Rorug04G0094900

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
14832057 .. 14930785
98729 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0094900.1

Sequence Viewer

Length: 3252 bp
ATGAGTCATTCAACGGGCTCGCCGAACCAGATAAACTATGATGTGGAAGCCGGAAGCAACCGTTCCGGCGACGACGAGCAGTCGTCGAATGTTTTTGATATTACCAGAACTAAGCATGCTTCCGTCGAGCGTCTCCGCCGTTGGAGGCAAGCGGCACTTGTGCTAAATGCTTCTCGTCGATTCCGGTATACCTTAGACTTGAAAAAGGAGGAAGAAAAAAATCAGACGTTAAGGAAGATTAGAGCACATGCACAAGCCATACGAGCTGCATTTCTTTTTAAGGAATCCGTAACACAGGAAAATGGAATTGTGCCACCAAAACCAAGTTGTGCTGGTGAATTTCCAATTGGACAAGAAGAACTAGCTTCAATTTCAAGGGATCATAATTTTACTACTCTGCAGCAATATGGGGGGGTCAAAGGCCTCGGAGAATTATTGAAAACAAGTTTAGAAAAGGGAATTTCTGGAAGTGATGATGATTTACTAAAACGAAAAACTGCATATGGATCCAACACATATCCCCGGAAAAAACCAAGGAGTTTCTGGAGATTTCTCTGGGAAGCTTGCCAAGATCTTACTCTTATCATTTTGATGGTAGCTGCTGTGGCTTCTTTAGCGCTGGGTATAAAAACAGAGGGTATAAAGGAGGGATGGTATGATGGGGGCAGCATTGCTTTTGCAGTTCTCCTAGTCATTGTTGTGACAGCCATTAGTGACTACAAACAATCTCTGCAGTTCCAGAATCTAAATGAGGAAAAGAGAAATATACAAATTGAGGTTATCAGAGGTGGTAGACGTGTTGAGGTTTCAATTTATGATCTTGTTGTAGGTGATGTTATACCCCTTAACATTGGTGATCAGGTTCCTGCTGATGGGGTTTTAATCACTGGTCATTCACTTTCAATTGATGAGTCTAGCATGACTGGCGAGTCCAAGATTGTTCGCAAGGACTCCAAAGAACCATTTCTAATGTCCGGCTGCAAAGTAGCAGATGGAAATGGTATAATGCTGGTAACCAGTGTTGGGATTAATACTGAATGGGGATTACTCATGGCTAGCATCTCGGAAGACACTGGTGAAGAAACACCCTTGCAGGTGCGCTTGAATGGGGTTGCTACCTTCATTGGTGTTGTGGGACTCACAGTAGCTCTCCTCGTCTTATGTGTCCTTTTGGTCAGATACTTTACTGGCCATACAACAAATGCAGATGGAACTTCTCAGTTTGTTGCCGGAAAGACAAAATTTGGGAAAGCCATAGATGGAGCCATCAAAATTGTCACTATTGCAGTCACCATTGTAGTAGTTGCTGTTCCTGAAGGCCTCCCCTTAGCTGTTACCTTAACACTTGCTTACTCGATGAGAAAAATGATGGCAGATAAGGCCTTGGTACGTAGGCTTTCTGCATGTGAAACAATGGGCTCGGCCACTACTATATGCAGTGATAAGACTGGTACCTTAACTTTGAACCAGATGACTGTGGTCGAGTCTTGTGCATGTTTGAAGAAAGTCAATGACTCTGATGGCAAGCCAGACTTGTCACCAAAGATATCGTCTTTGATTATTGAAGGCATAGCTCAGAATACAACTGGCAATGTTTATGTGCCTGAGACTGGTGGTGATGTAGAGGTTACTGGATCACCAACGGAGAAGGCAATTCTGCAGTGGGCACTCAAGCTTGGGATGAATTTTGAAGCCACCAGGTCTCAATCTTCAATTCTTCATGTGTTCCCATTCAACTCCGAGAAAAAACGAGGCGGTGTAGCAGTTAAATTGCCAAACAATGAAGTTCATATACACTGGAAAGGGGCTGCTGAAATAATCTTGGCCTCATGCACAAGATATATTGAGGACAATGATCAGGTGGTAGCAATGGACGACAACAAGCTTATGCTTTTCAGGAAATCTATTGAGGATATGGCTGTTGGTAGTTTGCGTTGTGTTGCTATAGCATATTTACCATATGAATTGGAAAATGTTCCAACTGGTGAACAACAATTAGCTGATTGGGCCATGCCTGCAGATGACCTTGTTTTACTTGCTATTGTTGGTATAAAGGATCCTTGTCGACCAGGAGTCGCAGATGCAGTGAGACTATGCCAAAATGCTGGCGTTAAGGTACGCATGGTTACTGGAGACAATGTTCAGACTGCAAAGGCAATAGCATTGGAATGTGGTATACTGCGTGCTGATTCAGATCTTAGTGAGCTTCTAATTGAAGGGAAAGACTTCCGTGAGCTTTCTGATAGGCGCAGAGAAGAGGTTGCTGAGAAAATCTCGGTAATGGGACGATCCTCTCCTAATGATAAGCTTCTGCTTGTGCAAGCGCTAAGGAGAAGGGGACATGTTGTTGCTGTTACTGGAGATGGCACTAATGATGCTCCTGCACTACATGAGGCCGACATTGGTCTTGCTATGGGTATTCAAGGTACTGAGGTTGCCAAAGAGAGTTCTGATATCATTATCTTGGATGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGACGTTCTGTATATGCAAATATTCAGAAATTCATCCAATTCCAACTCACTGTCAATGTTGCCGCACTTGTTATCAATGTTGTGGCAGCGATTTCCTCTGGTGCAGTACCACTAAATGCTGTTCAGCTTCTGTGGGTGAATCTTATAATGGATACTCTTGGAGCACTAGCATTGGCTACTGAGCCTCCTACGAATCATCTGATGGACAGACAACCTGTTGGTCGAAGGGAACCACTGATAACTAATATAATGTGGAGGAACTTATTGATTCAGGCTATCTACCAAATTACGGTCCTCCTTATCTTCAATTTCCGAGGGAAAAGTATTCTTAAACTGGAACATGATTCTACTGACCATGCAGACAAAGTGAAGAACACACTGATATTCAATACCTTTGTCCTCTGTCAAATTTTCAATGAATTCAATGCCAGGAAGCCGGATGAATTCAACATATTCAAAGGAATTACCAAAAATTATCTCTTTATGGGAATAATTGCAGTGACACTTGTACTTCAGATTCTCATTGTCGAGTTTCTGGGGAAGTTTACTACAACAGTCCGGCTTAACTGGAAGCATTGGTTGATTTCTGTTGTCATCGCTTTTATCAGTTGGCCTCTTGCTGTTGTTGGGAAGTTTATTCCGGTATCCGAAACTCCTTTCCACAGATATTTCACTAGGAGTCCTCTCTTTAAGTTTATAAAACGAATATTCCGTCGGCGAAGAGAGAGAACAGAGGTCAGTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

1083

Amino Acids

119.26

Weight (kDa)

8.33

Isoelectric Point (pI)

40.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CaATP_NAI PF12515 30 - 72 2.4e-17 Ca2+-ATPase N terminal autoinhibitory domain
Cation_ATPase_N PF00690 136 - 204 1.8e-14 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 258 - 353 1.2e-20 P-type ATPase actuator domain
Hydrolase PF00702 477 - 800 2.4e-14 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 519 - 690 5.4e-31 P-type ATPase, cytoplasmic domain N
Cation_ATPase_C PF00689 871 - 1047 6e-44 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2651, 3203
AarI CACCTGC 1 cut(s) 1084
AasI GACNNNNNNGTC 1 cut(s) 928
Acc36I ACCTGC 1 cut(s) 1084
Acc65I GGTACC 1 cut(s) 1451
AccB1I GGYRCC 1 cut(s) 1451
AccI GTMKAC 4 cut(s) 188, 793, 2065, 2176
AciI CCGC 4 cut(s) 136, 152, 1755, 2568
