RLG00000023940

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0001944
Physical Location & Seq
Forward (+)
30282879 .. 30288571
5693 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023940

Sequence Viewer

Length: 3792 bp
ATGGAACGAGGAGGAGAGATGACAATGAATAAGAAAAAAGCAAGTGATCAAGACAAGCAGAGTGTTCCATTTTACAAGCTGTTTATGTTCGCTGACCAATACGACATCACGTTGATGATCATCGGAAGTTTAAGTGCGATTGGAAATGGGCTATCACAGCCACTCATGACGCTGGTCTTCGGTGGTCTTATCAATACTTTTGGAGCTACCGACCCAGCTCATATTCTCCCTACTGTTTCTCAGGTGTCTCTAAAGTTTTTGTACTTGGCTATTGGTACAGGCCTCGCTGCATTTTTGCAGGTCTCATGTTGGATGGTGACTGGGGAAAGACAAGCCACTCGAATTCGAGGCTTGTACTTGAAAACAATACTAAGACAGGATATTGGATTTTTCGACACCCAAACTAACACCGGAGAGATCATTGGGAGAATGTCAGGGGACACTATTCTCATTCAAAATGCCATGGGCGAAAAGGTGGGGAAGTTCATACAGCTCCTTTCAACTTTTCTCGGCGGTTTTGTAATTGCTTTTCTCAAAGGATGGCTTCTCACCTTGGTTTTGCTGTCCTGTATTCCTGCAATTGTTATTGCTGGAGGAGTCATGTCCATTGTCGTTTCTAAAATGTCAACACGCGGGCAGCGTGCTTATGCAGAAGCTGGCACTATAGTAGAACAAACTGTTGGAGCCATCAGAACAGTTGCATCTTTTACCGGAGAGAAGGAAGCGATAGATAAATACAACCAGAAGCTGAAAATTGCGTACAATAACACGGTTCGACAAGGACTAGCCACAGGGGTTGGACTTGGTACATTCATGCTTATTGTCTTTGGCACTTATGGACTTGCCATATGGTATGGATCAAAAATGATTATTGAGAAAGGCTACAATGGGGGCCAAGTCATCAATGTTCTATTTGCAATGATGAGTGGTGGAATGGCACTAGGTCAGACATCACCGTCTCTTAATGCATTTACAACAGGAAAAGCTGCTGCATATAAAATGCTTGAGACCATCAAGCGAACACCAACGATTGATCCTTATGATACTACTGGAGTTGTATTGGAAGATGTTAAAGGAGAGGTTGAACTTAAAGATGTGTATTTCAGGTATCCTGCTAGGCCAGATGTGCAGATCTTTGCTGGATTCTCGTTGCTTGTTCCAAGTGGCACAACGACTGCTTTGGTTGGGCAGAGTGGAAGTGGGAAGTCAACAGTAATAGGCTTGGTAGAGAGGTTTTATGATCCAGAAGCCGGTGAAGTGTTTATAGATGGAGTCGATTTGAAGAAGTTGCATCTCAGATCAATAAGGGAGAGGATTGGGCTTGTAAGTCAAGAGCCAAATCTTTTTACAACAACAATAAGGCAGAACATAGCATATGGGAAAGAAAATGCAACCGAAGAGGAGGTTAGAAGAGCCCTAGAGCTTGCAAATGCAGCAAAGTTCATTGATAAACTGCCCAAGGGGCTTGACACAATGGTAGGCGGAACATCATTATCGGGTGGACAAAAGCAAAGAATTGCAATTGCTAGAGCCATTTTGAAGAACCCAAGAATTCTGCTTCTCGACGAAGCAACAAGCGCTCTAGATACTGAGTCTGAACGAATAGTTCAAGATGCACTTATCAGATTAATGTCAAATAGGACAACTATAGTTGTTGCTCATCGCTTGACAACGATAAGAAATGCTGATGCAATAGCAGTGGTTCATAAAGGGAAAATTGTAGAAAAAGGAACTCACGACGAATTGACCAAAGATCCAGAAGGAGCTTACAGCCAACTACTTCGCCTACAGGAAGGAGCTAAAGAAAAAGATGCAGAATCGACTGGTCTAGATAATGGTATAGACATAGATAAGACCATGCTTAGCTCTGGAAGCCAGAGACTATCAGCAGGGGCATCTTTAAGCAGAGGTTCATCAGGTAACCGGCTGTCCACCACAATTAGCAGCTTTGGTACTCCTGCTTTGGTTAATTGCCAAGTGACTGAAGTAGTTGAAGGGGAGAGCCTTGAAAAAACTAAGGTTGATCCTGAAGAGCGTAAAGCAGTTTCCATCAAAAGGTTGGCCATGATGAACAAAAATGAGCTTCCAATTTTGCTTATTGGAGCCATTGCTGCAGCTGGTCATGGAGTAATTTTTCCTGTATTCGGCTTACTACTCTCAAAAGCCATTAAAATGTTCTATGAACCGCATAGTGTGCTACGAGAAGACTCGAAAACATGGGCTGGAGTGTATGTAGGGATGGGTTGCCTTGGGCTGGTTGTCGTTCCGGTGCAGAATTTCTTCTTTGGAGTTGCAGGTGGAAAATTGATACAGCAAATTCGTTCCTTGACATTTCAAAAGGTGGTGCACCAAGAAATCAGTTGGTTTGATGATCCCGCAAATTCAAGTGGTGCCATTGGTGCAAGGTTGTCTTCTGATGCTTCAACCGTGAAGGCTCTTGTTGGTGACGGCTTAGCCTTAATTGCACAAAATATAGCAACTGTCATAGCAGGGTTGGTTATAGGTTTCACAGCTAACTGGAAACTAGCGCTTCTAATTTTAGGCGTGTCGCCATTATTGATTATGCAAGGAGTACTTCAAACAAAATTTCTTAAAGGGTTTAGTGGAGATGCCAAGGTTATGTATGAAGAAGCTAGCCAAGTGGCAAATGATGCAATTGGTAGCATTCGAACTGTTGCATCATTTTGTTCTGAAAAGAAGGTGATGGATGCTTATGAGAAGAAGTGTGAAGGTCCCATGAAGCAAGGAGTACGGTTAGGAGTAGTGAGCGGTGTAGGTTTTGGCTTCTCTTTCTTCGTAATGTTCTGCACCAATGCATTAATTTTCTACATTGGAGCTATTCTTGTAAAAAATGGGCAAGCTAAATTTGAACAAGTATTCATGGTGTTCTTTGCTTTGACAATCTCGGCAGTAGGAGTTTCAGAATCTAGTGGTATGGCTCCTGACTCCAACAAAGCAAAGGACTCAGCAGCTTCAATATTTAAAATTCTTGACAGTAAGCCTAAGATCGACTCGAGCAGCGATGCAGGCTTAACACTACCGAGCATAAGTGGAAAAATTGATCTCGAACATGTCAGCTTCAAATATCCCACAAGGCAGGATGTGCAGATATTTAGAGACGTTTGCTTGAATATCCCCTCTGGAAAGACTGTTGCTTTGGTTGGAGAGAGTGGCAGTGGGAAGTCGACAGTGATTGGCCTGATAGAGAGATTCTATGACCCCGACTCAGGTCGTGTACTACTAGATGGAGTGGAAATCAATAGGTTCAAGATAAACTGGCTGAGGCAACAAATAGGTTTGGTTGGTCAAGAACCAATTCTCTTTAACGAATCTATTCGGACCAATATTGCTTATGGAAAGCGAGGAGATGTAACTGAAGAAGAGATCATTGCAGCCACAAAAGCATCAAATGCTCACAACTTCATTTCTTCATTGCCTCAAGCATATGACACCTCAGTTGGGGAACGAGGGGTTCAGTTATCTGGAGGGCAGAAGCAAAGAATAGCCATTGCAAGGGCTATTCTAAAGGACCCGAAAATTCTTTTGCTTGACGAAGCTACAAGCGCACTGGATGCAGAGTCGGAACGCATAGTACAAGATGCTTTAGACAGAGTGATGGTGAATAGAACAACTGTTGTCGTTGCGCACCGCCTTACCACGATCAAAGGGGCAGACATAATTGCTGTGGTCAAGAACGGCGTGATTGCTGAGAAGGGTAGCCATGATGTTCTAATGAAGATCACTGATGGTGCTTATGCATCTTTGGTGGCACTTCATTCAAGCTCAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1264

Amino Acids

135.87

Weight (kDa)

8.78

Isoelectric Point (pI)

