Rorug03G0139600

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
11479431 .. 11489737
10307 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0139600.1

Sequence Viewer

Length: 6288 bp
ATGTCTACCATGGATATCGATTCCCCTTCTGAATCTCCCCCTCGTGATCGAATCGTTCAGAGGCTTACTCTACTGGGAGTGCCTCAGAATCTTCTTCATCTGCATCAACTTGGTTTAGTTGCCTATGTTAAAAATAACAAGCAGTTGTTACCGCGACTGGTTTCTGCTATCTTACCTCCTGATGAGGAAGTAGCGGAAGTTCTCCGCGAGGCCAAACCAGGGTCGAAGAAACAATCAGCCGGTGTCACCATGAAACTTCAATTCCGCGAAAGCATCTCGTGGCTGAAGTGGTTGATGTTTGAGAGTGACCCTGGCTTGGTTCTGAAGGGCCTGTCCAAAATGAGTGTCGGGCAGCGGGGCATTTGTGGAGCCGTTTGGGGACATAATGATATAGCCTTCAGGTGCAAGACATGCGAACATGATCCAACCTGTGCAATTTGCGTTCCGTGTTTTAAGAATGGGAACCACAAGGATCATGATTACTCTATTATCTATACCGGCGGTGGCTGTTGTGATTGCGGTGATGTTACAGCATGGAAACGCCAAGGCTTTTGCTCAAAGCATAAAGGTGCAGAACAGATACAGCCCCTTCCAGAGGAGCTTGCAGTCACCGTGGGGCCTGTTCTTCACTGCCTCTTTGCCTATATGAAGAACAAGCTACTACTTTCTGAAACTGCCTGCCGGGAAAACCCTAGGGTAACTGACCTTGCTGCAGAGCGTAAGAAGGTTGCAAATGAGCTAACCTATTTTGTGGTTGAGATGCTTCTGGACTTTTGCAAGTGCAGTGAGAGTTTGCTTAGCTTTGTATCGAAGATGATTTTATCATCAGTTGACTTTTTGGGGATTTTGGTGAGGGCAGAGAGGTTTTTGAGTGATGCTGTTGTGAAAAAGCTCCATGAGTTGCTCCTGAAATTGATGGGGGAGCCTGTTTTCAAATATGAGTTTGCCAAAGTATTTCTTAATTATTACCCAACTGTTGTTAGTGAAGCCATCAAGGAGTTCACTGACCTTACTTTGAAAAAGTATCCGCTGCTCTCTATATTCTCTGTGCAAATCTTCACGGTGCCAACTCTAACACCCCGTCTTGTGAAAGAAATGAACCTACTGTCGATGCTGTTAGGATGTTTGGAAGATATTTTCAATTCCTGTGCTGGTGAAGACGGCCGTTTACAGGTTACCAAGTGGTCAAATTTGTATGACGTCACTATTCGTGTGATTGAAGATTTTCGGTTTGTTATGAGTCATGCTATAGTGCCAAAATACGTAACTCATGAGCAGCAAGATATTGCGAGAACTTGGATGAGACTCTCAGCTTTTGTGCAAGGGATGAACCCACAAAAGAGGGAGACAGGCCTCCATATTGAAGAAGAGAATGACAATATGCATTTGCCATTCGTTCTGGGTCATTCAATTGCCAACCTTCATTCTTTGTTGGTGGATGGAGCATTTTCTGTTGCTAGTGACAAGACAGGAGAAGACTTATTTCTCGGCACAAATAAGCAAGATATGGATGACACAGATAGCCTAAGACATGCAAAAGTAGGACGGCTGTCCCAGGAAAGTTCTGCATGTAGTGCAATGGCGAGTAGTTCATTTGCATGTGCATTGACATTTTCTGAAGATAAATCAAATACTCTTTCGACGATACCATCATCTGTGGTATGGTTAACATTTGAGTGTTTGAGGGCTATTGAGAATTGGCTGGGAGTTGATAACACTTCGGGTACAATTCTTCATGTATCATCTTCAAGTACTAGCAATTTCTCTGGGAGCAATTTTTCAGCATTGAAGAGAACATTGTCCAAAATTAGGAAAGGCAAAAACATTTTTGGTAGATTTGCCAGTTCAAGTGAAGACCATGGGAAGCATAGTTCATCACATTTACTTAGTAGTTCTGATATGAGTGTTGACTTCCAGAATGGCAAAATTTCAGAAAATAAATTAATGGTTATGGACGAAATCGATCAAGCTAATGCCTGTAATTCGTCAGGATCTGGTGATAGTGCAATGGAAATAGATGGTCCCATGGACTTAGATGCTCTACGCGTGCTGAGTTCGTCCGACTGGCCAGACATAACATATGATGTTAGTTCGCAGGATATATCTGTTCACATTCCCTTACATCGCTTACTTGCGTTGCTTCTACAGAGATCATTAAGAAGGTGTTTTGGCGAAGTGCCAGATTCTGTTAGAGCTAGTTCTGCAAATTTATCATCATCTATTTCCACAGACTTTTTTGGAAATATTCTTGGAGGCTGCCACCCATGTGGATTTTCTGCCTTTGTTATGGAGCATCCCCTTCGTATAAGAGTATTTTGTGCTGAGGTTCACGCTGGAATGTGGCGGAAGAATGGGGATGCTGCCCCATTAACTTGTGAGTGGTATCGTTCAGTTCGCTGGTCGGAACAGTTTGTGGAGCTTGATCTATTTCTGCTTCAGTGCTGTGCTGCCTTGGCTCCAGCTGATCTTTATATCAAGAGAATCATAGAACGCTTTGGCCTGTCAAGCTACCTTTCTCTGAACCTTGAGCGCTCTAGTGAATATGAACCAGTTCTAGTGCAGGAAATGCTCACTCTTATTATACAAATAATCAAAGAAAGGCGATTCTGTGGGTTAACTAAAGCTGAAAGTGTGAAAAGAGAATTGATTCATAAGTTAAGCATCGCAGATGCTACTCACAGTCAATTGGTTAAGTCTCTTCCTCGTGATCTTACCAAGTATGACCAGCTTAATGAAATTTTGGATACAGTTGCTGTGTATTCCAATCCCTCTGGCTTTAACCAGGGGACTTATTCACTACAATGGACATTTTGGGAAGAACTGGATTTGTACTACCATCGTTGGAACTCAAGGGATCTACAAGCTGCAGAAGAAAGATACTTACGTTTCCGTAGTGTTTCTGCATTGACCAATCAGCTACCCAGGTGGACTAAGATTTATCCTCCTTTCAGAGGGTTAGCTAGAATTGGGACTTGTAAAACCGTCCTCCAAATTGTTCGCGCGGTGCTGTTTTATGCTGTATTTTCTGATAAATCGGTTGAGTCGCGAGCGCCTGATGGGGTCCTCTTAACTGCTTTGCACTTGCTCTCATTAGCATTAGACATTTGTTCTCAACATAAAGAATCCGGTGATCATTCCTGTTATGATGGAGATTTCATTCCAGTGCTTGCTTTTGCCTGTGAAGAAATTAATGAAGGACTCTATTTTGAGGCTGGTCAACAAAGCTTGTTGTCACTTCTTGTTATTTTGATGAGGATGTATTCGAAAGAGGGTTTAGATAATTCAGAAGATGGAAGTTGCAACCTTTCTTCTTTAATCGGAAACTTACTGAAGAAGTTTGCATTTATTGATTGTGAATGTATGACCAAACTGCAGGTACTTGCACCTGAGTTGGTTAGTCATGTAACTTTTCCAAATAGTGATACAGTTACCTCAGGTTCAGCTTCTGATTCTGAGAAGCGAAAGGCAAAAGCCAGAGAGAGACAGGCTGCCATACTGGAAAAAATGAGAGCCGAGCAATCAAAGTTTTTGAGTAGTATTGATTCCTCTGTGGATGATGGTTCAGAAGCTGAACAAAAGGATGTTGAATCTGATCTTGAAGATAACTCAGAAGAGCCTGCACAAGTTGTTTGCTCACTCTGCCATGATCCGAATTCCAAGAATCCTATTTCCTTCTTGGTTCTTCTTCAAAAGTCCAGGCTTTTGAGTTTCATTGATAGAGGTCCACTATCATGGGGACAACCTCGCTCCGTAGACAAGGAGCATGTTGTTAAAACCAAAGATGAGGTGATTGATCAATCTGGTATAAGCAGATTGTTTAGTGGTTCAGGATTTGTTTCATCGTCTCATGTAAGACAGTTGGTGTCGGAACACTACAACAGAAAAAAGGTGACTGGTGAATCTGGAACAAGTACACTGTCAAGTGGTTCAGGAGTGGTGTCGCCTCATCATCTAAGGCAGTTGGTTGAGAAGGCAGTCACTGAGTTTGCCCGACATGGGAGACCTAGGGATGTTGATGCCTTTCTAGAAGTTCTGAAGGGCCGGTTTCATGACTTAAGGAATTTCCAAGTGCCATGTGAATCAAATGATGAAAGGGAGAGTACTTTATATGCCTTTGAGACAATGGAAGAAGATATGTACTTCTCTATCCGAAGAGAACTGCACGATAAACTGCATTCTAAACTTACAGAAGATAAGAAGTGTACAACTGCTGAAGGGGATCGAGAGAATACAGAGCATACTGAATTTATGTTACTTGGAAACTATATAGCTGCTCTTTCTAGAGAGAGAAGAGAAGATCCTTCATCTTCTGAAAGTGATCCTAATGATAAGGGGCCAGTAGAATGTTCTCGCCTGTCAGCATATGATGGATTTGGCCCTGCAGATTGTGATGGAATTTATATTTCTTCCTGTGGGCATGCTGTGCATCAGGACTGTCTTGATCGTTATTTGTCTTCCCTGAAGGAAAGGTATCTCAGGAGAATTGTTTTTGAAGGAGGACATATTGTAGATCCAGACAAGGGTGAATTTCTTTGCCCTGTATGCCGTCGACTTGCAAATTCAGTCTTGCCTACATTACCAAGTGAGTTCCAGAAGGTTCGCAAAGAGCCTATGGATACAGGTGTTAGTTCATCACGTGTTACTAGTCCATCATGCAAACCAGGCGAAGGAATTAGTTCTTTTCAGCAAGGCTTGGCTCTCTTGCAATCTGCAGCAAATGCAGCTGGGAAGGTTGGCACGCTCAAAGGTTTCCCCCTGCATAGATGTGAACAAATGAGCTCAAATCTTGAACCAATCTCACGTCTGCTATCTAAGATGTATTTCCCAACTGATCTGGATAAGATATCAGGATCTGACAGGGTCAGCCACCCAATGCTTATGTGGGACTTAATTAAGTACTCTCTACTGTCAATGGAGATTGCTTCTCGTTCTGGGGGGAAATATGCAGCACCAAGCTACAGCCTTAATGCCTTGTATAAGGAACTTGAATCCTCGAGCAGATTCATATTGTCCTTGTTGCTGAAACTTGTCCAAAACACGTGCAAGAATTCTCTTCATGTGCTTCAGAGATTTATAGCAATTCAGAGCTTTGCAGAATCTACATGCTTTGGAGTTTCCATAGATCATGGAAGCAAAACATCAGGACAAGTTGTTATGCTGCGTATCTTGGAACATGTTGATAATCCAGTAGCATATCCTGATTTCCAGTTCTGGAATCGAGCTTCTGATCCTGTGCTTGCCCGTGATCCTTTTTCTTCATTGATGTGGGTTCTATTTTGTCTTCCATACCGATTTTTATCATGTGAAGATTCCTTGCTATCCCTGGTGCACATTTTTTATGTTGTTTCTGTGGTTCAGGGTATTGCTACATATTTTGGGAAAAATCAATGCGACATTAGTGGATTAGGTGTTGGTGATTGCCTGATTACTGACATCAGCAAGCTTATGAGTGAATTTGGATCCGCTCGGCAATATTTTGTATCAAACTATATAGACTCTTCTTCTAATATTAAGAATATAGTTCGTACCTTGACTTTCCCTTATTTGCGGAGGTGTGCATTGTTGTTGAAGCTACTCGAATCCTATGCCCAAGCGCCATTTTGTGAAAGGTATAATGCGTTGGATAGATCACGTGCCACTAGTGACACAATGGATACCACTTATGTGCCACTGGTCGAGCTCAATGAAATTCAAGAGATAGAAACCCTGCTCAGGATTCCTACTTTGGATGTTATTCTTAAGGATGAAGTGGTGCGTTCATTAGCTCATAAATGGTTCTGTCATTTTGGCAAAGACTTTGAGGACGAAAGGTTTCAAGGCAGTATACACTGCAACCCTGCAGTTCCATTCCAGTTGATGCGTCTGCCCCGAGTTTACCAGGATCTATTGCAGCGGTATATAAAGCAGCGGTGTCGTGACTGCAATAACATACTTGATGAACCTGCACTGTGCCTACTTTGTGGTAGGTTATGCTCTCCAAGCTGGAAGTCATGCTGCAGGGAAAGTGGATGCCAAACTCATGCAGTGGCTTGTGGTTCTGGTACTGGTGTCTTTCTGTTGATCAGGAGAACAACAATACTGCTGCAAAGATCTGCGCGGCAGGCTCCTTGGCCATCACCCTACTTGGATGCTTTTGGTGAAGAGGACATTGAAATGCAGAGAGGAAAGCCACTGTTCTTGAATGAGGAACGTTATGCAGCTTTAACTTATTTGGTTGCTTCTCATGGCCTTGATCGAAGTTCGAAGGTTCTTGGGCAAACTACTATTGGTTCTTTCTTCATGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

2095

Amino Acids

234.79

Weight (kDa)

6.09

Isoelectric Point (pI)

49.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-UBR PF02207 122 - 188 2.6e-19 Putative zinc finger in N-recognin (UBR box)
WHD_UBR1 PF22960 878 - 964 4e-20 E3 ubiquitin-protein ligase UBR1-like, winged-helix domain
PRT6_C PF18995 1604 - 2073 1.7e-93 Proteolysis_6 C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1203
Acc36I ACCTGC 2 cut(s) 3364, 5950
AccB1I GGYRCC 1 cut(s) 1063
AccBSI CCGCTC 1 cut(s) 5465
AccI GTMKAC 4 cut(s) 5, 3753, 4549, 5824
AccII CGCG 8 cut(s) 154, 207, 267, 2046, 3000, 3002, 3046, 6097
AclI AACGTT 1 cut(s) 6190
AcoI YGGCCR 3 cut(s) 1162, 2066, 6110
AcvI CACGTG 3 cut(s) 4637, 5040, 5633
AcyI GRCGYC 1 cut(s) 1200
AfeI AGCGCT 1 cut(s) 2531
AflII CTTAAG 2 cut(s) 4054, 5738
AflIII ACRYGT 4 cut(s) 2044, 4636, 5037, 5173
AhlI ACTAGT 2 cut(s) 4643, 5639
AjiI CACGTC 1 cut(s) 4802
AjnI CCWGG 9 cut(s) 217, 310, 1554, 2781, 2921, 3695, 4660, 5322, 5877
AleI CACNNNNGTG 2 cut(s) 2265, 5663
AloI GAACNNNNNNTCC 2 cut(s) 1855, 1887
Alw21I GWGCWC 3 cut(s) 4781, 5331, 5682
Alw26I GTCTC 7 cut(s) 1297, 1340, 2700, 3475, 3849, 3994, 4112
Alw44I GTGCAC 1 cut(s) 5327
AlwNI CAGNNNCTG 7 cut(s) 1994, 2186, 2753, 3446, 3569, 3980, 4853
Ama87I CYCGRG 2 cut(s) 4993, 5868
Aor51HI AGCGCT 1 cut(s) 2531
ApaLI GTGCAC 1 cut(s) 5327
