RLG00000008554

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0001004
Physical Location & Seq
Reverse (-)
31927947 .. 31929966
2020 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008554

Sequence Viewer

Length: 1416 bp
ATGAAGCTGGATTTGGAAGAACATATGGGTGCTGGTGCTGCTCAGAGCCACATTCTAGTGTTTCCTTTTCCGGTTCAAGGTCACATGAACCCGATGGTTCAATTCGCCAAGCGGCTAGTCTCTAAAGGCCAAAGGGTCACTATAGTCACCACCTTCTCAGCTAGCAAATCCGTATCAACAATCAATCCCACCTCGTTCGGATCCAACCTCAAAATGGAGTTCATCTCAGATGGCTCCGGACAAGTTAAGGATTCTGAAACTATTGAGGAGTCTATTGAGCGTTTCCGAATCTCAACCACGAAGTCCTTAACCAACCTCATGATGAAGATCAGGAACAGCAGCGATGCGTCGCAATACCCTCTCAAGTTCGTGGTGTACCACTCGGGCATGCCGTGGGTTTTAGATGTGGCACGGCGACAAGGCATAGATGGGGCTCCATTTTTCACAACTTCATGTGCAGTTGCAACTATTTTTCACCATGTCCATGAAGGAACACTACAGCTACCCTTAGAAGGTCCAAGGGCAATAATGCCGTCTATGCCACCATTAGAGCTCAACGATCTACCGACGTTTCTCTCCGATGTCGAGTCATACCCAGCTTTCCTTAAGCTTGCCATGAATCAATTCTCCAATTTGAAGCAAGTAAACTGCATCTTCTATAGCAGTTTTGATAAGTTGGAAAAAGAGGTACTAAAATGGATGGAGAGCCAAGACTGGCCGGTCAAGATGATAGGACCAACAATTCCATCAGTTTTCTTGGACAAGCGGGTGGAGGATGACAAAGAATATGGTCTTAGCCTTTTCAAGCCAAATGTGGAGACTTGCATGAAATGGTTGGACTCCAAGAAACCTGGCTCAGTCGTCTATGCATCATTTGGAAGCTTGGCCGACCTAAGCATAGAGCAAACTGCGGAACTCGCATGGGGTCTTAAGAATAGCAGTTTCAACTTCCTGTGGGTAGTCCGAGAAACGGAAAAAGATAAACTACCTAAGAATTTTGTAAAAGAGATATCAGGGAAGGGTCTGGTAGTGAGTTGGTGCCCACAGCTACAAGTCTTGGCTCACAAGGCAGTGGGATGTTTCCTCACTCACTGTGGATGGAATTCGACTCTCGAAGCGTTGAGCTTGGGAGTACCGATGGTGGTATTGCCACACTGGGCTGATCAGCCGACGAATGCAAAGTTTGTGGCGGATGTGTGGAAAGTCGGAGTTAGGGTGAATGTGAACAAGAAATCTGGTCTTGCAACAAAAGAAGACATAGCTGTGCGTATTAAGGAGGTCATGGACAAGGAAAAGGGGAAGAAGTTTAAAAAGGCTTCGTTGATTTGGAAGGAATTGGCTAAAGAGGCTGTGGATGAAGGGGGAAGCTCTGATAAGAACATCGAAGAATTTGTGGCAAAAGTTCTATTAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00380 ko00966 ko01110 ko01210 map00380 map00966 map01110 map01210
Pfam Domains
Protein Families
UDPGT

Protein Analysis

472

Amino Acids

52.6

Weight (kDa)

8.33

Isoelectric Point (pI)

