RLG00000015646

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0001004
Physical Location & Seq
Reverse (-)
369750 .. 371514
1765 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015646

Sequence Viewer

Length: 1431 bp
ATGGAGAGGGAATGTGAAACAATATCTGCTGCTCCAGCTGAGATCCTAGTATTCCCATTTCCTGGTCAGGGCCATATGTGCCCAATGGTTCAGTTCTCCAAGCGACTTGCCTCTAAAGGTCTTAGAGTCACAGTCGTCTCAACCATCTCTGCTGCCAAGTCTATTCAGCAAAGTCCGGCCCATGCCCAAGCTTTCCAAGTAGAATTCATTTCGGATGGTTCCAAAGATGAACACAAGTCTGAAAATTTGGACGAAGCTATTGAGCGTTTCAAAAAGGCAACTACACAATCTCTAACCGAACTTATCATCAACATCCAGAACAAGAACACCACTACTACTACCTGTACTAGCAATGGTGATCATGCCTCCTCCGTAGAACAGCGCGACAACAAGGCATGCGCGACTGCATCTGTCTACTATCACTTCCGTGAAGGGGCATGTAAGATAAGTACTACTACTCCCACCTCTGGTTTAGATGACGACTCAGAAGCTGCTAATCATGGAAGATCATCACCATCTACCGACACAATATTATTACCGGCTATGCCACCACTTGGAGTCAATGACTTACCATCTTTTCTATGTGATACTCATTCCTATCCAGTTTTATGTAAACATATCCTGAATCAATTCTGCAATTTCCGGGAAGCAAAATGGCAATTGTACAACACTTTTGATACGTTAGAACATGAGGTAGTCAAATGGATGACAAGTCAGTCTTGGGCAGTGAAGACAGTAGGACCAACAATTCCGTCAATGTTTCTGGACAAGCGATTTGAAGATGACAAAGACTATAGTTTCAACCTCTTCGAGCCTGAGGAGACTTATTTGAAGTGGCTTGACTCCAAGGAAACTGGCTCAGTGGTTTATGCATCATTTGGAAGCTACGGTAGCCTAGAAAATAAGCAAATGGAGGAAATAGCTTGGGGTCTGAAGAACAGCAACTACCACTTCTTGTGGGTAGTCAGAGAATTAGAGAAGGAGAAGCTTCCGATGAATTTCATAAAGGAGGTATCAGATTCAGCTGATCAGAAGGGTCTTGTCGTGAGTTGGTGCTCGCAGCTGCGAGTGTTGGCTCACAAGGCCTTAGGATGCTTTGTTACTCACTGCGGATGGAATTCGACCCTTGAAGCTTTGAGCTTAGGGGCCCCGATGGTGGCAATGCCGCAATGGACTGATCAAACAACAAACGCCAAGTTTGTTGAGGATGTGTGGAAAGCAGGAGTTAGAGTGAGAGTGGATGAGAAATTAGGTGTTGCAACAAAAGAAGAGATAGCTAACTGTATTAGGCAAGTCATGGAAGAGGAAAAAGGGGCGGAGATCAGAAAGGCTTTATCAAATTGGACGCAATTGGCGAAAGAGGCGGTCAACCAAGGGGGAAGCTCCGATCAAAATATTGAGGAGTTTGTGGCACAACTTCTGTTAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00380 ko00966 ko01110 ko01210 map00380 map00966 map01110 map01210
Pfam Domains
Protein Families
UDPGT

Protein Analysis

477

Amino Acids

53.23

Weight (kDa)

5.31

Isoelectric Point (pI)