32.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 39 - 310 5.2e-60 ABC transporter transmembrane region
ABC_tran PF00005 381 - 526 3.7e-31 ABC transporter
ABC_membrane PF00664 698 - 970 1.1e-59 ABC transporter transmembrane region
ABC_tran PF00005 1039 - 1188 3.6e-33 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2285
AasI GACNNNNNNGTC 1 cut(s) 955
Acc16I TGCGCA 1 cut(s) 3645
Acc36I ACCTGC 2 cut(s) 289, 2285
AccB1I GGYRCC 1 cut(s) 2390
AccBSI CCGCTC 1 cut(s) 2769
AccI GTMKAC 1 cut(s) 3185
AccII CGCG 1 cut(s) 633
AciI CCGC 7 cut(s) 513, 633, 1482, 2186, 2376, 2769, 3649
AclWI GGATC 6 cut(s) 865, 1028, 1235, 1748, 2018, 2366
AcoI YGGCCR 1 cut(s) 2061
AcsI RAATTY 9 cut(s) 342, 1551, 2275, 2316, 2380, 2585, 2864, 2985, 3537
AcuI CTGAAG 3 cut(s) 2004, 2049, 3396
AfeI AGCGCT 2 cut(s) 1579, 2529
AfiI CCNNNNNNNGG 7 cut(s) 1250, 2055, 2144, 2254, 3227, 3459, 3513
AflIII ACRYGT 1 cut(s) 3070
AjuI GAANNNNNNNTTGG 2 cut(s) 663, 695
Alw21I GWGCWC 1 cut(s) 2349
Alw26I GTCTC 6 cut(s) 252, 307, 963, 1001, 1873, 3111
Alw44I GTGCAC 1 cut(s) 2345
AlwI GGATC 6 cut(s) 865, 1028, 1235, 1748, 2018, 2366
AlwNI CAGNNNCTG 2 cut(s) 656, 748
Ama87I CYCGRG 1 cut(s) 3013
Aor51HI AGCGCT 2 cut(s) 1579, 2529
AoxI GGCC 5 cut(s) 280, 892, 1118, 2061, 3196
ApaLI GTGCAC 1 cut(s) 2345
ApoI RAATTY 9 cut(s) 342, 1551, 2275, 2316, 2380, 2585, 2864, 2985, 3537
ArsI GACNNNNNNTTYG 2 cut(s) 3139, 3171
AseI ATTAAT 2 cut(s) 1628, 2819
Asp700I GAANNNNTTC 3 cut(s) 2279, 3315, 3333
AspLEI GCGC 4 cut(s) 1580, 2530, 3566, 3646
AspS9I GGNCC 4 cut(s) 892, 2732, 3339, 3529
AsuHPI GGTGA 7 cut(s) 328, 541, 945, 1265, 2456, 2713, 3631
AsuII TTCGAA 1 cut(s) 2668
AsuNHI GCTAGC 1 cut(s) 2633
AvaI CYCGRG 1 cut(s) 3013
AvaII GGWCC 3 cut(s) 2732, 3339, 3529
BaeGI GKGCMC 1 cut(s) 2349
BalI TGGCCA 1 cut(s) 2063
BanI GGYRCC 1 cut(s) 2390
BanII GRGCYC 1 cut(s) 1417
BbsI GAAGAC 3 cut(s) 169, 2211, 2403
Bbv12I GWGCWC 1 cut(s) 2349
BbvCI CCTCAGC 1 cut(s) 3281
BceAI ACGGC 2 cut(s) 2464, 3712
BciVI GTATCC 1 cut(s) 1119
BclI TGATCA 2 cut(s) 46, 117
BcoDI GTCTC 6 cut(s) 252, 307, 963, 1001, 1873, 3111
