Rh3BG219300

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0001944
Physical Location & Seq
Reverse (-)
19748514 .. 19753826
5313 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG219300.1

Sequence Viewer

Length: 3792 bp
ATGGAACGAGGAGGAGAGATGACAATGAATAAGAAAAAAGCAAGTGATCAAGACAAGCAGAGTGTTCCATTTTACAAGCTGTTTATGTTCGCTGACCAATACGACATCACGTTGATGATCATCGGAAGTTTAAGTGCGATTGGAAATGGGCTATCACAGCCACTCATGACGCTGGTCTTCGGTGGTCTTATCAATTCTTTTGGAGCTACCGACCCAGCTCATATTGTTCCTACTGTTTCTCAAGTGTCTCTAAAGTTTTTGTACTTGGCTATTGGTACAGGCCTTGCTGCATTTTTGCAGGTCTCATGTTGGATGGTGACTGGGGAAAGACAAGCCACTCGAATTCGAGGCTTGTACTTGAAAACAATACTAAGACAGGATATTGGATTTTTCGACACTCAAACTAACACCGGAGAGATCATTGGGAGAATGTCAGGGGACACCATTCTCATTCAAAATGCCATGGGCGAAAAGGTGGGGAAGTTCATACAGCTCCTTTCAACTTTTCTCGGCGGTTTTGTAATTGCTTTTCTCAAAGGATGGCTTCTCACCTTGGTTTTGCTGTCCTGTATTCCTGCAATTGTTATTGCTGGAGGAGTCATGTCCATTGTCGTTTCTAAAATGTCAACACGCGGGCAGCGTGCTTATGCAGAAGCTGGCACTATAGTAGAACAAACTGTTGGAGCCATCAGAACAGTTGCATCTTTTACCGGAGAGAAGGAAGCGATAGATAAATACAACCAGAAGCTGAAAATTGCGTACAATAACACGGTTCAACAAGGACTAGCCACAGGGGTTGGACTTGGTACATTCATGCTCATTGTCTTTGGCACTTATGGACTTGCAATATGGTATGGATCAAAAATGATCATTGAGAAAGGCTACAATGGGGGCCAAGTCATCAATGTTCTATTTGCAATGATGAGTGGTGGAATGGCACTAGGACAGACATCACCGTCTCTTAATGCATTTACAACAGGAAAAGCTGCTGCATATAAAATGCTTGAGACCATCAAGCGAACACCAACAATTGATCCTTATGATACTACTGGAGTTGTATTGGAAGATGTTAAAGGAGAGGTCAAACTTAAAGATGTGTATTTCAGGTATCCTGCTAGGCCAGATGTGCAGATCTTTGCTGGATTCTCGTTGCATGTTCCGAGCGGCACAACGACTGCTTTGGTTGGGCAGAGTGGAAGTGGGAAGTCAACAGTAATAGGCTTGGTAGAGAGGTTTTATGATCCAGAAGCTGGTGAAGTGTTTATAGATGGAGTCGATTTGAAGAAGTTGCATCTCAGATCAATAAGGGAGAGGATTGGGCTTGTAAGTCAAGAGCCAAATCTTTTTACAACAACAATAAGGCAGAACATAGCATATGGGAAAGATAATGCAACCGAAGAGGAGATTAGAAGAGCCCTGGAGCTTGCAAATGCAGCAAAGTTCATTGATAAACTGCCCAAGGGGCTTGACACAATGGTAGGTGGAACATCATTATCGGGTGGACAAAAGCAAAGAATTGCAATTGCTAGAGCCATTTTGAAGAACCCAAGAATTCTGCTTCTCGACGAAGCAACAAGCGCTCTAGATACTGAGTCTGAACGAATAGTTCAAGATGCACTTGTCAGATTAATGTCAAATAGGACAACTATAGTTGTTGCTCATCGCTTGACAACGATAAGAAATGCTGATGCAATAGCAGTGGTTCATAAAGGGAAAATTGTAGAAAAAGGAACTCACGACGAATTGACCAAAGATCCAGAAGGAGCTTATAGCCAACTACTTCGCCTACAGGAAGGAGCTAAAGAAAAAGATGCAGAATCAACCGGTCTAGATAATGGTTTAGATATAGATAAGACCATGCTTAGCTCTGGGAGCCAGAGATTATCAGCAGGGGCATCTTTAAGCAGAGGTTCATCAGGTAGCCGGCTGTCCACCACAATTAGCAGCTTTGGCACTCCTGCTCTGGTTAATTGCCAAGTGACAGAAGTAGTTGATGGGGAGAGCCTTGAAAAAATTAAGGTTGATCCCAAAGAGCGTAAAGCAGTTTCAATCAAAAGGTTGGCCATGATGAACAAAAATGAGCTTCCAATTTTGCTTATTGGAGCCATTGCTGCAGCTTGTCATGGAGTAATTTTTCCTGTATTCGGCTTACTACTCTCAAAAGCCATTAAAATGTTCTATGAACCGCATAGTGTGCTACGAGAAGACTCGAAAACATGGGCTGGACTGTATGTAGGGATGGGTTGCCTTGGGCTGGTTGTCGTTCCTGTGCAGAATTTCTTCTTTGGAGTTGCAGGTGGAAAATTGATACAGCAAATTCGTTCCTTGACATTTCAAAAGGTGGTGCACCAAGAAATTAGTTGGTTTGATGATCCCGCAAATTCAAGTGGTGCCATTGGTGCAAGGTTGTCTTCTGATGCTTCAACCGTGAAGGCTCTTGTTGGTGACGGCTTAGCCTTGATTGCACAAAATATAGCAACTGTCATAGCAGGGTTGGTTATAGGGTTCACAGCTAACTGGAAACTGGCGCTTCTGATTTTAGGCGTGTCGCCATTATTGATTATGCAAGGAGTACTTCAAACCAAATTTCTTAAAGGGTTTAGTGGAGATGCCAAGGTTATGTACGAAGAAGCTAGCCAAGTGGCAAATGATGCAATTGGTAGCATTCGAACTGTTGCATCATTTTGTTCTGAAAAGAAGGTGATGGATGCTTATGAGAAGAAGTGTGAAGGTCCCATGAAGCAAGGAGTACGGTTAGGAGTAGTGAGTGGTGTAGGTTTTGGCTTCTCTTTCTTCGTAATGTTCTGCACCAATGCATTAATTTTCTACATTGGAGCTATTCTTGTAAAAAATGGGCAAGCTAAATTTGAACAAGTATTCATGGTGTTCTTTGCTTTGACAATCTCAGCAGTAGGAGTTTCAGAATCTAGTGGTATGGCTCCTGACTCTAACAAAGCAAAGGACTCAGCAGCTTCAATATTTAAGATTCTTGACAGTAAGCCTAAGATCGACTTGAGCAGCGACGCAGGCTTAACACTACCGAGCATAAGTGGAAAAATTGATCTCGAACATGTCAGCTTCAAATATCCCACAAGGCCGGATGTGCAGATATTTAGAGACGTTTGCTTGAATTTCCCCTCTGGAAAGACTGTTGCTTTGGTTGGAGAGAGTGGCAGTGGGAAGTCGACAGTGATTGGCCTCATAGAGAGATTCTATGACCCCGACTCAGGTCGTGTACTATTAGATGGAGTGGAAATCAATAGGTTCAAGATAAACTGGCTGAGGCAACAAATAGGTTTGGTTGGTCAAGAACCAATTCTCTTTAACGCATCCATTCGGACCAATATTGCTTATGGCAAGCGAGGAGATGTAACTGAAGAACAGATCATTGCAGCCACAAAGGCATCAAATGCTCACAACTTCATTTCTTCATTGCCTCAAGGATATGACACCTCAGTTGGGGAACGAGGGGTTCAGTTATCTGGAGGGCAGAAGCAAAGAATAGCCATTGCAAGGGCTATTCTAAAGGACCCGAAAATTCTTTTGCTTGACGAAGCTACAAGCGCACTGGATGCAGAGTCGGAACGCATAGTACAAGATGCTTTAGACAGAGTGATGGTGAATAGAACAACTGTTGTCGTTGCGCACCGCCTTACCACGATCAAAGGGGCAGACATAATTGCTGTGGTCAAGAACGGCGTGATTGCTGAGAAGGGTAGCCATGATTTTCTAATGAAGATCACTGATGGTGCTTATGCGTCTTTGGTGGCACTTCATTCAAGCTCAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1263

Amino Acids

135.86

Weight (kDa)

8.99

Isoelectric Point (pI)

30.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 39 - 310 1.4e-59 ABC transporter transmembrane region
ABC_tran PF00005 381 - 526 1.1e-31 ABC transporter
ABC_membrane PF00664 698 - 970 6.5e-60 ABC transporter transmembrane region
ABC_tran PF00005 1039 - 1188 1.5e-32 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2285
AasI GACNNNNNNGTC 1 cut(s) 955
Acc16I TGCGCA 1 cut(s) 3645
Acc36I ACCTGC 2 cut(s) 289, 2285
AccB1I GGYRCC 1 cut(s) 2390
AccB7I CCANNNNNTGG 1 cut(s) 1250
AccBSI CCGCTC 1 cut(s) 1164
AccI GTMKAC 1 cut(s) 3185
AccII CGCG 1 cut(s) 633
AciI CCGC 6 cut(s) 513, 633, 1164, 2186, 2376, 3649
AclWI GGATC 6 cut(s) 865, 1028, 1235, 1748, 2018, 2366
AcoI YGGCCR 1 cut(s) 2061
AcsI RAATTY 9 cut(s) 342, 1551, 2275, 2316, 2380, 2585, 2864, 3130, 3537
AcuI CTGAAG 1 cut(s) 3396
AfeI AGCGCT 1 cut(s) 1579
AfiI CCNNNNNNNGG 6 cut(s) 1250, 2144, 2254, 3227, 3459, 3513
AflIII ACRYGT 1 cut(s) 3070
AgeI ACCGGT 1 cut(s) 1823
AjnI CCWGG 1 cut(s) 1416
AjuI GAANNNNNNNTTGG 2 cut(s) 663, 695
Alw21I GWGCWC 1 cut(s) 2349
Alw26I GTCTC 5 cut(s) 252, 307, 963, 1001, 3111
Alw44I GTGCAC 1 cut(s) 2345
AlwI GGATC 6 cut(s) 865, 1028, 1235, 1748, 2018, 2366
AlwNI CAGNNNCTG 3 cut(s) 656, 748, 1250
Aor51HI AGCGCT 1 cut(s) 1579
AoxI GGCC 6 cut(s) 280, 892, 1118, 2061, 3095, 3196
ApaLI GTGCAC 1 cut(s) 2345
ApoI RAATTY 9 cut(s) 342, 1551, 2275, 2316, 2380, 2585, 2864, 3130, 3537
ArsI GACNNNNNNTTYG 2 cut(s) 3139, 3171
AseI ATTAAT 2 cut(s) 1628, 2819
AsiGI ACCGGT 1 cut(s) 1823
Asp700I GAANNNNTTC 2 cut(s) 2279, 3315
AspLEI GCGC 4 cut(s) 1580, 2530, 3566, 3646
AspS9I GGNCC 4 cut(s) 892, 2732, 3339, 3529
AsuHPI GGTGA 7 cut(s) 328, 541, 945, 1265, 2456, 2713, 3631
AsuII TTCGAA 1 cut(s) 2668
AsuNHI GCTAGC 1 cut(s) 2633
AvaII GGWCC 3 cut(s) 2732, 3339, 3529
BaeGI GKGCMC 1 cut(s) 2349
BalI TGGCCA 1 cut(s) 2063
BanI GGYRCC 1 cut(s) 2390
BanII GRGCYC 1 cut(s) 1417
BbsI GAAGAC 3 cut(s) 169, 2211, 2403
Bbv12I GWGCWC 1 cut(s) 2349
BbvCI CCTCAGC 1 cut(s) 3281
BceAI ACGGC 2 cut(s) 2464, 3712
BciT130I CCWGG 1 cut(s) 1418
BciVI GTATCC 1 cut(s) 1119
BclI TGATCA 3 cut(s) 46, 117, 867
BcoDI GTCTC 5 cut(s) 252, 307, 963, 1001, 3111
BfaI CTAG 8 cut(s) 785, 941, 1116, 1527, 1583, 1829, 2634, 2928
BfmI CTRYAG 4 cut(s) 663, 1647, 1787, 2112
