Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002127

Physical Location & Seq

Genomic Coordinates Reverse (-)

38448105 .. 38452857

Gene Structure 4753 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0224100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGGGTTTCTGCTCAAGTTCCACAGTAGCACGGGATGTGATGGATACAGTTTGTCTGAAGAAGAGCAATGAGAAGCCAAATCAGAAGGTGAGTGAGAGCAAGAAGATAAGAGGAACAGTGGTGTTGATGAAGAAGAACGTGTTGGACTTCAACGACATGAAGGCATCGCTTTTTGATCGAATCCATGAGTTTCTGGGCAAGGGTGTTTCCATGCAGCTCATCAGTGCTACTCAACCTGAGCCTGCAGAAAATGGGTTGATGTCGAGAGGGAAGATTGGAAAGATAGCTTACTTGGAGAACTGGATTAAAACCCTTACATCCTTAAGCTTGACTGCTGGAGATACTGCTTTCACCGCTTCAATTGACTGGGATGAGTCAATGGGAGTTCCTGGGGCTTTGATGATCAGAAACCATCACCATAGCCAATTTTACCTCAAGAGGATTACATTAGATGATGTTCCTGGACACGGTCGAGTCCATTTTGTCTGCAATTCCTGGGTTTACCCTGCACATCGTTACAATTATAATCGGATATTTTTCTCCAACAAGGCCTACCTGCCATCTCAAACACCTGAGCTGTTACTCCCTTACAGGGAAGAAGAGCTGAGTAATCTCCGTGGAAGTGGATCAGGCGAGCTAAAGGAGTGGGACAGAGTCTATGACTATGCTTACTACAATGATTTGGGAAGTCCAGACAAGGGTCCAGAATATGCACGCCCTGTTCTTGGTGGATCACAAGAGTATCCCTATCCAAGAAGAGGAAGAACTGGTCGAAAACCAACTAAAACTGACCCCAACTCTGAGAGCAGGCTGTTTCTTCTAAGTCTAGACATCTATGTTCCAAGAGATGAGCGCTTTGGCCACGTGAAGTTTTCAGATTTTCTTGCATATGCCCTAAAATCCCTGGTTCAGATATTGCTCCCAGAGCTTAGATCTCTGTGTGATAAAACTATCGATGAGTTTGACACGTTTGAGGATGTACTTGATCTCTATGAAGGAGGCATCAAGCTACCAAATGGGCCTACGCTCAAAAAATTAAGGGATCGTGTCCCTTGGGAGCTTCTCAGGGAACTACTTCGCTCAGATGGCGAGCGATTTCTCAAGTTCCCAATGCCTGATGTGATTAAAGAGGATAAATGTGCATGGAGGACGGATGAAGAGTTTGCAAGAGAAATGCTGGCAGGGGTTAACCCTGTTAACATCACTCGCCTTCAAGAATTTCCCCCAACCAGCAAGCTAGACCCTAAAGTATATGGGAATCAGAACAGTTCAATACGAAAAGAACAGATAGAAAAGAACATGAATGGCCTCAGTGTTGAAGAAGCAATTAAAAGCAACAGACTTTTCATATTAGATCATCATGATGCATTAATGACATACCTGAGACGAATAAACACAACAACGACAAAGACCTATGCCACCAGAACTTTCCTCTTGCTACAAGAAGATGGGACATTGAAGCCTTTGGCAATTGAGTTAAGCCTTCCACATCCACAAGGGGAGCATCATGGTGCTGTCAGCAAAGTTTTCACTCCAGCAGAAGATGGCATCGAGGCTTCAGTTTGGCAGCTGGCCAAAGCTTACGCTGCTGTAAATGATTCTGGCTATCATCAACTTATCAGCCACTGGTTAAACACCCATGCTGTAATAGAGCCATTTATAATTGCAACAAATAGACAGTTGAGTGTGCTTCACCCGATACATAAGCTTCTGCAACCACACTTCCGGGACACGATGAACATAAATGCCCTGGCCAGGCAAATCCTAATCAATGCTGGAGGGGTGCTTGAGAAGACAGTCTTCCCAGCTAAATATGCCATGGAAATGTCTGCTGTTATTTATAAAAACTGGGTATTCACCGAGCAAGCACTACCTGCTGACTTGCTCAAGAGGGGAATGGCAATTTCGGACCCAAGCAGCCCTCATGGCCTCAGACTTCTGATAGAAGATTACCCCTTTGCTGTTGATGGGCTGGAAATATGGTCTGCCATTGAAACTTGGGTCACTGAATATTGCACTTTCTACTATCCAACAGATAACGTGGTCGAAAGTGATTCTGAACTCCAGAAATGGTGGGAAGAGCTTCGCAATGAAGGCCATGGTGACAAGAGGGATGAACCATGGTGGCCAGAGATGCAAACTAGAGCCGAACTTATCCAATCATGCACCATAATCATATGGATAGCTTCTGCCCTCCATGCTGCTGTGAATTTTGGGCAGTGGCCTTATGCTGGCTACCTCCCAAATCGCCCAACAATAAGCCGCCGATTCATGCCTGAGCCAGGCACTGCTGAATATGATGAACTTGAGACAAACCCTGATGTGGCCTTCCTGAAAACAATTACATCCCAGCTCCAAACTCTTCTTGGCGTATCTCTGATAGAGATTTTATCACGACATTCAACTGATGAGATTTATCTTGGACAAAGAGATACTCTTGAGTGGACTTCAGATGGTGAGGCACTAGCAGCATTTGATAGATTCGGAAAGAAGCTGATAGAAATTGAGAACAGAATTACAGAAATGAACGAGGATGAGAGATGGAAGAACAGAGTTGGGCCCGTCAAGATGCCTTATACCTTGCTCTATCCCAGCACCTCAGATTACTCTAGAGAGGGTGGACTCACCGGAAAGGGAATTCCCAACAGTGTCTCAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SET

Protein Analysis

886

Amino Acids

101.05

Weight (kDa)

5.83

Isoelectric Point (pI)

44.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	86 - 180	3.3e-17	PLAT/LH2 domain
Lipoxygenase	PF00305	195 - 864	0.0	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002127)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19640 AT2G19640
fragaria_vesca	FvH4_2g26270 FvH4_4g22020
malus_domestica	MD11G1163300.v1.1 MD13G1134900.v1.1 MD16G1130700.v1.1
prunus_persica	Prupe.1G210500_v2.0.a1
pyrus_communis	pycom13g11770 pycom16g11520
rosa_chinensis	RchiOBHm_Chr4g0427831 RchiOBHm_Chr4g0427841 RchiOBHm_Chr4g0428221
rosa_laevigata	RLG00000007168 RLG00000007208
rosa_multiflora	Rmu_sc0000066.1_g000029 Rmu_sc0004940.1_g000002 Rmu_sc0009599.1_g000001
rosa_roxburghii	Rroxscaffold_5G00367650 Rroxscaffold_5G00369470 Rroxscaffold_5G00369480
rosa_rugosa	Rorug04G0223900 Rorug04G0224000 Rorug04G0224100 Rorug04G0224200 Rorug04G0224300 Rorug04G0224300
rosa_samantha	Rh4AG276800 Rh4AG276900 Rh4AG281000 Rh4BG282400 Rh4BG282500 Rh4BG282600 Rh4BG286500 Rh4CG298100 Rh4CG301600 Rh4CG302200 Rh4DG279700 Rh4DG279800 Rh4DG283600
rosa_wichuraiana	Rw0G010800 Rw0G010820 Rw0G020420 Rw4G024410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	525, 1661, 1842
