RLG00000031931

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0001944
Physical Location & Seq
Reverse (-)
9607730 .. 9613051
5322 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031931

Sequence Viewer

Length: 3687 bp
ATGATCGTCGGGAGTATCTGTGCCATCGGAAACGGGCTGTCGCAGCCGTTCATGACGCTCATCTTCGGCAGTCTTATCAATACTTTCGGACATACTGACCGGGCTCATATCGTCCCCATGATTTCTAAGGTGTCTCTAAAATTTGTGTACTTGGGCATTGGTACTGGCATTGCTGCATTTCTACAGGTATCATGTTGGATGGTAACTGGGGAAAGACAGGCCACTCGAATTCGAAGCTTGTACTTGAAAGCAATTTTAAGACAGGACATTGGATATTTTGACACCGAAACTAACACTGGAGAGATCATTGGCAGAATGTCAGGGGACACAATTCTCATTCAAGATGCCATGGGAGAAAAGGTGGGGAAGTTCATTCAACTCCTTTCAACTTTTGTAGGCGGTTTTGTAATTGCTTTAGTCAAGGGATGGCTTCTCACCCTGGTATTACTGTCATGTATTCCCGCTATTGTCTTTGCTGGTGGAATGATGGCCATTATTGTTTCCAAAATGTCAACACGTGGACAGCGTGCTTATGCGGAAGCTGGCAGTATAGTAGAACAAACAGTTGGAGCCATTCGAACAGTTGCATCTTTTACCGGAGAGAAGCAAGCGATAGAAAAATATAACAAGAAGCTAAAGGTTGCCTACAATAGTACAGTTCAACAAGGACTTGCCACAGGAGTTGGACTTGGTACGTTCATACTTATTGTCTTTGGCACTTATGGACTTGCCATATGGTATGGATCCAAAATGATCATCGAAAAAGGATATAATGGAGGCCAAGTCATCAATGTTATATTTGCAATAATGACGGGTGGAATGTGCCTGGGGCAGACATCACCGTCTTTGAATGCATTTGCAGCAGGGACAGCTGCTGCATACAAAATGCTCGAGACCATCAAACGAACGCCGAAGATTGATCCTTATGATACCTCTGGAGTTGTATTGGACGATATTAAAGGAGAGGTGGAGCTCAAAAACGTCTATTTCAGGTACCCTGCCAGGCCGGATGTGCAGATTTTTGCGGGATTCTCGTTGCATGTTCCGAGTGGCACAACGACTGCTTTGGTTGGGCAGAGTGGAAGTGGGAAGTCAACAGTGATAGGCTTGGTAGAGAGGTTTTATGATCCAGAAGCTGGTGAAGTACTTATAGATGGTGTCGATTTGAAGAAGTTGCATCTTAGATCGATAAGGGAGAAGATTGGGCTTGTAAGTCAAGAGCCGAATCTTTTTACTACAACAATAAGGGAGAACGTAGCATATGGGAAGGAAAATGCAACTCAAGAAGAGATTAGAAGAGCAATTGAGCTCGCAAATGCAGCAAAGTTTATTGACAAGTTGCCTCAGGGGCTCGACACAATGGTAGGTGAGCATGGAACATCGTTATCGGGTGGACAAAAGCAAAGAATTGCAATTGCAAGAGCCATTTTAAAGAACCCTAGAATTCTACTTCTGGACGAAGCAACAAGCGCCTTGGATGCTGAGTCGGAGCGAATTGTTCAAGATGCACTGCTGAGATTGATGTCAAATAGAACGACTATAGTTGTTGCACATCGCTTAACAACGATTAGGAATGCTGATGCAATAGCTGTGGTGCATAAAGGGAAAATTGTTGAAATAGGAACTCATGATGACTTGACCCAAAACCCAGAAGGAGCTTACAGCCAACTAATCCGCCTGCAAGAAAGAGCTAAAGAAAAAGGTGCAGAGCCCTCTGATCCAGATAATGGTTTGGATATAGATAGGACAATGAGTAGATCTGGGTGCCAGAGACTTTCAGCAGTGAGATCTTTAAGCAAAGGTTCATCAGGTAGGCGGCGCTCATTCACTATTACTAGCTTTGGTGTTCCTGCTCCAGTTAATTGTGAAGTACAAGTAGAAGAAGAAGATGAGGAGAACCGTGTGAAAACGAAGGTTGATCCGGAGCAACGCAAAAAAGTTTCCATCAAAAGGCTGGCCTATTTGAATAAACCCGAGCTTCCAGTTTTGCTGCTTGGATCTATTGCTGCAGCAGGTCATGGAGTGATTTTTCCTGTCTTCAGCTTACTACTCTCAAAAGCCATCAAGATGTTCTATGAACCGCATAATGAGCTGCGAAAAGACTCCAAAGTTTGGGCAGGAGTGTATGTTGGTATAGGTTTCTTTGGGTTGTTTGTCATTCCAGGGCAAAATTTCTTCTTTGGAATTGCAGGTGGGAAGCTGATAGAGCGAATCCGTGCCTTGACATTCCAAAAAGTTGTACACCAGCAAATTAGTTGGTTTGATGATCCTGCAAATTCAAGTGGTGCTATTGGTGCAAGGTTGTCTTCTGATGCTTCAACTGTGAAGGCTCTTGTTGGTGACGCATTAGCCTTGATTGCTCAGAACATAGCAACAATCATAGCAGGACTGATTATAGGTTTCGTAGCTAACTGGAGACTAGCGCTTATAATTATAGCTGTGTCGCCATTGTTGATTGGGCAAGGAATACTCCAAACAAAATTTCTTAAAGGGTTTAGTGCCGATGCCAAGGTTATGTATGAAGAAGCAAGTCAAGTGGCAAATGATGCAATTGGTAGCATTCGAACTGTTGCATCATTTTGTTCTGAAAAGAAGGTGATGGATACGTATGAGAAGAAGTGTCAAGGTCCAATGAAACAAGGAGTACGACTGGGAGTAGTAAGTGGTACAGGTTTTGGCGCTTCGTTTGTAGTAATGTTCTTCACAAATGCATTAATTTTCTATGTTGGAGCTCATCTTGTGAAAAATGGGCACGCCACATTTGAACAAGTATTCAGGGTGTTCTTTGCTCTAACTATTTCAGCGGTGGGGGTTTCACAATCTACTGGCATGGCTCCTGACTCCAACAAAGCCAAGGACTCAGCAGCTTCAATATTTCAAATTCTTGATAGCAAGCCTAAGATCGATTCAAGCAGCAATGATGGCATAACACTACCGAGCATCACTGGAGAAATTGATCTTGATCATGTCAGCTTCAAATACCCCACGAGACCAGATGTGCAGATATTCAGGGACATTTGTTTAAAAATCCCTTCTGGAAAGACTGTTGCTTTGGTTGGAGAGAGTGGCAGTGGGAAATCAACAGTAATAGGCCTTGTAGAGCGATTCTATGACCCCGATACAGGTCGCGTACTATTAGACGGAGTGGAAATCCACAAGTTCAAGCTAAACTGGTTGAGGCAACAGATTGGTTTGGTTGGTCAAGAACCTATTCTCTTTAATGAGTCAATTCGTACCAACATTGCCTATGGCAAGCAGGGAGATGCAACAGAAGAAGAGATCATAGCAGCAACAACTGCATCAAATGCGCACAATTTCATATCTTCATTGCCTCAAGGATATGACACCTCAGTGGGGGAACGAGGTGTTCAGTTATCAGGCGGACAAAAGCAAAGAATAGCCATTGCAAGGGCTATACTAAAGGACCCAAAAATCCTTTTGCTTGACGAAGCTACCAGTGCACTAGACGCAGAATCAGAACGTATAGTACAAGATGCTTTGGACAGAGTTATGGTGAATAGGACAACTGTTGTTGTTGCTCACCGCCTCACCACGATCAAAGGAGCAGATGTAATCGCTGTGGTGAAGAATGGTGTGATTGCTGAGAAGGGAAGCCATGATTCTCTGATGAAGATCACTGATGGGGCTTATGCATCTTTGGTGGCACTTCACACTAGTGCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1229

Amino Acids

132.48

Weight (kDa)

8.97

Isoelectric Point (pI)

32.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 1 - 272 5.5e-61 ABC transporter transmembrane region
ABC_tran PF00005 343 - 490 1.7e-33 ABC transporter
ABC_membrane PF00664 664 - 935 8.6e-60 ABC transporter transmembrane region
ABC_tran PF00005 1004 - 1153 7.1e-32 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2429
AarI CACCTGC 1 cut(s) 2180
AasI GACNNNNNNGTC 1 cut(s) 841
Acc16I TGCGCA 1 cut(s) 3309
Acc36I ACCTGC 2 cut(s) 2003, 2180
Acc65I GGTACC 1 cut(s) 993