37.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 18 - 435 1.7e-29 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 343 - 429 7.3e-06 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 719
AccB1I GGYRCC 1 cut(s) 1038
AccIII TCCGGA 1 cut(s) 236
AciI CCGC 4 cut(s) 112, 766, 911, 1190
AclWI GGATC 2 cut(s) 195, 208
AcoI YGGCCR 2 cut(s) 716, 885
AcsI RAATTY 3 cut(s) 994, 1102, 1388
AfaI GTAC 3 cut(s) 377, 690, 1134
AfiI CCNNNNNNNGG 4 cut(s) 77, 214, 512, 970
AflII CTTAAG 2 cut(s) 605, 929
AgsI TTSAA 5 cut(s) 77, 101, 637, 805, 946
AjnI CCWGG 1 cut(s) 850
AjuI GAANNNNNNNTTGG 1 cut(s) 28
Alw21I GWGCWC 1 cut(s) 555
Alw26I GTCTC 2 cut(s) 124, 812
AlwI GGATC 2 cut(s) 195, 208
Ama87I CYCGRG 1 cut(s) 382
Aor13HI TCCGGA 1 cut(s) 236
AoxI GGCC 3 cut(s) 127, 716, 885
ApeKI GCWGC 2 cut(s) 38, 339
ApoI RAATTY 3 cut(s) 994, 1102, 1388
AseI ATTAAT 1 cut(s) 1409
Asp700I GAANNNNTTC 1 cut(s) 623
AspS9I GGNCC 2 cut(s) 515, 734
AsuHPI GGTGA 3 cut(s) 139, 467, 1228
AsuNHI GCTAGC 1 cut(s) 161
AvaI CYCGRG 1 cut(s) 382
AvaII GGWCC 2 cut(s) 515, 734
BaeGI GKGCMC 1 cut(s) 1043
BamHI GGATCC 1 cut(s) 200
BanI GGYRCC 1 cut(s) 1038
BanII GRGCYC 2 cut(s) 436, 555
BarI GAAGNNNNNNTAC 2 cut(s) 480, 512
BbsI GAAGAC 1 cut(s) 1260
Bbv12I GWGCWC 1 cut(s) 555
BbvI GCAGC 2 cut(s) 25, 351
BccI CCATC 7 cut(s) 88, 224, 422, 694, 754, 1092, 1132
BceAI ACGGC 3 cut(s) 376, 428, 517
BciT130I CCWGG 1 cut(s) 852
BclI TGATCA 1 cut(s) 1162
BcoDI GTCTC 2 cut(s) 124, 812
BfaI CTAG 3 cut(s) 56, 116, 162
BfmI CTRYAG 3 cut(s) 141, 497, 658
BfrI CTTAAG 2 cut(s) 605, 929
BisI GCNGC 3 cut(s) 39, 113, 340
BlsI GCNGC 3 cut(s) 40, 114, 341
Bme1390I CCNGG 1 cut(s) 852
Bme18I GGWCC 2 cut(s) 515, 734
BmeT110I CYCGRG 1 cut(s) 382
BmgT120I GGNCC 2 cut(s) 515, 734
BmiI GGNNCC 4 cut(s) 202, 235, 435, 1040
BmrFI CCNGG 1 cut(s) 852
BmrI ACTGGG 1 cut(s) 1165
BmsI GCATC 3 cut(s) 334, 660, 878
BmtI GCTAGC 1 cut(s) 165
BmuI ACTGGG 1 cut(s) 1165
BpiI GAAGAC 1 cut(s) 1260
BplI GAGNNNNNCTC 2 cut(s) 209, 241
Bpu10I CCTNAGC 1 cut(s) 893
BpuEI CTTGAG 1 cut(s) 347
BsaBI GATNNNNATC 1 cut(s) 326
BsaJI CCNNGG 2 cut(s) 392, 518
BsaWI WCCGGW 2 cut(s) 70, 236
BsaXI ACNNNNNCTCC 2 cut(s) 1200, 1230
Bsc4I CCNNNNNNNGG 4 cut(s) 77, 214, 512, 970
Bse118I RCCGGY 1 cut(s) 718
Bse1I ACTGG 2 cut(s) 719, 1160
Bse8I GATNNNNATC 1 cut(s) 326
BseAI TCCGGA 1 cut(s) 236
BseBI CCWGG 1 cut(s) 852
BseDI CCNNGG 2 cut(s) 392, 518
BseGI GGATG 6 cut(s) 705, 781, 1082, 1103, 1198, 1360
BseJI GATNNNNATC 1 cut(s) 326
BseLI CCNNNNNNNGG 4 cut(s) 77, 214, 512, 970