AclWI GGATC 7 cut(s) 387, 501, 514, 1642, 2051, 2064, 2283
AcoI YGGCCR 2 cut(s) 1189, 1422
AcsI RAATTY 8 cut(s) 338, 459, 1241, 1684, 2534, 2913, 2924, 2948
AcuI CTGAAG 3 cut(s) 1335, 2466, 3002
AfaI GTAC 6 cut(s) 1389, 1453, 2118, 2428, 2613, 3015
AfeI AGCGCT 2 cut(s) 618, 2325
AfiI CCNNNNNNNGG 4 cut(s) 872, 1023, 1610, 2794
AflIII ACRYGT 2 cut(s) 796, 2341
AhdI GACNNNNNGTC 2 cut(s) 79, 2072
AjiI CACGTC 1 cut(s) 797
AjnI CCWGG 3 cut(s) 1697, 2068, 2933
AjuI GAANNNNNNNTTGG 2 cut(s) 330, 362
AloI GAACNNNNNNTCC 2 cut(s) 2124, 2156
Alw21I GWGCWC 2 cut(s) 247, 2671
Alw26I GTCTC 5 cut(s) 137, 1601, 1707, 2083, 2127
AlwI GGATC 7 cut(s) 387, 501, 514, 1642, 2051, 2064, 2283
AlwNI CAGNNNCTG 1 cut(s) 2635
Aor51HI AGCGCT 2 cut(s) 618, 2325
AoxI GGCC 9 cut(s) 421, 1189, 1318, 1380, 1422, 1824, 2007, 2394, 3116
ApeKI GCWGC 7 cut(s) 266, 400, 599, 666, 978, 1808, 2591
ApoI RAATTY 8 cut(s) 338, 459, 1241, 1684, 2534, 2913, 2924, 2948
ArsI GACNNNNNNTTYG 4 cut(s) 1535, 1567, 3202, 3234
AseI ATTAAT 1 cut(s) 1029
Asp700I GAANNNNTTC 3 cut(s) 963, 1974, 2225
Asp718I GGTACC 1 cut(s) 1451
AspLEI GCGC 4 cut(s) 619, 1101, 2250, 2326
AspS9I GGNCC 2 cut(s) 2007, 2797
AsuC2I CCSGG 1 cut(s) 523
AsuNHI GCTAGC 1 cut(s) 1055
AvaII GGWCC 1 cut(s) 2797
BaeGI GKGCMC 1 cut(s) 1669
BaeI ACNNNNGTAYC 2 cut(s) 2418, 2451
BalI TGGCCA 1 cut(s) 1191
BamHI GGATCC 2 cut(s) 506, 2056
BanI GGYRCC 1 cut(s) 1451
BanII GRGCYC 2 cut(s) 20, 1421
BarI GAAGNNNNNNTAC 2 cut(s) 1776, 1808
BbsI GAAGAC 1 cut(s) 1074
Bbv12I GWGCWC 2 cut(s) 247, 2671
BbvI GCAGC 7 cut(s) 253, 412, 586, 678, 965, 1795, 2603
BceAI ACGGC 1 cut(s) 123
BcgI CGANNNNNNTGC 2 cut(s) 1472, 1506
BciT130I CCWGG 3 cut(s) 1699, 2070, 2935
BciVI GTATCC 2 cut(s) 2650, 3160
BclI TGATCA 2 cut(s) 856, 1855
BcnI CCSGG 1 cut(s) 523
BcoDI GTCTC 5 cut(s) 137, 1601, 1707, 2083, 2127
BfaI CTAG 6 cut(s) 362, 689, 915, 1056, 2672, 3180
BfmI CTRYAG 5 cut(s) 398, 731, 1658, 1944, 2016
BfoI RGCGCY 2 cut(s) 620, 2327
BfuAI ACCTGC 1 cut(s) 1084
BfuI GTATCC 2 cut(s) 2650, 3160
BglII AGATCT 2 cut(s) 571, 2194
BisI GCNGC 9 cut(s) 153, 267, 401, 600, 667, 979, 1809, 2568, 2592
BlsI GCNGC 9 cut(s) 154, 268, 402, 601, 668, 980, 1810, 2569, 2593