AccB1I GGYRCC 2 cut(s) 993, 1764
AccB7I CCANNNNNTGG 3 cut(s) 1136, 1727, 2112
AccII CGCG 1 cut(s) 3129
AccIII TCCGGA 1 cut(s) 1921
AclWI GGATC 8 cut(s) 738, 751, 914, 1121, 1712, 1913, 2005, 2261
AcoI YGGCCR 1 cut(s) 489
AcsI RAATTY 7 cut(s) 140, 228, 1443, 2170, 2275, 2480, 2880
AcuI CTGAAG 1 cut(s) 2023
AcvI CACGTG 1 cut(s) 518
AfeI AGCGCT 1 cut(s) 2424
AfiI CCNNNNNNNGG 7 cut(s) 1136, 1727, 1950, 2112, 3122, 3354, 3408
AflIII ACRYGT 1 cut(s) 515
AhlI ACTAGT 1 cut(s) 3674
AjnI CCWGG 4 cut(s) 438, 825, 1001, 2161
AjuI GAANNNNNNNTTGG 4 cut(s) 549, 581, 2466, 2498
AleI CACNNNNGTG 2 cut(s) 3350, 3675
Alw21I GWGCWC 4 cut(s) 975, 1311, 2734, 3463
Alw26I GTCTC 5 cut(s) 138, 887, 1765, 2410, 2983
Alw44I GTGCAC 1 cut(s) 3459
AlwI GGATC 8 cut(s) 738, 751, 914, 1121, 1712, 1913, 2005, 2261
AlwNI CAGNNNCTG 2 cut(s) 875, 1136
Ama87I CYCGRG 2 cut(s) 890, 1973
Aor13HI TCCGGA 1 cut(s) 1921
Aor51HI AGCGCT 1 cut(s) 2424
AoxI GGCC 6 cut(s) 219, 489, 778, 1004, 1956, 3091
ApaLI GTGCAC 1 cut(s) 3459
ApoI RAATTY 7 cut(s) 140, 228, 1443, 2170, 2275, 2480, 2880
ArsI GACNNNNNNTTYG 2 cut(s) 3034, 3066
AseI ATTAAT 1 cut(s) 2714
Asp700I GAANNNNTTC 1 cut(s) 3210
Asp718I GGTACC 1 cut(s) 993
AspLEI GCGC 5 cut(s) 1472, 1821, 2425, 2681, 3310
AspS9I GGNCC 2 cut(s) 2627, 3424
AsuC2I CCSGG 1 cut(s) 101
AsuII TTCGAA 3 cut(s) 232, 577, 2563
AvaI CYCGRG 2 cut(s) 890, 1973
AvaII GGWCC 2 cut(s) 2627, 3424
AxyI CCTNAGG 1 cut(s) 1344
BaeGI GKGCMC 2 cut(s) 2754, 3463
BalI TGGCCA 1 cut(s) 491
BamHI GGATCC 1 cut(s) 743
BanI GGYRCC 2 cut(s) 993, 1764
BanII GRGCYC 6 cut(s) 106, 975, 1311, 1353, 1713, 2734
BauI CACGAG 1 cut(s) 2986
BbrPI CACGTG 1 cut(s) 518
BbsI GAAGAC 2 cut(s) 2029, 2298
Bbv12I GWGCWC 4 cut(s) 975, 1311, 2734, 3463
BceAI ACGGC 1 cut(s) 31
BciT130I CCWGG 4 cut(s) 440, 827, 1003, 2163
BciVI GTATCC 1 cut(s) 2596
BclI TGATCA 2 cut(s) 753, 2962
BcnI CCSGG 1 cut(s) 101
BcoDI GTCTC 5 cut(s) 138, 887, 1765, 2410, 2983
BcuI ACTAGT 1 cut(s) 3674
BfaI CTAG 5 cut(s) 1440, 1836, 2420, 3464, 3675
BfmI CTRYAG 3 cut(s) 182, 1539, 2007
BfoI RGCGCY 4 cut(s) 1473, 1822, 2426, 2682
BfuAI ACCTGC 2 cut(s) 2003, 2180
BfuI GTATCC 1 cut(s) 2596
BglI GCCNNNNNGGC 1 cut(s) 1348
BglII AGATCT 2 cut(s) 1757, 1787
BmcAI AGTACT 1 cut(s) 1146
Bme1390I CCNGG 5 cut(s) 101, 440, 827, 1003, 2163
