RLG00000008551

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0001004
Physical Location & Seq
Reverse (-)
31899150 .. 31901618
2469 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008551

Sequence Viewer

Length: 1386 bp
ATGGCAGAAAAAAATGGTGGTAATCAAAGTCACATTCTTGTTTTCTTTTTTCCAGTTCAAGGTCATATGAACCCAATGGTTCAATTCTCCAAGCGCCTAGCCTCCAAGGGTCAAAAGGTCACAATAGTCACAACCACCTCTGCTAGCAAATCCATGAAAACAGGCTCTTTCGGACGCAACCTGAACATCGAACTTATTTCAGATGGCTCCGAACATGTTCAGCAAGGGTCAGAAACTATGAAGCAATCTGTCGAGCGTGTCCAAACTGAAGCTACGAAATCTCTAATCGCGCTGATTAAGAAGATCAAGAATAATAGTGACGCAAATGAGAAATACTCGCTCAAGTTCCTGATTTACCATTACAGCATGCCTTGGGCTTTGAACATAGCACGAGAGCAAGGCATAGATGGTGGTCCATTTTATACGACTCCGGCTTCGGTTAAAACCATCTGTTACCACTATCACAAAGGAGTACTGAAGCTTCCCTTAGAAGAGCCGACAACAAAATTGCCTGGCCTGCCACCACTACAGCTCGAAGATTTACCATCTTTTTTCTCAGATCCTGATTCAGACCCACTTTTCATTGACATTGCCATGCAGCAATTCTCCAATTTGAGAGAAGTGAAATGGATCTTCCATAGCACTTTCAAAAAATTGGAACATGAGGTACTGGAATGGATGACAAACCAAAACCTACCGATCAAGGCGATAGGACCTACAATTCCGTCAATGTTTTTGGACAAAAAGTTGGAGGATGACAAAGACTATGGTCTTAACCTTTTTGAGCCTAATGCGGAGAGCATGAAGTGGCTAGACTCCAAGGAAACAGGTTCAGTCGTTTATGCATCATTTGGAAGTTTAGCTAACCTCACTAAAGAGCAATTTGAAGAACTAGCATGGGGTCTATATAACAGCAACCACAACTTCTTATGGGTAGTCCGTGAATCAGAAAAGGAAAAGCTCCCAACAAATTTCGGAGATAGGATAGCGGAGAAGGGTCTTGTGGTGACTTGGTGCACACAGTTACAAGTTTTAGCTCACAAGGCTGTGGGATGCTTTCTTACTCATTGTGGATGGAATTCGGCTCTCGAAGCATTAAGCTTGGGAGTACCAATGGTGGGAATGCCGCACCGGGCCGATCATCCAACTGTTGCTAAATATGTCAAGGATGTGTGGAAAGTCGGAGTTAGGGTAGAGGTGAAGGAGGGCTATGTGACGAAAGAAGAAATAAGTGCATGCATTAGGCAAGTCATGGACAAAGACAAAGGGATGGAGTATAGAAAAGCTGCACTAGTTTGGAAGGAATTGGCTAAAGAGGCAATGGCTGAGGGCGGAAGCTCTGATAAGAACATTGAGGAATTTGTGGCGAAAATGAAGTTGACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00380 ko00966 ko01110 ko01210 map00380 map00966 map01110 map01210
Pfam Domains
Protein Families
UDPGT

Protein Analysis

462

Amino Acids

51.98

Weight (kDa)

6.91

Isoelectric Point (pI)