Acc36I	ACCTGC	2 cut(s)	564, 1882
AciI	CCGC	2 cut(s)	354, 2263
AclWI	GGATC	3 cut(s)	634, 739, 1050
AcoI	YGGCCR	4 cut(s)	859, 1572, 1752, 2126
AcsI	RAATTY	3 cut(s)	1217, 2209, 2637
AcuI	CTGAAG	3 cut(s)	77, 1542, 2433
AcvI	CACGTG	1 cut(s)	865
AfaI	GTAC	1 cut(s)	981
AfeI	AGCGCT	1 cut(s)	854
AfiI	CCNNNNNNNGG	9 cut(s)	467, 592, 698, 725, 758, 1755, 2231, 2282, 2323
AflII	CTTAAG	1 cut(s)	322
AflIII	ACRYGT	2 cut(s)	138, 966
AgsI	TTSAA	8 cut(s)	151, 360, 1214, 1272, 1319, 1459, 1994, 2403
AjnI	CCWGG	7 cut(s)	388, 460, 494, 903, 1749, 1754, 2281
AjuI	GAANNNNNNNTTGG	2 cut(s)	125, 157
Alw26I	GTCTC	3 cut(s)	1378, 2303, 2656
AlwI	GGATC	3 cut(s)	634, 739, 1050
AlwNI	CAGNNNCTG	2 cut(s)	1626, 2288
Aor51HI	AGCGCT	1 cut(s)	854
ApaI	GGGCCC	1 cut(s)	2562
ApeKI	GCWGC	6 cut(s)	214, 1567, 1586, 1917, 2201, 2468
ApoI	RAATTY	3 cut(s)	1217, 2209, 2637
AseI	ATTAAT	1 cut(s)	1370
Asp700I	GAANNNNTTC	2 cut(s)	1074, 2082
AspLEI	GCGC	1 cut(s)	855
AspS9I	GGNCC	5 cut(s)	701, 1019, 1909, 2558, 2559
AsuC2I	CCSGG	1 cut(s)	1727
AsuHPI	GGTGA	8 cut(s)	100, 343, 407, 1685, 1849, 2114, 2468, 2617
AvaII	GGWCC	2 cut(s)	701, 1909
BaeGI	GKGCMC	1 cut(s)	2562
BaeI	ACNNNNGTAYC	2 cut(s)	725, 758
BalI	TGGCCA	4 cut(s)	861, 1574, 1754, 2128
BanII	GRGCYC	1 cut(s)	2562
BbrPI	CACGTG	1 cut(s)	865
BbsI	GAAGAC	2 cut(s)	1792, 1799
BbvI	GCAGC	6 cut(s)	226, 1573, 1579, 1929, 2188, 2480
BccI	CCATC	9 cut(s)	34, 420, 568, 1079, 1442, 1538, 1961, 2447, 2535
BciT130I	CCWGG	7 cut(s)	390, 462, 496, 905, 1751, 1756, 2283
BciVI	GTATCC	2 cut(s)	37, 753
BclI	TGATCA	1 cut(s)	402
BcnI	CCSGG	1 cut(s)	1727
BcoDI	GTCTC	3 cut(s)	1378, 2303, 2656
BfaI	CTAG	5 cut(s)	827, 1238, 2142, 2465, 2610
BfmI	CTRYAG	1 cut(s)	243
BfoI	RGCGCY	1 cut(s)	856
BfrI	CTTAAG	1 cut(s)	322
BfuAI	ACCTGC	2 cut(s)	564, 1882
BfuI	GTATCC	2 cut(s)	37, 753
BglI	GCCNNNNNGGC	1 cut(s)	1926
BglII	AGATCT	1 cut(s)	932
BisI	GCNGC	7 cut(s)	215, 1568, 1587, 1918, 2202, 2263, 2469
BlsI	GCNGC	7 cut(s)	216, 1569, 1588, 1919, 2203, 2264, 2470
Bme1390I	CCNGG	8 cut(s)	390, 462, 496, 905, 1727, 1751, 1756, 2283
Bme18I	GGWCC	2 cut(s)	701, 1909