Bme18I GGWCC 2 cut(s) 2627, 3424
BmeT110I CYCGRG 2 cut(s) 890, 1973
BmgT120I GGNCC 2 cut(s) 2627, 3424
BmiI GGNNCC 6 cut(s) 571, 745, 995, 1766, 2835, 3426
BmrFI CCNGG 5 cut(s) 101, 440, 827, 1003, 2163
BmrI ACTGGG 2 cut(s) 216, 2660
BmuI ACTGGG 2 cut(s) 216, 2660
BpiI GAAGAC 2 cut(s) 2029, 2298
BpmI CTGGAG 5 cut(s) 318, 957, 1839, 2434, 2967
Bpu14I TTCGAA 3 cut(s) 232, 577, 2563
BpuEI CTTGAG 2 cut(s) 1266, 3318
BpuMI CCSGG 1 cut(s) 101
Bsa29I ATCGAT 2 cut(s) 1187, 2904
BsaAI YACGTR 2 cut(s) 518, 2607
BsaBI GATNNNNATC 2 cut(s) 2961, 3632
BsaI GGTCTC 2 cut(s) 887, 2983
BsaJI CCNNGG 7 cut(s) 348, 438, 826, 1473, 2162, 2508, 2853
BsaWI WCCGGW 2 cut(s) 596, 1921
BsaXI ACNNNNNCTCC 9 cut(s) 34, 345, 375, 768, 798, 2112, 2142, 3555, 3585
Bsc4I CCNNNNNNNGG 7 cut(s) 1136, 1727, 1950, 2112, 3122, 3354, 3408
Bse21I CCTNAGG 1 cut(s) 1344
Bse3DI GCAATG 5 cut(s) 168, 2923, 3240, 3326, 3402
Bse8I GATNNNNATC 2 cut(s) 2961, 3632
BseAI TCCGGA 1 cut(s) 1921
BseBI CCWGG 4 cut(s) 440, 827, 1003, 2163
BseCI ATCGAT 2 cut(s) 1187, 2904
BseDI CCNNGG 7 cut(s) 348, 438, 826, 1473, 2162, 2508, 2853
BseGI GGATG 4 cut(s) 204, 431, 1015, 1483
BseJI GATNNNNATC 2 cut(s) 2961, 3632
BseLI CCNNNNNNNGG 7 cut(s) 1136, 1727, 1950, 2112, 3122, 3354, 3408
BseMI GCAATG 5 cut(s) 168, 2923, 3240, 3326, 3402
BseMII CTCAG 7 cut(s) 1358, 1473, 1505, 2375, 2874, 3363, 3594
BseRI GAGGAG 1 cut(s) 1907
BseSI GKGCMC 2 cut(s) 2754, 3463
BsgI GTGCAG 3 cut(s) 1034, 1725, 3020
Bsh1236I CGCG 1 cut(s) 3129
BshFI GGCC 6 cut(s) 221, 491, 780, 1006, 1958, 3093
BshNI GGYRCC 2 cut(s) 993, 1764
BshVI ATCGAT 2 cut(s) 1187, 2904
BsiHKAI GWGCWC 4 cut(s) 975, 1311, 2734, 3463
BsiHKCI CYCGRG 2 cut(s) 890, 1973
BsiSI CCGG 4 cut(s) 100, 597, 1007, 1922
BslFI GGGAC 4 cut(s) 98, 338, 880, 3026
BslI CCNNNNNNNGG 7 cut(s) 1136, 1727, 1950, 2112, 3122, 3354, 3408
BsmAI GTCTC 5 cut(s) 138, 887, 1765, 2410, 2983
BsmFI GGGAC 4 cut(s) 98, 338, 880, 3026
BsmI GAATGC 3 cut(s) 856, 1579, 2559
BsnI GGCC 6 cut(s) 221, 491, 780, 1006, 1958, 3093
Bso31I GGTCTC 2 cut(s) 887, 2983
BsoBI CYCGRG 2 cut(s) 890, 1973
Bsp119I TTCGAA 3 cut(s) 232, 577, 2563
Bsp1286I GDGCHC 8 cut(s) 106, 975, 1311, 1353, 1713, 2734, 2754, 3463
Bsp13I TCCGGA 1 cut(s) 1921
Bsp1407I TGTACA 1 cut(s) 2239
Bsp19I CCATGG 1 cut(s) 348