44.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 281 - 437 4.8e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 715
AccB7I CCANNNNNTGG 2 cut(s) 62, 554
AccI GTMKAC 1 cut(s) 414
AccII CGCG 2 cut(s) 384, 401
AciI CCGC 4 cut(s) 1110, 1166, 1316, 1364
AclWI GGATC 1 cut(s) 37
AcsI RAATTY 4 cut(s) 203, 244, 997, 1117
AcuI CTGAAG 1 cut(s) 953
AfaI GTAC 3 cut(s) 346, 451, 665
AfiI CCNNNNNNNGG 6 cut(s) 62, 68, 433, 467, 554, 1156
AgsI TTSAA 5 cut(s) 271, 779, 802, 832, 1130
AjnI CCWGG 1 cut(s) 61
AleI CACNNNNGTG 1 cut(s) 426
Alw21I GWGCWC 1 cut(s) 1058
Alw26I GTCTC 2 cut(s) 142, 815
AlwI GGATC 1 cut(s) 37
AlwNI CAGNNNCTG 1 cut(s) 491
AoxI GGCC 4 cut(s) 70, 177, 1083, 1146
ApaI GGGCCC 1 cut(s) 1150
ApeKI GCWGC 5 cut(s) 29, 152, 491, 1060, 1063
ApoI RAATTY 4 cut(s) 203, 244, 997, 1117
ArsI GACNNNNNNTTYG 2 cut(s) 758, 790
Asp700I GAANNNNTTC 1 cut(s) 629
AspLEI GCGC 2 cut(s) 384, 401
AspS9I GGNCC 5 cut(s) 70, 178, 740, 1146, 1147
AsuC2I CCSGG 1 cut(s) 644
AsuHPI GGTGA 2 cut(s) 368, 504
AvaII GGWCC 1 cut(s) 740
AxyI CCTNAGG 2 cut(s) 816, 1087
BaeGI GKGCMC 2 cut(s) 83, 1150
BanII GRGCYC 1 cut(s) 1150
BbsI GAAGAC 1 cut(s) 737
Bbv12I GWGCWC 1 cut(s) 1058
BbvI GCAGC 5 cut(s) 16, 139, 478, 1050, 1072
BccI CCATC 6 cut(s) 152, 209, 523, 580, 1107, 1147
BciT130I CCWGG 1 cut(s) 63
BclI TGATCA 3 cut(s) 358, 1027, 1177
BcnI CCSGG 1 cut(s) 644
BcoDI GTCTC 2 cut(s) 142, 815
BfaI CTAG 3 cut(s) 47, 348, 896
BfmI CTRYAG 1 cut(s) 793
BisI GCNGC 6 cut(s) 30, 153, 492, 1061, 1064, 1166
BlsI GCNGC 6 cut(s) 31, 154, 493, 1062, 1065, 1167
BmcAI AGTACT 1 cut(s) 451
Bme1390I CCNGG 2 cut(s) 63, 644
Bme18I GGWCC 1 cut(s) 740
BmgT120I GGNCC 5 cut(s) 70, 178, 740, 1146, 1147
BmiI GGNNCC 4 cut(s) 220, 1147, 1148, 1149
BmrFI CCNGG 2 cut(s) 63, 644
BmsI GCATC 3 cut(s) 416, 881, 1082
BpiI GAAGAC 1 cut(s) 737
BpmI CTGGAG 1 cut(s) 18
Bpu10I CCTNAGC 1 cut(s) 1141
BpuMI CCSGG 1 cut(s) 644
BsaJI CCNNGG 2 cut(s) 846, 1372
BsaXI ACNNNNNCTCC 4 cut(s) 442, 472, 1215, 1245
Bsc4I CCNNNNNNNGG 6 cut(s) 62, 68, 433, 467, 554, 1156
Bse118I RCCGGY 1 cut(s) 538
Bse1I ACTGG 2 cut(s) 602, 859
Bse21I CCTNAGG 2 cut(s) 816, 1087
