Rh4DG279700

Histone-lysine N-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0002127
Physical Location & Seq
Reverse (-)
50079660 .. 50080118
459 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG279700.1

Sequence Viewer

Length: 339 bp
ATGCTCTCTCAGTGTAGGATAAATTGGATTGGTGGAGCCCCTTCGGAATTTGGTCTGAGATCGAGCAGAGCCTATGGAATTTATCGCAAGGCCTCGTTTTTCAACCATGATTGTCTCCCCCATGCGTGCCGATTTGATTATGCTGATGAAGGCAGCATAGAGATTATTTGCAAGGTTGAGGCGAATTGGTCTGACAATGAGGAGGAGCAAGGTGGTTCGGCTGAGATTATGGATGAGGACCAAGACCAGGAAATGGAAGGAGAATCGGAATCAGAAGCTGGGAGTGACATAGAATTCCAAATGCTGGGGCACGCTAGTGCCTTTGCCCCTGAAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SET

Protein Analysis

112

Amino Acids

12.53

Weight (kDa)

4.25

Isoelectric Point (pI)

64.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 253, 304
AcsI RAATTY 3 cut(s) 47, 78, 293
AfiI CCNNNNNNNGG 3 cut(s) 247, 253, 304
AgsI TTSAA 1 cut(s) 103
AjnI CCWGG 1 cut(s) 246
AleI CACNNNNGTG 1 cut(s) 315
AluBI AGCT 1 cut(s) 278
AluI AGCT 1 cut(s) 278
Alw26I GTCTC 1 cut(s) 119
AlwNI CAGNNNCTG 1 cut(s) 278
AoxI GGCC 1 cut(s) 90
ApeKI GCWGC 1 cut(s) 153
ApoI RAATTY 3 cut(s) 47, 78, 293
AspS9I GGNCC 1 cut(s) 238
AvaII GGWCC 1 cut(s) 238
BaeGI GKGCMC 1 cut(s) 312
BanII GRGCYC 1 cut(s) 40
BbvI GCAGC 1 cut(s) 165
BciT130I CCWGG 1 cut(s) 248
BcoDI GTCTC 1 cut(s) 119
BfaI CTAG 1 cut(s) 315
BisI GCNGC 1 cut(s) 154
BlsI GCNGC 1 cut(s) 155
Bme1390I CCNGG 1 cut(s) 248
Bme18I GGWCC 1 cut(s) 238
BmgT120I GGNCC 1 cut(s) 238
BmiI GGNNCC 1 cut(s) 37
BmrFI CCNGG 1 cut(s) 248
Bsc4I CCNNNNNNNGG 3 cut(s) 247, 253, 304
BseBI CCWGG 1 cut(s) 248
BseGI GGATG 1 cut(s) 238
BseLI CCNNNNNNNGG 3 cut(s) 247, 253, 304
BseMII CTCAG 3 cut(s) 23, 47, 213
BseRI GAGGAG 2 cut(s) 215, 218
BseSI GKGCMC 1 cut(s) 312
BseXI GCAGC 1 cut(s) 165
BseYI CCCAGC 2 cut(s) 278, 304
BshFI GGCC 1 cut(s) 92
BslI CCNNNNNNNGG 3 cut(s) 247, 253, 304
BsmAI GTCTC 1 cut(s) 119
BsnI GGCC 1 cut(s) 92
Bsp1286I GDGCHC 2 cut(s) 40, 312
Bsp143I GATC 1 cut(s) 59
BspANI GGCC 1 cut(s) 92
BspCNI CTCAG 3 cut(s) 22, 48, 214
BspLI GGNNCC 1 cut(s) 37
BssMI GATC 1 cut(s) 59
Bst2UI CCWGG 1 cut(s) 248
BstC8I GCNNGC 2 cut(s) 127, 312
BstDEI CTNAG 3 cut(s) 9, 56, 222
BstF5I GGATG 1 cut(s) 238
BstKTI GATC 1 cut(s) 62
BstMAI GTCTC 1 cut(s) 119
BstMBI GATC 1 cut(s) 59
BstNI CCWGG 1 cut(s) 248
BstSCI CCNGG 1 cut(s) 246
BstSLI GKGCMC 1 cut(s) 312
BstV1I GCAGC 1 cut(s) 165
BsuRI GGCC 1 cut(s) 92
BtsCI GGATG 1 cut(s) 238
BtsIMutI CAGTG 1 cut(s) 17
Cac8I GCNNGC 2 cut(s) 127, 312
CaiI CAGNNNCTG 1 cut(s) 278
Cfr13I GGNCC 1 cut(s) 238