BfoI RGCGCY 2 cut(s) 1581, 2531
BfuAI ACCTGC 2 cut(s) 289, 2285
BfuI GTATCC 1 cut(s) 1119
BglI GCCNNNNNGGC 2 cut(s) 1462, 3401
BglII AGATCT 1 cut(s) 1131
BlpI GCTNAGC 2 cut(s) 1862, 2452
BmcAI AGTACT 1 cut(s) 2574
Bme1390I CCNGG 1 cut(s) 1418
Bme18I GGWCC 3 cut(s) 2732, 3339, 3529
BmgT120I GGNCC 4 cut(s) 892, 2732, 3339, 3529
BmiI GGNNCC 8 cut(s) 685, 893, 1874, 2104, 2392, 2734, 2940, 3531
BmrFI CCNGG 1 cut(s) 1418
BmrI ACTGGG 1 cut(s) 330
BmtI GCTAGC 1 cut(s) 2637
BmuI ACTGGG 1 cut(s) 330
BoxI GACNNNNGTC 2 cut(s) 173, 3228
BpiI GAAGAC 3 cut(s) 169, 2211, 2403
BpmI CTGGAG 4 cut(s) 612, 1071, 1439, 3504
Bpu10I CCTNAGC 1 cut(s) 3281
Bpu1102I GCTNAGC 2 cut(s) 1862, 2452
Bpu14I TTCGAA 1 cut(s) 2668
BpuEI CTTGAG 4 cut(s) 225, 1025, 3034, 3423
BsaBI GATNNNNATC 1 cut(s) 119
BsaI GGTCTC 2 cut(s) 307, 1001
BsaJI CCNNGG 6 cut(s) 462, 552, 1416, 1458, 2248, 2613
BsaWI WCCGGW 3 cut(s) 410, 710, 1823
Bsc4I CCNNNNNNNGG 6 cut(s) 1250, 2144, 2254, 3227, 3459, 3513
Bse118I RCCGGY 2 cut(s) 1823, 1923
Bse1I ACTGG 6 cut(s) 325, 1054, 2522, 2529, 3281, 3573
Bse3DI GCAATG 5 cut(s) 924, 2106, 3387, 3431, 3507
Bse8I GATNNNNATC 1 cut(s) 119
BseBI CCWGG 1 cut(s) 1418
BseDI CCNNGG 6 cut(s) 462, 552, 1416, 1458, 2248, 2613
BseGI GGATG 7 cut(s) 318, 545, 2244, 2713, 3106, 3329, 3577
BseJI GATNNNNATC 1 cut(s) 119
BseLI CCNNNNNNNGG 6 cut(s) 1250, 2144, 2254, 3227, 3459, 3513
BseMI GCAATG 5 cut(s) 924, 2106, 3387, 3431, 3507
BseMII CTCAG 8 cut(s) 1309, 1581, 2919, 2979, 3240, 3272, 3468, 3699
BseNI ACTGG 6 cut(s) 325, 1054, 2522, 2529, 3281, 3573
BseRI GAGGAG 5 cut(s) 24, 27, 609, 1415, 3378
BseSI GKGCMC 1 cut(s) 2349
BseYI CCCAGC 1 cut(s) 214
BsgI GTGCAG 4 cut(s) 1148, 2291, 2791, 3125
Bsh1236I CGCG 1 cut(s) 633
BshFI GGCC 6 cut(s) 282, 894, 1120, 2063, 3097, 3198
BshNI GGYRCC 1 cut(s) 2390
BshTI ACCGGT 1 cut(s) 1823
BsiHKAI GWGCWC 1 cut(s) 2349
BsiSI CCGG 5 cut(s) 411, 711, 1824, 1924, 3098
BslFI GGGAC 2 cut(s) 452, 2718
BslI CCNNNNNNNGG 6 cut(s) 1250, 2144, 2254, 3227, 3459, 3513
BsmAI GTCTC 5 cut(s) 252, 307, 963, 1001, 3111
BsmBI CGTCTC 2 cut(s) 963, 3111
BsmFI GGGAC 2 cut(s) 452, 2718