ArsI GACNNNNNNTTYG 2 cut(s) 330, 362
AseI ATTAAT 2 cut(s) 1943, 3189
Asp700I GAANNNNTTC 5 cut(s) 1224, 2550, 2646, 4675, 5811
AspA2I CCTAGG 2 cut(s) 692, 4004
AspLEI GCGC 5 cut(s) 2532, 3002, 3052, 5596, 6097
AspS9I GGNCC 8 cut(s) 328, 617, 2021, 3061, 3722, 4039, 4334, 4376
AsuC2I CCSGG 1 cut(s) 683
AsuII TTCGAA 2 cut(s) 3263, 6242
AvaI CYCGRG 2 cut(s) 4993, 5868
AvaII GGWCC 3 cut(s) 2021, 3061, 3722
AvrII CCTAGG 2 cut(s) 692, 4004
AxyI CCTNAGG 1 cut(s) 3433
BaeGI GKGCMC 1 cut(s) 5331
BaeI ACNNNNGTAYC 6 cut(s) 2869, 2902, 4608, 4641, 6033, 6066
BalI TGGCCA 2 cut(s) 2068, 6112
BamHI GGATCC 1 cut(s) 5459
BanI GGYRCC 1 cut(s) 1063
BanII GRGCYC 2 cut(s) 4781, 5682
BauI CACGAG 3 cut(s) 42, 277, 2703
BbrPI CACGTG 3 cut(s) 4637, 5040, 5633
BbsI GAAGAC 5 cut(s) 1164, 1482, 1860, 4446, 5273
Bbv12I GWGCWC 3 cut(s) 4781, 5331, 5682
BbvCI CCTCAGC 1 cut(s) 2322
BceAI ACGGC 5 cut(s) 356, 1149, 1177, 1562, 4530
BcgI CGANNNNNNTGC 6 cut(s) 2282, 2316, 5567, 5601, 5894, 5928
BciT130I CCWGG 9 cut(s) 219, 312, 1556, 2783, 2923, 3697, 4662, 5324, 5879
BciVI GTATCC 4 cut(s) 1035, 2737, 4609, 5647
BclI TGATCA 3 cut(s) 3130, 3793, 6060
BcnI CCSGG 1 cut(s) 683
BcoDI GTCTC 7 cut(s) 1297, 1340, 2700, 3475, 3849, 3994, 4112
BcuI ACTAGT 2 cut(s) 4643, 5639
BfoI RGCGCY 3 cut(s) 2533, 3053, 5597
BfrI CTTAAG 2 cut(s) 4054, 5738
BfuAI ACCTGC 2 cut(s) 3364, 5950
BfuI GTATCC 4 cut(s) 1035, 2737, 4609, 5647
BglII AGATCT 1 cut(s) 6089
BlnI CCTAGG 2 cut(s) 692, 4004
BlpI GCTNAGC 1 cut(s) 797
BmcAI AGTACT 3 cut(s) 1753, 4102, 4898
Bme18I GGWCC 3 cut(s) 2021, 3061, 3722
BmeT110I CYCGRG 2 cut(s) 4993, 5868
BmgBI CACGTC 1 cut(s) 4802
BmgT120I GGNCC 8 cut(s) 328, 617, 2021, 3061, 3722, 4039, 4334, 4376
BmrI ACTGGG 1 cut(s) 83
BmuI ACTGGG 1 cut(s) 83
BoxI GACNNNNGTC 1 cut(s) 1549
BpiI GAAGAC 5 cut(s) 1164, 1482, 1860, 4446, 5273
BplI GAGNNNNNCTC 2 cut(s) 52, 84
BpmI CTGGAG 1 cut(s) 2442
Bpu10I CCTNAGC 2 cut(s) 2322, 5711
Bpu1102I GCTNAGC 1 cut(s) 797
Bpu14I TTCGAA 2 cut(s) 3263, 6242
BpuEI CTTGAG 2 cut(s) 2546, 2833
BpuMI CCSGG 1 cut(s) 683
Bsa29I ATCGAT 2 cut(s) 18, 1962
BsaAI YACGTR 4 cut(s) 1264, 4637, 5040, 5633
BsaBI GATNNNNATC 1 cut(s) 5296
BsaHI GRCGYC 1 cut(s) 1200
BsaI GGTCTC 1 cut(s) 3994
BsaWI WCCGGW 1 cut(s) 3125
Bse118I RCCGGY 3 cut(s) 239, 497, 4041
Bse21I CCTNAGG 1 cut(s) 3433
Bse3DI GCAATG 2 cut(s) 1584, 2013
Bse8I GATNNNNATC 1 cut(s) 5296
BseBI CCWGG 9 cut(s) 219, 312, 1556, 2783, 2923, 3697, 4662, 5324, 5879
BseCI ATCGAT 2 cut(s) 18, 1962
BseJI GATNNNNATC 1 cut(s) 5296
BseMI GCAATG 2 cut(s) 1584, 2013
BseRI GAGGAG 1 cut(s) 611
BseSI GKGCMC 1 cut(s) 5331
BseX3I CGGCCG 1 cut(s) 1162