Bme1390I CCNGG 4 cut(s) 523, 1699, 2070, 2935
Bme18I GGWCC 1 cut(s) 2797
BmeRI GACNNNNNGTC 2 cut(s) 79, 2072
BmgBI CACGTC 1 cut(s) 797
BmgT120I GGNCC 2 cut(s) 2007, 2797
BmiI GGNNCC 6 cut(s) 508, 864, 1264, 1453, 2058, 2736
BmrFI CCNGG 4 cut(s) 523, 1699, 2070, 2935
BmsI GCATC 3 cut(s) 1068, 2071, 2365
BmtI GCTAGC 1 cut(s) 1059
BoxI GACNNNNGTC 2 cut(s) 1478, 2403
BpiI GAAGAC 1 cut(s) 1074
BplI GAGNNNNNCTC 2 cut(s) 2258, 2290
BpmI CTGGAG 3 cut(s) 565, 2151, 2379
Bpu10I CCTNAGC 2 cut(s) 1327, 2327
BpuEI CTTGAG 1 cut(s) 1655
BpuMI CCSGG 1 cut(s) 523
BsaAI YACGTR 1 cut(s) 1391
BsaBI GATNNNNATC 1 cut(s) 2193
BsaI GGTCTC 1 cut(s) 1707
BsaJI CCNNGG 5 cut(s) 424, 521, 533, 1383, 2818
BsaWI WCCGGW 2 cut(s) 183, 3145
BsaXI ACNNNNNCTCC 6 cut(s) 638, 668, 2124, 2154, 2674, 2704
Bsc4I CCNNNNNNNGG 4 cut(s) 872, 1023, 1610, 2794
Bse3DI GCAATG 3 cut(s) 669, 1597, 1875
Bse8I GATNNNNATC 1 cut(s) 2193
BseBI CCWGG 3 cut(s) 1699, 2070, 2935
BseDI CCNNGG 5 cut(s) 424, 521, 533, 1383, 2818
BseGI GGATG 5 cut(s) 656, 1686, 2473, 2538, 2950
BseJI GATNNNNATC 1 cut(s) 2193
BseLI CCNNNNNNNGG 4 cut(s) 872, 1023, 1610, 2794
BseMI GCAATG 3 cut(s) 669, 1597, 1875
BseMII CTCAG 6 cut(s) 1232, 1589, 1596, 2256, 2421, 2676
BseRI GAGGAG 1 cut(s) 1142
BseSI GKGCMC 1 cut(s) 1669
BseXI GCAGC 7 cut(s) 253, 412, 586, 678, 965, 1795, 2603
BseYI CCCAGC 1 cut(s) 619
BsgI GTGCAG 2 cut(s) 2367, 2628
BshFI GGCC 9 cut(s) 423, 1191, 1320, 1382, 1424, 1826, 2009, 2396, 3118
BshNI GGYRCC 1 cut(s) 1451
BsiHKAI GWGCWC 2 cut(s) 247, 2671
BsiSI CCGG 9 cut(s) 51, 66, 184, 523, 975, 1230, 2942, 3064, 3146
BslFI GGGAC 4 cut(s) 1149, 2298, 2352, 2520
BslI CCNNNNNNNGG 4 cut(s) 872, 1023, 1610, 2794
BsmAI GTCTC 5 cut(s) 137, 1601, 1707, 2083, 2127
BsmBI CGTCTC 1 cut(s) 137
BsmFI GGGAC 4 cut(s) 1149, 2298, 2352, 2520
BsnI GGCC 9 cut(s) 423, 1191, 1320, 1382, 1424, 1826, 2009, 2396, 3118
Bso31I GGTCTC 1 cut(s) 1707
Bsp1286I GDGCHC 5 cut(s) 20, 247, 1421, 1669, 2671
BspACI CCGC 4 cut(s) 136, 152, 1755, 2568
BspANI GGCC 9 cut(s) 423, 1191, 1320, 1382, 1424, 1826, 2009, 2396, 3118
BspCNI CTCAG 6 cut(s) 1231, 1588, 1597, 2257, 2422, 2677
BspLI GGNNCC 6 cut(s) 508, 864, 1264, 1453, 2058, 2736
