RLG00000007168

Histone-lysine N-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0002127
Physical Location & Seq
Reverse (-)
14232791 .. 14235113
2323 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007168

Sequence Viewer

Length: 828 bp
ATGGCAATGACAAAGGAGCCCGCCGACCGTCAGGTCCAAGCTCGCTTCTTGATCGCCGCTTACAACCTCGCCGTCACTTCGCCGTCGAGTTTCCAGGTGCTACTCTCTCTTCAGGGCCAGCCGCAGGACTCCGCCGACGCTCAGTTCCTGCATTCTCTGATTTCGACCCTCTGCCCTCCGCCGCAGCAGCAACTGTTTTCGGTGGAGCTCACGGCGGCGCTGTTGGCCAAGGACAAGATGAATGCGTTTGGATTGATGGAGCCCCCTTCGGAATTTGGGCTGAGATCGAGCAGAGCCTATGGGATTTATCCCAAGGCCTCGTTTTTCAACCATGATTGTCTCCCCAATGCGTGCCGATTTGATTACGTTGATGAAGGCAGCACGGAGATTATTGTGAGGATGATTCACGATGTTCCGGAGGGGAGGGAGATTTGCCTGAGCTACTTTCCTGTTAACCAGGCTTATTCGAGCAGGCAGAGGACTTTGGCTGAGGACTATGGGTTTGTGTGTCAATGTGATCGATGCAAGGTTGAGGCAAATTGGTCTGACAATGAGGAGGTTGAGGAGGAAGGTGGTTCGGCTGAGGTTATGGATGAGGACCAAGACCAGGAAATGGAAGGAGAATCGGAATCAGAAGCTGGGAGTGACATTGAAGTAGAAGCTCAAGGAGAAGCTGATTTTCCACATGCCTATTTCTTTTGGTCATGGACAAAATGGGCTCTCTTTGGATGGCTAACTGCTCCTTATTGCTGCTTTATAAGCTGTGACTTTGCAACATTGGTAAAGTACCGGGTGGCCAACAGCTATCATTTGAAGTATATGTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SET

Protein Analysis

276

Amino Acids

31.06

Weight (kDa)

4.42

Isoelectric Point (pI)

