 105, 166, 781, 794, 886, 929
AcsI RAATTY 2 cut(s) 727, 811
AfaI GTAC 2 cut(s) 204, 767
AfiI CCNNNNNNNGG 2 cut(s) 796, 848
AgeI ACCGGT 1 cut(s) 423
AgsI TTSAA 4 cut(s) 166, 260, 727, 832
AluBI AGCT 4 cut(s) 125, 148, 359, 465
AluI AGCT 4 cut(s) 125, 148, 359, 465
Alw21I GWGCWC 2 cut(s) 423, 897
Alw26I GTCTC 1 cut(s) 647
AlwI GGATC 7 cut(s) 92, 105, 166, 781, 794, 886, 929
Aor13HI TCCGGA 1 cut(s) 841
AoxI GGCC 2 cut(s) 386, 850
ApaI GGGCCC 1 cut(s) 854
ApeKI GCWGC 2 cut(s) 14, 570
ApoI RAATTY 2 cut(s) 727, 811
AsiGI ACCGGT 1 cut(s) 423
Asp700I GAANNNNTTC 1 cut(s) 811
AspS9I GGNCC 3 cut(s) 426, 850, 851
AvaII GGWCC 1 cut(s) 426
BaeGI GKGCMC 1 cut(s) 854
BaeI ACNNNNGTAYC 2 cut(s) 599, 632
BamHI GGATCC 2 cut(s) 97, 786
BanII GRGCYC 1 cut(s) 854
BarI GAAGNNNNNNTAC 2 cut(s) 696, 728
BauI CACGAG 1 cut(s) 149
Bbv12I GWGCWC 2 cut(s) 423, 897
BbvI GCAGC 2 cut(s) 26, 557
BccI CCATC 1 cut(s) 798
BclI TGATCA 1 cut(s) 457
BcoDI GTCTC 1 cut(s) 647
BfaI CTAG 3 cut(s) 126, 276, 371
BfmI CTRYAG 1 cut(s) 193
BisI GCNGC 2 cut(s) 15, 571
BlsI GCNGC 2 cut(s) 16, 572
Bme18I GGWCC 1 cut(s) 426
BmgT120I GGNCC 3 cut(s) 426, 850, 851
BmiI GGNNCC 3 cut(s) 99, 788, 852
BmsI GCATC 5 cut(s) 86, 301, 323, 488, 589
BplI GAGNNNNNCTC 2 cut(s) 879, 911
BpuEI CTTGAG 1 cut(s) 561
BsaAI YACGTR 1 cut(s) 716
BsaI GGTCTC 1 cut(s) 647
BsaJI CCNNGG 1 cut(s) 89
BsaWI WCCGGW 2 cut(s) 423, 841
Bsc4I CCNNNNNNNGG 2 cut(s) 796, 848
Bse118I RCCGGY 1 cut(s) 423
Bse1I ACTGG 1 cut(s) 101
BseAI TCCGGA 1 cut(s) 841
BseDI CCNNGG 1 cut(s) 89
BseGI GGATG 2 cut(s) 314, 805
BseLI CCNNNNNNNGG 2 cut(s) 796, 848
BseNI ACTGG 1 cut(s) 101
BseSI GKGCMC 1 cut(s) 854
BseXI GCAGC 2 cut(s) 26, 557
BsgI GTGCAG 2 cut(s) 33, 556
BshFI GGCC 2 cut(s) 388, 852
BshTI ACCGGT 1 cut(s) 423
BsiHKAI GWGCWC 2 cut(s) 423, 897
BsiSI CCGG 2 cut(s) 424, 842
BslI CCNNNNNNNGG 2 cut(s) 796, 848
BsmAI GTCTC 1 cut(s) 647
BsnI GGCC 2 cut(s) 388, 852
Bso31I GGTCTC 1 cut(s) 647
Bsp120I GGGCCC 1 cut(s) 850
Bsp1286I GDGCHC 3 cut(s) 423, 854, 897
Bsp13I TCCGGA 1 cut(s) 841
Bsp1407I TGTACA 1 cut(s) 765
Bsp143I GATC 6 cut(s) 97, 158, 457, 786, 878, 921
Bsp19I CCATGG 1 cut(s) 89
BspACI CCGC 2 cut(s) 17, 429
BspANI GGCC 2 cut(s) 388, 852
BspEI TCCGGA 1 cut(s) 841
BspLI GGNNCC 3 cut(s) 99, 788, 852
BspPI GGATC 7 cut(s) 92, 105, 166, 781, 794, 886, 929
BspTNI GGTCTC 1 cut(s) 647
BsrFI RCCGGY 1 cut(s) 423
BsrGI TGTACA 1 cut(s) 765
BsrI ACTGG 1 cut(s) 101
BssAI RCCGGY 1 cut(s) 423
BssECI CCNNGG 1 cut(s) 89
BssMI GATC 6 cut(s) 97, 158, 457, 786, 878, 921
BssSI CACGAG 1 cut(s) 149
BssT1I CCWWGG 1 cut(s) 89
Bst2BI CACGAG 1 cut(s) 149
Bst4CI ACNGT 1 cut(s) 304