BspANI GGCC 6 cut(s) 221, 491, 780, 1006, 1958, 3093
BspCNI CTCAG 7 cut(s) 1357, 1474, 1506, 2374, 2873, 3362, 3595
BspDI ATCGAT 2 cut(s) 1187, 2904
BspEI TCCGGA 1 cut(s) 1921
BspFNI CGCG 1 cut(s) 3129
BspHI TCATGA 2 cut(s) 51, 1627
BspLI GGNNCC 6 cut(s) 571, 745, 995, 1766, 2835, 3426
BspMAI CTGCAG 1 cut(s) 2011
BspMI ACCTGC 2 cut(s) 2003, 2180
BspPI GGATC 8 cut(s) 738, 751, 914, 1121, 1712, 1913, 2005, 2261
BspQI GCTCTTC 1 cut(s) 1291
BspT104I TTCGAA 3 cut(s) 232, 577, 2563
BspT107I GGYRCC 2 cut(s) 993, 1764
BspTNI GGTCTC 2 cut(s) 887, 2983
BsrDI GCAATG 5 cut(s) 168, 2923, 3240, 3326, 3402
BsrGI TGTACA 1 cut(s) 2239
BssECI CCNNGG 7 cut(s) 348, 438, 826, 1473, 2162, 2508, 2853
BssSI CACGAG 1 cut(s) 2986
BssT1I CCWWGG 4 cut(s) 348, 1473, 2508, 2853
Bst2BI CACGAG 1 cut(s) 2986
Bst2UI CCWGG 4 cut(s) 440, 827, 1003, 2163
Bst6I CTCTTC 3 cut(s) 1281, 1291, 3270
BstAPI GCANNNNNTGC 3 cut(s) 2546, 3296, 3305
BstAUI TGTACA 1 cut(s) 2239
BstBAI YACGTR 2 cut(s) 518, 2607
BstBI TTCGAA 3 cut(s) 232, 577, 2563
BstC8I GCNNGC 9 cut(s) 528, 544, 609, 1311, 1679, 1956, 2754, 2894, 3254
BstDSI CCRYGG 1 cut(s) 348
BstF5I GGATG 4 cut(s) 204, 431, 1015, 1483
BstFNI CGCG 1 cut(s) 3129
BstH2I RGCGCY 4 cut(s) 1473, 1822, 2426, 2682
BstHHI GCGC 5 cut(s) 1472, 1821, 2425, 2681, 3310
BstMAI GTCTC 5 cut(s) 138, 887, 1765, 2410, 2983
BstNI CCWGG 4 cut(s) 440, 827, 1003, 2163
BstNSI RCATGY 1 cut(s) 1043
BstSCI CCNGG 5 cut(s) 99, 438, 825, 1001, 2161
BstSFI CTRYAG 3 cut(s) 182, 1539, 2007
BstSLI GKGCMC 2 cut(s) 2754, 3463
BstSNI TACGTA 1 cut(s) 2607
BstUI CGCG 1 cut(s) 3129
BstV2I GAAGAC 2 cut(s) 2029, 2298
BstX2I RGATCY 4 cut(s) 743, 1757, 1787, 1997
BstYI RGATCY 4 cut(s) 743, 1757, 1787, 1997
Bsu15I ATCGAT 2 cut(s) 1187, 2904
Bsu36I CCTNAGG 1 cut(s) 1344
BsuI GTATCC 1 cut(s) 2596
BsuRI GGCC 6 cut(s) 221, 491, 780, 1006, 1958, 3093
BsuTUI ATCGAT 2 cut(s) 1187, 2904
BtgI CCRYGG 1 cut(s) 348
BtgZI GCGATG 1 cut(s) 1538
BtsCI GGATG 4 cut(s) 204, 431, 1015, 1483
BtsI GCAGTG 3 cut(s) 1508, 1788, 3076
BtsIMutI CAGTG 9 cut(s) 294, 1104, 1508, 1788, 2943, 3076, 3357, 3463, 3636
BveI ACCTGC 2 cut(s) 2003, 2180
Cac8I GCNNGC 9 cut(s) 528, 544, 609, 1311, 1679, 1956, 2754, 2894, 3254
CaiI CAGNNNCTG 2 cut(s) 875, 1136
CciI TCATGA 2 cut(s) 51, 1627
CfoI GCGC 5 cut(s) 1472, 1821, 2425, 2681, 3310