BmgT120I	GGNCC	5 cut(s)	701, 1019, 1909, 2558, 2559
BmiI	GGNNCC	3 cut(s)	702, 1911, 2560
BmrFI	CCNGG	8 cut(s)	390, 462, 496, 905, 1727, 1751, 1756, 2283
BmrI	ACTGGG	2 cut(s)	376, 1858
BmsI	GCATC	7 cut(s)	173, 1011, 1354, 1513, 1557, 2124, 2559
BmuI	ACTGGG	2 cut(s)	376, 1858
BoxI	GACNNNNGTC	1 cut(s)	699
BpiI	GAAGAC	2 cut(s)	1792, 1799
BpmI	CTGGAG	4 cut(s)	357, 1518, 1797, 2048
Bpu10I	CCTNAGC	3 cut(s)	237, 573, 2277
BpuEI	CTTGAG	6 cut(s)	419, 1085, 1808, 1871, 2327, 2459
BpuMI	CCSGG	1 cut(s)	1727
Bsa29I	ATCGAT	1 cut(s)	954
BsaAI	YACGTR	1 cut(s)	865
BsaJI	CCNNGG	9 cut(s)	389, 495, 616, 903, 1052, 1749, 1818, 2098, 2120
BsaWI	WCCGGW	1 cut(s)	2627
Bsc4I	CCNNNNNNNGG	9 cut(s)	467, 592, 698, 725, 758, 1755, 2231, 2282, 2323
Bse1I	ACTGG	5 cut(s)	305, 371, 772, 1631, 1853
Bse3DI	GCAATG	2 cut(s)	73, 2095
BseBI	CCWGG	7 cut(s)	390, 462, 496, 905, 1751, 1756, 2283
BseCI	ATCGAT	1 cut(s)	954
BseDI	CCNNGG	9 cut(s)	389, 495, 616, 903, 1052, 1749, 1818, 2098, 2120
BseGI	GGATG	9 cut(s)	40, 317, 376, 982, 1159, 1489, 2119, 2345, 2539
BseLI	CCNNNNNNNGG	9 cut(s)	467, 592, 698, 725, 758, 1755, 2231, 2282, 2323
BseMI	GCAATG	2 cut(s)	73, 2095
BseNI	ACTGG	5 cut(s)	305, 371, 772, 1631, 1853
BseSI	GKGCMC	1 cut(s)	2562
BseXI	GCAGC	6 cut(s)	226, 1573, 1579, 1929, 2188, 2480
BseYI	CCCAGC	3 cut(s)	1804, 2349, 2591
BsgI	GTGCAG	1 cut(s)	492
Bsh1285I	CGRYCG	1 cut(s)	472
BshVI	ATCGAT	1 cut(s)	954
BsiEI	CGRYCG	1 cut(s)	472
BsiSI	CCGG	2 cut(s)	1726, 2628
BslFI	GGGAC	4 cut(s)	662, 1034, 1465, 1742
BslI	CCNNNNNNNGG	9 cut(s)	467, 592, 698, 725, 758, 1755, 2231, 2282, 2323
BsmAI	GTCTC	3 cut(s)	1378, 2303, 2656
BsmBI	CGTCTC	1 cut(s)	1378
BsmFI	GGGAC	4 cut(s)	662, 1034, 1465, 1742
Bsp120I	GGGCCC	1 cut(s)	2558
Bsp1286I	GDGCHC	1 cut(s)	2562
Bsp143I	GATC	8 cut(s)	175, 402, 626, 731, 932, 985, 1042, 1354
Bsp19I	CCATGG	3 cut(s)	1818, 2098, 2120
BspACI	CCGC	2 cut(s)	354, 2263
BspDI	ATCGAT	1 cut(s)	954
BspHI	TCATGA	1 cut(s)	1360
BspLI	GGNNCC	3 cut(s)	702, 1911, 2560
BspMAI	CTGCAG	1 cut(s)	247
BspMI	ACCTGC	2 cut(s)	564, 1882
BspPI	GGATC	3 cut(s)	634, 739, 1050
BspQI	GCTCTTC	3 cut(s)	56, 594, 2073
BspTI	CTTAAG	1 cut(s)	322