Bse3DI GCAATG 3 cut(s) 358, 1167, 1175
BseBI CCWGG 1 cut(s) 63
BseDI CCNNGG 2 cut(s) 846, 1372
BseGI GGATG 7 cut(s) 220, 312, 711, 1097, 1118, 1213, 1246
BseLI CCNNNNNNNGG 6 cut(s) 62, 68, 433, 467, 554, 1156
BseMI GCAATG 3 cut(s) 358, 1167, 1175
BseMII CTCAG 4 cut(s) 30, 498, 807, 873
BseNI ACTGG 2 cut(s) 602, 859
BseRI GAGGAG 3 cut(s) 358, 833, 1415
BseSI GKGCMC 2 cut(s) 83, 1150
BseXI GCAGC 5 cut(s) 16, 139, 478, 1050, 1072
Bsh1236I CGCG 2 cut(s) 384, 401
BshFI GGCC 4 cut(s) 72, 179, 1085, 1148
BsiHKAI GWGCWC 1 cut(s) 1058
BsiSI CCGG 3 cut(s) 176, 539, 643
BslI CCNNNNNNNGG 6 cut(s) 62, 68, 433, 467, 554, 1156
BsmAI GTCTC 2 cut(s) 142, 815
BsmBI CGTCTC 1 cut(s) 142
BsnI GGCC 4 cut(s) 72, 179, 1085, 1148
Bsp120I GGGCCC 1 cut(s) 1146
Bsp1286I GDGCHC 3 cut(s) 83, 1058, 1150
Bsp1407I TGTACA 1 cut(s) 663
Bsp143I GATC 7 cut(s) 42, 358, 506, 1027, 1177, 1320, 1387
BspACI CCGC 4 cut(s) 1110, 1166, 1316, 1364
BspANI GGCC 4 cut(s) 72, 179, 1085, 1148
BspCNI CTCAG 4 cut(s) 31, 497, 808, 872
BspFNI CGCG 2 cut(s) 384, 401
BspLI GGNNCC 4 cut(s) 220, 1147, 1148, 1149
BspPI GGATC 1 cut(s) 37
BsrDI GCAATG 3 cut(s) 358, 1167, 1175
BsrFI RCCGGY 1 cut(s) 538
BsrGI TGTACA 1 cut(s) 663
BsrI ACTGG 2 cut(s) 602, 859
BssAI RCCGGY 1 cut(s) 538
BssECI CCNNGG 2 cut(s) 846, 1372
BssMI GATC 7 cut(s) 42, 358, 506, 1027, 1177, 1320, 1387
BssT1I CCWWGG 2 cut(s) 846, 1372
Bst2UI CCWGG 1 cut(s) 63
Bst4CI ACNGT 4 cut(s) 133, 736, 890, 1283
Bst6I CTCTTC 3 cut(s) 812, 1263, 1296
BstAUI TGTACA 1 cut(s) 663
BstC8I GCNNGC 2 cut(s) 397, 1058
BstDEI CTNAG 7 cut(s) 39, 122, 484, 816, 859, 1087, 1141
BstF5I GGATG 7 cut(s) 220, 312, 711, 1097, 1118, 1213, 1246
BstFNI CGCG 2 cut(s) 384, 401
BstHHI GCGC 2 cut(s) 384, 401
BstKTI GATC 7 cut(s) 45, 361, 509, 1030, 1180, 1323, 1390
BstMAI GTCTC 2 cut(s) 142, 815
BstMBI GATC 7 cut(s) 42, 358, 506, 1027, 1177, 1320, 1387
BstMWI GCNNNNNNNGC 5 cut(s) 35, 78, 891, 1082, 1361
BstNI CCWGG 1 cut(s) 63
BstNSI RCATGY 2 cut(s) 399, 441
BstSCI CCNGG 2 cut(s) 61, 642
BstSFI CTRYAG 1 cut(s) 793
BstSLI GKGCMC 2 cut(s) 83, 1150
BstUI CGCG 2 cut(s) 384, 401
BstV1I GCAGC 5 cut(s) 16, 139, 478, 1050, 1072