BspMAI CTGCAG 4 cut(s) 402, 735, 1662, 2020
BspMI ACCTGC 1 cut(s) 1084
BspOI GCTAGC 1 cut(s) 1059
BspPI GGATC 7 cut(s) 387, 501, 514, 1642, 2051, 2064, 2283
BspT107I GGYRCC 1 cut(s) 1451
BspTNI GGTCTC 1 cut(s) 1707
BsrDI GCAATG 3 cut(s) 669, 1597, 1875
BssECI CCNNGG 5 cut(s) 424, 521, 533, 1383, 2818
BssNAI GTATAC 2 cut(s) 189, 2177
BssT1I CCWWGG 2 cut(s) 533, 1383
Bst1107I GTATAC 2 cut(s) 189, 2177
Bst2UI CCWGG 3 cut(s) 1699, 2070, 2935
Bst4CI ACNGT 6 cut(s) 62, 1144, 1477, 2557, 2797, 3061
Bst6I CTCTTC 2 cut(s) 2250, 3220
BstBAI YACGTR 1 cut(s) 1391
BstEII GGTNACC 1 cut(s) 1012
BstF5I GGATG 5 cut(s) 656, 1686, 2473, 2538, 2950
BstH2I RGCGCY 2 cut(s) 620, 2327
BstHHI GCGC 4 cut(s) 619, 1101, 2250, 2326
BstMAI GTCTC 5 cut(s) 137, 1601, 1707, 2083, 2127
BstMWI GCNNNNNNNGC 7 cut(s) 263, 605, 614, 924, 1379, 2006, 2015
BstNI CCWGG 3 cut(s) 1699, 2070, 2935
BstNSI RCATGY 5 cut(s) 119, 251, 1407, 1497, 2345
BstPAI GACNNNNGTC 2 cut(s) 1478, 2403
BstPI GGTNACC 1 cut(s) 1012
BstSCI CCNGG 4 cut(s) 521, 1697, 2068, 2933
BstSFI CTRYAG 5 cut(s) 398, 731, 1658, 1944, 2016
BstSLI GKGCMC 1 cut(s) 1669
BstSNI TACGTA 1 cut(s) 1391
BstV1I GCAGC 7 cut(s) 253, 412, 586, 678, 965, 1795, 2603
BstV2I GAAGAC 1 cut(s) 1074
BstX2I RGATCY 4 cut(s) 506, 571, 2056, 2194
BstXI CCANNNNNNTGG 1 cut(s) 2105
BstYI RGATCY 4 cut(s) 506, 571, 2056, 2194
BstZ17I GTATAC 2 cut(s) 189, 2177
BsuI GTATCC 2 cut(s) 2650, 3160
BsuRI GGCC 9 cut(s) 423, 1191, 1320, 1382, 1424, 1826, 2009, 2396, 3118
BtgZI GCGATG 1 cut(s) 3085
BtrI CACGTC 1 cut(s) 797
BtsCI GGATG 5 cut(s) 656, 1686, 2473, 2538, 2950
BtsI GCAGTG 4 cut(s) 1444, 1667, 2091, 3009
BveI ACCTGC 1 cut(s) 1084
CaiI CAGNNNCTG 1 cut(s) 2635
CfoI GCGC 4 cut(s) 619, 1101, 2250, 2326
Cfr13I GGNCC 2 cut(s) 2007, 2797
CseI GACGC 1 cut(s) 119
CsiI ACCWGGT 1 cut(s) 1697
Csp6I GTAC 6 cut(s) 1388, 1452, 2117, 2427, 2612, 3014
CviQI GTAC 6 cut(s) 1388, 1452, 2117, 2427, 2612, 3014
DrdI GACNNNNNNGTC 1 cut(s) 928
DriI GACNNNNNGTC 2 cut(s) 79, 2072
DseDI GACNNNNNNGTC 1 cut(s) 928
EaeI YGGCCR 2 cut(s) 1189, 1422
Eam1104I CTCTTC 2 cut(s) 2250, 3220
Eam1105I GACNNNNNGTC 2 cut(s) 79, 2072
EarI CTCTTC 2 cut(s) 2250, 3220