BsrDI	GCAATG	2 cut(s)	73, 2095
BsrI	ACTGG	5 cut(s)	305, 371, 772, 1631, 1853
BssECI	CCNNGG	9 cut(s)	389, 495, 616, 903, 1052, 1749, 1818, 2098, 2120
BssMI	GATC	8 cut(s)	175, 402, 626, 731, 932, 985, 1042, 1354
BssT1I	CCWWGG	4 cut(s)	1052, 1818, 2098, 2120
Bst2UI	CCWGG	7 cut(s)	390, 462, 496, 905, 1751, 1756, 2283
Bst4CI	ACNGT	8 cut(s)	25, 49, 118, 470, 1268, 1680, 1798, 2648
Bst6I	CTCTTC	6 cut(s)	56, 594, 751, 1152, 2073, 2367
BstAFI	CTTAAG	1 cut(s)	322
BstAPI	GCANNNNNTGC	1 cut(s)	1874
BstBAI	YACGTR	1 cut(s)	865
BstDSI	CCRYGG	4 cut(s)	616, 1818, 2098, 2120
BstENI	CCTNNNNNAGG	1 cut(s)	2280
BstF5I	GGATG	9 cut(s)	40, 317, 376, 982, 1159, 1489, 2119, 2345, 2539
BstH2I	RGCGCY	1 cut(s)	856
BstHHI	GCGC	1 cut(s)	855
BstKTI	GATC	8 cut(s)	178, 405, 629, 734, 935, 988, 1045, 1357
BstMAI	GTCTC	3 cut(s)	1378, 2303, 2656
BstMBI	GATC	8 cut(s)	175, 402, 626, 731, 932, 985, 1042, 1354
BstMCI	CGRYCG	1 cut(s)	472
BstNI	CCWGG	7 cut(s)	390, 462, 496, 905, 1751, 1756, 2283
BstPAI	GACNNNNGTC	1 cut(s)	699
BstSCI	CCNGG	8 cut(s)	388, 460, 494, 903, 1725, 1749, 1754, 2281
BstSFI	CTRYAG	1 cut(s)	243
BstSLI	GKGCMC	1 cut(s)	2562
BstV1I	GCAGC	6 cut(s)	226, 1573, 1579, 1929, 2188, 2480
BstV2I	GAAGAC	2 cut(s)	1792, 1799
BstX2I	RGATCY	1 cut(s)	932
BstYI	RGATCY	1 cut(s)	932
Bsu15I	ATCGAT	1 cut(s)	954
BsuI	GTATCC	2 cut(s)	37, 753
BsuTUI	ATCGAT	1 cut(s)	954
BtgI	CCRYGG	4 cut(s)	616, 1818, 2098, 2120
BtgZI	GCGATG	1 cut(s)	150
BtsCI	GGATG	9 cut(s)	40, 317, 376, 982, 1159, 1489, 2119, 2345, 2539
BtsI	GCAGTG	2 cut(s)	2225, 2286
BtsIMutI	CAGTG	8 cut(s)	123, 229, 1318, 1624, 2004, 2225, 2286, 2653
BveI	ACCTGC	2 cut(s)	564, 1882
CaiI	CAGNNNCTG	2 cut(s)	1626, 2288
CciI	TCATGA	1 cut(s)	1360
CfoI	GCGC	1 cut(s)	855
Cfr13I	GGNCC	5 cut(s)	701, 1019, 1909, 2558, 2559
ClaI	ATCGAT	1 cut(s)	954
Csp6I	GTAC	1 cut(s)	980
CviQI	GTAC	1 cut(s)	980
DpnI	GATC	8 cut(s)	177, 404, 628, 733, 934, 987, 1044, 1356
DpnII	GATC	8 cut(s)	175, 402, 626, 731, 932, 985, 1042, 1354
EaeI	YGGCCR	4 cut(s)	859, 1572, 1752, 2126
Eam1104I	CTCTTC	6 cut(s)	56, 594, 751, 1152, 2073, 2367
EarI	CTCTTC	6 cut(s)	56, 594, 751, 1152, 2073, 2367
