RLG00000031945

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0001944
Physical Location & Seq
Reverse (-)
9709014 .. 9714472
5459 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031945

Sequence Viewer

Length: 3873 bp
ATGGAAGGAGGAGGAGGAGGAGGAGATGGAGATGGAAGAGCCAAAGTTAATGATCCAGACAAGCAGAAGGTCCCGTTCTACAAGCTGTTTCTGTTCGCAGACCAATATGACGTGGGGTTGATGATCGTCGGGAGTATCTGTGCCATCGGAAACGGGCTGTCGCAGCCGTTCATGACGCTCATCTTCGGCAGTCTTATCAATACTTTCGGACATACTGACCGGGCTCATATCGTCCCCATGATTTCTAAGGTGTCTCTAAAATTTGTGTACTTGGGCATTGGTACTGGCATTGCTGCATTTCTACAGGTATCATGTTGGATGGTAACTGGGGAAAGACAGGCCACTCGAATTCGAAGCTTGTACTTGAAAGCAATTTTAAGACAGGACATTGGATATTTTGACACCGAAACTAACACTGGAGAGATCATTGGCAGAATGTCAGGGGACACAATTCTCATTCAAGATGCCATGGGAGAAAAGGTGGGGAAGTTCATTCAACTCCTTTCAACTTTTGTAGGCGGTTTTGTAATTGCTTTAGTCAAAGGATGGCTTCTCACCCTGGTATTACTGTCATGTATTCCCGCTATTGTCTTTGCTGGTGGAATGATGGCCATTATTGTTTCCAAAATGTCAACACGTGGACAGCGTGCTTATGCGGAAGCTGGCAGTATAGTAGAACAAACAGTTGGAGCCATTCGAACAGTTGCATCTTTTACCGGAGAGAAGCAAGCGATAGAAAAATATAACAAGAAGCTAAAGGTTGCCTACAATAGTACAGTTCAACAAGGACTTGCCACAGGAATTGGACTTGGTACGTTCATACTTATTGTCTTTGGGACTTATGGACTTGCCATATGGTATGGATCCAAAATGATCATCGAAAAAGGATATAATGGAGGCCAAGTCATCAATGTTATATTTGCAATAATGACGGGTGGAATGTGCCTGGGGCAGACATCACCGTCTTTGAATGCATTTGCAGCAGGGACAGCTGCTGCATACAAAATGCTCGAGACAATCAAACGAACGCCGAAGATTGATCCTTATGATACCTCTGGAGTTGTATTGGACGATATTAAAGGAGAGGTGGAGCTCAAAGACGTCTATTTCAGGTACCCTGCCAGGCCGGATGTGCAGATTTTTGCGGGATTCTCGTTGCATGTTCCGAGTGGCACAACCACTGCTTTGGTTGGGCAGAGTGGAAGTGGGAAGTCAACAGTGATAGGCTTGGTCGAGAGGTTTTATGATCCAGAAGCTGGTGAAGTACTTATAGATGGTGTCGATTTGAAGAAGTTGCATCTGAGATCGATAAGGGAGAAGATTGGGCTTGTAAGTCAAGAGCCGAATCTTTTTACTACAACAATAAGGGAGAACGTAGCATATGGGAAGGAAAATGCAACTCAAGAAGAGATTAGAAGAGCAATTGAGCTCGCAAATGCAGCAAAGTTTATTGACAAGTTGCCTCAGGGGCTCGACACAATGGTAGGTGAGCATGGAACATCGTTATCGGGTGGACAAAAGCAAAGAATTGCAATTGCAAGAGCCATTTTAAAGAACCCTAGAATTCTACTTCTGGACGAAGCAACAAGCGCCTTGGATGCTGAGTCGGAGCGAATTGTTCAAGATGCACTGCTGAGATTGATGTCAAATAGAACGACTATAGTTGTTGCACATCGCTTAACAACGATTAGGAATGCTGATGCAATAGCTGTGGTGCATAAAGGGAAAATTGTTGAAATAGGTAAGAGCATTTCCATAAGGTACACCATCATTCTCATTCGTACAATTAATAAACTTGTTCCTCAAGTAACATCATCGTTTTGTATTGTAGGAACTCATGATGACTTGACCCAAAACCCAGAAGGAGCTTACAGCCAACTAATCCGCCTGCAAGAAAGAGCTAAAGAAAAAGGTGCAGAGCCCTCTGATCCAGATAATGGTTTGGATATAGATAGGACAATGAGTAGATCTGGGAGCCAGAGACTTTCAGCAGTGAGATCTTTAAGCAAAGGTTCATCAGGTAGTCGGCGCTCATTCACTATTACTAGCTTTGGTGTTCCTGCTCCAGTTAATTGTGAAGTACAAGTAGAAGAAGAAGATGAGGAGAACCGTGTGAAAACGAAGGTTGATCCGGAGCAACGCAAAAAAGTTTCCATCAAAAGGCTGGCCTATTTGAATAAACCCGAGCTTCCAGTTTTGCTGCTTGGATCTATTGCTGCAGCAGGTCATGGAGTGATTTTTCCTGTCTTCGGCTTACTACTCTCAAAAGCCATCAAGATGTTCTATGAACCGCATAATGAGCTGCGAAAAGACTCCAAAGTTTGGGCAGGAGTGTATGTTGGTATAGGTTTCTTTGGGTTGTTTGTCATTCCAGGGCAAAATTTCTTCTTTGGAATTGCAGGTGGGAAGCTGATAGAGCGAATCCGTGCCTTGACATTCCAAAAAGTTGTACACCAGCAAATTAGTTGTGGTGCTATTGGTGCAAGGTTGTCTTCTGATGCTTCAACTGTGAAGGCTCTTGTTGGTGACGCATTAGCCTTGATTGCTCAGAACATAGCAACAATCATAGCAGGACTGATTATAGGTTTCGTAGCTAACTGGAGACTAGCGCTTATAATTATAGCTGTGTCGCCATTGTTGATTGGGCAAGGAATACTCCAAACAAAATTTCTTAAAGGGTTTAGTGCCGATGCCAAGGTTATGTATGAAGAAGCAAGTCAAGTGGCAAATGATGCAATTGGTAGCATTCGAACTGTTGCATCATTTTGTTCTGAAAAGAAGGTGATGGATACGTATGAGAAGAAGTGTCAAGGTCCAATGAAACAAGGAGTACGACTGGGAGTAGTAAGTGGTACAGGTTTTGGCGCTTCGTTTGTAGTAATGTTCTTCACAAATGCATTAATTTTCTATGTTGGAGCTCATCTTGTGAAAAATGGGCACGCCACATTTGAACAAGTATTCAGGGTGTTCTTTGCTCTAACTATTTCAGCGGTGGGGGTTTCACAATCTACTGGCATGGCTCCTGACTCCAACAAAGCCAAGGACTCAGCAGCTTCAATATTTCAAATTCTTGATAGCAAGCCTAAGATCGATTCAAGCAGCAATGATGGCATAACACTACCGAGCATCACTGGAGAAATTGATCTTGATCATGTCAGCTTCAAATACCCCACGAGACCAGATGTGCAGATATTCAGGGACATTTGTTTAAAAATCCCTTCTGGAAAGACTGTTGCTTTGGTTGGAGAGAGTGGCAGTGGGAAATCAACAGTAATAGGCCTTGTAGAGCGATTCTATGACCCCGATACAGGTCGCGTACTATTAGACGGAGTGGAAATCCACAAGTTCAAGCTAAACTGGTTGAGGCAACAGATTGGTTTGGTTGGTCAAGAACCTATTCTCTTTAATGAGTCAATTCGTACCAACATTGCCTATGGCAAGCAGGGAGATGCAACAGAAGAAGAGATCATAGCAGCAACAACTGCATCAAATGCGCACAATTTCATATCTTCATTGCCTCAAGGATATGACACCTCAGTGGGGGAACGAGGTGTTCAGTTATCAGGCGGACAAAAGCAAAGAATAGCCATTGCAAGGGCTATACTAAAGGACCCAAAAATCCTTTTGCTTGACGAAGCTACCAGTGCACTAGACGCAGAATCAGAACGTATAGTACAAGATGCTTTGGACAGAGTTATGGTGAATAGGACAACTGTTGTTGTTGCTCACCGCCTCACCACGATCAAAGGAGCAGATGTAATCGCTGTGGTGAAGAATGGTGTGATTGCTGAGAAGGGAAGCCATGATTCTCTGATGAAGATCACTGATGGGGCTTATGCATCTTTGGTGGCACTTCACACTAGTGCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1291