BstV2I GAAGAC 1 cut(s) 737
BstX2I RGATCY 1 cut(s) 42
BstYI RGATCY 1 cut(s) 42
Bsu36I CCTNAGG 2 cut(s) 816, 1087
BsuRI GGCC 4 cut(s) 72, 179, 1085, 1148
BtsCI GGATG 7 cut(s) 220, 312, 711, 1097, 1118, 1213, 1246
BtsI GCAGTG 2 cut(s) 732, 1105
BtsIMutI CAGTG 3 cut(s) 732, 867, 1105
Cac8I GCNNGC 2 cut(s) 397, 1058
CaiI CAGNNNCTG 1 cut(s) 491
CfoI GCGC 2 cut(s) 384, 401
Cfr10I RCCGGY 1 cut(s) 538
Cfr13I GGNCC 5 cut(s) 70, 178, 740, 1146, 1147
CseI GACGC 1 cut(s) 1354
Csp6I GTAC 3 cut(s) 345, 450, 664
CviAII CATG 7 cut(s) 182, 362, 396, 438, 500, 689, 1297
CviQI GTAC 3 cut(s) 345, 450, 664
DdeI CTNAG 7 cut(s) 39, 122, 484, 816, 859, 1087, 1141
DpnI GATC 7 cut(s) 44, 360, 508, 1029, 1179, 1322, 1389
DpnII GATC 7 cut(s) 42, 358, 506, 1027, 1177, 1320, 1387
DrdI GACNNNNNNGTC 1 cut(s) 715
DseDI GACNNNNNNGTC 1 cut(s) 715
Eam1104I CTCTTC 3 cut(s) 812, 1263, 1296
EarI CTCTTC 3 cut(s) 812, 1263, 1296
EciI GGCGGA 1 cut(s) 1331
Eco130I CCWWGG 2 cut(s) 846, 1372
Eco147I AGGCCT 1 cut(s) 1085
Eco24I GRGCYC 1 cut(s) 1150
Eco47I GGWCC 1 cut(s) 740
Eco57I CTGAAG 1 cut(s) 953
Eco81I CCTNAGG 2 cut(s) 816, 1087
EcoO109I RGGNCCY 2 cut(s) 1146, 1147
EcoRI GAATTC 2 cut(s) 203, 1117
EcoRII CCWGG 1 cut(s) 61
EcoT14I CCWWGG 2 cut(s) 846, 1372
EcoT22I ATGCAT 1 cut(s) 874
EcoT38I GRGCYC 1 cut(s) 1150
ErhI CCWWGG 2 cut(s) 846, 1372
Esp3I CGTCTC 1 cut(s) 142
FaeI CATG 7 cut(s) 185, 365, 399, 441, 503, 692, 1300
FalI AAGNNNNNCTT 2 cut(s) 703, 735
FatI CATG 7 cut(s) 181, 361, 395, 437, 499, 688, 1296
FauNDI CATATG 1 cut(s) 75
FbaI TGATCA 3 cut(s) 358, 1027, 1177
FblI GTMKAC 1 cut(s) 414
Fnu4HI GCNGC 6 cut(s) 30, 153, 492, 1061, 1064, 1166
FokI GGATG 7 cut(s) 227, 299, 718, 1104, 1125, 1220, 1253
FriOI GRGCYC 1 cut(s) 1150
Fsp4HI GCNGC 6 cut(s) 30, 153, 492, 1061, 1064, 1166
FspBI CTAG 3 cut(s) 47, 348, 896
GlaI GCGC 2 cut(s) 383, 400
GluI GCNGC 6 cut(s) 30, 153, 492, 1061, 1064, 1166
GsuI CTGGAG 1 cut(s) 18
HaeIII GGCC 4 cut(s) 72, 179, 1085, 1148
HapII CCGG 3 cut(s) 176, 539, 643
HgaI GACGC 1 cut(s) 1354
HhaI GCGC 2 cut(s) 384, 401
Hin1II CATG 7 cut(s) 185, 365, 399, 441, 503, 692, 1300