Eco130I	CCWWGG	4 cut(s)	1052, 1818, 2098, 2120
Eco147I	AGGCCT	1 cut(s)	551
Eco24I	GRGCYC	1 cut(s)	2562
Eco47I	GGWCC	2 cut(s)	701, 1909
Eco47III	AGCGCT	1 cut(s)	854
Eco57I	CTGAAG	3 cut(s)	77, 1542, 2433
Eco72I	CACGTG	1 cut(s)	865
EcoNI	CCTNNNNNAGG	1 cut(s)	2280
EcoRI	GAATTC	1 cut(s)	2637
EcoRII	CCWGG	7 cut(s)	388, 460, 494, 903, 1749, 1754, 2281
EcoT14I	CCWWGG	4 cut(s)	1052, 1818, 2098, 2120
EcoT22I	ATGCAT	1 cut(s)	1369
EcoT38I	GRGCYC	1 cut(s)	2562
ErhI	CCWWGG	4 cut(s)	1052, 1818, 2098, 2120
Esp3I	CGTCTC	1 cut(s)	1378
FalI	AAGNNNNNCTT	2 cut(s)	1784, 1816
FaqI	GGGAC	4 cut(s)	662, 1034, 1465, 1742
FauNDI	CATATG	2 cut(s)	889, 2177
FbaI	TGATCA	1 cut(s)	402
Fnu4HI	GCNGC	7 cut(s)	215, 1568, 1587, 1918, 2202, 2263, 2469
FokI	GGATG	9 cut(s)	47, 304, 383, 989, 1166, 1476, 2126, 2332, 2546
FriOI	GRGCYC	1 cut(s)	2562
Fsp4HI	GCNGC	7 cut(s)	215, 1568, 1587, 1918, 2202, 2263, 2469
FspBI	CTAG	5 cut(s)	827, 1238, 2142, 2465, 2610
GlaI	GCGC	1 cut(s)	854
GluI	GCNGC	7 cut(s)	215, 1568, 1587, 1918, 2202, 2263, 2469
GsaI	CCCAGC	3 cut(s)	1808, 2353, 2595
GsuI	CTGGAG	4 cut(s)	357, 1518, 1797, 2048
HaeII	RGCGCY	1 cut(s)	856
HapII	CCGG	2 cut(s)	1726, 2628
HhaI	GCGC	1 cut(s)	855
Hin6I	GCGC	1 cut(s)	853
HinP1I	GCGC	1 cut(s)	853
HincII	GTYRAC	2 cut(s)	1189, 1198
HindII	GTYRAC	2 cut(s)	1189, 1198
HindIII	AAGCTT	3 cut(s)	325, 1578, 1706
HpaI	GTTAAC	2 cut(s)	1189, 1198
HpaII	CCGG	2 cut(s)	1726, 2628
HphI	GGTGA	8 cut(s)	100, 343, 407, 1685, 1849, 2114, 2468, 2617
Hpy166II	GTNNAC	5 cut(s)	502, 1189, 1198, 2445, 2621
Hpy8I	GTNNAC	5 cut(s)	502, 1189, 1198, 2445, 2621
HpyAV	CCTTC	7 cut(s)	79, 154, 989, 1220, 1493, 2087, 2338
HpyCH4III	ACNGT	8 cut(s)	25, 49, 118, 470, 1268, 1680, 1798, 2648
HpyCH4IV	ACGT	4 cut(s)	138, 864, 968, 2040
HpySE526I	ACGT	4 cut(s)	138, 864, 968, 2040
HspAI	GCGC	1 cut(s)	853
Ksp22I	TGATCA	1 cut(s)	402
KspAI	GTTAAC	2 cut(s)	1189, 1198
Kzo9I	GATC	8 cut(s)	175, 402, 626, 731, 932, 985, 1042, 1354
LguI	GCTCTTC	3 cut(s)	56, 594, 2073
LmnI	GCTCC	4 cut(s)	924, 1057, 1501, 2358
Lsp1109I	GCAGC	6 cut(s)	226, 1573, 1579, 1929, 2188, 2480
LweI	GCATC	7 cut(s)	173, 1011, 1354, 1513, 1557, 2124, 2559
