Rh1BG096000

Phosphoinositide 3-kinase regulatory subunit

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Reverse (-)
16754773 .. 16755516
744 bp
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UTR
Exon/CDS
Intron
Rh1BG096000.1

Sequence Viewer

Length: 744 bp
ATGGAACTCCTTCAAATTAACATCCATGCTGTGAGCGGTAAATCTTCTCAGGACATGATTGCAATGCAGAACATGAATTTGACAAAGGGCTCACTGGGAAAGAAAGTAGAGATGGATAAAGGTTTCAAATGCGATCAATTTGAACTTCTCGGTGATATCAATACCCTTCTTAGGGATGTTAAACAAAGTAATCATTATTCTAATACGAAGCCAATGGTGGAGGACAACACTAATTCTGCATTTTCCCAAAATCTTGGAAACTATGGCATGCAATCTCCTGGTGAATTACTTCAGACTATCTCCCATGCGTTTAGGAGAAATGATCATCCTTTTCTAAAAAAGATTACAATGAATGATTTGAATTCATTGATATCCAAGTATGACAGCCAGTCAGATACCTTTGGTATGCCTTTTTTACCATTACCTGAAGACAGTTTGAGATATGAGGGCATGGTTCTGATTACCTCTTTGCTATACTCGTGCAAACGCAATGTCAAATTGCCTCATTTAAGGAGGAGGGCGATACTTTTGCTGAAGTCATCTGCATTGTATATTGATGATGAAAACCGGTTGCAGCGTGTAATTCCATATGTTGTTGCAATGCTTTCAGATCAAGCTGCAATTGTGCATTGTGCAGCCTTGGAGACATTATGTGACATTCTCCCTTTAGTTCGAGATTTTCCTCCTAGTGATGCAAAAAAAATTTCTGAAGTATATTCTGCCAATGCTTTCCATGCTTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000011 GO:0000151 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005737 GO:0005768 GO:0005770 GO:0005942 GO:0006355 GO:0006357 GO:0006464 GO:0006468 GO:0006605 GO:0006623 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006886 GO:0006914 GO:0006996 GO:0007033 GO:0007034 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009846 GO:0009856 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010008 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0019898 GO:0022414 GO:0023052 GO:0030242 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031461 GO:0031967 GO:0031975 GO:0031982 GO:0032182 GO:0032501 GO:0032502 GO:0032507 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0033036 GO:0033365 GO:0034067 GO:0034243 GO:0034271 GO:0034272 GO:0034613 GO:0035032 GO:0035556 GO:0036211 GO:0042886 GO:0043130 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045053 GO:0045184 GO:0045185 GO:0045324 GO:0045893 GO:0045935 GO:0045944 GO:0046907 GO:0048015 GO:0048017 GO:0048229 GO:0048308 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051235 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051716 GO:0060255 GO:0061695 GO:0061919 GO:0065007 GO:0065008 GO:0070727 GO:0071561 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0080008 GO:0080090 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0120095 GO:0140096 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
Pfam Domains
Protein Families

Protein Analysis

247

Amino Acids

27.81

Weight (kDa)

7.05

Isoelectric Point (pI)