BsmI GAATGC 1 cut(s) 2664
BsnI GGCC 6 cut(s) 282, 894, 1120, 2063, 3097, 3198
Bso31I GGTCTC 2 cut(s) 307, 1001
Bsp119I TTCGAA 1 cut(s) 2668
Bsp1286I GDGCHC 2 cut(s) 1417, 2349
Bsp1720I GCTNAGC 2 cut(s) 1862, 2452
Bsp19I CCATGG 1 cut(s) 462
BspACI CCGC 6 cut(s) 513, 633, 1164, 2186, 2376, 3649
BspANI GGCC 6 cut(s) 282, 894, 1120, 2063, 3097, 3198
BspCNI CTCAG 8 cut(s) 1308, 1582, 2918, 2978, 3239, 3273, 3467, 3700
BspFNI CGCG 1 cut(s) 633
BspHI TCATGA 1 cut(s) 165
BspLI GGNNCC 8 cut(s) 685, 893, 1874, 2104, 2392, 2734, 2940, 3531
BspMAI CTGCAG 1 cut(s) 2116
BspMI ACCTGC 2 cut(s) 289, 2285
BspOI GCTAGC 1 cut(s) 2637
BspPI GGATC 6 cut(s) 865, 1028, 1235, 1748, 2018, 2366
BspQI GCTCTTC 1 cut(s) 1405
BspT104I TTCGAA 1 cut(s) 2668
BspT107I GGYRCC 1 cut(s) 2390
BspTNI GGTCTC 2 cut(s) 307, 1001
BsrBI CCGCTC 1 cut(s) 1164
BsrDI GCAATG 5 cut(s) 924, 2106, 3387, 3431, 3507
BsrFI RCCGGY 2 cut(s) 1823, 1923
BsrI ACTGG 6 cut(s) 325, 1054, 2522, 2529, 3281, 3573
BssAI RCCGGY 2 cut(s) 1823, 1923
BssECI CCNNGG 6 cut(s) 462, 552, 1416, 1458, 2248, 2613
BssT1I CCWWGG 5 cut(s) 462, 552, 1458, 2248, 2613
Bst2UI CCWGG 1 cut(s) 1418
Bst6I CTCTTC 2 cut(s) 1392, 1405
BstAPI GCANNNNNTGC 4 cut(s) 2194, 2651, 3410, 3572
BstBI TTCGAA 1 cut(s) 2668
BstC8I GCNNGC 9 cut(s) 635, 642, 658, 1425, 1925, 2635, 2859, 3028, 3359
BstDSI CCRYGG 1 cut(s) 462
BstF5I GGATG 7 cut(s) 318, 545, 2244, 2713, 3106, 3329, 3577
BstFNI CGCG 1 cut(s) 633
BstH2I RGCGCY 2 cut(s) 1581, 2531
BstHHI GCGC 4 cut(s) 1580, 2530, 3566, 3646
BstMAI GTCTC 5 cut(s) 252, 307, 963, 1001, 3111
BstNI CCWGG 1 cut(s) 1418
BstNSI RCATGY 2 cut(s) 1157, 3074
BstPAI GACNNNNGTC 2 cut(s) 173, 3228
BstSCI CCNGG 1 cut(s) 1416
BstSFI CTRYAG 4 cut(s) 663, 1647, 1787, 2112
BstSLI GKGCMC 1 cut(s) 2349
BstUI CGCG 1 cut(s) 633
BstV2I GAAGAC 3 cut(s) 169, 2211, 2403
BstX2I RGATCY 2 cut(s) 1131, 1753
BstYI RGATCY 2 cut(s) 1131, 1753
BsuI GTATCC 1 cut(s) 1119
BsuRI GGCC 6 cut(s) 282, 894, 1120, 2063, 3097, 3198
BtgI CCRYGG 1 cut(s) 462
BtgZI GCGATG 1 cut(s) 1646
BtsCI GGATG 7 cut(s) 318, 545, 2244, 2713, 3106, 3329, 3577
BtsI GCAGTG 2 cut(s) 1704, 3181