EciI GGCGGA 1 cut(s) 125
Eco105I TACGTA 1 cut(s) 1391
Eco130I CCWWGG 2 cut(s) 533, 1383
Eco147I AGGCCT 3 cut(s) 423, 1320, 1382
Eco24I GRGCYC 2 cut(s) 20, 1421
Eco31I GGTCTC 1 cut(s) 1707
Eco32I GATATC 2 cut(s) 1548, 2455
Eco47I GGWCC 1 cut(s) 2797
Eco47III AGCGCT 2 cut(s) 618, 2325
Eco57I CTGAAG 3 cut(s) 1335, 2466, 3002
Eco91I GGTNACC 1 cut(s) 1012
EcoO65I GGTNACC 1 cut(s) 1012
EcoRI GAATTC 2 cut(s) 2924, 2948
EcoRII CCWGG 3 cut(s) 1697, 2068, 2933
EcoRV GATATC 2 cut(s) 1548, 2455
EcoT14I CCWWGG 2 cut(s) 533, 1383
EcoT38I GRGCYC 2 cut(s) 20, 1421
ErhI CCWWGG 2 cut(s) 533, 1383
Esp3I CGTCTC 1 cut(s) 137
FalI AAGNNNNNCTT 4 cut(s) 141, 173, 1517, 1549
FaqI GGGAC 4 cut(s) 1149, 2298, 2352, 2520
FauNDI CATATG 2 cut(s) 502, 1960
FbaI TGATCA 2 cut(s) 856, 1855
FblI GTMKAC 4 cut(s) 188, 793, 2065, 2176
Fnu4HI GCNGC 9 cut(s) 153, 267, 401, 600, 667, 979, 1809, 2568, 2592
FokI GGATG 5 cut(s) 663, 1693, 2480, 2525, 2957
FriOI GRGCYC 2 cut(s) 20, 1421
Fsp4HI GCNGC 9 cut(s) 153, 267, 401, 600, 667, 979, 1809, 2568, 2592
FspBI CTAG 6 cut(s) 362, 689, 915, 1056, 2672, 3180
GlaI GCGC 4 cut(s) 618, 1100, 2249, 2325
GluI GCNGC 9 cut(s) 153, 267, 401, 600, 667, 979, 1809, 2568, 2592
GsaI CCCAGC 1 cut(s) 623
GsuI CTGGAG 3 cut(s) 565, 2151, 2379
HaeII RGCGCY 2 cut(s) 620, 2327
HaeIII GGCC 9 cut(s) 423, 1191, 1320, 1382, 1424, 1826, 2009, 2396, 3118
HapII CCGG 9 cut(s) 51, 66, 184, 523, 975, 1230, 2942, 3064, 3146
HgaI GACGC 1 cut(s) 119
HhaI GCGC 4 cut(s) 619, 1101, 2250, 2326
Hin6I GCGC 4 cut(s) 617, 1099, 2248, 2324
HinP1I GCGC 4 cut(s) 617, 1099, 2248, 2324
HincII GTYRAC 1 cut(s) 2066
HindII GTYRAC 1 cut(s) 2066
HindIII AAGCTT 4 cut(s) 561, 1673, 1883, 2306
HpaII CCGG 9 cut(s) 51, 66, 184, 523, 975, 1230, 2942, 3064, 3146
Hpy166II GTNNAC 6 cut(s) 189, 794, 1988, 2066, 2177, 3051
Hpy188III TCNNGA 5 cut(s) 465, 544, 739, 1313, 1897
Hpy8I GTNNAC 6 cut(s) 189, 794, 1988, 2066, 2177, 3051
Hpy99I CGWCG 6 cut(s) 74, 77, 88, 128, 180, 3222
HpyAV CCTTC 8 cut(s) 1129, 1310, 1559, 1642, 2210, 2328, 2485, 2724
HpyCH4III ACNGT 6 cut(s) 62, 1144, 1477, 2557, 2797, 3061
HpyCH4IV ACGT 4 cut(s) 227, 796, 1390, 2509
HpyF10VI GCNNNNNNNGC 7 cut(s) 263, 605, 614, 924, 1379, 2006, 2015