Cfr13I GGNCC 2 cut(s) 2627, 3424
ClaI ATCGAT 2 cut(s) 1187, 2904
CseI GACGC 3 cut(s) 64, 2351, 3476
CspCI CAANNNNNGTGG 6 cut(s) 664, 699, 1572, 1607, 2517, 2552
DraI TTTAAA 2 cut(s) 1431, 3024
DrdI GACNNNNNNGTC 1 cut(s) 841
DseDI GACNNNNNNGTC 1 cut(s) 841
EaeI YGGCCR 1 cut(s) 489
Eam1104I CTCTTC 3 cut(s) 1281, 1291, 3270
EarI CTCTTC 3 cut(s) 1281, 1291, 3270
EciI GGCGGA 2 cut(s) 1664, 3396
Ecl136II GAGCTC 3 cut(s) 973, 1309, 2732
Eco105I TACGTA 1 cut(s) 2607
Eco130I CCWWGG 4 cut(s) 348, 1473, 2508, 2853
Eco147I AGGCCT 1 cut(s) 3093
Eco24I GRGCYC 6 cut(s) 106, 975, 1311, 1353, 1713, 2734
Eco31I GGTCTC 2 cut(s) 887, 2983
Eco47I GGWCC 2 cut(s) 2627, 3424
Eco47III AGCGCT 1 cut(s) 2424
Eco53kI GAGCTC 3 cut(s) 973, 1309, 2732
Eco57I CTGAAG 1 cut(s) 2023
Eco72I CACGTG 1 cut(s) 518
Eco81I CCTNAGG 1 cut(s) 1344
Eco88I CYCGRG 2 cut(s) 890, 1973
EcoICRI GAGCTC 3 cut(s) 973, 1309, 2732
EcoO109I RGGNCCY 1 cut(s) 3424
EcoRI GAATTC 2 cut(s) 228, 1443
EcoRII CCWGG 4 cut(s) 438, 825, 1001, 2161
EcoT14I CCWWGG 4 cut(s) 348, 1473, 2508, 2853
EcoT22I ATGCAT 3 cut(s) 856, 2713, 3655
EcoT38I GRGCYC 6 cut(s) 106, 975, 1311, 1353, 1713, 2734
ErhI CCWWGG 4 cut(s) 348, 1473, 2508, 2853
FalI AAGNNNNNCTT 2 cut(s) 2290, 2322
FaqI GGGAC 4 cut(s) 98, 338, 880, 3026
FauI CCCGC 2 cut(s) 469, 1018
FauNDI CATATG 2 cut(s) 734, 1261
FbaI TGATCA 2 cut(s) 753, 2962
FokI GGATG 4 cut(s) 211, 438, 1022, 1490
FriOI GRGCYC 6 cut(s) 106, 975, 1311, 1353, 1713, 2734
FspAI RTGCGCAY 1 cut(s) 3309
FspBI CTAG 5 cut(s) 1440, 1836, 2420, 3464, 3675
FspI TGCGCA 1 cut(s) 3309
GlaI GCGC 5 cut(s) 1471, 1820, 2424, 2680, 3309
GsuI CTGGAG 5 cut(s) 318, 957, 1839, 2434, 2967
HaeII RGCGCY 4 cut(s) 1473, 1822, 2426, 2682
HaeIII GGCC 6 cut(s) 221, 491, 780, 1006, 1958, 3093
HapII CCGG 4 cut(s) 100, 597, 1007, 1922
HgaI GACGC 3 cut(s) 64, 2351, 3476
HhaI GCGC 5 cut(s) 1472, 1821, 2425, 2681, 3310
Hin6I GCGC 5 cut(s) 1470, 1819, 2423, 2679, 3308
HinP1I GCGC 5 cut(s) 1470, 1819, 2423, 2679, 3308
HincII GTYRAC 2 cut(s) 513, 1095
HindII GTYRAC 2 cut(s) 513, 1095
HindIII AAGCTT 1 cut(s) 235
HpaII CCGG 4 cut(s) 100, 597, 1007, 1922
Hpy166II GTNNAC 7 cut(s) 148, 513, 521, 1095, 1394, 2242, 3461
Hpy8I GTNNAC 7 cut(s) 148, 513, 521, 1095, 1394, 2242, 3461
Hpy99I CGWCG 1 cut(s) 11