BfmI CTRYAG 4 cut(s) 663, 1647, 1787, 2112
BfoI RGCGCY 2 cut(s) 1581, 2531
BfuAI ACCTGC 2 cut(s) 289, 2285
BfuI GTATCC 1 cut(s) 1119
BglI GCCNNNNNGGC 1 cut(s) 1462
BglII AGATCT 1 cut(s) 1131
BlpI GCTNAGC 2 cut(s) 1862, 2452
BmcAI AGTACT 1 cut(s) 2574
Bme18I GGWCC 3 cut(s) 2732, 3339, 3529
BmeT110I CYCGRG 1 cut(s) 3013
BmgT120I GGNCC 4 cut(s) 892, 2732, 3339, 3529
BmiI GGNNCC 7 cut(s) 685, 893, 2104, 2392, 2734, 2940, 3531
BmrI ACTGGG 1 cut(s) 330
BmtI GCTAGC 1 cut(s) 2637
BmuI ACTGGG 1 cut(s) 330
BoxI GACNNNNGTC 2 cut(s) 173, 3228
BpiI GAAGAC 3 cut(s) 169, 2211, 2403
BpmI CTGGAG 4 cut(s) 612, 1071, 2244, 3504
Bpu10I CCTNAGC 1 cut(s) 3281
Bpu1102I GCTNAGC 2 cut(s) 1862, 2452
Bpu14I TTCGAA 1 cut(s) 2668
BpuEI CTTGAG 2 cut(s) 1025, 3423
BsaBI GATNNNNATC 1 cut(s) 119
BsaI GGTCTC 2 cut(s) 307, 1001
BsaJI CCNNGG 5 cut(s) 462, 552, 1458, 2248, 2613
BsaWI WCCGGW 3 cut(s) 410, 710, 2266
BsaXI ACNNNNNCTCC 2 cut(s) 2217, 2247
Bsc4I CCNNNNNNNGG 7 cut(s) 1250, 2055, 2144, 2254, 3227, 3459, 3513
Bse118I RCCGGY 2 cut(s) 1250, 1923
Bse1I ACTGG 6 cut(s) 325, 1054, 1828, 2522, 3281, 3573
Bse3DI GCAATG 5 cut(s) 924, 2106, 3387, 3431, 3507
Bse8I GATNNNNATC 1 cut(s) 119
BseDI CCNNGG 5 cut(s) 462, 552, 1458, 2248, 2613
BseGI GGATG 6 cut(s) 318, 545, 2244, 2713, 3106, 3577
BseJI GATNNNNATC 1 cut(s) 119
BseLI CCNNNNNNNGG 7 cut(s) 1250, 2055, 2144, 2254, 3227, 3459, 3513
BseMI GCAATG 5 cut(s) 924, 2106, 3387, 3431, 3507
BseMII CTCAG 8 cut(s) 254, 1309, 1581, 2979, 3240, 3272, 3468, 3699
BseNI ACTGG 6 cut(s) 325, 1054, 1828, 2522, 3281, 3573
BseRI GAGGAG 5 cut(s) 24, 27, 609, 1415, 3378
BseSI GKGCMC 1 cut(s) 2349
BseYI CCCAGC 1 cut(s) 214
BsgI GTGCAG 4 cut(s) 1148, 2291, 2791, 3125
Bsh1236I CGCG 1 cut(s) 633
BshFI GGCC 5 cut(s) 282, 894, 1120, 2063, 3198
BshNI GGYRCC 1 cut(s) 2390
BsiHKAI GWGCWC 1 cut(s) 2349
BsiHKCI CYCGRG 1 cut(s) 3013
BsiSI CCGG 5 cut(s) 411, 711, 1251, 1924, 2267
BslFI GGGAC 2 cut(s) 452, 2718
BslI CCNNNNNNNGG 7 cut(s) 1250, 2055, 2144, 2254, 3227, 3459, 3513
BsmAI GTCTC 6 cut(s) 252, 307, 963, 1001, 1873, 3111
BsmBI CGTCTC 2 cut(s) 963, 3111