53.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SET PF00856 104 - 148 7.2e-08 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 758
AasI GACNNNNNNGTC 1 cut(s) 32
AccB7I CCANNNNNTGG 1 cut(s) 613
AccIII TCCGGA 1 cut(s) 415
AciI CCGC 7 cut(s) 21, 57, 122, 132, 179, 182, 215
AcoI YGGCCR 2 cut(s) 225, 795
AcsI RAATTY 1 cut(s) 272
AcuI CTGAAG 1 cut(s) 95
AfaI GTAC 1 cut(s) 788
AfiI CCNNNNNNNGG 3 cut(s) 124, 607, 613
AgsI TTSAA 3 cut(s) 328, 653, 814
AjnI CCWGG 3 cut(s) 93, 456, 606
AluBI AGCT 8 cut(s) 41, 208, 441, 638, 662, 674, 762, 804
AluI AGCT 8 cut(s) 41, 208, 441, 638, 662, 674, 762, 804
Alw21I GWGCWC 1 cut(s) 210
Alw26I GTCTC 1 cut(s) 344
AlwNI CAGNNNCTG 3 cut(s) 148, 193, 638
Aor13HI TCCGGA 1 cut(s) 415
AoxI GGCC 4 cut(s) 115, 225, 315, 795
ApeKI GCWGC 4 cut(s) 184, 187, 378, 750
ApoI RAATTY 1 cut(s) 272
ArsI GACNNNNNNTTYG 2 cut(s) 485, 517
AspLEI GCGC 1 cut(s) 220
AspS9I GGNCC 3 cut(s) 34, 115, 598
AsuC2I CCSGG 1 cut(s) 791
AvaII GGWCC 2 cut(s) 34, 598
BalI TGGCCA 2 cut(s) 227, 797
BanII GRGCYC 4 cut(s) 21, 210, 264, 721
Bbv12I GWGCWC 1 cut(s) 210
BbvCI CCTCAGC 2 cut(s) 489, 582
BbvI GCAGC 4 cut(s) 196, 199, 390, 737
BccI CCATC 2 cut(s) 250, 723
BceAI ACGGC 3 cut(s) 56, 67, 228
BciT130I CCWGG 3 cut(s) 95, 458, 608
BcnI CCSGG 1 cut(s) 791
BcoDI GTCTC 1 cut(s) 344
BfoI RGCGCY 1 cut(s) 221
BisI GCNGC 8 cut(s) 57, 122, 182, 185, 188, 216, 379, 751
BlsI GCNGC 8 cut(s) 58, 123, 183, 186, 189, 217, 380, 752
Bme1390I CCNGG 4 cut(s) 95, 458, 608, 791
Bme18I GGWCC 2 cut(s) 34, 598
BmgT120I GGNCC 3 cut(s) 34, 115, 598
BmiI GGNNCC 2 cut(s) 18, 261
BmrFI CCNGG 4 cut(s) 95, 458, 608, 791
BmsI GCATC 1 cut(s) 512
Bpu10I CCTNAGC 3 cut(s) 437, 489, 582
BpuEI CTTGAG 1 cut(s) 648
BpuMI CCSGG 1 cut(s) 791
Bsa29I ATCGAT 1 cut(s) 520
BsaJI CCNNGG 2 cut(s) 228, 312
BsaWI WCCGGW 1 cut(s) 415
Bsc4I CCNNNNNNNGG 3 cut(s) 124, 607, 613
Bse3DI GCAATG 1 cut(s) 12
BseAI TCCGGA 1 cut(s) 415
BseBI CCWGG 3 cut(s) 95, 458, 608
BseCI ATCGAT 1 cut(s) 520
BseDI CCNNGG 2 cut(s) 228, 312
BseGI GGATG 3 cut(s) 405, 598, 734
BseLI CCNNNNNNNGG 3 cut(s) 124, 607, 613
BseMI GCAATG 1 cut(s) 12
BseMII CTCAG 5 cut(s) 155, 272, 428, 480, 573
BseRI GAGGAG 2 cut(s) 569, 578
BseXI GCAGC 4 cut(s) 196, 199, 390, 737
BseYI CCCAGC 1 cut(s) 638
Bsh1285I CGRYCG 1 cut(s) 28
BshFI GGCC 4 cut(s) 117, 227, 317, 797
BshVI ATCGAT 1 cut(s) 520
BsiEI CGRYCG 1 cut(s) 28
BsiHKAI GWGCWC 1 cut(s) 210
BsiSI CCGG 2 cut(s) 416, 790
BslI CCNNNNNNNGG 3 cut(s) 124, 607, 613
BsmAI GTCTC 1 cut(s) 344
BsmI GAATGC 2 cut(s) 151, 247
BsnI GGCC 4 cut(s) 117, 227, 317, 797
Bsp1286I GDGCHC 4 cut(s) 21, 210, 264, 721
Bsp13I TCCGGA 1 cut(s) 415
Bsp143I GATC 3 cut(s) 51, 284, 517
BspACI CCGC 7 cut(s) 21, 57, 122, 132, 179, 182, 215
BspANI GGCC 4 cut(s) 117, 227, 317, 797
BspCNI CTCAG 5 cut(s) 154, 273, 429, 481, 574
BspDI ATCGAT 1 cut(s) 520
BspEI TCCGGA 1 cut(s) 415
BspLI GGNNCC 2 cut(s) 18, 261
BsrDI GCAATG 1 cut(s) 12