BseYI CCCAGC 2 cut(s) 1702, 4724
BsgI GTGCAG 6 cut(s) 591, 802, 2579, 3603, 4145, 5928
Bsh1236I CGCG 8 cut(s) 154, 207, 267, 2046, 3000, 3002, 3046, 6097
Bsh1285I CGRYCG 1 cut(s) 1165
BshNI GGYRCC 1 cut(s) 1063
BshVI ATCGAT 2 cut(s) 18, 1962
BsiEI CGRYCG 1 cut(s) 1165
BsiHKAI GWGCWC 3 cut(s) 4781, 5331, 5682
BsiHKCI CYCGRG 2 cut(s) 4993, 5868
BsiSI CCGG 5 cut(s) 240, 498, 682, 3126, 4042
BslFI GGGAC 7 cut(s) 393, 1537, 2007, 2800, 2983, 3750, 4898
BsmAI GTCTC 7 cut(s) 1297, 1340, 2700, 3475, 3849, 3994, 4112
BsmBI CGTCTC 1 cut(s) 3849
BsmFI GGGAC 7 cut(s) 393, 1537, 2007, 2800, 2983, 3750, 4898
BsmI GAATGC 1 cut(s) 4174
Bso31I GGTCTC 1 cut(s) 3994
BsoBI CYCGRG 2 cut(s) 4993, 5868
Bsp119I TTCGAA 2 cut(s) 3263, 6242
Bsp1286I GDGCHC 3 cut(s) 4781, 5331, 5682
Bsp1407I TGTACA 1 cut(s) 4202
Bsp1720I GCTNAGC 1 cut(s) 797
Bsp19I CCATGG 3 cut(s) 9, 1858, 2025
Bsp68I TCGCGA 1 cut(s) 3046
BspDI ATCGAT 2 cut(s) 18, 1962
BspFNI CGCG 8 cut(s) 154, 207, 267, 2046, 3000, 3002, 3046, 6097
BspHI TCATGA 3 cut(s) 475, 1270, 4048
BspMAI CTGCAG 7 cut(s) 715, 2869, 3375, 4384, 4714, 5842, 5999
BspMI ACCTGC 2 cut(s) 3364, 5950
BspQI GCTCTTC 1 cut(s) 3606
BspT104I TTCGAA 2 cut(s) 3263, 6242
BspT107I GGYRCC 1 cut(s) 1063
BspTI CTTAAG 2 cut(s) 4054, 5738
BspTNI GGTCTC 1 cut(s) 3994
BsrBI CCGCTC 1 cut(s) 5465
BsrDI GCAATG 2 cut(s) 1584, 2013
BsrFI RCCGGY 3 cut(s) 239, 497, 4041
BsrGI TGTACA 1 cut(s) 4202
BssAI RCCGGY 3 cut(s) 239, 497, 4041
BssNAI GTATAC 1 cut(s) 5825
BssNI GRCGYC 1 cut(s) 1200
BssSI CACGAG 3 cut(s) 42, 277, 2703
BssT1I CCWWGG 8 cut(s) 9, 544, 692, 1858, 2025, 2451, 4004, 6107
Bst1107I GTATAC 1 cut(s) 5825
Bst2BI CACGAG 3 cut(s) 42, 277, 2703
Bst2UI CCWGG 9 cut(s) 219, 312, 1556, 2783, 2923, 3697, 4662, 5324, 5879
Bst6I CTCTTC 9 cut(s) 1362, 1784, 2703, 3606, 4147, 4285, 5058, 5503, 6135
BstACI GRCGYC 1 cut(s) 1200
BstAFI CTTAAG 2 cut(s) 4054, 5738
BstAPI GCANNNNNTGC 5 cut(s) 411, 1574, 2566, 4423, 4718
BstAUI TGTACA 1 cut(s) 4202
BstBAI YACGTR 4 cut(s) 1264, 4637, 5040, 5633
BstBI TTCGAA 2 cut(s) 3263, 6242
BstDSI CCRYGG 4 cut(s) 9, 612, 1858, 2025
BstEII GGTNACC 1 cut(s) 1174
BstENI CCTNNNNNAGG 2 cut(s) 593, 2949
BstFNI CGCG 8 cut(s) 154, 207, 267, 2046, 3000, 3002, 3046, 6097
BstH2I RGCGCY 3 cut(s) 2533, 3053, 5597
BstHHI GCGC 5 cut(s) 2532, 3002, 3052, 5596, 6097
BstMAI GTCTC 7 cut(s) 1297, 1340, 2700, 3475, 3849, 3994, 4112
BstMCI CGRYCG 1 cut(s) 1165
BstNI CCWGG 9 cut(s) 219, 312, 1556, 2783, 2923, 3697, 4662, 5324, 5879
BstNSI RCATGY 8 cut(s) 414, 1535, 1572, 1602, 3767, 4421, 5106, 5177
BstPAI GACNNNNGTC 1 cut(s) 1549
BstPI GGTNACC 1 cut(s) 1174
BstSLI GKGCMC 1 cut(s) 5331
BstSNI TACGTA 1 cut(s) 1264