HpyAV CCTTC 7 cut(s) 1261, 1646, 1906, 2320, 2587, 3042, 3601
HpyCH4IV ACGT 6 cut(s) 517, 695, 981, 1254, 2606, 3481
HpySE526I ACGT 6 cut(s) 517, 695, 981, 1254, 2606, 3481
HspAI GCGC 5 cut(s) 1470, 1819, 2423, 2679, 3308
Kpn2I TCCGGA 1 cut(s) 1921
KpnI GGTACC 1 cut(s) 997
Ksp22I TGATCA 2 cut(s) 753, 2962
LguI GCTCTTC 1 cut(s) 1291
LmnI GCTCC 9 cut(s) 569, 970, 1489, 1655, 1858, 1924, 2729, 2839, 3563
MaeI CTAG 5 cut(s) 1440, 1836, 2420, 3464, 3675
MaeII ACGT 6 cut(s) 517, 695, 981, 1254, 2606, 3481
MaeIII GTNAC 2 cut(s) 202, 2339
MfeI CAATTG 3 cut(s) 1302, 1413, 2550
MflI RGATCY 4 cut(s) 743, 1757, 1787, 1997
MhlI GDGCHC 8 cut(s) 106, 975, 1311, 1353, 1713, 2734, 2754, 3463
MlsI TGGCCA 1 cut(s) 491
MluNI TGGCCA 1 cut(s) 491
MlyI GAGTC 5 cut(s) 1493, 2096, 2834, 2852, 3233
MmeI TCCRAC 7 cut(s) 176, 547, 664, 1467, 2707, 2868, 3037
Mox20I TGGCCA 1 cut(s) 491
Mph1103I ATGCAT 3 cut(s) 856, 2713, 3655
MroI TCCGGA 1 cut(s) 1921
MroXI GAANNNNTTC 1 cut(s) 3210
MscI TGGCCA 1 cut(s) 491
MslI CAYNNNNRTG 3 cut(s) 2066, 3350, 3675
Msp20I TGGCCA 1 cut(s) 491
MspA1I CMGCKG 2 cut(s) 872, 2804
MspI CCGG 4 cut(s) 100, 597, 1007, 1922
MspR9I CCNGG 5 cut(s) 101, 440, 827, 1003, 2163
MunI CAATTG 3 cut(s) 1302, 1413, 2550
Mva1269I GAATGC 3 cut(s) 856, 1579, 2559
MvaI CCWGG 4 cut(s) 440, 827, 1003, 2163
MvnI CGCG 1 cut(s) 3129
NciI CCSGG 1 cut(s) 101
NcoI CCATGG 1 cut(s) 348
NdeI CATATG 2 cut(s) 734, 1261
NlaIV GGNNCC 6 cut(s) 571, 745, 995, 1766, 2835, 3426
NmuCI GTSAC 1 cut(s) 2339
NsbI TGCGCA 1 cut(s) 3309
NsiI ATGCAT 3 cut(s) 856, 2713, 3655
NspI RCATGY 1 cut(s) 1043
NspV TTCGAA 3 cut(s) 232, 577, 2563
OliI CACNNNNGTG 2 cut(s) 3350, 3675
PaeR7I CTCGAG 1 cut(s) 890
PagI TCATGA 2 cut(s) 51, 1627
PaqCI CACCTGC 1 cut(s) 2180
PceI AGGCCT 1 cut(s) 3093
PciSI GCTCTTC 1 cut(s) 1291
PcsI WCGNNNNNNNCGW 1 cut(s) 523
PctI GAATGC 3 cut(s) 856, 1579, 2559
PdmI GAANNNNTTC 1 cut(s) 3210
PfeI GAWTC 7 cut(s) 1029, 1225, 2211, 2906, 3105, 3473, 3620
PflMI CCANNNNNTGG 3 cut(s) 1136, 1727, 2112
PleI GAGTC 5 cut(s) 1492, 2096, 2834, 2852, 3232
PmaCI CACGTG 1 cut(s) 518
PmlI CACGTG 1 cut(s) 518
PpsI GAGTC 5 cut(s) 1492, 2096, 2834, 2852, 3232
Ppu21I YACGTR 2 cut(s) 518, 2607
PpuMI RGGWCCY 1 cut(s) 3424
PshBI ATTAAT 1 cut(s) 2714
PsiI TTATAA 1 cut(s) 2429