BssECI CCNNGG 2 cut(s) 228, 312
BssMI GATC 3 cut(s) 51, 284, 517
BssT1I CCWWGG 2 cut(s) 228, 312
Bst2UI CCWGG 3 cut(s) 95, 458, 608
Bst4CI ACNGT 2 cut(s) 29, 195
Bst6I CTCTTC 1 cut(s) 114
BstC8I GCNNGC 5 cut(s) 21, 43, 119, 352, 473
BstDEI CTNAG 6 cut(s) 141, 281, 437, 489, 582, 825
BstF5I GGATG 3 cut(s) 405, 598, 734
BstH2I RGCGCY 1 cut(s) 221
BstHHI GCGC 1 cut(s) 220
BstKTI GATC 3 cut(s) 54, 287, 520
BstMAI GTCTC 1 cut(s) 344
BstMBI GATC 3 cut(s) 51, 284, 517
BstMCI CGRYCG 1 cut(s) 28
BstMWI GCNNNNNNNGC 3 cut(s) 187, 224, 759
BstNI CCWGG 3 cut(s) 95, 458, 608
BstNSI RCATGY 1 cut(s) 689
BstSCI CCNGG 4 cut(s) 93, 456, 606, 789
BstV1I GCAGC 4 cut(s) 196, 199, 390, 737
Bsu15I ATCGAT 1 cut(s) 520
BsuRI GGCC 4 cut(s) 117, 227, 317, 797
BsuTUI ATCGAT 1 cut(s) 520
BtsCI GGATG 3 cut(s) 405, 598, 734
Cac8I GCNNGC 5 cut(s) 21, 43, 119, 352, 473
CaiI CAGNNNCTG 3 cut(s) 148, 193, 638
CfoI GCGC 1 cut(s) 220
Cfr13I GGNCC 3 cut(s) 34, 115, 598
ClaI ATCGAT 1 cut(s) 520
CseI GACGC 1 cut(s) 146
Csp6I GTAC 1 cut(s) 787
CviAII CATG 3 cut(s) 332, 686, 705
CviQI GTAC 1 cut(s) 787
DdeI CTNAG 6 cut(s) 141, 281, 437, 489, 582, 825
DpnI GATC 3 cut(s) 53, 286, 519
DpnII GATC 3 cut(s) 51, 284, 517
DrdI GACNNNNNNGTC 1 cut(s) 32
DseDI GACNNNNNNGTC 1 cut(s) 32
EaeI YGGCCR 2 cut(s) 225, 795
Eam1104I CTCTTC 1 cut(s) 114
EarI CTCTTC 1 cut(s) 114
EciI GGCGGA 2 cut(s) 121, 168
Ecl136II GAGCTC 1 cut(s) 208
Eco130I CCWWGG 2 cut(s) 228, 312
Eco147I AGGCCT 1 cut(s) 317
Eco24I GRGCYC 4 cut(s) 21, 210, 264, 721
Eco47I GGWCC 2 cut(s) 34, 598
Eco53kI GAGCTC 1 cut(s) 208
Eco57I CTGAAG 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 208
EcoRII CCWGG 3 cut(s) 93, 456, 606
EcoT14I CCWWGG 2 cut(s) 228, 312
EcoT38I GRGCYC 4 cut(s) 21, 210, 264, 721
ErhI CCWWGG 2 cut(s) 228, 312
FaeI CATG 3 cut(s) 335, 689, 708
FaiI YATR 9 cut(s) 300, 333, 498, 590, 687, 706, 758, 819, 821
FatI CATG 3 cut(s) 331, 685, 704
FauI CCCGC 1 cut(s) 28
Fnu4HI GCNGC 8 cut(s) 57, 122, 182, 185, 188, 216, 379, 751
FokI GGATG 3 cut(s) 412, 605, 741
FriOI GRGCYC 4 cut(s) 21, 210, 264, 721
Fsp4HI GCNGC 8 cut(s) 57, 122, 182, 185, 188, 216, 379, 751
GlaI GCGC 1 cut(s) 219
GluI GCNGC 8 cut(s) 57, 122, 182, 185, 188, 216, 379, 751
GsaI CCCAGC 1 cut(s) 642
HaeII RGCGCY 1 cut(s) 221
HaeIII GGCC 4 cut(s) 117, 227, 317, 797
HapII CCGG 2 cut(s) 416, 790
HgaI GACGC 1 cut(s) 146
HhaI GCGC 1 cut(s) 220
Hin1II CATG 3 cut(s) 335, 689, 708
Hin6I GCGC 1 cut(s) 218
HinP1I GCGC 1 cut(s) 218
HincII GTYRAC 1 cut(s) 454
HindII GTYRAC 1 cut(s) 454
HinfI GANTC 4 cut(s) 128, 403, 623, 629
HpaI GTTAAC 1 cut(s) 454
HpaII CCGG 2 cut(s) 416, 790
Hpy166II GTNNAC 1 cut(s) 454
Hpy188I TCNGA 5 cut(s) 159, 271, 547, 628, 634
Hpy188III TCNNGA 3 cut(s) 49, 407, 416
Hpy8I GTNNAC 1 cut(s) 454
Hpy99I CGWCG 2 cut(s) 88, 140
HpyAV CCTTC 4 cut(s) 276, 368, 563, 611
HpyCH4III ACNGT 2 cut(s) 29, 195
HpyCH4IV ACGT 1 cut(s) 366
HpyCH4V TGCA 3 cut(s) 151, 525, 773