Bst6I CTCTTC 2 cut(s) 352, 840
BstAPI GCANNNNNTGC 1 cut(s) 599
BstAUI TGTACA 1 cut(s) 765
BstBAI YACGTR 1 cut(s) 716
BstC8I GCNNGC 1 cut(s) 12
BstDSI CCRYGG 1 cut(s) 89
BstF5I GGATG 2 cut(s) 314, 805
BstKTI GATC 6 cut(s) 100, 161, 460, 789, 881, 924
BstMAI GTCTC 1 cut(s) 647
BstMBI GATC 6 cut(s) 97, 158, 457, 786, 878, 921
BstMWI GCNNNNNNNGC 2 cut(s) 287, 599
BstNSI RCATGY 1 cut(s) 597
BstSFI CTRYAG 1 cut(s) 193
BstSLI GKGCMC 1 cut(s) 854
BstSNI TACGTA 1 cut(s) 716
BstV1I GCAGC 2 cut(s) 26, 557
BstX2I RGATCY 3 cut(s) 97, 786, 878
BstXI CCANNNNNNTGG 1 cut(s) 782
BstYI RGATCY 3 cut(s) 97, 786, 878
BsuRI GGCC 2 cut(s) 388, 852
BtgI CCRYGG 1 cut(s) 89
BtsCI GGATG 2 cut(s) 314, 805
BtsI GCAGTG 1 cut(s) 181
BtsIMutI CAGTG 2 cut(s) 108, 181
Cac8I GCNNGC 1 cut(s) 12
Cfr10I RCCGGY 1 cut(s) 423
Cfr13I GGNCC 3 cut(s) 426, 850, 851
CpoI CGGWCCG 1 cut(s) 426
Csp6I GTAC 2 cut(s) 203, 766
CspAI ACCGGT 1 cut(s) 423
CspI CGGWCCG 1 cut(s) 426
CviAII CATG 5 cut(s) 90, 206, 594, 669, 918
CviJI RGCY 9 cut(s) 125, 148, 359, 388, 446, 465, 570, 720, 852
CviKI_1 RGCY 9 cut(s) 125, 148, 359, 388, 446, 465, 570, 720, 852
CviQI GTAC 2 cut(s) 203, 766
DpnI GATC 6 cut(s) 99, 160, 459, 788, 880, 923
DpnII GATC 6 cut(s) 97, 158, 457, 786, 878, 921
Eam1104I CTCTTC 2 cut(s) 352, 840
EarI CTCTTC 2 cut(s) 352, 840
Eco105I TACGTA 1 cut(s) 716
Eco130I CCWWGG 1 cut(s) 89
Eco24I GRGCYC 1 cut(s) 854
Eco31I GGTCTC 1 cut(s) 647
Eco32I GATATC 1 cut(s) 682
Eco47I GGWCC 1 cut(s) 426
EcoO109I RGGNCCY 2 cut(s) 850, 851
EcoRV GATATC 1 cut(s) 682
EcoT14I CCWWGG 1 cut(s) 89
EcoT22I ATGCAT 1 cut(s) 316
EcoT38I GRGCYC 1 cut(s) 854
ErhI CCWWGG 1 cut(s) 89
FaeI CATG 5 cut(s) 93, 209, 597, 672, 921
FalI AAGNNNNNCTT 2 cut(s) 538, 570
FatI CATG 5 cut(s) 89, 205, 593, 668, 917
FauI CCCGC 1 cut(s) 10
FauNDI CATATG 1 cut(s) 612
FbaI TGATCA 1 cut(s) 457
Fnu4HI GCNGC 2 cut(s) 15, 571
FokI GGATG 2 cut(s) 301, 812
FriOI GRGCYC 1 cut(s) 854
Fsp4HI GCNGC 2 cut(s) 15, 571
FspBI CTAG 3 cut(s) 126, 276, 371
GluI GCNGC 2 cut(s) 15, 571
HaeIII GGCC 2 cut(s) 388, 852
HapII CCGG 2 cut(s) 424, 842
Hin1II CATG 5 cut(s) 93, 209, 597, 672, 921
HincII GTYRAC 1 cut(s) 739
HindII GTYRAC 1 cut(s) 739
HinfI GANTC 5 cut(s) 41, 374, 488, 509, 818
HpaII CCGG 2 cut(s) 424, 842
Hpy166II GTNNAC 1 cut(s) 739
Hpy188I TCNGA 3 cut(s) 68, 484, 817
Hpy188III TCNNGA 8 cut(s) 156, 260, 371, 513, 546, 636, 842, 876
Hpy8I GTNNAC 1 cut(s) 739
HpyAV CCTTC 2 cut(s) 685, 698
HpyCH4III ACNGT 1 cut(s) 304
HpyCH4IV ACGT 1 cut(s) 715
HpyCH4V TGCA 9 cut(s) 14, 77, 314, 407, 415, 479, 573, 749, 917
HpyF10VI GCNNNNNNNGC 2 cut(s) 287, 599
HpySE526I ACGT 1 cut(s) 715