HpySE526I ACGT 4 cut(s) 227, 796, 1390, 2509
HspAI GCGC 4 cut(s) 617, 1099, 2248, 2324
KpnI GGTACC 1 cut(s) 1455
Ksp22I TGATCA 2 cut(s) 856, 1855
LmnI GCTCC 3 cut(s) 1262, 2383, 2666
Lsp1109I GCAGC 7 cut(s) 253, 412, 586, 678, 965, 1795, 2603
LweI GCATC 3 cut(s) 1068, 2071, 2365
MabI ACCWGGT 1 cut(s) 1697
MaeI CTAG 6 cut(s) 362, 689, 915, 1056, 2672, 3180
MaeII ACGT 4 cut(s) 227, 796, 1390, 2509
MfeI CAATTG 2 cut(s) 345, 903
MflI RGATCY 4 cut(s) 506, 571, 2056, 2194
MhlI GDGCHC 5 cut(s) 20, 247, 1421, 1669, 2671
MlsI TGGCCA 1 cut(s) 1191
MluNI TGGCCA 1 cut(s) 1191
MlyI GAGTC 9 cut(s) 13, 920, 938, 944, 1131, 1493, 1508, 2082, 3193
MmeI TCCRAC 4 cut(s) 122, 534, 2003, 2572
Mox20I TGGCCA 1 cut(s) 1191
MroXI GAANNNNTTC 3 cut(s) 963, 1974, 2225
MscI TGGCCA 1 cut(s) 1191
MslI CAYNNNNRTG 3 cut(s) 590, 698, 2167
Msp20I TGGCCA 1 cut(s) 1191
MspI CCGG 9 cut(s) 51, 66, 184, 523, 975, 1230, 2942, 3064, 3146
MspR9I CCNGG 4 cut(s) 523, 1699, 2070, 2935
MunI CAATTG 2 cut(s) 345, 903
MvaI CCWGG 3 cut(s) 1699, 2070, 2935
MwoI GCNNNNNNNGC 7 cut(s) 263, 605, 614, 924, 1379, 2006, 2015
NciI CCSGG 1 cut(s) 523
NdeI CATATG 2 cut(s) 502, 1960
NheI GCTAGC 1 cut(s) 1055
NlaIV GGNNCC 6 cut(s) 508, 864, 1264, 1453, 2058, 2736
NmeAIII GCCGAG 1 cut(s) 1400
NmuCI GTSAC 6 cut(s) 700, 713, 1276, 1288, 1536, 3004
NspI RCATGY 5 cut(s) 119, 251, 1407, 1497, 2345
PaeI GCATGC 1 cut(s) 119
PaqCI CACCTGC 1 cut(s) 1084
PceI AGGCCT 3 cut(s) 423, 1320, 1382
PciI ACATGT 1 cut(s) 2341
PcsI WCGNNNNNNNCGW 2 cut(s) 20, 3214
PdmI GAANNNNTTC 3 cut(s) 963, 1974, 2225
PfeI GAWTC 9 cut(s) 180, 284, 742, 2189, 2644, 2698, 2773, 2849, 3022
PkrI GCNGC 9 cut(s) 154, 268, 402, 601, 668, 980, 1810, 2569, 2593
PleI GAGTC 9 cut(s) 12, 919, 937, 944, 1131, 1492, 1508, 2081, 3192
PpsI GAGTC 9 cut(s) 12, 919, 937, 944, 1131, 1492, 1508, 2081, 3192
Ppu21I YACGTR 1 cut(s) 1391
PscI ACATGT 1 cut(s) 2341
PshAI GACNNNNGTC 2 cut(s) 1478, 2403
PshBI ATTAAT 1 cut(s) 1029
PsiI TTATAA 2 cut(s) 2651, 3203
Psp6I CCWGG 3 cut(s) 1697, 2068, 2933
PspEI GGTNACC 1 cut(s) 1012
PspFI CCCAGC 1 cut(s) 619
PspGI CCWGG 3 cut(s) 1697, 2068, 2933
PspN4I GGNNCC 6 cut(s) 508, 864, 1264, 1453, 2058, 2736