HpyF10VI GCNNNNNNNGC 3 cut(s) 187, 224, 759
HpyF3I CTNAG 6 cut(s) 141, 281, 437, 489, 582, 825
HpySE526I ACGT 1 cut(s) 366
Hsp92II CATG 3 cut(s) 335, 689, 708
HspAI GCGC 1 cut(s) 218
Kpn2I TCCGGA 1 cut(s) 415
KspAI GTTAAC 1 cut(s) 454
Kzo9I GATC 3 cut(s) 51, 284, 517
LmnI GCTCC 4 cut(s) 16, 205, 259, 745
Lsp1109I GCAGC 4 cut(s) 196, 199, 390, 737
LweI GCATC 1 cut(s) 512
MaeII ACGT 1 cut(s) 366
MaeIII GTNAC 3 cut(s) 73, 644, 764
MalI GATC 3 cut(s) 53, 286, 519
MboI GATC 3 cut(s) 51, 284, 517
MboII GAAGA 1 cut(s) 101
MhlI GDGCHC 4 cut(s) 21, 210, 264, 721
MlsI TGGCCA 2 cut(s) 227, 797
MluCI AATT 2 cut(s) 272, 538
MluNI TGGCCA 2 cut(s) 227, 797
MlyI GAGTC 1 cut(s) 122
Mox20I TGGCCA 2 cut(s) 227, 797
MroI TCCGGA 1 cut(s) 415
MscI TGGCCA 2 cut(s) 227, 797
MseI TTAA 1 cut(s) 453
Msp20I TGGCCA 2 cut(s) 227, 797
MspI CCGG 2 cut(s) 416, 790
MspR9I CCNGG 4 cut(s) 95, 458, 608, 791
Mva1269I GAATGC 2 cut(s) 151, 247
MvaI CCWGG 3 cut(s) 95, 458, 608
MwoI GCNNNNNNNGC 3 cut(s) 187, 224, 759
NciI CCSGG 1 cut(s) 791
NdeII GATC 3 cut(s) 51, 284, 517
NlaIII CATG 3 cut(s) 335, 689, 708
NlaIV GGNNCC 2 cut(s) 18, 261
NmuCI GTSAC 3 cut(s) 73, 644, 764
NspI RCATGY 1 cut(s) 689
PceI AGGCCT 1 cut(s) 317
PctI GAATGC 2 cut(s) 151, 247
PfeI GAWTC 3 cut(s) 403, 623, 629
PflMI CCANNNNNTGG 1 cut(s) 613
PkrI GCNGC 8 cut(s) 58, 123, 183, 186, 189, 217, 380, 752
PleI GAGTC 1 cut(s) 122
PpsI GAGTC 1 cut(s) 122
PsiI TTATAA 1 cut(s) 758
Psp124BI GAGCTC 1 cut(s) 210
Psp6I CCWGG 3 cut(s) 93, 456, 606
PspFI CCCAGC 1 cut(s) 638
PspGI CCWGG 3 cut(s) 93, 456, 606
PspN4I GGNNCC 2 cut(s) 18, 261
PspPI GGNCC 3 cut(s) 34, 115, 598
PstNI CAGNNNCTG 3 cut(s) 148, 193, 638
RsaI GTAC 1 cut(s) 788
RsaNI GTAC 1 cut(s) 787
SacI GAGCTC 1 cut(s) 210
SaqAI TTAA 1 cut(s) 453
SatI GCNGC 8 cut(s) 57, 122, 182, 185, 188, 216, 379, 751
Sau3AI GATC 3 cut(s) 51, 284, 517
Sau96I GGNCC 3 cut(s) 34, 115, 598
SchI GAGTC 1 cut(s) 122
ScrFI CCNGG 4 cut(s) 95, 458, 608, 791
SduI GDGCHC 4 cut(s) 21, 210, 264, 721
SfaNI GCATC 1 cut(s) 512
SinI GGWCC 2 cut(s) 34, 598
SmlI CTYRAG 1 cut(s) 663
SmoI CTYRAG 1 cut(s) 663
Sse9I AATT 2 cut(s) 272, 538
SseBI AGGCCT 1 cut(s) 317
SsiI CCGC 7 cut(s) 21, 57, 122, 132, 179, 182, 215
SstI GAGCTC 1 cut(s) 210
StuI AGGCCT 1 cut(s) 317
StyD4I CCNGG 4 cut(s) 93, 456, 606, 789
StyI CCWWGG 2 cut(s) 228, 312
TaaI ACNGT 2 cut(s) 29, 195
TaiI ACGT 1 cut(s) 369
TaqI TCGA 5 cut(s) 86, 164, 287, 467, 520
TasI AATT 2 cut(s) 272, 538
TauI GCSGC 4 cut(s) 59, 124, 184, 218
TfiI GAWTC 3 cut(s) 403, 623, 629
Tru1I TTAA 1 cut(s) 453
Tru9I TTAA 1 cut(s) 453
TseFI GTSAC 3 cut(s) 73, 644, 764
TseI GCWGC 4 cut(s) 184, 187, 378, 750
Tsp45I GTSAC 3 cut(s) 73, 644, 764
TspDTI ATGAA 2 cut(s) 254, 387
TspGWI ACGGA 1 cut(s) 398
Van91I CCANNNNNTGG 1 cut(s) 613
VpaK11BI GGWCC 2 cut(s) 34, 598
XapI RAATTY 1 cut(s) 272
XceI RCATGY 1 cut(s) 689
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.