BseMII CTCAG 4 cut(s) 56, 171, 240, 870
BseNI ACTGG 2 cut(s) 719, 1160
BseRI GAGGAG 1 cut(s) 281
BseSI GKGCMC 1 cut(s) 1043
BseXI GCAGC 2 cut(s) 25, 351
BseYI CCCAGC 1 cut(s) 595
BsgI GTGCAG 1 cut(s) 477
BshFI GGCC 3 cut(s) 129, 718, 887
BshNI GGYRCC 1 cut(s) 1038
BsiHKAI GWGCWC 1 cut(s) 555
BsiHKCI CYCGRG 1 cut(s) 382
BsiSI CCGG 3 cut(s) 71, 237, 719
BslI CCNNNNNNNGG 4 cut(s) 77, 214, 512, 970
BsmAI GTCTC 2 cut(s) 124, 812
BsmI GAATGC 1 cut(s) 1180
BsnI GGCC 3 cut(s) 129, 718, 887
BsoBI CYCGRG 1 cut(s) 382
Bsp1286I GDGCHC 3 cut(s) 436, 555, 1043
Bsp13I TCCGGA 1 cut(s) 236
Bsp143I GATC 4 cut(s) 200, 327, 559, 1162
BspACI CCGC 4 cut(s) 112, 766, 911, 1190
BspANI GGCC 3 cut(s) 129, 718, 887
BspCNI CTCAG 4 cut(s) 55, 170, 239, 869
BspEI TCCGGA 1 cut(s) 236
BspHI TCATGA 1 cut(s) 318
BspLI GGNNCC 4 cut(s) 202, 235, 435, 1040
BspOI GCTAGC 1 cut(s) 165
BspPI GGATC 2 cut(s) 195, 208
BspT107I GGYRCC 1 cut(s) 1038
BspTI CTTAAG 2 cut(s) 605, 929
BsrFI RCCGGY 1 cut(s) 718
BsrI ACTGG 2 cut(s) 719, 1160
BssAI RCCGGY 1 cut(s) 718
BssECI CCNNGG 2 cut(s) 392, 518
BssMI GATC 4 cut(s) 200, 327, 559, 1162
BssT1I CCWWGG 1 cut(s) 518
Bst2UI CCWGG 1 cut(s) 852
Bst4CI ACNGT 1 cut(s) 1094
BstAFI CTTAAG 2 cut(s) 605, 929
BstC8I GCNNGC 3 cut(s) 163, 389, 612
BstDEI CTNAG 8 cut(s) 42, 157, 226, 508, 794, 856, 893, 990
BstDSI CCRYGG 1 cut(s) 392
BstF5I GGATG 6 cut(s) 705, 781, 1082, 1103, 1198, 1360
BstKTI GATC 4 cut(s) 203, 330, 562, 1165
BstMAI GTCTC 2 cut(s) 124, 812
BstMBI GATC 4 cut(s) 200, 327, 559, 1162
BstMWI GCNNNNNNNGC 5 cut(s) 38, 538, 917, 1067, 1346
BstNI CCWGG 1 cut(s) 852
BstNSI RCATGY 1 cut(s) 391
BstSCI CCNGG 1 cut(s) 850
BstSFI CTRYAG 3 cut(s) 141, 497, 658
BstSLI GKGCMC 1 cut(s) 1043
BstV1I GCAGC 2 cut(s) 25, 351
BstV2I GAAGAC 1 cut(s) 1260
BstX2I RGATCY 1 cut(s) 200
BstYI RGATCY 1 cut(s) 200
BsuRI GGCC 3 cut(s) 129, 718, 887
BtgI CCRYGG 1 cut(s) 392
BtgZI GCGATG 1 cut(s) 357
BtsCI GGATG 6 cut(s) 705, 781, 1082, 1103, 1198, 1360
BtsI GCAGTG 1 cut(s) 1077
BtsIMutI CAGTG 3 cut(s) 1077, 1090, 1153
Cac8I GCNNGC 3 cut(s) 163, 389, 612
CciI TCATGA 1 cut(s) 318
Cfr10I RCCGGY 1 cut(s) 718
Cfr13I GGNCC 2 cut(s) 515, 734
CseI GACGC 1 cut(s) 336
Csp6I GTAC 3 cut(s) 376, 689, 1133
CspCI CAANNNNNGTGG 2 cut(s) 1167, 1202
CviQI GTAC 3 cut(s) 376, 689, 1133
DdeI CTNAG 8 cut(s) 42, 157, 226, 508, 794, 856, 893, 990
DpnI GATC 4 cut(s) 202, 329, 561, 1164
DpnII GATC 4 cut(s) 200, 327, 559, 1162
DraI TTTAAA 1 cut(s) 1309
DrdI GACNNNNNNGTC 1 cut(s) 719
DseDI GACNNNNNNGTC 1 cut(s) 719