36.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 271 - 421 1.3e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 290
AciI CCGC 4 cut(s) 794, 989, 1127, 1332
AclWI GGATC 2 cut(s) 554, 638
AcsI RAATTY 3 cut(s) 970, 1078, 1358
AcuI CTGAAG 2 cut(s) 288, 497
AfaI GTAC 3 cut(s) 474, 669, 1110
AfiI CCNNNNNNNGG 2 cut(s) 59, 1118
AflIII ACRYGT 1 cut(s) 214
AgsI TTSAA 5 cut(s) 59, 83, 382, 649, 887
AhlI ACTAGT 1 cut(s) 1291
AjnI CCWGG 1 cut(s) 511
AluBI AGCT 9 cut(s) 272, 481, 532, 863, 961, 1037, 1101, 1286, 1338
AluI AGCT 9 cut(s) 272, 481, 532, 863, 961, 1037, 1101, 1286, 1338
Alw21I GWGCWC 1 cut(s) 1019
Alw44I GTGCAC 1 cut(s) 1015
AlwI GGATC 2 cut(s) 554, 638
AlwNI CAGNNNCTG 1 cut(s) 563
AoxI GGCC 2 cut(s) 514, 1134
ApaLI GTGCAC 1 cut(s) 1015
ApeKI GCWGC 2 cut(s) 598, 1286
ApoI RAATTY 3 cut(s) 970, 1078, 1358
ArsI GACNNNNNNTTYG 2 cut(s) 418, 450
Asp700I GAANNNNTTC 1 cut(s) 216
AspLEI GCGC 2 cut(s) 96, 292
AspS9I GGNCC 3 cut(s) 413, 713, 1134
AsuC2I CCSGG 1 cut(s) 1133
AsuHPI GGTGA 2 cut(s) 1018, 1210
AsuNHI GCTAGC 1 cut(s) 143
AvaII GGWCC 2 cut(s) 413, 713
BaeGI GKGCMC 1 cut(s) 1019
BarI GAAGNNNNNNTAC 2 cut(s) 465, 497
BauI CACGAG 1 cut(s) 390
Bbv12I GWGCWC 1 cut(s) 1019
BbvCI CCTCAGC 1 cut(s) 1326
BbvI GCAGC 2 cut(s) 610, 1273
BccI CCATC 6 cut(s) 197, 401, 455, 553, 1068, 1264
BciT130I CCWGG 1 cut(s) 513
BcnI CCSGG 1 cut(s) 1133
BcuI ACTAGT 1 cut(s) 1291
BfaI CTAG 5 cut(s) 98, 144, 812, 893, 1292
BfmI CTRYAG 1 cut(s) 527
BfoI RGCGCY 1 cut(s) 97
BisI GCNGC 3 cut(s) 599, 1127, 1287
BlsI GCNGC 3 cut(s) 600, 1128, 1288
BmcAI AGTACT 1 cut(s) 474
Bme1390I CCNGG 2 cut(s) 513, 1133
Bme18I GGWCC 2 cut(s) 413, 713
BmgT120I GGNCC 3 cut(s) 413, 713, 1134
BmiI GGNNCC 1 cut(s) 208
BmrFI CCNGG 2 cut(s) 513, 1133
BmsI GCATC 2 cut(s) 854, 1043
BmtI GCTAGC 1 cut(s) 147
BoxI GACNNNNGTC 1 cut(s) 768
BplI GAGNNNNNCTC 2 cut(s) 320, 352
Bpu10I CCTNAGC 1 cut(s) 1326
BpuEI CTTGAG 1 cut(s) 326
BpuMI CCSGG 1 cut(s) 1133
BsaJI CCNNGG 3 cut(s) 105, 371, 819
BsaXI ACNNNNNCTCC 2 cut(s) 1176, 1206
Bsc4I CCNNNNNNNGG 2 cut(s) 59, 1118
Bse1I ACTGG 2 cut(s) 53, 675
Bse3DI GCAATG 2 cut(s) 588, 1326
BseBI CCWGG 1 cut(s) 513
BseDI CCNNGG 3 cut(s) 105, 371, 819
BseGI GGATG 7 cut(s) 684, 760, 1058, 1079, 1141, 1174, 1275
BseLI CCNNNNNNNGG 2 cut(s) 59, 1118
BseMI GCAATG 2 cut(s) 588, 1326
BseMII CTCAG 2 cut(s) 570, 1317
BseNI ACTGG 2 cut(s) 53, 675