BsmFI GGGAC 2 cut(s) 452, 2718
BsmI GAATGC 1 cut(s) 2664
BsnI GGCC 5 cut(s) 282, 894, 1120, 2063, 3198
Bso31I GGTCTC 2 cut(s) 307, 1001
BsoBI CYCGRG 1 cut(s) 3013
Bsp119I TTCGAA 1 cut(s) 2668
Bsp1286I GDGCHC 2 cut(s) 1417, 2349
Bsp1720I GCTNAGC 2 cut(s) 1862, 2452
Bsp19I CCATGG 1 cut(s) 462
BspACI CCGC 7 cut(s) 513, 633, 1482, 2186, 2376, 2769, 3649
BspANI GGCC 5 cut(s) 282, 894, 1120, 2063, 3198
BspCNI CTCAG 8 cut(s) 253, 1308, 1582, 2978, 3239, 3273, 3467, 3700
BspFNI CGCG 1 cut(s) 633
BspHI TCATGA 1 cut(s) 165
BspLI GGNNCC 7 cut(s) 685, 893, 2104, 2392, 2734, 2940, 3531
BspMAI CTGCAG 1 cut(s) 2116
BspMI ACCTGC 2 cut(s) 289, 2285
BspOI GCTAGC 1 cut(s) 2637
BspPI GGATC 6 cut(s) 865, 1028, 1235, 1748, 2018, 2366
BspQI GCTCTTC 2 cut(s) 1405, 2025
BspT104I TTCGAA 1 cut(s) 2668
BspT107I GGYRCC 1 cut(s) 2390
BspTNI GGTCTC 2 cut(s) 307, 1001
BsrBI CCGCTC 1 cut(s) 2769
BsrDI GCAATG 5 cut(s) 924, 2106, 3387, 3431, 3507
BsrFI RCCGGY 2 cut(s) 1250, 1923
BsrI ACTGG 6 cut(s) 325, 1054, 1828, 2522, 3281, 3573
BssAI RCCGGY 2 cut(s) 1250, 1923
BssECI CCNNGG 5 cut(s) 462, 552, 1458, 2248, 2613
BssT1I CCWWGG 5 cut(s) 462, 552, 1458, 2248, 2613
Bst6I CTCTTC 4 cut(s) 1392, 1405, 2025, 3375
BstAPI GCANNNNNTGC 5 cut(s) 2194, 2651, 3103, 3410, 3572
BstBI TTCGAA 1 cut(s) 2668
BstC8I GCNNGC 7 cut(s) 635, 642, 658, 1425, 2635, 2859, 3028
BstDSI CCRYGG 1 cut(s) 462
BstEII GGTNACC 1 cut(s) 1919
BstF5I GGATG 6 cut(s) 318, 545, 2244, 2713, 3106, 3577
BstFNI CGCG 1 cut(s) 633
BstH2I RGCGCY 2 cut(s) 1581, 2531
BstHHI GCGC 4 cut(s) 1580, 2530, 3566, 3646
BstMAI GTCTC 6 cut(s) 252, 307, 963, 1001, 1873, 3111
BstNSI RCATGY 1 cut(s) 3074
BstPAI GACNNNNGTC 2 cut(s) 173, 3228
BstPI GGTNACC 1 cut(s) 1919
BstSFI CTRYAG 4 cut(s) 663, 1647, 1787, 2112
BstSLI GKGCMC 1 cut(s) 2349
BstUI CGCG 1 cut(s) 633
BstV2I GAAGAC 3 cut(s) 169, 2211, 2403
BstX2I RGATCY 2 cut(s) 1131, 1753
BstYI RGATCY 2 cut(s) 1131, 1753
BsuI GTATCC 1 cut(s) 1119
BsuRI GGCC 5 cut(s) 282, 894, 1120, 2063, 3198
BtgI CCRYGG 1 cut(s) 462
BtgZI GCGATG 2 cut(s) 1646, 3036
BtsCI GGATG 6 cut(s) 318, 545, 2244, 2713, 3106, 3577