BtsIMutI CAGTG 5 cut(s) 1704, 3181, 3195, 3566, 3741
BveI ACCTGC 2 cut(s) 289, 2285
Cac8I GCNNGC 9 cut(s) 635, 642, 658, 1425, 1925, 2635, 2859, 3028, 3359
CaiI CAGNNNCTG 3 cut(s) 656, 748, 1250
CciI TCATGA 1 cut(s) 165
CfoI GCGC 4 cut(s) 1580, 2530, 3566, 3646
Cfr10I RCCGGY 2 cut(s) 1823, 1923
Cfr13I GGNCC 4 cut(s) 892, 2732, 3339, 3529
CseI GACGC 3 cut(s) 178, 3032, 3747
CspAI ACCGGT 1 cut(s) 1823
CspCI CAANNNNNGTGG 4 cut(s) 778, 813, 1680, 1715
DrdI GACNNNNNNGTC 1 cut(s) 955
DseDI GACNNNNNNGTC 1 cut(s) 955
EaeI YGGCCR 1 cut(s) 2061
Eam1104I CTCTTC 2 cut(s) 1392, 1405
EarI CTCTTC 2 cut(s) 1392, 1405
Eco130I CCWWGG 5 cut(s) 462, 552, 1458, 2248, 2613
Eco147I AGGCCT 1 cut(s) 282
Eco24I GRGCYC 1 cut(s) 1417
Eco31I GGTCTC 2 cut(s) 307, 1001
Eco47I GGWCC 3 cut(s) 2732, 3339, 3529
Eco47III AGCGCT 1 cut(s) 1579
Eco57I CTGAAG 1 cut(s) 3396
EcoO109I RGGNCCY 2 cut(s) 2732, 3529
EcoRI GAATTC 2 cut(s) 342, 1551
EcoRII CCWGG 1 cut(s) 1416
EcoT14I CCWWGG 5 cut(s) 462, 552, 1458, 2248, 2613
EcoT22I ATGCAT 2 cut(s) 970, 2818
EcoT38I GRGCYC 1 cut(s) 1417
ErhI CCWWGG 5 cut(s) 462, 552, 1458, 2248, 2613
Esp3I CGTCTC 2 cut(s) 963, 3111
FaqI GGGAC 2 cut(s) 452, 2718
FauI CCCGC 2 cut(s) 626, 2383
FauNDI CATATG 1 cut(s) 1375
FbaI TGATCA 3 cut(s) 46, 117, 867
FblI GTMKAC 1 cut(s) 3185
FokI GGATG 7 cut(s) 325, 552, 2251, 2720, 3113, 3316, 3584
FriOI GRGCYC 1 cut(s) 1417
FspBI CTAG 8 cut(s) 785, 941, 1116, 1527, 1583, 1829, 2634, 2928
FspI TGCGCA 1 cut(s) 3645
GlaI GCGC 4 cut(s) 1579, 2529, 3565, 3645
GsaI CCCAGC 1 cut(s) 218
GsuI CTGGAG 4 cut(s) 612, 1071, 1439, 3504
HaeII RGCGCY 2 cut(s) 1581, 2531
HaeIII GGCC 6 cut(s) 282, 894, 1120, 2063, 3097, 3198
HapII CCGG 5 cut(s) 411, 711, 1824, 1924, 3098
HgaI GACGC 3 cut(s) 178, 3032, 3747
HhaI GCGC 4 cut(s) 1580, 2530, 3566, 3646
Hin6I GCGC 4 cut(s) 1578, 2528, 3564, 3644
HinP1I GCGC 4 cut(s) 1578, 2528, 3564, 3644
HincII GTYRAC 3 cut(s) 627, 1209, 3186
HindII GTYRAC 3 cut(s) 627, 1209, 3186
HpaII CCGG 5 cut(s) 411, 711, 1824, 1924, 3098
HphI GGTGA 7 cut(s) 328, 541, 945, 1265, 2456, 2713, 3631
Hpy166II GTNNAC 8 cut(s) 627, 1209, 1502, 1932, 2347, 2508, 3186, 3236