BseSI GKGCMC 1 cut(s) 1019
BseXI GCAGC 2 cut(s) 610, 1273
BsgI GTGCAG 1 cut(s) 1272
Bsh1236I CGCG 1 cut(s) 290
BshFI GGCC 2 cut(s) 516, 1136
BsiHKAI GWGCWC 1 cut(s) 1019
BsiSI CCGG 2 cut(s) 431, 1132
BslI CCNNNNNNNGG 2 cut(s) 59, 1118
BsmI GAATGC 1 cut(s) 1128
BsnI GGCC 2 cut(s) 516, 1136
Bsp1286I GDGCHC 1 cut(s) 1019
Bsp143I GATC 5 cut(s) 303, 559, 630, 699, 1138
BspACI CCGC 4 cut(s) 794, 989, 1127, 1332
BspANI GGCC 2 cut(s) 516, 1136
BspCNI CTCAG 2 cut(s) 569, 1318
BspFNI CGCG 1 cut(s) 290
BspLI GGNNCC 1 cut(s) 208
BspOI GCTAGC 1 cut(s) 147
BspPI GGATC 2 cut(s) 554, 638
BspQI GCTCTTC 1 cut(s) 486
BsrDI GCAATG 2 cut(s) 588, 1326
BsrI ACTGG 2 cut(s) 53, 675
BssECI CCNNGG 3 cut(s) 105, 371, 819
BssMI GATC 5 cut(s) 303, 559, 630, 699, 1138
BssSI CACGAG 1 cut(s) 390
BssT1I CCWWGG 3 cut(s) 105, 371, 819
Bst2BI CACGAG 1 cut(s) 390
Bst2UI CCWGG 1 cut(s) 513
Bst4CI ACNGT 2 cut(s) 1023, 1150
Bst6I CTCTTC 1 cut(s) 486
BstC8I GCNNGC 4 cut(s) 145, 368, 518, 1237
BstDEI CTNAG 3 cut(s) 487, 556, 1326
BstF5I GGATG 7 cut(s) 684, 760, 1058, 1079, 1141, 1174, 1275
BstFNI CGCG 1 cut(s) 290
BstH2I RGCGCY 1 cut(s) 97
BstHHI GCGC 2 cut(s) 96, 292
BstKTI GATC 5 cut(s) 306, 562, 633, 702, 1141
BstMBI GATC 5 cut(s) 303, 559, 630, 699, 1138
BstMWI GCNNNNNNNGC 4 cut(s) 517, 1043, 1091, 1316
BstNI CCWGG 1 cut(s) 513
BstNSI RCATGY 3 cut(s) 218, 370, 1239
BstPAI GACNNNNGTC 1 cut(s) 768
BstSCI CCNGG 2 cut(s) 511, 1131
BstSFI CTRYAG 1 cut(s) 527
BstSLI GKGCMC 1 cut(s) 1019
BstUI CGCG 1 cut(s) 290
BstV1I GCAGC 2 cut(s) 610, 1273
BstX2I RGATCY 2 cut(s) 559, 630
BstYI RGATCY 2 cut(s) 559, 630
BsuRI GGCC 2 cut(s) 516, 1136
BtsCI GGATG 7 cut(s) 684, 760, 1058, 1079, 1141, 1174, 1275
Cac8I GCNNGC 4 cut(s) 145, 368, 518, 1237
CaiI CAGNNNCTG 1 cut(s) 563
CfoI GCGC 2 cut(s) 96, 292
Cfr13I GGNCC 3 cut(s) 413, 713, 1134
CseI GACGC 2 cut(s) 183, 329
Csp6I GTAC 3 cut(s) 473, 668, 1109
CviAII CATG 9 cut(s) 154, 215, 367, 595, 662, 802, 897, 1236, 1252
CviQI GTAC 3 cut(s) 473, 668, 1109
DdeI CTNAG 3 cut(s) 487, 556, 1326
DpnI GATC 5 cut(s) 305, 561, 632, 701, 1140
DpnII GATC 5 cut(s) 303, 559, 630, 699, 1138
Eam1104I CTCTTC 1 cut(s) 486
EarI CTCTTC 1 cut(s) 486
EciI GGCGGA 1 cut(s) 1347
Eco130I CCWWGG 3 cut(s) 105, 371, 819
Eco47I GGWCC 2 cut(s) 413, 713
Eco57I CTGAAG 2 cut(s) 288, 497
EcoO109I RGGNCCY 1 cut(s) 713
EcoRI GAATTC 1 cut(s) 1078
EcoRII CCWGG 1 cut(s) 511