BstUI CGCG 8 cut(s) 154, 207, 267, 2046, 3000, 3002, 3046, 6097
BstV2I GAAGAC 5 cut(s) 1164, 1482, 1860, 4446, 5273
BstX2I RGATCY 8 cut(s) 1991, 2854, 4297, 4510, 4850, 5459, 5881, 6089
BstXI CCANNNNNNTGG 2 cut(s) 2267, 3732
BstYI RGATCY 8 cut(s) 1991, 2854, 4297, 4510, 4850, 5459, 5881, 6089
BstZ17I GTATAC 1 cut(s) 5825
BstZI CGGCCG 1 cut(s) 1162
Bsu15I ATCGAT 2 cut(s) 18, 1962
Bsu36I CCTNAGG 1 cut(s) 3433
BsuI GTATCC 4 cut(s) 1035, 2737, 4609, 5647
BsuTUI ATCGAT 2 cut(s) 18, 1962
BtgI CCRYGG 4 cut(s) 9, 612, 1858, 2025
BtgZI GCGATG 2 cut(s) 2108, 2647
BtrI CACGTC 1 cut(s) 4802
BtsI GCAGTG 4 cut(s) 628, 790, 5827, 6030
BtuMI TCGCGA 1 cut(s) 3046
BveI ACCTGC 2 cut(s) 3364, 5950
CaiI CAGNNNCTG 7 cut(s) 1994, 2186, 2753, 3446, 3569, 3980, 4853
CciI TCATGA 3 cut(s) 475, 1270, 4048
CfoI GCGC 5 cut(s) 2532, 3002, 3052, 5596, 6097
Cfr10I RCCGGY 3 cut(s) 239, 497, 4041
Cfr13I GGNCC 8 cut(s) 328, 617, 2021, 3061, 3722, 4039, 4334, 4376
ClaI ATCGAT 2 cut(s) 18, 1962
CseI GACGC 1 cut(s) 5849
CspCI CAANNNNNGTGG 2 cut(s) 6159, 6194
EaeI YGGCCR 3 cut(s) 1162, 2066, 6110
EagI CGGCCG 1 cut(s) 1162
Eam1104I CTCTTC 9 cut(s) 1362, 1784, 2703, 3606, 4147, 4285, 5058, 5503, 6135
EarI CTCTTC 9 cut(s) 1362, 1784, 2703, 3606, 4147, 4285, 5058, 5503, 6135
EciI GGCGGA 1 cut(s) 2359
Ecl136II GAGCTC 2 cut(s) 4779, 5680
EclXI CGGCCG 1 cut(s) 1162
Eco105I TACGTA 1 cut(s) 1264
Eco130I CCWWGG 8 cut(s) 9, 544, 692, 1858, 2025, 2451, 4004, 6107
Eco147I AGGCCT 1 cut(s) 1353
Eco24I GRGCYC 2 cut(s) 4781, 5682
Eco31I GGTCTC 1 cut(s) 3994
Eco32I GATATC 2 cut(s) 16, 4845
Eco47I GGWCC 3 cut(s) 2021, 3061, 3722
Eco47III AGCGCT 1 cut(s) 2531
Eco52I CGGCCG 1 cut(s) 1162
Eco53kI GAGCTC 2 cut(s) 4779, 5680
Eco72I CACGTG 3 cut(s) 4637, 5040, 5633
Eco81I CCTNAGG 1 cut(s) 3433
Eco88I CYCGRG 2 cut(s) 4993, 5868
Eco91I GGTNACC 1 cut(s) 1174
EcoICRI GAGCTC 2 cut(s) 4779, 5680
EcoNI CCTNNNNNAGG 2 cut(s) 593, 2949
EcoO109I RGGNCCY 3 cut(s) 328, 617, 3061
EcoO65I GGTNACC 1 cut(s) 1174
EcoRI GAATTC 2 cut(s) 3652, 5047
EcoRII CCWGG 9 cut(s) 217, 310, 1554, 2781, 2921, 3695, 4660, 5322, 5877
EcoRV GATATC 2 cut(s) 16, 4845
EcoT14I CCWWGG 8 cut(s) 9, 544, 692, 1858, 2025, 2451, 4004, 6107
EcoT22I ATGCAT 1 cut(s) 1386
EcoT38I GRGCYC 2 cut(s) 4781, 5682
ErhI CCWWGG 8 cut(s) 9, 544, 692, 1858, 2025, 2451, 4004, 6107
Esp3I CGTCTC 1 cut(s) 3849
FalI AAGNNNNNCTT 2 cut(s) 942, 974
FaqI GGGAC 7 cut(s) 393, 1537, 2007, 2800, 2983, 3750, 4898
FauI CCCGC 1 cut(s) 348
FauNDI CATATG 2 cut(s) 2080, 4363
FbaI TGATCA 3 cut(s) 3130, 3793, 6060
FblI GTMKAC 4 cut(s) 5, 3753, 4549, 5824
FriOI GRGCYC 2 cut(s) 4781, 5682