50.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS15-like_hel PF22956 154 - 233 4.5e-21 VPS15-like, helical domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 36
AciI CCGC 1 cut(s) 36
AcsI RAATTY 3 cut(s) 76, 361, 702
AcuI CTGAAG 4 cut(s) 275, 447, 554, 729
AfiI CCNNNNNNNGG 2 cut(s) 171, 172
AgeI ACCGGT 1 cut(s) 567
AgsI TTSAA 4 cut(s) 14, 127, 143, 361
AhdI GACNNNNNGTC 1 cut(s) 388
AjnI CCWGG 1 cut(s) 277
AluBI AGCT 1 cut(s) 617
AluI AGCT 1 cut(s) 617
Alw26I GTCTC 1 cut(s) 638
ApeKI GCWGC 3 cut(s) 574, 617, 635
ApoI RAATTY 3 cut(s) 76, 361, 702
ArsI GACNNNNNNTTYG 2 cut(s) 477, 509
AsiGI ACCGGT 1 cut(s) 567
Asp700I GAANNNNTTC 2 cut(s) 9, 288
AsuHPI GGTGA 2 cut(s) 164, 293
BanII GRGCYC 1 cut(s) 92
BauI CACGAG 1 cut(s) 478
BbsI GAAGAC 1 cut(s) 435
BbvI GCAGC 3 cut(s) 586, 604, 647
BccI CCATC 1 cut(s) 106
BcgI CGANNNNNNTGC 2 cut(s) 511, 545
BciT130I CCWGG 1 cut(s) 279
BclI TGATCA 1 cut(s) 322
BcoDI GTCTC 1 cut(s) 638
BfaI CTAG 1 cut(s) 687
BisI GCNGC 3 cut(s) 575, 618, 636
BlsI GCNGC 3 cut(s) 576, 619, 637
Bme1390I CCNGG 1 cut(s) 279
BmeRI GACNNNNNGTC 1 cut(s) 388
BmrFI CCNGG 1 cut(s) 279
BmrI ACTGGG 1 cut(s) 104
BmsI GCATC 1 cut(s) 682
BmuI ACTGGG 1 cut(s) 104
BpiI GAAGAC 1 cut(s) 435
BsaJI CCNNGG 1 cut(s) 639
BsaWI WCCGGW 1 cut(s) 567
Bsc4I CCNNNNNNNGG 2 cut(s) 171, 172
Bse118I RCCGGY 1 cut(s) 567
Bse1I ACTGG 2 cut(s) 99, 388
Bse3DI GCAATG 3 cut(s) 69, 496, 606
BseBI CCWGG 1 cut(s) 279
BseDI CCNNGG 1 cut(s) 639
BseGI GGATG 3 cut(s) 21, 181, 325
BseLI CCNNNNNNNGG 2 cut(s) 171, 172
BseMI GCAATG 3 cut(s) 69, 496, 606
BseMII CTCAG 1 cut(s) 62
BseNI ACTGG 2 cut(s) 99, 388
BseRI GAGGAG 1 cut(s) 529
BseXI GCAGC 3 cut(s) 586, 604, 647
BsgI GTGCAG 1 cut(s) 654
BshTI ACCGGT 1 cut(s) 567
BsiSI CCGG 1 cut(s) 568
BslI CCNNNNNNNGG 2 cut(s) 171, 172
BsmAI GTCTC 1 cut(s) 638
Bsp1286I GDGCHC 1 cut(s) 92
Bsp143I GATC 3 cut(s) 133, 322, 610
BspACI CCGC 1 cut(s) 36
BspCNI CTCAG 1 cut(s) 61
BsrBI CCGCTC 1 cut(s) 36
BsrDI GCAATG 3 cut(s) 69, 496, 606
BsrFI RCCGGY 1 cut(s) 567
BsrI ACTGG 2 cut(s) 99, 388
BssAI RCCGGY 1 cut(s) 567
BssECI CCNNGG 1 cut(s) 639
BssMI GATC 3 cut(s) 133, 322, 610
BssSI CACGAG 1 cut(s) 478
BssT1I CCWWGG 1 cut(s) 639
Bst2BI CACGAG 1 cut(s) 478
Bst2UI CCWGG 1 cut(s) 279
Bst4CI ACNGT 1 cut(s) 434
BstC8I GCNNGC 1 cut(s) 269
BstDEI CTNAG 2 cut(s) 48, 170
BstF5I GGATG 3 cut(s) 21, 181, 325
BstKTI GATC 3 cut(s) 136, 325, 613
BstMAI GTCTC 1 cut(s) 638
BstMBI GATC 3 cut(s) 133, 322, 610
BstMWI GCNNNNNNNGC 1 cut(s) 734
BstNI CCWGG 1 cut(s) 279
BstNSI RCATGY 1 cut(s) 271
BstSCI CCNGG 1 cut(s) 277
BstV1I GCAGC 3 cut(s) 586, 604, 647
BstV2I GAAGAC 1 cut(s) 435
BstXI CCANNNNNNTGG 1 cut(s) 254
BtsCI GGATG 3 cut(s) 21, 181, 325
BtsIMutI CAGTG 1 cut(s) 92
Cac8I GCNNGC 1 cut(s) 269
Cfr10I RCCGGY 1 cut(s) 567
CspAI ACCGGT 1 cut(s) 567
CviAII CATG 7 cut(s) 26, 55, 73, 268, 305, 451, 734
CviJI RGCY 5 cut(s) 90, 211, 387, 617, 638
CviKI_1 RGCY 5 cut(s) 90, 211, 387, 617, 638