EcoT14I CCWWGG 3 cut(s) 105, 371, 819
EcoT22I ATGCAT 2 cut(s) 847, 1241
ErhI CCWWGG 3 cut(s) 105, 371, 819
FaeI CATG 9 cut(s) 157, 218, 370, 598, 665, 805, 900, 1239, 1255
FalI AAGNNNNNCTT 2 cut(s) 470, 502
FatI CATG 9 cut(s) 153, 214, 366, 594, 661, 801, 896, 1235, 1251
FauNDI CATATG 1 cut(s) 66
Fnu4HI GCNGC 3 cut(s) 599, 1127, 1287
FokI GGATG 7 cut(s) 691, 767, 1065, 1086, 1128, 1181, 1282
Fsp4HI GCNGC 3 cut(s) 599, 1127, 1287
FspBI CTAG 5 cut(s) 98, 144, 812, 893, 1292
GlaI GCGC 2 cut(s) 95, 291
GluI GCNGC 3 cut(s) 599, 1127, 1287
HaeII RGCGCY 1 cut(s) 97
HaeIII GGCC 2 cut(s) 516, 1136
HapII CCGG 2 cut(s) 431, 1132
HgaI GACGC 2 cut(s) 183, 329
HhaI GCGC 2 cut(s) 96, 292
Hin1II CATG 9 cut(s) 157, 218, 370, 598, 665, 805, 900, 1239, 1255
Hin6I GCGC 2 cut(s) 94, 290
HinP1I GCGC 2 cut(s) 94, 290
HincII GTYRAC 1 cut(s) 1380
HindII GTYRAC 1 cut(s) 1380
HindIII AAGCTT 2 cut(s) 479, 1099
HinfI GANTC 4 cut(s) 427, 566, 815, 944
HpaII CCGG 2 cut(s) 431, 1132
HphI GGTGA 2 cut(s) 1018, 1210
Hpy166II GTNNAC 2 cut(s) 1017, 1380
Hpy188III TCNNGA 4 cut(s) 307, 349, 563, 1088
Hpy8I GTNNAC 2 cut(s) 1017, 1380
HpyAV CCTTC 3 cut(s) 988, 1195, 1294
HpyCH4III ACNGT 2 cut(s) 1023, 1150
HpyCH4V TGCA 6 cut(s) 598, 845, 1017, 1235, 1239, 1289
HpyF10VI GCNNNNNNNGC 4 cut(s) 517, 1043, 1091, 1316
HpyF3I CTNAG 3 cut(s) 487, 556, 1326
Hsp92II CATG 9 cut(s) 157, 218, 370, 598, 665, 805, 900, 1239, 1255
HspAI GCGC 2 cut(s) 94, 290
Kzo9I GATC 5 cut(s) 303, 559, 630, 699, 1138
LguI GCTCTTC 1 cut(s) 486
LmnI GCTCC 2 cut(s) 212, 966
Lsp1109I GCAGC 2 cut(s) 610, 1273
LweI GCATC 2 cut(s) 854, 1043
MaeI CTAG 5 cut(s) 98, 144, 812, 893, 1292
MaeIII GTNAC 8 cut(s) 29, 118, 127, 317, 452, 1006, 1023, 1213
MalI GATC 5 cut(s) 305, 561, 632, 701, 1140
MboI GATC 5 cut(s) 303, 559, 630, 699, 1138
MboII GAAGA 6 cut(s) 313, 503, 548, 625, 899, 1235
MflI RGATCY 2 cut(s) 559, 630
MhlI GDGCHC 1 cut(s) 1019
MlyI GAGTC 2 cut(s) 421, 809
MmeI TCCRAC 3 cut(s) 729, 1162, 1169
Mph1103I ATGCAT 2 cut(s) 847, 1241
MroXI GAANNNNTTC 1 cut(s) 216
MseI TTAA 5 cut(s) 297, 441, 774, 1097, 1384
MslI CAYNNNNRTG 1 cut(s) 593
MspI CCGG 2 cut(s) 431, 1132
MspR9I CCNGG 2 cut(s) 513, 1133
Mva1269I GAATGC 1 cut(s) 1128
MvaI CCWGG 1 cut(s) 513
MvnI CGCG 1 cut(s) 290
MwoI GCNNNNNNNGC 4 cut(s) 517, 1043, 1091, 1316
NciI CCSGG 1 cut(s) 1133
NdeI CATATG 1 cut(s) 66
NdeII GATC 5 cut(s) 303, 559, 630, 699, 1138