Psp124BI GAGCTC 3 cut(s) 975, 1311, 2734
Psp5II RGGWCCY 1 cut(s) 3424
Psp6I CCWGG 4 cut(s) 438, 825, 1001, 2161
PspCI CACGTG 1 cut(s) 518
PspGI CCWGG 4 cut(s) 438, 825, 1001, 2161
PspN4I GGNNCC 6 cut(s) 571, 745, 995, 1766, 2835, 3426
PspPI GGNCC 2 cut(s) 2627, 3424
PspPPI RGGWCCY 1 cut(s) 3424
PsrI GAACNNNNNNTAC 2 cut(s) 3471, 3503
PstI CTGCAG 1 cut(s) 2011
PstNI CAGNNNCTG 2 cut(s) 875, 1136
PsuI RGATCY 4 cut(s) 743, 1757, 1787, 1997
PvuII CAGCTG 1 cut(s) 872
RseI CAYNNNNRTG 3 cut(s) 2066, 3350, 3675
SacI GAGCTC 3 cut(s) 975, 1311, 2734
SapI GCTCTTC 1 cut(s) 1291
Sau96I GGNCC 2 cut(s) 2627, 3424
ScaI AGTACT 1 cut(s) 1146
SchI GAGTC 5 cut(s) 1493, 2096, 2834, 2852, 3233
ScrFI CCNGG 5 cut(s) 101, 440, 827, 1003, 2163
SduI GDGCHC 8 cut(s) 106, 975, 1311, 1353, 1713, 2734, 2754, 3463
SfcI CTRYAG 3 cut(s) 182, 1539, 2007
Sfr274I CTCGAG 1 cut(s) 890
SfuI TTCGAA 3 cut(s) 232, 577, 2563
SinI GGWCC 2 cut(s) 2627, 3424
SlaI CTCGAG 1 cut(s) 890
SmiMI CAYNNNNRTG 3 cut(s) 2066, 3350, 3675
SmlI CTYRAG 3 cut(s) 890, 1281, 3333
SmoI CTYRAG 3 cut(s) 890, 1281, 3333
SnaBI TACGTA 1 cut(s) 2607
SpeI ACTAGT 1 cut(s) 3674
SseBI AGGCCT 1 cut(s) 3093
SspI AATATT 1 cut(s) 2874
SspMI CTAG 5 cut(s) 1440, 1836, 2420, 3464, 3675
SstI GAGCTC 3 cut(s) 975, 1311, 2734
StuI AGGCCT 1 cut(s) 3093
StyD4I CCNGG 5 cut(s) 99, 438, 825, 1001, 2161
StyI CCWWGG 4 cut(s) 348, 1473, 2508, 2853
TaiI ACGT 6 cut(s) 520, 698, 984, 1257, 2609, 3484
TatI WGTACW 7 cut(s) 147, 240, 653, 1144, 1870, 2239, 3487
TauI GCSGC 1 cut(s) 1819
TfiI GAWTC 7 cut(s) 1029, 1225, 2211, 2906, 3105, 3473, 3620
TscAI CASTG 9 cut(s) 301, 1104, 1515, 1788, 2950, 3076, 3357, 3463, 3643
TseFI GTSAC 1 cut(s) 2339
Tsp45I GTSAC 1 cut(s) 2339
TspGWI ACGGA 2 cut(s) 2204, 3156
TspRI CASTG 9 cut(s) 301, 1104, 1515, 1788, 2950, 3076, 3357, 3463, 3643
Van91I CCANNNNNTGG 3 cut(s) 1136, 1727, 2112
VneI GTGCAC 1 cut(s) 3459
VpaK11BI GGWCC 2 cut(s) 2627, 3424
VspI ATTAAT 1 cut(s) 2714
XapI RAATTY 7 cut(s) 140, 228, 1443, 2170, 2275, 2480, 2880
XceI RCATGY 1 cut(s) 1043
XcmI CCANNNNNNNNNTGG 1 cut(s) 1951
XhoI CTCGAG 1 cut(s) 890
XmnI GAANNNNTTC 1 cut(s) 3210
XspI CTAG 5 cut(s) 1440, 1836, 2420, 3464, 3675
ZrmI AGTACT 1 cut(s) 1146
Zsp2I ATGCAT 3 cut(s) 856, 2713, 3655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.