CviAII CATG 2 cut(s) 107, 122
CviJI RGCY 5 cut(s) 38, 71, 92, 221, 278
CviKI_1 RGCY 5 cut(s) 38, 71, 92, 221, 278
DdeI CTNAG 3 cut(s) 9, 56, 222
DpnI GATC 1 cut(s) 61
DpnII GATC 1 cut(s) 59
Eco147I AGGCCT 1 cut(s) 92
Eco24I GRGCYC 1 cut(s) 40
Eco47I GGWCC 1 cut(s) 238
EcoRI GAATTC 1 cut(s) 293
EcoRII CCWGG 1 cut(s) 246
EcoT38I GRGCYC 1 cut(s) 40
FaeI CATG 2 cut(s) 110, 125
FaiI YATR 7 cut(s) 75, 108, 123, 141, 158, 230, 290
FatI CATG 2 cut(s) 106, 121
Fnu4HI GCNGC 1 cut(s) 154
FokI GGATG 1 cut(s) 245
FriOI GRGCYC 1 cut(s) 40
Fsp4HI GCNGC 1 cut(s) 154
FspBI CTAG 1 cut(s) 315
GluI GCNGC 1 cut(s) 154
GsaI CCCAGC 2 cut(s) 282, 308
HaeIII GGCC 1 cut(s) 92
Hin1II CATG 2 cut(s) 110, 125
HinfI GANTC 2 cut(s) 263, 269
Hpy188I TCNGA 5 cut(s) 46, 57, 193, 268, 274
HpyAV CCTTC 3 cut(s) 51, 143, 251
HpyCH4V TGCA 1 cut(s) 171
HpyF3I CTNAG 3 cut(s) 9, 56, 222
Hsp92II CATG 2 cut(s) 110, 125
Kzo9I GATC 1 cut(s) 59
LmnI GCTCC 2 cut(s) 35, 205
LpnPI CCDG 4 cut(s) 233, 260, 264, 290
Lsp1109I GCAGC 1 cut(s) 165
MaeI CTAG 1 cut(s) 315
MaeIII GTNAC 1 cut(s) 284
MalI GATC 1 cut(s) 61
MboI GATC 1 cut(s) 59
MhlI GDGCHC 2 cut(s) 40, 312
MluCI AATT 5 cut(s) 22, 47, 78, 184, 293
MnlI CCTC 5 cut(s) 103, 172, 193, 196, 229
MslI CAYNNNNRTG 1 cut(s) 315
MspR9I CCNGG 1 cut(s) 248
MvaI CCWGG 1 cut(s) 248
NdeII GATC 1 cut(s) 59
NlaIII CATG 2 cut(s) 110, 125
NlaIV GGNNCC 1 cut(s) 37
NmuCI GTSAC 1 cut(s) 284
OliI CACNNNNGTG 1 cut(s) 315
PceI AGGCCT 1 cut(s) 92
PfeI GAWTC 2 cut(s) 263, 269
PflMI CCANNNNNTGG 2 cut(s) 253, 304
PkrI GCNGC 1 cut(s) 155
Psp6I CCWGG 1 cut(s) 246
PspFI CCCAGC 2 cut(s) 278, 304
PspGI CCWGG 1 cut(s) 246
PspN4I GGNNCC 1 cut(s) 37
PspPI GGNCC 1 cut(s) 238
PstNI CAGNNNCTG 1 cut(s) 278
RseI CAYNNNNRTG 1 cut(s) 315
SatI GCNGC 1 cut(s) 154
Sau3AI GATC 1 cut(s) 59
Sau96I GGNCC 1 cut(s) 238
ScrFI CCNGG 1 cut(s) 248
SduI GDGCHC 2 cut(s) 40, 312
SetI ASST 3 cut(s) 177, 214, 280
SinI GGWCC 1 cut(s) 238
SmiMI CAYNNNNRTG 1 cut(s) 315
Sse9I AATT 5 cut(s) 22, 47, 78, 184, 293
SseBI AGGCCT 1 cut(s) 92
SspMI CTAG 1 cut(s) 315
StuI AGGCCT 1 cut(s) 92
StyD4I CCNGG 1 cut(s) 246
TaqI TCGA 1 cut(s) 62
TasI AATT 5 cut(s) 22, 47, 78, 184, 293
TfiI GAWTC 2 cut(s) 263, 269
TscAI CASTG 1 cut(s) 17
TseFI GTSAC 1 cut(s) 284
TseI GCWGC 1 cut(s) 153
Tsp45I GTSAC 1 cut(s) 284
TspDTI ATGAA 1 cut(s) 162
TspRI CASTG 1 cut(s) 17
Van91I CCANNNNNTGG 2 cut(s) 253, 304
VpaK11BI GGWCC 1 cut(s) 238
XapI RAATTY 3 cut(s) 47, 78, 293
XspI CTAG 1 cut(s) 315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.