Hpy8I GTNNAC 8 cut(s) 627, 1209, 1502, 1932, 2347, 2508, 3186, 3236
Hpy99I CGWCG 3 cut(s) 1568, 1742, 3026
HpyAV CCTTC 7 cut(s) 712, 1754, 1787, 2425, 2692, 2723, 3706
HpyCH4IV ACGT 2 cut(s) 110, 3120
HpySE526I ACGT 2 cut(s) 110, 3120
HspAI GCGC 4 cut(s) 1578, 2528, 3564, 3644
KroI GCCGGC 1 cut(s) 1923
KroNI GCCGGC 1 cut(s) 1925
Ksp22I TGATCA 3 cut(s) 46, 117, 867
LguI GCTCTTC 1 cut(s) 1405
MaeI CTAG 8 cut(s) 785, 941, 1116, 1527, 1583, 1829, 2634, 2928
MaeII ACGT 2 cut(s) 110, 3120
MaeIII GTNAC 4 cut(s) 316, 1978, 2444, 3370
MbiI CCGCTC 1 cut(s) 1164
MfeI CAATTG 4 cut(s) 579, 1029, 1521, 2655
MflI RGATCY 2 cut(s) 1131, 1753
MhlI GDGCHC 2 cut(s) 1417, 2349
MlsI TGGCCA 1 cut(s) 2063
MluNI TGGCCA 1 cut(s) 2063
MlyI GAGTC 8 cut(s) 606, 1281, 1601, 2201, 2939, 2957, 3218, 3587
MmeI TCCRAC 5 cut(s) 290, 661, 778, 3142, 3561
Mox20I TGGCCA 1 cut(s) 2063
Mph1103I ATGCAT 2 cut(s) 970, 2818
MroNI GCCGGC 1 cut(s) 1923
MroXI GAANNNNTTC 2 cut(s) 2279, 3315
MscI TGGCCA 1 cut(s) 2063
MslI CAYNNNNRTG 2 cut(s) 113, 2171
Msp20I TGGCCA 1 cut(s) 2063
MspI CCGG 5 cut(s) 411, 711, 1824, 1924, 3098
MspR9I CCNGG 1 cut(s) 1418
MunI CAATTG 4 cut(s) 579, 1029, 1521, 2655
Mva1269I GAATGC 1 cut(s) 2664
MvaI CCWGG 1 cut(s) 1418
MvnI CGCG 1 cut(s) 633
NaeI GCCGGC 1 cut(s) 1925
NcoI CCATGG 1 cut(s) 462
NdeI CATATG 1 cut(s) 1375
NgoMIV GCCGGC 1 cut(s) 1923
NheI GCTAGC 1 cut(s) 2633
NlaIV GGNNCC 8 cut(s) 685, 893, 1874, 2104, 2392, 2734, 2940, 3531
NmeAIII GCCGAG 1 cut(s) 489
NmuCI GTSAC 3 cut(s) 316, 1978, 2444
NsbI TGCGCA 1 cut(s) 3645
NsiI ATGCAT 2 cut(s) 970, 2818
NspI RCATGY 2 cut(s) 1157, 3074
NspV TTCGAA 1 cut(s) 2668
PagI TCATGA 1 cut(s) 165
PaqCI CACCTGC 1 cut(s) 2285
PceI AGGCCT 1 cut(s) 282
PciI ACATGT 1 cut(s) 3070
PciSI GCTCTTC 1 cut(s) 1405
PcsI WCGNNNNNNNCGW 1 cut(s) 637
PctI GAATGC 1 cut(s) 2664
PdiI GCCGGC 1 cut(s) 1925
PdmI GAANNNNTTC 2 cut(s) 2279, 3315
PfeI GAWTC 5 cut(s) 1143, 1817, 2924, 2986, 3210
PflMI CCANNNNNTGG 1 cut(s) 1250
PinAI ACCGGT 1 cut(s) 1823
PleI GAGTC 8 cut(s) 605, 1280, 1600, 2201, 2939, 2957, 3218, 3586
PpsI GAGTC 8 cut(s) 605, 1280, 1600, 2201, 2939, 2957, 3218, 3586
PpuMI RGGWCCY 2 cut(s) 2732, 3529