Hsp92II CATG 5 cut(s) 93, 209, 597, 672, 921
Kpn2I TCCGGA 1 cut(s) 841
Ksp22I TGATCA 1 cut(s) 457
Kzo9I GATC 6 cut(s) 97, 158, 457, 786, 878, 921
LmnI GCTCC 2 cut(s) 37, 590
Lsp1109I GCAGC 2 cut(s) 26, 557
LweI GCATC 5 cut(s) 86, 301, 323, 488, 589
MaeI CTAG 3 cut(s) 126, 276, 371
MaeII ACGT 1 cut(s) 715
MaeIII GTNAC 1 cut(s) 673
MalI GATC 6 cut(s) 99, 160, 459, 788, 880, 923
MboI GATC 6 cut(s) 97, 158, 457, 786, 878, 921
MboII GAAGA 4 cut(s) 36, 320, 339, 857
MflI RGATCY 3 cut(s) 97, 786, 878
MhlI GDGCHC 3 cut(s) 423, 854, 897
MluCI AATT 6 cut(s) 188, 366, 727, 778, 811, 862
MmeI TCCRAC 2 cut(s) 501, 568
MnlI CCTC 7 cut(s) 36, 328, 355, 399, 632, 841, 881
Mph1103I ATGCAT 1 cut(s) 316
MroI TCCGGA 1 cut(s) 841
MroXI GAANNNNTTC 1 cut(s) 811
MseI TTAA 1 cut(s) 934
MspA1I CMGCKG 2 cut(s) 17, 431
MspI CCGG 2 cut(s) 424, 842
MwoI GCNNNNNNNGC 2 cut(s) 287, 599
NcoI CCATGG 1 cut(s) 89
NdeI CATATG 1 cut(s) 612
NdeII GATC 6 cut(s) 97, 158, 457, 786, 878, 921
NlaIII CATG 5 cut(s) 93, 209, 597, 672, 921
NlaIV GGNNCC 3 cut(s) 99, 788, 852
NsiI ATGCAT 1 cut(s) 316
NspI RCATGY 1 cut(s) 597
PdmI GAANNNNTTC 1 cut(s) 811
PfeI GAWTC 5 cut(s) 41, 374, 488, 509, 818
PinAI ACCGGT 1 cut(s) 423
PkrI GCNGC 2 cut(s) 16, 572
Ppu21I YACGTR 1 cut(s) 716
PspN4I GGNNCC 3 cut(s) 99, 788, 852
PspOMI GGGCCC 1 cut(s) 850
PspPI GGNCC 3 cut(s) 426, 850, 851
PsuI RGATCY 3 cut(s) 97, 786, 878
RsaI GTAC 2 cut(s) 204, 767
RsaNI GTAC 2 cut(s) 203, 766
Rsr2I CGGWCCG 1 cut(s) 426
RsrII CGGWCCG 1 cut(s) 426
SaqAI TTAA 1 cut(s) 934
SatI GCNGC 2 cut(s) 15, 571
Sau3AI GATC 6 cut(s) 97, 158, 457, 786, 878, 921
Sau96I GGNCC 3 cut(s) 426, 850, 851
SduI GDGCHC 3 cut(s) 423, 854, 897
SfaNI GCATC 5 cut(s) 86, 301, 323, 488, 589
SfcI CTRYAG 1 cut(s) 193
SinI GGWCC 1 cut(s) 426
SmlI CTYRAG 1 cut(s) 576
SmoI CTYRAG 1 cut(s) 576
SnaBI TACGTA 1 cut(s) 716
Sse9I AATT 6 cut(s) 188, 366, 727, 778, 811, 862
SsiI CCGC 2 cut(s) 17, 429
SspMI CTAG 3 cut(s) 126, 276, 371
StyI CCWWGG 1 cut(s) 89
TaaI ACNGT 1 cut(s) 304
TaiI ACGT 1 cut(s) 718
TaqI TCGA 2 cut(s) 350, 512
TasI AATT 6 cut(s) 188, 366, 727, 778, 811, 862
TatI WGTACW 2 cut(s) 202, 765
TfiI GAWTC 5 cut(s) 41, 374, 488, 509, 818
Tru1I TTAA 1 cut(s) 934
Tru9I TTAA 1 cut(s) 934
TscAI CASTG 2 cut(s) 108, 181
TseI GCWGC 2 cut(s) 14, 570
TspDTI ATGAA 4 cut(s) 36, 222, 351, 657
TspRI CASTG 2 cut(s) 108, 181
VpaK11BI GGWCC 1 cut(s) 426
XapI RAATTY 2 cut(s) 727, 811
XbaI TCTAGA 1 cut(s) 370
XceI RCATGY 1 cut(s) 597
XmnI GAANNNNTTC 1 cut(s) 811
XspI CTAG 3 cut(s) 126, 276, 371
Zsp2I ATGCAT 1 cut(s) 316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.