BtsI GCAGTG 2 cut(s) 1704, 3181
BtsIMutI CAGTG 5 cut(s) 1704, 3181, 3195, 3566, 3741
BveI ACCTGC 2 cut(s) 289, 2285
Cac8I GCNNGC 7 cut(s) 635, 642, 658, 1425, 2635, 2859, 3028
CaiI CAGNNNCTG 2 cut(s) 656, 748
CciI TCATGA 1 cut(s) 165
CfoI GCGC 4 cut(s) 1580, 2530, 3566, 3646
Cfr10I RCCGGY 2 cut(s) 1250, 1923
Cfr13I GGNCC 4 cut(s) 892, 2732, 3339, 3529
CseI GACGC 1 cut(s) 178
CspCI CAANNNNNGTGG 4 cut(s) 778, 813, 1680, 1715
DraI TTTAAA 1 cut(s) 2983
DrdI GACNNNNNNGTC 1 cut(s) 955
DseDI GACNNNNNNGTC 1 cut(s) 955
EaeI YGGCCR 1 cut(s) 2061
Eam1104I CTCTTC 4 cut(s) 1392, 1405, 2025, 3375
EarI CTCTTC 4 cut(s) 1392, 1405, 2025, 3375
EciI GGCGGA 1 cut(s) 1497
Eco130I CCWWGG 5 cut(s) 462, 552, 1458, 2248, 2613
Eco147I AGGCCT 1 cut(s) 282
Eco24I GRGCYC 1 cut(s) 1417
Eco31I GGTCTC 2 cut(s) 307, 1001
Eco47I GGWCC 3 cut(s) 2732, 3339, 3529
Eco47III AGCGCT 2 cut(s) 1579, 2529
Eco57I CTGAAG 3 cut(s) 2004, 2049, 3396
Eco88I CYCGRG 1 cut(s) 3013
Eco91I GGTNACC 1 cut(s) 1919
EcoO109I RGGNCCY 2 cut(s) 2732, 3529
EcoO65I GGTNACC 1 cut(s) 1919
EcoRI GAATTC 2 cut(s) 342, 1551
EcoT14I CCWWGG 5 cut(s) 462, 552, 1458, 2248, 2613
EcoT22I ATGCAT 3 cut(s) 970, 2818, 3760
EcoT38I GRGCYC 1 cut(s) 1417
ErhI CCWWGG 5 cut(s) 462, 552, 1458, 2248, 2613
Esp3I CGTCTC 2 cut(s) 963, 3111
FalI AAGNNNNNCTT 8 cut(s) 528, 560, 1602, 1634, 2395, 2427, 2559, 2591
FaqI GGGAC 2 cut(s) 452, 2718
FauI CCCGC 2 cut(s) 626, 2383
FauNDI CATATG 3 cut(s) 848, 1375, 3445
FbaI TGATCA 2 cut(s) 46, 117
FblI GTMKAC 1 cut(s) 3185
FokI GGATG 6 cut(s) 325, 552, 2251, 2720, 3113, 3584
FriOI GRGCYC 1 cut(s) 1417
FspI TGCGCA 1 cut(s) 3645
GlaI GCGC 4 cut(s) 1579, 2529, 3565, 3645
GsaI CCCAGC 1 cut(s) 218
GsuI CTGGAG 4 cut(s) 612, 1071, 2244, 3504
HaeII RGCGCY 2 cut(s) 1581, 2531
HaeIII GGCC 5 cut(s) 282, 894, 1120, 2063, 3198
HapII CCGG 5 cut(s) 411, 711, 1251, 1924, 2267
HgaI GACGC 1 cut(s) 178
HhaI GCGC 4 cut(s) 1580, 2530, 3566, 3646
Hin6I GCGC 4 cut(s) 1578, 2528, 3564, 3644
HinP1I GCGC 4 cut(s) 1578, 2528, 3564, 3644
HincII GTYRAC 3 cut(s) 627, 1209, 3186
HindII GTYRAC 3 cut(s) 627, 1209, 3186