PscI ACATGT 1 cut(s) 3070
PshAI GACNNNNGTC 2 cut(s) 173, 3228
PshBI ATTAAT 2 cut(s) 1628, 2819
Psp5II RGGWCCY 2 cut(s) 2732, 3529
Psp6I CCWGG 1 cut(s) 1416
PspFI CCCAGC 1 cut(s) 214
PspGI CCWGG 1 cut(s) 1416
PspN4I GGNNCC 8 cut(s) 685, 893, 1874, 2104, 2392, 2734, 2940, 3531
PspPI GGNCC 4 cut(s) 892, 2732, 3339, 3529
PspPPI RGGWCCY 2 cut(s) 2732, 3529
PsrI GAACNNNNNNTAC 2 cut(s) 3576, 3608
PstI CTGCAG 1 cut(s) 2116
PstNI CAGNNNCTG 3 cut(s) 656, 748, 1250
PsuI RGATCY 2 cut(s) 1131, 1753
RseI CAYNNNNRTG 2 cut(s) 113, 2171
SalI GTCGAC 1 cut(s) 3184
SapI GCTCTTC 1 cut(s) 1405
Sau96I GGNCC 4 cut(s) 892, 2732, 3339, 3529
ScaI AGTACT 1 cut(s) 2574
SchI GAGTC 8 cut(s) 606, 1281, 1601, 2201, 2939, 2957, 3218, 3587
ScrFI CCNGG 1 cut(s) 1418
SduI GDGCHC 2 cut(s) 1417, 2349
SfcI CTRYAG 4 cut(s) 663, 1647, 1787, 2112
SfuI TTCGAA 1 cut(s) 2668
SinI GGWCC 3 cut(s) 2732, 3339, 3529
SmiMI CAYNNNNRTG 2 cut(s) 113, 2171
SmlI CTYRAG 4 cut(s) 240, 1004, 3013, 3438
SmoI CTYRAG 4 cut(s) 240, 1004, 3013, 3438
SseBI AGGCCT 1 cut(s) 282
SsiI CCGC 6 cut(s) 513, 633, 1164, 2186, 2376, 3649
SspI AATATT 2 cut(s) 2979, 3346
SspMI CTAG 8 cut(s) 785, 941, 1116, 1527, 1583, 1829, 2634, 2928
StuI AGGCCT 1 cut(s) 282
StyD4I CCNGG 1 cut(s) 1416
StyI CCWWGG 5 cut(s) 462, 552, 1458, 2248, 2613
TaiI ACGT 2 cut(s) 113, 3123
TatI WGTACW 5 cut(s) 261, 354, 2572, 3235, 3592
TauI GCSGC 1 cut(s) 1167
TfiI GAWTC 5 cut(s) 1143, 1817, 2924, 2986, 3210
TscAI CASTG 5 cut(s) 1704, 3181, 3195, 3573, 3748
TseFI GTSAC 3 cut(s) 316, 1978, 2444
Tsp45I GTSAC 3 cut(s) 316, 1978, 2444
TspRI CASTG 5 cut(s) 1704, 3181, 3195, 3573, 3748
Van91I CCANNNNNTGG 1 cut(s) 1250
VneI GTGCAC 1 cut(s) 2345
VpaK11BI GGWCC 3 cut(s) 2732, 3339, 3529
VspI ATTAAT 2 cut(s) 1628, 2819
XapI RAATTY 9 cut(s) 342, 1551, 2275, 2316, 2380, 2585, 2864, 3130, 3537
XbaI TCTAGA 2 cut(s) 1582, 1828
XceI RCATGY 2 cut(s) 1157, 3074
XmiI GTMKAC 1 cut(s) 3185
XmnI GAANNNNTTC 2 cut(s) 2279, 3315
XspI CTAG 8 cut(s) 785, 941, 1116, 1527, 1583, 1829, 2634, 2928
ZrmI AGTACT 1 cut(s) 2574
Zsp2I ATGCAT 2 cut(s) 970, 2818
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.