DdeI CTNAG 2 cut(s) 48, 170
DpnI GATC 3 cut(s) 135, 324, 612
DpnII GATC 3 cut(s) 133, 322, 610
DriI GACNNNNNGTC 1 cut(s) 388
Eam1105I GACNNNNNGTC 1 cut(s) 388
Eco130I CCWWGG 1 cut(s) 639
Eco24I GRGCYC 1 cut(s) 92
Eco32I GATATC 2 cut(s) 157, 372
Eco57I CTGAAG 4 cut(s) 275, 447, 554, 729
EcoRI GAATTC 1 cut(s) 361
EcoRII CCWGG 1 cut(s) 277
EcoRV GATATC 2 cut(s) 157, 372
EcoT14I CCWWGG 1 cut(s) 639
EcoT38I GRGCYC 1 cut(s) 92
ErhI CCWWGG 1 cut(s) 639
FaeI CATG 7 cut(s) 29, 58, 76, 271, 308, 454, 737
FatI CATG 7 cut(s) 25, 54, 72, 267, 304, 450, 733
FauNDI CATATG 1 cut(s) 589
FbaI TGATCA 1 cut(s) 322
Fnu4HI GCNGC 3 cut(s) 575, 618, 636
FokI GGATG 3 cut(s) 8, 188, 312
FriOI GRGCYC 1 cut(s) 92
Fsp4HI GCNGC 3 cut(s) 575, 618, 636
FspBI CTAG 1 cut(s) 687
GluI GCNGC 3 cut(s) 575, 618, 636
HapII CCGG 1 cut(s) 568
Hin1II CATG 7 cut(s) 29, 58, 76, 271, 308, 454, 737
HpaII CCGG 1 cut(s) 568
HphI GGTGA 2 cut(s) 164, 293
Hpy188I TCNGA 5 cut(s) 294, 394, 459, 610, 709
Hpy188III TCNNGA 3 cut(s) 50, 674, 741
HpyAV CCTTC 2 cut(s) 20, 176
HpyCH4III ACNGT 1 cut(s) 434
HpyF10VI GCNNNNNNNGC 1 cut(s) 734
HpyF3I CTNAG 2 cut(s) 48, 170
Hsp92II CATG 7 cut(s) 29, 58, 76, 271, 308, 454, 737
Ksp22I TGATCA 1 cut(s) 322
Kzo9I GATC 3 cut(s) 133, 322, 610
LpnPI CCDG 7 cut(s) 35, 80, 264, 291, 401, 438, 581
Lsp1109I GCAGC 3 cut(s) 586, 604, 647
LweI GCATC 1 cut(s) 682
MaeI CTAG 1 cut(s) 687
MaeIII GTNAC 1 cut(s) 653
MalI GATC 3 cut(s) 135, 324, 612
MbiI CCGCTC 1 cut(s) 36
MboI GATC 3 cut(s) 133, 322, 610
MboII GAAGA 2 cut(s) 36, 440
MfeI CAATTG 1 cut(s) 621
MhlI GDGCHC 1 cut(s) 92
MnlI CCTC 7 cut(s) 214, 439, 475, 507, 510, 513, 693
MroXI GAANNNNTTC 2 cut(s) 9, 288
MseI TTAA 3 cut(s) 18, 180, 509
MspI CCGG 1 cut(s) 568
MspR9I CCNGG 1 cut(s) 279
MunI CAATTG 1 cut(s) 621
MvaI CCWGG 1 cut(s) 279
MwoI GCNNNNNNNGC 1 cut(s) 734
NdeI CATATG 1 cut(s) 589
NdeII GATC 3 cut(s) 133, 322, 610
NlaIII CATG 7 cut(s) 29, 58, 76, 271, 308, 454, 737
NmuCI GTSAC 1 cut(s) 653
NspI RCATGY 1 cut(s) 271
PaeI GCATGC 1 cut(s) 271
PdmI GAANNNNTTC 2 cut(s) 9, 288
PinAI ACCGGT 1 cut(s) 567
PkrI GCNGC 3 cut(s) 576, 619, 637
Psp6I CCWGG 1 cut(s) 277
PspGI CCWGG 1 cut(s) 277
SaqAI TTAA 3 cut(s) 18, 180, 509
SatI GCNGC 3 cut(s) 575, 618, 636
Sau3AI GATC 3 cut(s) 133, 322, 610
ScrFI CCNGG 1 cut(s) 279
SduI GDGCHC 1 cut(s) 92
SetI ASST 5 cut(s) 124, 401, 427, 467, 619
SfaNI GCATC 1 cut(s) 682
SphI GCATGC 1 cut(s) 271
SsiI CCGC 1 cut(s) 36
SspMI CTAG 1 cut(s) 687
StyD4I CCNGG 1 cut(s) 277
StyI CCWWGG 1 cut(s) 639
TaaI ACNGT 1 cut(s) 434
TaqI TCGA 1 cut(s) 673
Tru1I TTAA 3 cut(s) 18, 180, 509
Tru9I TTAA 3 cut(s) 18, 180, 509
TscAI CASTG 1 cut(s) 99
TseFI GTSAC 1 cut(s) 653
TseI GCWGC 3 cut(s) 574, 617, 635
Tsp45I GTSAC 1 cut(s) 653
TspDTI ATGAA 4 cut(s) 89, 354, 365, 576
TspRI CASTG 1 cut(s) 99
XapI RAATTY 3 cut(s) 76, 361, 702
XceI RCATGY 1 cut(s) 271
XmnI GAANNNNTTC 2 cut(s) 9, 288
XspI CTAG 1 cut(s) 687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.