GlaI GCGC 5 cut(s) 2531, 3001, 3051, 5595, 6096
GsaI CCCAGC 2 cut(s) 1706, 4728
GsuI CTGGAG 1 cut(s) 2442
HaeII RGCGCY 3 cut(s) 2533, 3053, 5597
HapII CCGG 5 cut(s) 240, 498, 682, 3126, 4042
HgaI GACGC 1 cut(s) 5849
HhaI GCGC 5 cut(s) 2532, 3002, 3052, 5596, 6097
Hin1I GRCGYC 1 cut(s) 1200
Hin6I GCGC 5 cut(s) 2530, 3000, 3050, 5594, 6095
HinP1I GCGC 5 cut(s) 2530, 3000, 3050, 5594, 6095
HincII GTYRAC 6 cut(s) 832, 1668, 1909, 2616, 3218, 4550
HindII GTYRAC 6 cut(s) 832, 1668, 1909, 2616, 3218, 4550
HindIII AAGCTT 2 cut(s) 3223, 5441
HpaI GTTAAC 2 cut(s) 1668, 2616
HpaII CCGG 5 cut(s) 240, 498, 682, 3126, 4042
Hpy99I CGWCG 2 cut(s) 1645, 4551
HpyCH4IV ACGT 8 cut(s) 1200, 1263, 2884, 4636, 4801, 5039, 5632, 6190
HpySE526I ACGT 8 cut(s) 1200, 1263, 2884, 4636, 4801, 5039, 5632, 6190
Hsp92I GRCGYC 1 cut(s) 1200
HspAI GCGC 5 cut(s) 2530, 3000, 3050, 5594, 6095
Ksp22I TGATCA 3 cut(s) 3130, 3793, 6060
KspAI GTTAAC 2 cut(s) 1668, 2616
LguI GCTCTTC 1 cut(s) 3606
MaeII ACGT 8 cut(s) 1200, 1263, 2884, 4636, 4801, 5039, 5632, 6190
MbiI CCGCTC 1 cut(s) 5465
MfeI CAATTG 2 cut(s) 1410, 2684
MflI RGATCY 8 cut(s) 1991, 2854, 4297, 4510, 4850, 5459, 5881, 6089
MhlI GDGCHC 3 cut(s) 4781, 5331, 5682
MlsI TGGCCA 2 cut(s) 2068, 6112
MluI ACGCGT 1 cut(s) 2044
MluNI TGGCCA 2 cut(s) 2068, 6112
MlyI GAGTC 5 cut(s) 1249, 1299, 3050, 3192, 5489
MmeI TCCRAC 6 cut(s) 449, 2085, 2382, 2822, 3846, 5601
Mox20I TGGCCA 2 cut(s) 2068, 6112
Mph1103I ATGCAT 1 cut(s) 1386
MroXI GAANNNNTTC 5 cut(s) 1224, 2550, 2646, 4675, 5811
MscI TGGCCA 2 cut(s) 2068, 6112
Msp20I TGGCCA 2 cut(s) 2068, 6112
MspA1I CMGCKG 6 cut(s) 355, 1030, 2462, 4724, 5893, 5908
MspCI CTTAAG 2 cut(s) 4054, 5738
MspI CCGG 5 cut(s) 240, 498, 682, 3126, 4042
MunI CAATTG 2 cut(s) 1410, 2684
Mva1269I GAATGC 1 cut(s) 4174
MvaI CCWGG 9 cut(s) 219, 312, 1556, 2783, 2923, 3697, 4662, 5324, 5879
MvnI CGCG 8 cut(s) 154, 207, 267, 2046, 3000, 3002, 3046, 6097
NciI CCSGG 1 cut(s) 683
NcoI CCATGG 3 cut(s) 9, 1858, 2025
NdeI CATATG 2 cut(s) 2080, 4363
NmeAIII GCCGAG 3 cut(s) 1467, 3538, 5446
NruI TCGCGA 1 cut(s) 3046
NsiI ATGCAT 1 cut(s) 1386
NspI RCATGY 8 cut(s) 414, 1535, 1572, 1602, 3767, 4421, 5106, 5177
NspV TTCGAA 2 cut(s) 3263, 6242
OliI CACNNNNGTG 2 cut(s) 2265, 5663
PacI TTAATTAA 1 cut(s) 4893
PaeI GCATGC 1 cut(s) 4421
PaeR7I CTCGAG 1 cut(s) 4993
PagI TCATGA 3 cut(s) 475, 1270, 4048
PceI AGGCCT 1 cut(s) 1353
PciI ACATGT 1 cut(s) 5173
PciSI GCTCTTC 1 cut(s) 3606
PctI GAATGC 1 cut(s) 4174
PdmI GAANNNNTTC 5 cut(s) 1224, 2550, 2646, 4675, 5811
PflFI GACNNNGTC 1 cut(s) 4859
PleI GAGTC 5 cut(s) 1248, 1299, 3049, 3192, 5489
PmaCI CACGTG 3 cut(s) 4637, 5040, 5633