EaeI YGGCCR 2 cut(s) 716, 885
EciI GGCGGA 1 cut(s) 1205
Ecl136II GAGCTC 1 cut(s) 553
Eco130I CCWWGG 1 cut(s) 518
Eco24I GRGCYC 2 cut(s) 436, 555
Eco32I GATATC 1 cut(s) 1011
Eco47I GGWCC 2 cut(s) 515, 734
Eco53kI GAGCTC 1 cut(s) 553
Eco88I CYCGRG 1 cut(s) 382
EcoICRI GAGCTC 1 cut(s) 553
EcoRI GAATTC 1 cut(s) 1102
EcoRII CCWGG 1 cut(s) 850
EcoRV GATATC 1 cut(s) 1011
EcoT14I CCWWGG 1 cut(s) 518
EcoT22I ATGCAT 1 cut(s) 871
EcoT38I GRGCYC 2 cut(s) 436, 555
ErhI CCWWGG 1 cut(s) 518
FauI CCCGC 1 cut(s) 759
FauNDI CATATG 1 cut(s) 24
FbaI TGATCA 1 cut(s) 1162
Fnu4HI GCNGC 3 cut(s) 39, 113, 340
FokI GGATG 6 cut(s) 712, 788, 1089, 1110, 1205, 1367
FriOI GRGCYC 2 cut(s) 436, 555
Fsp4HI GCNGC 3 cut(s) 39, 113, 340
FspBI CTAG 3 cut(s) 56, 116, 162
GluI GCNGC 3 cut(s) 39, 113, 340
GsaI CCCAGC 1 cut(s) 599
HaeIII GGCC 3 cut(s) 129, 718, 887
HapII CCGG 3 cut(s) 71, 237, 719
HgaI GACGC 1 cut(s) 336
HindIII AAGCTT 2 cut(s) 608, 880
HinfI GANTC 7 cut(s) 251, 269, 288, 587, 619, 839, 1108
HpaII CCGG 3 cut(s) 71, 237, 719
HphI GGTGA 3 cut(s) 139, 467, 1228
Hpy166II GTNNAC 3 cut(s) 376, 646, 1225
Hpy188III TCNNGA 5 cut(s) 237, 319, 331, 724, 1112
Hpy8I GTNNAC 3 cut(s) 376, 646, 1225
Hpy99I CGWCG 3 cut(s) 352, 571, 1174
HpyAV CCTTC 6 cut(s) 163, 482, 506, 1012, 1324, 1352
HpyCH4III ACNGT 1 cut(s) 1094
HpyCH4IV ACGT 1 cut(s) 569
HpyCH4V TGCA 7 cut(s) 458, 464, 651, 825, 869, 1178, 1244
HpyF10VI GCNNNNNNNGC 5 cut(s) 38, 538, 917, 1067, 1346
HpyF3I CTNAG 8 cut(s) 42, 157, 226, 508, 794, 856, 893, 990
HpySE526I ACGT 1 cut(s) 569
Kpn2I TCCGGA 1 cut(s) 236
Ksp22I TGATCA 1 cut(s) 1162
Kzo9I GATC 4 cut(s) 200, 327, 559, 1162
LmnI GCTCC 2 cut(s) 239, 439
Lsp1109I GCAGC 2 cut(s) 25, 351
LweI GCATC 3 cut(s) 334, 660, 878
MaeI CTAG 3 cut(s) 56, 116, 162
MaeII ACGT 1 cut(s) 569
MaeIII GTNAC 3 cut(s) 80, 136, 145
MalI GATC 4 cut(s) 202, 329, 561, 1164
MboI GATC 4 cut(s) 200, 327, 559, 1162
MboII GAAGA 6 cut(s) 29, 337, 646, 1265, 1312, 1397
MflI RGATCY 1 cut(s) 200
MhlI GDGCHC 3 cut(s) 436, 555, 1043
MluCI AATT 8 cut(s) 101, 623, 631, 741, 994, 1102, 1334, 1388
MlyI GAGTC 4 cut(s) 278, 596, 833, 1102
MmeI TCCRAC 4 cut(s) 228, 657, 816, 1186
Mph1103I ATGCAT 1 cut(s) 871
MroI TCCGGA 1 cut(s) 236
MroXI GAANNNNTTC 1 cut(s) 623
MseI TTAA 7 cut(s) 246, 308, 606, 930, 1272, 1308, 1409
MslI CAYNNNNRTG 4 cut(s) 27, 56, 483, 1262
MspCI CTTAAG 2 cut(s) 605, 929
MspI CCGG 3 cut(s) 71, 237, 719
MspR9I CCNGG 1 cut(s) 852
Mva1269I GAATGC 1 cut(s) 1180
MvaI CCWGG 1 cut(s) 852
MwoI GCNNNNNNNGC 5 cut(s) 38, 538, 917, 1067, 1346