Hin6I GCGC 2 cut(s) 382, 399
HinP1I GCGC 2 cut(s) 382, 399
HincII GTYRAC 1 cut(s) 1369
HindII GTYRAC 1 cut(s) 1369
HindIII AAGCTT 3 cut(s) 189, 986, 1131
HinfI GANTC 6 cut(s) 126, 482, 558, 625, 842, 1019
HpaII CCGG 3 cut(s) 176, 539, 643
HphI GGTGA 2 cut(s) 368, 504
Hpy166II GTNNAC 3 cut(s) 415, 614, 1369
Hpy188III TCNNGA 4 cut(s) 316, 622, 764, 1045
Hpy8I GTNNAC 3 cut(s) 415, 614, 1369
HpyAV CCTTC 3 cut(s) 425, 973, 1027
HpyCH4III ACNGT 4 cut(s) 133, 736, 890, 1283
HpyCH4IV ACGT 1 cut(s) 680
HpyCH4V TGCA 4 cut(s) 407, 636, 872, 1259
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 78, 891, 1082, 1361
HpyF3I CTNAG 7 cut(s) 39, 122, 484, 816, 859, 1087, 1141
HpySE526I ACGT 1 cut(s) 680
Hsp92II CATG 7 cut(s) 185, 365, 399, 441, 503, 692, 1300
HspAI GCGC 2 cut(s) 382, 399
Ksp22I TGATCA 3 cut(s) 358, 1027, 1177
Kzo9I GATC 7 cut(s) 42, 358, 506, 1027, 1177, 1320, 1387
LmnI GCTCC 2 cut(s) 37, 1388
Lsp1109I GCAGC 5 cut(s) 16, 139, 478, 1050, 1072
LweI GCATC 3 cut(s) 416, 881, 1082
MaeI CTAG 3 cut(s) 47, 348, 896
MaeII ACGT 1 cut(s) 680
MaeIII GTNAC 2 cut(s) 127, 1099
MalI GATC 7 cut(s) 44, 360, 508, 1029, 1179, 1322, 1389
MboI GATC 7 cut(s) 42, 358, 506, 1027, 1177, 1320, 1387
MboII GAAGA 7 cut(s) 516, 742, 791, 799, 946, 1280, 1313
MfeI CAATTG 2 cut(s) 659, 1349
MflI RGATCY 1 cut(s) 42
MhlI GDGCHC 3 cut(s) 83, 1058, 1150
MlyI GAGTC 4 cut(s) 135, 476, 567, 836
Mph1103I ATGCAT 1 cut(s) 874
MroXI GAANNNNTTC 1 cut(s) 629
MseI TTAA 1 cut(s) 1424
MslI CAYNNNNRTG 1 cut(s) 426
MspA1I CMGCKG 3 cut(s) 38, 1025, 1063
MspI CCGG 3 cut(s) 176, 539, 643
MspR9I CCNGG 2 cut(s) 63, 644
MunI CAATTG 2 cut(s) 659, 1349
MvaI CCWGG 1 cut(s) 63
MvnI CGCG 2 cut(s) 384, 401
MwoI GCNNNNNNNGC 5 cut(s) 35, 78, 891, 1082, 1361
NciI CCSGG 1 cut(s) 644
NdeI CATATG 1 cut(s) 75
NdeII GATC 7 cut(s) 42, 358, 506, 1027, 1177, 1320, 1387
NlaIII CATG 7 cut(s) 185, 365, 399, 441, 503, 692, 1300
NlaIV GGNNCC 4 cut(s) 220, 1147, 1148, 1149
NmuCI GTSAC 1 cut(s) 127
NsiI ATGCAT 1 cut(s) 874
NspI RCATGY 2 cut(s) 399, 441
OliI CACNNNNGTG 1 cut(s) 426
PaeI GCATGC 1 cut(s) 399
PceI AGGCCT 1 cut(s) 1085
PcsI WCGNNNNNNNCGW 1 cut(s) 1352