PmlI CACGTG 3 cut(s) 4637, 5040, 5633
PpsI GAGTC 5 cut(s) 1248, 1299, 3049, 3192, 5489
Ppu21I YACGTR 4 cut(s) 1264, 4637, 5040, 5633
PpuMI RGGWCCY 1 cut(s) 3061
PscI ACATGT 1 cut(s) 5173
PshAI GACNNNNGTC 1 cut(s) 1549
PshBI ATTAAT 2 cut(s) 1943, 3189
Psp124BI GAGCTC 2 cut(s) 4781, 5682
Psp1406I AACGTT 1 cut(s) 6190
Psp5II RGGWCCY 1 cut(s) 3061
Psp6I CCWGG 9 cut(s) 217, 310, 1554, 2781, 2921, 3695, 4660, 5322, 5877
PspCI CACGTG 3 cut(s) 4637, 5040, 5633
PspEI GGTNACC 1 cut(s) 1174
PspFI CCCAGC 2 cut(s) 1702, 4724
PspGI CCWGG 9 cut(s) 217, 310, 1554, 2781, 2921, 3695, 4660, 5322, 5877
PspPI GGNCC 8 cut(s) 328, 617, 2021, 3061, 3722, 4039, 4334, 4376
PspPPI RGGWCCY 1 cut(s) 3061
PspXI VCTCGAGB 1 cut(s) 4993
PsrI GAACNNNNNNTAC 2 cut(s) 183, 215
PstI CTGCAG 7 cut(s) 715, 2869, 3375, 4384, 4714, 5842, 5999
PstNI CAGNNNCTG 7 cut(s) 1994, 2186, 2753, 3446, 3569, 3980, 4853
PsuI RGATCY 8 cut(s) 1991, 2854, 4297, 4510, 4850, 5459, 5881, 6089
PsyI GACNNNGTC 1 cut(s) 4859
PvuII CAGCTG 2 cut(s) 2462, 4724
RruI TCGCGA 1 cut(s) 3046
SacI GAGCTC 2 cut(s) 4781, 5682
SalI GTCGAC 1 cut(s) 4548
SapI GCTCTTC 1 cut(s) 3606
Sau96I GGNCC 8 cut(s) 328, 617, 2021, 3061, 3722, 4039, 4334, 4376
ScaI AGTACT 3 cut(s) 1753, 4102, 4898
SchI GAGTC 5 cut(s) 1249, 1299, 3050, 3192, 5489
SduI GDGCHC 3 cut(s) 4781, 5331, 5682
Sfr274I CTCGAG 1 cut(s) 4993
SfuI TTCGAA 2 cut(s) 3263, 6242
SinI GGWCC 3 cut(s) 2021, 3061, 3722
SlaI CTCGAG 1 cut(s) 4993
SmlI CTYRAG 5 cut(s) 2525, 2848, 4054, 4993, 5738
SmoI CTYRAG 5 cut(s) 2525, 2848, 4054, 4993, 5738
SnaBI TACGTA 1 cut(s) 1264
SpeI ACTAGT 2 cut(s) 4643, 5639
SphI GCATGC 1 cut(s) 4421
SseBI AGGCCT 1 cut(s) 1353
SspI AATATT 3 cut(s) 2245, 5474, 5509
SstI GAGCTC 2 cut(s) 4781, 5682
StuI AGGCCT 1 cut(s) 1353
StyI CCWWGG 8 cut(s) 9, 544, 692, 1858, 2025, 2451, 4004, 6107
TaiI ACGT 8 cut(s) 1203, 1266, 2887, 4639, 4804, 5042, 5635, 6193
TatI WGTACW 7 cut(s) 1751, 2829, 3911, 4100, 4137, 4202, 4896
TauI GCSGC 1 cut(s) 6100
TspGWI ACGGA 3 cut(s) 435, 2879, 3739
Tth111I GACNNNGTC 1 cut(s) 4859
Vha464I CTTAAG 2 cut(s) 4054, 5738
VneI GTGCAC 1 cut(s) 5327
VpaK11BI GGWCC 3 cut(s) 2021, 3061, 3722
VspI ATTAAT 2 cut(s) 1943, 3189
XagI CCTNNNNNAGG 2 cut(s) 593, 2949
XbaI TCTAGA 2 cut(s) 4024, 4280
XceI RCATGY 8 cut(s) 414, 1535, 1572, 1602, 3767, 4421, 5106, 5177
XcmI CCANNNNNNNNNTGG 1 cut(s) 4878
XhoI CTCGAG 1 cut(s) 4993
XmaJI CCTAGG 2 cut(s) 692, 4004
XmiI GTMKAC 4 cut(s) 5, 3753, 4549, 5824
XmnI GAANNNNTTC 5 cut(s) 1224, 2550, 2646, 4675, 5811
ZraI GACGTC 1 cut(s) 1201
ZrmI AGTACT 3 cut(s) 1753, 4102, 4898
Zsp2I ATGCAT 1 cut(s) 1386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.