Amino Acids

139.05

Weight (kDa)

9.0

Isoelectric Point (pI)

31.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 41 - 312 2.4e-61 ABC transporter transmembrane region
ABC_tran PF00005 383 - 530 1.8e-33 ABC transporter
ABC_membrane PF00664 734 - 997 1.1e-50 ABC transporter transmembrane region
ABC_tran PF00005 1066 - 1215 7.6e-32 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2615
AarI CACCTGC 1 cut(s) 2390
AasI GACNNNNNNGTC 1 cut(s) 961
AatII GACGTC 1 cut(s) 1104
Acc16I TGCGCA 1 cut(s) 3495
Acc36I ACCTGC 2 cut(s) 2213, 2390
Acc65I GGTACC 1 cut(s) 1113
AccB1I GGYRCC 1 cut(s) 1113
AccB7I CCANNNNNTGG 3 cut(s) 1256, 1937, 2322
AccII CGCG 1 cut(s) 3315
AccIII TCCGGA 1 cut(s) 2131
AciI CCGC 9 cut(s) 519, 582, 656, 1145, 1885, 2291, 2990, 3567, 3730
AclWI GGATC 8 cut(s) 47, 858, 871, 1034, 1241, 1922, 2123, 2215
AcoI YGGCCR 1 cut(s) 609
AcsI RAATTY 6 cut(s) 260, 348, 1563, 2380, 2666, 3066
AcvI CACGTG 1 cut(s) 638
AcyI GRCGYC 1 cut(s) 1101
AfeI AGCGCT 1 cut(s) 2610
AfiI CCNNNNNNNGG 8 cut(s) 1256, 1937, 2160, 2249, 2322, 3308, 3540, 3594
AflIII ACRYGT 1 cut(s) 635
AhlI ACTAGT 1 cut(s) 3860
AjiI CACGTC 1 cut(s) 112
AjnI CCWGG 4 cut(s) 558, 945, 1121, 2371
AjuI GAANNNNNNNTTGG 4 cut(s) 669, 701, 2652, 2684
AleI CACNNNNGTG 2 cut(s) 3536, 3861
Alw21I GWGCWC 4 cut(s) 1095, 1431, 2920, 3649
Alw26I GTCTC 5 cut(s) 258, 1007, 1975, 2596, 3169
Alw44I GTGCAC 1 cut(s) 3645
AlwI GGATC 8 cut(s) 47, 858, 871, 1034, 1241, 1922, 2123, 2215
AlwNI CAGNNNCTG 2 cut(s) 995, 1256
Ama87I CYCGRG 2 cut(s) 1010, 2183
Aor13HI TCCGGA 1 cut(s) 2131
Aor51HI AGCGCT 1 cut(s) 2610
AoxI GGCC 6 cut(s) 339, 609, 898, 1124, 2166, 3277
ApaLI GTGCAC 1 cut(s) 3645
ApoI RAATTY 6 cut(s) 260, 348, 1563, 2380, 2666, 3066
ArsI GACNNNNNNTTYG 2 cut(s) 3220, 3252
AseI ATTAAT 2 cut(s) 1788, 2900
Asp700I GAANNNNTTC 1 cut(s) 3396
Asp718I GGTACC 1 cut(s) 1113
AspLEI GCGC 5 cut(s) 1592, 2031, 2611, 2867, 3496
AspS9I GGNCC 3 cut(s) 70, 2813, 3610
AsuC2I CCSGG 1 cut(s) 221
AsuII TTCGAA 3 cut(s) 352, 697, 2749
AvaI CYCGRG 2 cut(s) 1010, 2183
AvaII GGWCC 3 cut(s) 70, 2813, 3610
AxyI CCTNAGG 1 cut(s) 1464
BaeGI GKGCMC 2 cut(s) 2940, 3649
BalI TGGCCA 1 cut(s) 611
BamHI GGATCC 1 cut(s) 863
BanI GGYRCC 1 cut(s) 1113
BanII GRGCYC 6 cut(s) 226, 1095, 1431, 1473, 1923, 2920