HpaII CCGG 5 cut(s) 411, 711, 1251, 1924, 2267
HphI GGTGA 7 cut(s) 328, 541, 945, 1265, 2456, 2713, 3631
Hpy166II GTNNAC 7 cut(s) 627, 1209, 1502, 1932, 2347, 3186, 3236
Hpy8I GTNNAC 7 cut(s) 627, 1209, 1502, 1932, 2347, 3186, 3236
Hpy99I CGWCG 2 cut(s) 1568, 1742
HpyAV CCTTC 8 cut(s) 712, 1754, 1787, 1988, 2425, 2692, 2723, 3706
HpyCH4IV ACGT 2 cut(s) 110, 3120
HpySE526I ACGT 2 cut(s) 110, 3120
HspAI GCGC 4 cut(s) 1578, 2528, 3564, 3644
Ksp22I TGATCA 2 cut(s) 46, 117
LguI GCTCTTC 2 cut(s) 1405, 2025
LmnI GCTCC 8 cut(s) 203, 498, 683, 1763, 1796, 2102, 2834, 2944
MaeII ACGT 2 cut(s) 110, 3120
MaeIII GTNAC 5 cut(s) 316, 1919, 1978, 2444, 3370
MbiI CCGCTC 1 cut(s) 2769
MfeI CAATTG 3 cut(s) 579, 1521, 2655
MflI RGATCY 2 cut(s) 1131, 1753
MhlI GDGCHC 2 cut(s) 1417, 2349
MlsI TGGCCA 1 cut(s) 2063
MluNI TGGCCA 1 cut(s) 2063
MlyI GAGTC 9 cut(s) 606, 1281, 1601, 2201, 2939, 2957, 3005, 3218, 3587
MmeI TCCRAC 6 cut(s) 290, 661, 778, 2973, 3142, 3561
Mox20I TGGCCA 1 cut(s) 2063
Mph1103I ATGCAT 3 cut(s) 970, 2818, 3760
MroXI GAANNNNTTC 3 cut(s) 2279, 3315, 3333
MscI TGGCCA 1 cut(s) 2063
MslI CAYNNNNRTG 2 cut(s) 113, 2171
Msp20I TGGCCA 1 cut(s) 2063
MspA1I CMGCKG 1 cut(s) 2117
MspI CCGG 5 cut(s) 411, 711, 1251, 1924, 2267
MunI CAATTG 3 cut(s) 579, 1521, 2655
Mva1269I GAATGC 1 cut(s) 2664
MvnI CGCG 1 cut(s) 633
NcoI CCATGG 1 cut(s) 462
NdeI CATATG 3 cut(s) 848, 1375, 3445
NheI GCTAGC 1 cut(s) 2633
NlaIV GGNNCC 7 cut(s) 685, 893, 2104, 2392, 2734, 2940, 3531
NmeAIII GCCGAG 2 cut(s) 489, 2885
NmuCI GTSAC 3 cut(s) 316, 1978, 2444
NsbI TGCGCA 1 cut(s) 3645
NsiI ATGCAT 3 cut(s) 970, 2818, 3760
NspI RCATGY 1 cut(s) 3074
NspV TTCGAA 1 cut(s) 2668
PaeR7I CTCGAG 1 cut(s) 3013
PagI TCATGA 1 cut(s) 165
PaqCI CACCTGC 1 cut(s) 2285
PceI AGGCCT 1 cut(s) 282
PciI ACATGT 1 cut(s) 3070
PciSI GCTCTTC 2 cut(s) 1405, 2025
PcsI WCGNNNNNNNCGW 1 cut(s) 637
PctI GAATGC 1 cut(s) 2664
PdmI GAANNNNTTC 3 cut(s) 2279, 3315, 3333
PfeI GAWTC 5 cut(s) 1143, 1817, 2924, 3210, 3329
PleI GAGTC 9 cut(s) 605, 1280, 1600, 2201, 2939, 2957, 3005, 3218, 3586
PpsI GAGTC 9 cut(s) 605, 1280, 1600, 2201, 2939, 2957, 3005, 3218, 3586
