Belongs to the 'GDSL' lipolytic enzyme family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G16220 AT4G16230 |
| fragaria_vesca | FvH4_4g19851 FvH4_4g19871 FvH4_4g19872 FvH4_4g19872 FvH4_4g19872 |
| rosa_chinensis | RchiOBHm_Chr4g0425431 RchiOBHm_Chr4g0425441 RchiOBHm_Chr4g0425461 RchiOBHm_Chr4g0425491 RchiOBHm_Chr4g0425641 |
| rosa_laevigata | RLG00000007351 RLG00000007369 RLG00000031471 |
| rosa_multiflora | Rmu_sc0001900.1_g000024 Rmu_sc0001900.1_g000036 Rmu_sc0003958.1_g000016 Rmu_sc0004566.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00064710 Rroxscaffold_5G00367410 Rroxscaffold_5G00367420 Rroxscaffold_5G00367580 Rroxscaffold_6G00425630 |
| rosa_rugosa | Rorug04G0202900 Rorug04G0203000 Rorug04G0203400 Rorug04G0204500 Rorug04G0204600 |
| rosa_samantha | Rh3BG001300 Rh4AG260100 Rh4AG260200 Rh4AG261800 Rh4BG265900 Rh4BG266000 Rh4BG267800 Rh4CG277300 Rh4CG277500 Rh4CG278900 Rh4DG262100 Rh4DG262200 Rh4DG262500 Rh4DG263600 |
| rosa_wichuraiana | Rw4G022530 Rw4G022540 Rw4G022630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 26 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 170 |
| AgsI | TTSAA | 1 cut(s) | 116 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 49, 81 |
| AoxI | GGCC | 1 cut(s) | 7 |
| ApoI | RAATTY | 1 cut(s) | 26 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 64 |
| AsuC2I | CCSGG | 1 cut(s) | 195 |
| BccI | CCATC | 2 cut(s) | 14, 226 |
| BcnI | CCSGG | 1 cut(s) | 195 |
| BfaI | CTAG | 1 cut(s) | 110 |
| Bme1390I | CCNGG | 1 cut(s) | 195 |
| BmrFI | CCNGG | 1 cut(s) | 195 |
| BpuMI | CCSGG | 1 cut(s) | 195 |
| Bsa29I | ATCGAT | 1 cut(s) | 177 |
| BsaJI | CCNNGG | 2 cut(s) | 34, 150 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 49, 79 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 170 |
| BseCI | ATCGAT | 1 cut(s) | 177 |
| BseDI | CCNNGG | 2 cut(s) | 34, 150 |
| BseGI | GGATG | 1 cut(s) | 30 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 170 |
| BshFI | GGCC | 1 cut(s) | 9 |
| BshVI | ATCGAT | 1 cut(s) | 177 |
| BsiSI | CCGG | 1 cut(s) | 194 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 170 |
| BsnI | GGCC | 1 cut(s) | 9 |
| BspANI | GGCC | 1 cut(s) | 9 |
| BspDI | ATCGAT | 1 cut(s) | 177 |
| BssECI | CCNNGG | 2 cut(s) | 34, 150 |
| BssT1I | CCWWGG | 2 cut(s) | 34, 150 |
| BstF5I | GGATG | 1 cut(s) | 30 |
| BstSCI | CCNGG | 1 cut(s) | 193 |
| Bsu15I | ATCGAT | 1 cut(s) | 177 |
| BsuRI | GGCC | 1 cut(s) | 9 |
| BsuTUI | ATCGAT | 1 cut(s) | 177 |
| BtsCI | GGATG | 1 cut(s) | 30 |
| BtsI | GCAGTG | 1 cut(s) | 57 |
| BtsIMutI | CAGTG | 1 cut(s) | 57 |
| ClaI | ATCGAT | 1 cut(s) | 177 |
| CviJI | RGCY | 3 cut(s) | 9, 155, 189 |
| CviKI_1 | RGCY | 3 cut(s) | 9, 155, 189 |
| Eco130I | CCWWGG | 2 cut(s) | 34, 150 |
| EcoT14I | CCWWGG | 2 cut(s) | 34, 150 |
| ErhI | CCWWGG | 2 cut(s) | 34, 150 |
| FaiI | YATR | 1 cut(s) | 232 |
| FokI | GGATG | 1 cut(s) | 17 |
| FspBI | CTAG | 1 cut(s) | 110 |
| HaeIII | GGCC | 1 cut(s) | 9 |
| HapII | CCGG | 1 cut(s) | 194 |
| HinfI | GANTC | 3 cut(s) | 104, 142, 174 |
| HpaII | CCGG | 1 cut(s) | 194 |
| Hpy188I | TCNGA | 2 cut(s) | 19, 185 |
| HpyCH4V | TGCA | 1 cut(s) | 50 |
| LpnPI | CCDG | 2 cut(s) | 96, 207 |
| MaeI | CTAG | 1 cut(s) | 110 |
| MaeIII | GTNAC | 1 cut(s) | 139 |
| MboII | GAAGA | 1 cut(s) | 224 |
| MluCI | AATT | 2 cut(s) | 26, 88 |
| MlyI | GAGTC | 1 cut(s) | 136 |
| MnlI | CCTC | 1 cut(s) | 174 |
| MroXI | GAANNNNTTC | 1 cut(s) | 64 |
| MspI | CCGG | 1 cut(s) | 194 |
| MspR9I | CCNGG | 1 cut(s) | 195 |
| NciI | CCSGG | 1 cut(s) | 195 |
| NmuCI | GTSAC | 1 cut(s) | 139 |
| PdmI | GAANNNNTTC | 1 cut(s) | 64 |
| PfeI | GAWTC | 2 cut(s) | 104, 174 |
| PleI | GAGTC | 1 cut(s) | 136 |
| PpsI | GAGTC | 1 cut(s) | 136 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 116, 148 |
| SchI | GAGTC | 1 cut(s) | 136 |
| ScrFI | CCNGG | 1 cut(s) | 195 |
| SgeI | CNNG | 6 cut(s) | 47, 95, 122, 163, 206, 207 |
| Sse9I | AATT | 2 cut(s) | 26, 88 |
| SspMI | CTAG | 1 cut(s) | 110 |
| StyD4I | CCNGG | 1 cut(s) | 193 |
| StyI | CCWWGG | 2 cut(s) | 34, 150 |
| TaqI | TCGA | 1 cut(s) | 177 |
| TasI | AATT | 2 cut(s) | 26, 88 |
| TfiI | GAWTC | 2 cut(s) | 104, 174 |
| TscAI | CASTG | 1 cut(s) | 57 |
| TseFI | GTSAC | 1 cut(s) | 139 |
| Tsp45I | GTSAC | 1 cut(s) | 139 |
| TspDTI | ATGAA | 1 cut(s) | 19 |
| TspRI | CASTG | 1 cut(s) | 57 |
| XapI | RAATTY | 1 cut(s) | 26 |
| XmnI | GAANNNNTTC | 1 cut(s) | 64 |
| XspI | CTAG | 1 cut(s) | 110 |