NdeI CATATG 1 cut(s) 24
NdeII GATC 4 cut(s) 200, 327, 559, 1162
NheI GCTAGC 1 cut(s) 161
NlaIV GGNNCC 4 cut(s) 202, 235, 435, 1040
NmuCI GTSAC 3 cut(s) 80, 136, 145
NsiI ATGCAT 1 cut(s) 871
NspI RCATGY 1 cut(s) 391
PaeI GCATGC 1 cut(s) 391
PagI TCATGA 1 cut(s) 318
PcsI WCGNNNNNNNCGW 1 cut(s) 389
PctI GAATGC 1 cut(s) 1180
PdmI GAANNNNTTC 1 cut(s) 623
PfeI GAWTC 3 cut(s) 251, 288, 619
PkrI GCNGC 3 cut(s) 40, 114, 341
PleI GAGTC 4 cut(s) 277, 595, 833, 1102
PpsI GAGTC 4 cut(s) 277, 595, 833, 1102
PshBI ATTAAT 1 cut(s) 1409
Psp124BI GAGCTC 1 cut(s) 555
Psp6I CCWGG 1 cut(s) 850
PspFI CCCAGC 1 cut(s) 595
PspGI CCWGG 1 cut(s) 850
PspN4I GGNNCC 4 cut(s) 202, 235, 435, 1040
PspPI GGNCC 2 cut(s) 515, 734
PsuI RGATCY 1 cut(s) 200
RsaI GTAC 3 cut(s) 377, 690, 1134
RsaNI GTAC 3 cut(s) 376, 689, 1133
RseI CAYNNNNRTG 4 cut(s) 27, 56, 483, 1262
SacI GAGCTC 1 cut(s) 555
SaqAI TTAA 7 cut(s) 246, 308, 606, 930, 1272, 1308, 1409
SatI GCNGC 3 cut(s) 39, 113, 340
Sau3AI GATC 4 cut(s) 200, 327, 559, 1162
Sau96I GGNCC 2 cut(s) 515, 734
SchI GAGTC 4 cut(s) 278, 596, 833, 1102
ScrFI CCNGG 1 cut(s) 852
SduI GDGCHC 3 cut(s) 436, 555, 1043
SfaNI GCATC 3 cut(s) 334, 660, 878
SfcI CTRYAG 3 cut(s) 141, 497, 658
SinI GGWCC 2 cut(s) 515, 734
SmiMI CAYNNNNRTG 4 cut(s) 27, 56, 483, 1262
SmlI CTYRAG 3 cut(s) 362, 605, 929
SmoI CTYRAG 3 cut(s) 362, 605, 929
SphI GCATGC 1 cut(s) 391
Sse9I AATT 8 cut(s) 101, 623, 631, 741, 994, 1102, 1334, 1388
SsiI CCGC 4 cut(s) 112, 766, 911, 1190
SspMI CTAG 3 cut(s) 56, 116, 162
SstI GAGCTC 1 cut(s) 555
StyD4I CCNGG 1 cut(s) 850
StyI CCWWGG 1 cut(s) 518
TaaI ACNGT 1 cut(s) 1094
TaiI ACGT 1 cut(s) 572
TaqI TCGA 4 cut(s) 585, 1106, 1113, 1383
TasI AATT 8 cut(s) 101, 623, 631, 741, 994, 1102, 1334, 1388
TauI GCSGC 1 cut(s) 115
TfiI GAWTC 3 cut(s) 251, 288, 619
Tru1I TTAA 7 cut(s) 246, 308, 606, 930, 1272, 1308, 1409
Tru9I TTAA 7 cut(s) 246, 308, 606, 930, 1272, 1308, 1409
TscAI CASTG 3 cut(s) 1077, 1097, 1160
TseFI GTSAC 3 cut(s) 80, 136, 145
TseI GCWGC 2 cut(s) 38, 339
Tsp45I GTSAC 3 cut(s) 80, 136, 145
TspDTI ATGAA 9 cut(s) 17, 101, 211, 338, 441, 501, 632, 842, 1371
TspGWI ACGGA 2 cut(s) 160, 986
TspRI CASTG 3 cut(s) 1077, 1097, 1160
Vha464I CTTAAG 2 cut(s) 605, 929
VpaK11BI GGWCC 2 cut(s) 515, 734
VspI ATTAAT 1 cut(s) 1409
XapI RAATTY 3 cut(s) 994, 1102, 1388
XceI RCATGY 1 cut(s) 391
XcmI CCANNNNNNNNNTGG 1 cut(s) 211
XmnI GAANNNNTTC 1 cut(s) 623
XspI CTAG 3 cut(s) 56, 116, 162
Zsp2I ATGCAT 1 cut(s) 871
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.