PspPI GGNCC 2 cut(s) 2007, 2797
PsrI GAACNNNNNNTAC 2 cut(s) 1293, 1325
PstI CTGCAG 4 cut(s) 402, 735, 1662, 2020
PstNI CAGNNNCTG 1 cut(s) 2635
PsuI RGATCY 4 cut(s) 506, 571, 2056, 2194
RsaI GTAC 6 cut(s) 1389, 1453, 2118, 2428, 2613, 3015
RsaNI GTAC 6 cut(s) 1388, 1452, 2117, 2427, 2612, 3014
RseI CAYNNNNRTG 3 cut(s) 590, 698, 2167
SalI GTCGAC 1 cut(s) 2064
SatI GCNGC 9 cut(s) 153, 267, 401, 600, 667, 979, 1809, 2568, 2592
Sau96I GGNCC 2 cut(s) 2007, 2797
SchI GAGTC 9 cut(s) 13, 920, 938, 944, 1131, 1493, 1508, 2082, 3193
ScrFI CCNGG 4 cut(s) 523, 1699, 2070, 2935
SduI GDGCHC 5 cut(s) 20, 247, 1421, 1669, 2671
SexAI ACCWGGT 1 cut(s) 1697
SfaNI GCATC 3 cut(s) 1068, 2071, 2365
SfcI CTRYAG 5 cut(s) 398, 731, 1658, 1944, 2016
SinI GGWCC 1 cut(s) 2797
SmiMI CAYNNNNRTG 3 cut(s) 590, 698, 2167
SmlI CTYRAG 1 cut(s) 1670
SmoI CTYRAG 1 cut(s) 1670
SnaBI TACGTA 1 cut(s) 1391
SphI GCATGC 1 cut(s) 119
SseBI AGGCCT 3 cut(s) 423, 1320, 1382
SsiI CCGC 4 cut(s) 136, 152, 1755, 2568
SspI AATATT 2 cut(s) 2527, 3213
SspMI CTAG 6 cut(s) 362, 689, 915, 1056, 2672, 3180
StuI AGGCCT 3 cut(s) 423, 1320, 1382
StyD4I CCNGG 4 cut(s) 521, 1697, 2068, 2933
StyI CCWWGG 2 cut(s) 533, 1383
TaaI ACNGT 6 cut(s) 62, 1144, 1477, 2557, 2797, 3061
TaiI ACGT 4 cut(s) 230, 799, 1393, 2512
TaqI TCGA 8 cut(s) 86, 126, 178, 1355, 1482, 2065, 2728, 3033
TatI WGTACW 1 cut(s) 3013
TauI GCSGC 2 cut(s) 155, 2570
TfiI GAWTC 9 cut(s) 180, 284, 742, 2189, 2644, 2698, 2773, 2849, 3022
TseFI GTSAC 6 cut(s) 700, 713, 1276, 1288, 1536, 3004
TseI GCWGC 7 cut(s) 266, 400, 599, 666, 978, 1808, 2591
Tsp45I GTSAC 6 cut(s) 700, 713, 1276, 1288, 1536, 3004
TspDTI ATGAA 9 cut(s) 1111, 1697, 1709, 1778, 1797, 1977, 2527, 2937, 2961
TspGWI ACGGA 5 cut(s) 112, 277, 1658, 2219, 3206
VpaK11BI GGWCC 1 cut(s) 2797
VspI ATTAAT 1 cut(s) 1029
XapI RAATTY 8 cut(s) 338, 459, 1241, 1684, 2534, 2913, 2924, 2948
XceI RCATGY 5 cut(s) 119, 251, 1407, 1497, 2345
XcmI CCANNNNNNNNNTGG 1 cut(s) 540
XmiI GTMKAC 4 cut(s) 188, 793, 2065, 2176
XmnI GAANNNNTTC 3 cut(s) 963, 1974, 2225
XspI CTAG 6 cut(s) 362, 689, 915, 1056, 2672, 3180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.