PdmI GAANNNNTTC 1 cut(s) 629
PfeI GAWTC 2 cut(s) 625, 1019
PflMI CCANNNNNTGG 2 cut(s) 62, 554
PfoI TCCNGGA 1 cut(s) 642
PkrI GCNGC 6 cut(s) 31, 154, 493, 1062, 1065, 1167
PleI GAGTC 4 cut(s) 134, 476, 566, 836
PpsI GAGTC 4 cut(s) 134, 476, 566, 836
Psp6I CCWGG 1 cut(s) 61
PspGI CCWGG 1 cut(s) 61
PspN4I GGNNCC 4 cut(s) 220, 1147, 1148, 1149
PspOMI GGGCCC 1 cut(s) 1146
PspPI GGNCC 5 cut(s) 70, 178, 740, 1146, 1147
PsrI GAACNNNNNNTAC 2 cut(s) 929, 961
PstNI CAGNNNCTG 1 cut(s) 491
PsuI RGATCY 1 cut(s) 42
PvuII CAGCTG 3 cut(s) 38, 1025, 1063
RsaI GTAC 3 cut(s) 346, 451, 665
RsaNI GTAC 3 cut(s) 345, 450, 664
RseI CAYNNNNRTG 1 cut(s) 426
SaqAI TTAA 1 cut(s) 1424
SatI GCNGC 6 cut(s) 30, 153, 492, 1061, 1064, 1166
Sau3AI GATC 7 cut(s) 42, 358, 506, 1027, 1177, 1320, 1387
Sau96I GGNCC 5 cut(s) 70, 178, 740, 1146, 1147
ScaI AGTACT 1 cut(s) 451
SchI GAGTC 4 cut(s) 135, 476, 567, 836
ScrFI CCNGG 2 cut(s) 63, 644
SduI GDGCHC 3 cut(s) 83, 1058, 1150
SfaNI GCATC 3 cut(s) 416, 881, 1082
SfcI CTRYAG 1 cut(s) 793
SinI GGWCC 1 cut(s) 740
SmiMI CAYNNNNRTG 1 cut(s) 426
SphI GCATGC 1 cut(s) 399
SseBI AGGCCT 1 cut(s) 1085
SsiI CCGC 4 cut(s) 1110, 1166, 1316, 1364
SspI AATATT 2 cut(s) 531, 1396
SspMI CTAG 3 cut(s) 47, 348, 896
StuI AGGCCT 1 cut(s) 1085
StyD4I CCNGG 2 cut(s) 61, 642
StyI CCWWGG 2 cut(s) 846, 1372
TaaI ACNGT 4 cut(s) 133, 736, 890, 1283
TaiI ACGT 1 cut(s) 683
TaqI TCGA 2 cut(s) 810, 1121
TatI WGTACW 3 cut(s) 344, 449, 663
TauI GCSGC 1 cut(s) 1168
TfiI GAWTC 2 cut(s) 625, 1019
Tru1I TTAA 1 cut(s) 1424
Tru9I TTAA 1 cut(s) 1424
TscAI CASTG 3 cut(s) 732, 867, 1112
TseFI GTSAC 1 cut(s) 127
TseI GCWGC 5 cut(s) 29, 152, 491, 1060, 1063
Tsp45I GTSAC 1 cut(s) 127
TspDTI ATGAA 4 cut(s) 196, 243, 991, 1010
TspGWI ACGGA 3 cut(s) 361, 416, 741
TspRI CASTG 3 cut(s) 732, 867, 1112
Van91I CCANNNNNTGG 2 cut(s) 62, 554
VpaK11BI GGWCC 1 cut(s) 740
XapI RAATTY 4 cut(s) 203, 244, 997, 1117
XceI RCATGY 2 cut(s) 399, 441
XmiI GTMKAC 1 cut(s) 414
XmnI GAANNNNTTC 1 cut(s) 629
XspI CTAG 3 cut(s) 47, 348, 896
ZrmI AGTACT 1 cut(s) 451
Zsp2I ATGCAT 1 cut(s) 874
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.