NheI GCTAGC 1 cut(s) 143
NlaIII CATG 9 cut(s) 157, 218, 370, 598, 665, 805, 900, 1239, 1255
NlaIV GGNNCC 1 cut(s) 208
NmuCI GTSAC 6 cut(s) 29, 118, 127, 317, 1006, 1213
NsiI ATGCAT 2 cut(s) 847, 1241
NspI RCATGY 3 cut(s) 218, 370, 1239
PaeI GCATGC 2 cut(s) 370, 1239
PciI ACATGT 1 cut(s) 214
PciSI GCTCTTC 1 cut(s) 486
PctI GAATGC 1 cut(s) 1128
PdmI GAANNNNTTC 1 cut(s) 216
PfeI GAWTC 2 cut(s) 566, 944
PkrI GCNGC 3 cut(s) 600, 1128, 1288
PleI GAGTC 2 cut(s) 421, 809
PpsI GAGTC 2 cut(s) 421, 809
PpuMI RGGWCCY 1 cut(s) 713
PscI ACATGT 1 cut(s) 214
PshAI GACNNNNGTC 1 cut(s) 768
Psp5II RGGWCCY 1 cut(s) 713
Psp6I CCWGG 1 cut(s) 511
PspGI CCWGG 1 cut(s) 511
PspN4I GGNNCC 1 cut(s) 208
PspPI GGNCC 3 cut(s) 413, 713, 1134
PspPPI RGGWCCY 1 cut(s) 713
PsrI GAACNNNNNNTAC 2 cut(s) 651, 683
PstNI CAGNNNCTG 1 cut(s) 563
PsuI RGATCY 2 cut(s) 559, 630
RsaI GTAC 3 cut(s) 474, 669, 1110
RsaNI GTAC 3 cut(s) 473, 668, 1109
RseI CAYNNNNRTG 1 cut(s) 593
SapI GCTCTTC 1 cut(s) 486
SaqAI TTAA 5 cut(s) 297, 441, 774, 1097, 1384
SatI GCNGC 3 cut(s) 599, 1127, 1287
Sau3AI GATC 5 cut(s) 303, 559, 630, 699, 1138
Sau96I GGNCC 3 cut(s) 413, 713, 1134
ScaI AGTACT 1 cut(s) 474
SchI GAGTC 2 cut(s) 421, 809
ScrFI CCNGG 2 cut(s) 513, 1133
SduI GDGCHC 1 cut(s) 1019
SfaNI GCATC 2 cut(s) 854, 1043
SfcI CTRYAG 1 cut(s) 527
SinI GGWCC 2 cut(s) 413, 713
SmiMI CAYNNNNRTG 1 cut(s) 593
SmlI CTYRAG 1 cut(s) 341
SmoI CTYRAG 1 cut(s) 341
SpeI ACTAGT 1 cut(s) 1291
SphI GCATGC 2 cut(s) 370, 1239
SsiI CCGC 4 cut(s) 794, 989, 1127, 1332
SspMI CTAG 5 cut(s) 98, 144, 812, 893, 1292
StyD4I CCNGG 2 cut(s) 511, 1131
StyI CCWWGG 3 cut(s) 105, 371, 819
TaaI ACNGT 2 cut(s) 1023, 1150
TaqI TCGA 4 cut(s) 189, 252, 534, 1089
TatI WGTACW 1 cut(s) 472
TauI GCSGC 1 cut(s) 1129
TfiI GAWTC 2 cut(s) 566, 944
Tru1I TTAA 5 cut(s) 297, 441, 774, 1097, 1384
Tru9I TTAA 5 cut(s) 297, 441, 774, 1097, 1384
TseFI GTSAC 6 cut(s) 29, 118, 127, 317, 1006, 1213
TseI GCWGC 2 cut(s) 598, 1286
Tsp45I GTSAC 6 cut(s) 29, 118, 127, 317, 1006, 1213
TspDTI ATGAA 5 cut(s) 83, 170, 254, 571, 818
TspGWI ACGGA 2 cut(s) 714, 929
VneI GTGCAC 1 cut(s) 1015
VpaK11BI GGWCC 2 cut(s) 413, 713
XapI RAATTY 3 cut(s) 970, 1078, 1358
XceI RCATGY 3 cut(s) 218, 370, 1239
XmnI GAANNNNTTC 1 cut(s) 216
XspI CTAG 5 cut(s) 98, 144, 812, 893, 1292
ZrmI AGTACT 1 cut(s) 474
Zsp2I ATGCAT 2 cut(s) 847, 1241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.