MaeI	CTAG	5 cut(s)	827, 1238, 2142, 2465, 2610
MaeII	ACGT	4 cut(s)	138, 864, 968, 2040
MaeIII	GTNAC	4 cut(s)	515, 579, 2002, 2102
MalI	GATC	8 cut(s)	177, 404, 628, 733, 934, 987, 1044, 1356
MboI	GATC	8 cut(s)	175, 402, 626, 731, 932, 985, 1042, 1354
MfeI	CAATTG	2 cut(s)	360, 1470
MflI	RGATCY	1 cut(s)	932
MhlI	GDGCHC	1 cut(s)	2562
MlsI	TGGCCA	4 cut(s)	861, 1574, 1754, 2128
MluNI	TGGCCA	4 cut(s)	861, 1574, 1754, 2128
MlyI	GAGTC	4 cut(s)	383, 483, 663, 2616
MmeI	TCCRAC	3 cut(s)	123, 567, 2054
Mox20I	TGGCCA	4 cut(s)	861, 1574, 1754, 2128
Mph1103I	ATGCAT	1 cut(s)	1369
MroXI	GAANNNNTTC	2 cut(s)	1074, 2082
MscI	TGGCCA	4 cut(s)	861, 1574, 1754, 2128
MslI	CAYNNNNRTG	3 cut(s)	1362, 1509, 1823
Msp20I	TGGCCA	4 cut(s)	861, 1574, 1754, 2128
MspA1I	CMGCKG	1 cut(s)	1570
MspCI	CTTAAG	1 cut(s)	322
MspI	CCGG	2 cut(s)	1726, 2628
MspR9I	CCNGG	8 cut(s)	390, 462, 496, 905, 1727, 1751, 1756, 2283
MunI	CAATTG	2 cut(s)	360, 1470
MvaI	CCWGG	7 cut(s)	390, 462, 496, 905, 1751, 1756, 2283
NciI	CCSGG	1 cut(s)	1727
NcoI	CCATGG	3 cut(s)	1818, 2098, 2120
NdeI	CATATG	2 cut(s)	889, 2177
NdeII	GATC	8 cut(s)	175, 402, 626, 731, 932, 985, 1042, 1354
NlaIV	GGNNCC	3 cut(s)	702, 1911, 2560
NmuCI	GTSAC	2 cut(s)	2002, 2102
NsiI	ATGCAT	1 cut(s)	1369
PagI	TCATGA	1 cut(s)	1360
PceI	AGGCCT	1 cut(s)	551
PciSI	GCTCTTC	3 cut(s)	56, 594, 2073
PdmI	GAANNNNTTC	2 cut(s)	1074, 2082
PfeI	GAWTC	6 cut(s)	180, 1258, 1598, 2054, 2268, 2481
PflFI	GACNNNGTC	2 cut(s)	468, 653
PfoI	TCCNGGA	2 cut(s)	460, 1725
PkrI	GCNGC	7 cut(s)	216, 1569, 1588, 1919, 2203, 2264, 2470
PleI	GAGTC	4 cut(s)	382, 482, 662, 2616
PmaCI	CACGTG	1 cut(s)	865
PmlI	CACGTG	1 cut(s)	865
PpsI	GAGTC	4 cut(s)	382, 482, 662, 2616
Ppu21I	YACGTR	1 cut(s)	865
PshAI	GACNNNNGTC	1 cut(s)	699
PshBI	ATTAAT	1 cut(s)	1370
PsiI	TTATAA	3 cut(s)	525, 1661, 1842
Psp6I	CCWGG	7 cut(s)	388, 460, 494, 903, 1749, 1754, 2281
PspCI	CACGTG	1 cut(s)	865
PspFI	CCCAGC	3 cut(s)	1804, 2349, 2591
PspGI	CCWGG	7 cut(s)	388, 460, 494, 903, 1749, 1754, 2281
PspN4I	GGNNCC	3 cut(s)	702, 1911, 2560
PspOMI	GGGCCC	1 cut(s)	2558
PspPI	GGNCC	5 cut(s)	701, 1019, 1909, 2558, 2559
PstI	CTGCAG	1 cut(s)	247