PpuMI RGGWCCY 2 cut(s) 2732, 3529
PscI ACATGT 1 cut(s) 3070
PshAI GACNNNNGTC 2 cut(s) 173, 3228
PshBI ATTAAT 2 cut(s) 1628, 2819
Psp5II RGGWCCY 2 cut(s) 2732, 3529
PspEI GGTNACC 1 cut(s) 1919
PspFI CCCAGC 1 cut(s) 214
PspN4I GGNNCC 7 cut(s) 685, 893, 2104, 2392, 2734, 2940, 3531
PspPI GGNCC 4 cut(s) 892, 2732, 3339, 3529
PspPPI RGGWCCY 2 cut(s) 2732, 3529
PspXI VCTCGAGB 1 cut(s) 3013
PsrI GAACNNNNNNTAC 2 cut(s) 3576, 3608
PstI CTGCAG 1 cut(s) 2116
PstNI CAGNNNCTG 2 cut(s) 656, 748
PsuI RGATCY 2 cut(s) 1131, 1753
PvuII CAGCTG 1 cut(s) 2117
RseI CAYNNNNRTG 2 cut(s) 113, 2171
SalI GTCGAC 1 cut(s) 3184
SapI GCTCTTC 2 cut(s) 1405, 2025
Sau96I GGNCC 4 cut(s) 892, 2732, 3339, 3529
ScaI AGTACT 1 cut(s) 2574
SchI GAGTC 9 cut(s) 606, 1281, 1601, 2201, 2939, 2957, 3005, 3218, 3587
SduI GDGCHC 2 cut(s) 1417, 2349
SfcI CTRYAG 4 cut(s) 663, 1647, 1787, 2112
Sfr274I CTCGAG 1 cut(s) 3013
SfuI TTCGAA 1 cut(s) 2668
SinI GGWCC 3 cut(s) 2732, 3339, 3529
SlaI CTCGAG 1 cut(s) 3013
SmiMI CAYNNNNRTG 2 cut(s) 113, 2171
SmlI CTYRAG 3 cut(s) 1004, 3013, 3438
SmoI CTYRAG 3 cut(s) 1004, 3013, 3438
SseBI AGGCCT 1 cut(s) 282
SsiI CCGC 7 cut(s) 513, 633, 1482, 2186, 2376, 2769, 3649
SspI AATATT 2 cut(s) 2979, 3346
StuI AGGCCT 1 cut(s) 282
StyI CCWWGG 5 cut(s) 462, 552, 1458, 2248, 2613
TaiI ACGT 2 cut(s) 113, 3123
TatI WGTACW 5 cut(s) 261, 354, 2572, 3235, 3592
TfiI GAWTC 5 cut(s) 1143, 1817, 2924, 3210, 3329
TscAI CASTG 5 cut(s) 1704, 3181, 3195, 3573, 3748
TseFI GTSAC 3 cut(s) 316, 1978, 2444
Tsp45I GTSAC 3 cut(s) 316, 1978, 2444
TspRI CASTG 5 cut(s) 1704, 3181, 3195, 3573, 3748
VneI GTGCAC 1 cut(s) 2345
VpaK11BI GGWCC 3 cut(s) 2732, 3339, 3529
VspI ATTAAT 2 cut(s) 1628, 2819
XapI RAATTY 9 cut(s) 342, 1551, 2275, 2316, 2380, 2585, 2864, 2985, 3537
XbaI TCTAGA 2 cut(s) 1582, 1828
XceI RCATGY 1 cut(s) 3074
XcmI CCANNNNNNNNNTGG 1 cut(s) 2056
XhoI CTCGAG 1 cut(s) 3013
XmiI GTMKAC 1 cut(s) 3185
XmnI GAANNNNTTC 3 cut(s) 2279, 3315, 3333
ZrmI AGTACT 1 cut(s) 2574
Zsp2I ATGCAT 3 cut(s) 970, 2818, 3760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.