PstNI	CAGNNNCTG	2 cut(s)	1626, 2288
PsuI	RGATCY	1 cut(s)	932
PsyI	GACNNNGTC	2 cut(s)	468, 653
PvuII	CAGCTG	1 cut(s)	1570
RsaI	GTAC	1 cut(s)	981
RsaNI	GTAC	1 cut(s)	980
RseI	CAYNNNNRTG	3 cut(s)	1362, 1509, 1823
SapI	GCTCTTC	3 cut(s)	56, 594, 2073
SatI	GCNGC	7 cut(s)	215, 1568, 1587, 1918, 2202, 2263, 2469
Sau3AI	GATC	8 cut(s)	175, 402, 626, 731, 932, 985, 1042, 1354
Sau96I	GGNCC	5 cut(s)	701, 1019, 1909, 2558, 2559
SchI	GAGTC	4 cut(s)	383, 483, 663, 2616
ScrFI	CCNGG	8 cut(s)	390, 462, 496, 905, 1727, 1751, 1756, 2283
SduI	GDGCHC	1 cut(s)	2562
SfaNI	GCATC	7 cut(s)	173, 1011, 1354, 1513, 1557, 2124, 2559
SfcI	CTRYAG	1 cut(s)	243
SinI	GGWCC	2 cut(s)	701, 1909
SmiMI	CAYNNNNRTG	3 cut(s)	1362, 1509, 1823
SmlI	CTYRAG	8 cut(s)	13, 322, 434, 1100, 1787, 1886, 2306, 2438
SmoI	CTYRAG	8 cut(s)	13, 322, 434, 1100, 1787, 1886, 2306, 2438
SseBI	AGGCCT	1 cut(s)	551
SsiI	CCGC	2 cut(s)	354, 2263
SspI	AATATT	1 cut(s)	2012
SspMI	CTAG	5 cut(s)	827, 1238, 2142, 2465, 2610
StuI	AGGCCT	1 cut(s)	551
StyD4I	CCNGG	8 cut(s)	388, 460, 494, 903, 1725, 1749, 1754, 2281
StyI	CCWWGG	4 cut(s)	1052, 1818, 2098, 2120
TaaI	ACNGT	8 cut(s)	25, 49, 118, 470, 1268, 1680, 1798, 2648
TaiI	ACGT	4 cut(s)	141, 867, 971, 2043
TaqI	TCGA	7 cut(s)	178, 263, 472, 772, 954, 1551, 2046
TatI	WGTACW	1 cut(s)	979
TauI	GCSGC	1 cut(s)	2265
TfiI	GAWTC	6 cut(s)	180, 1258, 1598, 2054, 2268, 2481
TscAI	CASTG	8 cut(s)	123, 229, 1318, 1631, 2011, 2225, 2293, 2653
TseFI	GTSAC	2 cut(s)	2002, 2102
TseI	GCWGC	6 cut(s)	214, 1567, 1586, 1917, 2201, 2468
Tsp45I	GTSAC	2 cut(s)	2002, 2102
TspGWI	ACGGA	2 cut(s)	605, 1166
TspRI	CASTG	8 cut(s)	123, 229, 1318, 1631, 2011, 2225, 2293, 2653
Tth111I	GACNNNGTC	2 cut(s)	468, 653
Vha464I	CTTAAG	1 cut(s)	322
VpaK11BI	GGWCC	2 cut(s)	701, 1909
VspI	ATTAAT	1 cut(s)	1370
XagI	CCTNNNNNAGG	1 cut(s)	2280
XapI	RAATTY	3 cut(s)	1217, 2209, 2637
XbaI	TCTAGA	2 cut(s)	826, 2609
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2363
XmnI	GAANNNNTTC	2 cut(s)	1074, 2082
XspI	CTAG	5 cut(s)	827, 1238, 2142, 2465, 2610
Zsp2I	ATGCAT	1 cut(s)	1369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.