BauI CACGAG 1 cut(s) 3172
BbrPI CACGTG 1 cut(s) 638
BbsI GAAGAC 2 cut(s) 2239, 2484
Bbv12I GWGCWC 4 cut(s) 1095, 1431, 2920, 3649
BceAI ACGGC 1 cut(s) 151
BciT130I CCWGG 4 cut(s) 560, 947, 1123, 2373
BciVI GTATCC 1 cut(s) 2782
BclI TGATCA 2 cut(s) 873, 3148
BcnI CCSGG 1 cut(s) 221
BcoDI GTCTC 5 cut(s) 258, 1007, 1975, 2596, 3169
BcuI ACTAGT 1 cut(s) 3860
BfaI CTAG 5 cut(s) 1560, 2046, 2606, 3650, 3861
BfmI CTRYAG 3 cut(s) 302, 1659, 2217
BfoI RGCGCY 4 cut(s) 1593, 2032, 2612, 2868
BfuAI ACCTGC 2 cut(s) 2213, 2390
BfuI GTATCC 1 cut(s) 2782
BglI GCCNNNNNGGC 1 cut(s) 1468
BglII AGATCT 2 cut(s) 1967, 1997
BmcAI AGTACT 1 cut(s) 1266
Bme1390I CCNGG 5 cut(s) 221, 560, 947, 1123, 2373
Bme18I GGWCC 3 cut(s) 70, 2813, 3610
BmeT110I CYCGRG 2 cut(s) 1010, 2183
BmgBI CACGTC 1 cut(s) 112
BmgT120I GGNCC 3 cut(s) 70, 2813, 3610
BmiI GGNNCC 7 cut(s) 72, 691, 865, 1115, 1976, 3021, 3612
BmrFI CCNGG 5 cut(s) 221, 560, 947, 1123, 2373
BmrI ACTGGG 2 cut(s) 336, 2846
BmuI ACTGGG 2 cut(s) 336, 2846
BpiI GAAGAC 2 cut(s) 2239, 2484
BpmI CTGGAG 5 cut(s) 438, 1077, 2049, 2620, 3153
Bpu14I TTCGAA 3 cut(s) 352, 697, 2749
BpuEI CTTGAG 3 cut(s) 1386, 1788, 3504
BpuMI CCSGG 1 cut(s) 221
Bsa29I ATCGAT 2 cut(s) 1307, 3090
BsaAI YACGTR 2 cut(s) 638, 2793
BsaBI GATNNNNATC 2 cut(s) 3147, 3818
BsaHI GRCGYC 1 cut(s) 1101
BsaI GGTCTC 1 cut(s) 3169
BsaJI CCNNGG 7 cut(s) 468, 558, 946, 1593, 2372, 2694, 3039
BsaWI WCCGGW 2 cut(s) 716, 2131
Bsc4I CCNNNNNNNGG 8 cut(s) 1256, 1937, 2160, 2249, 2322, 3308, 3540, 3594
Bse21I CCTNAGG 1 cut(s) 1464
Bse3DI GCAATG 5 cut(s) 288, 3109, 3426, 3512, 3588
Bse8I GATNNNNATC 2 cut(s) 3147, 3818
BseAI TCCGGA 1 cut(s) 2131
BseBI CCWGG 4 cut(s) 560, 947, 1123, 2373
BseCI ATCGAT 2 cut(s) 1307, 3090
BseDI CCNNGG 7 cut(s) 468, 558, 946, 1593, 2372, 2694, 3039
BseGI GGATG 4 cut(s) 324, 551, 1135, 1603
BseJI GATNNNNATC 2 cut(s) 3147, 3818
BseLI CCNNNNNNNGG 8 cut(s) 1256, 1937, 2160, 2249, 2322, 3308, 3540, 3594
BseMI GCAATG 5 cut(s) 288, 3109, 3426, 3512, 3588
BseMII CTCAG 8 cut(s) 1292, 1478, 1593, 1625, 2561, 3060, 3549, 3780
BseRI GAGGAG 6 cut(s) 24, 27, 30, 33, 36, 2117
BseSI GKGCMC 2 cut(s) 2940, 3649
BsgI GTGCAG 3 cut(s) 1154, 1935, 3206
Bsh1236I CGCG 1 cut(s) 3315
BshFI GGCC 6 cut(s) 341, 611, 900, 1126, 2168, 3279
BshNI GGYRCC 1 cut(s) 1113
BshVI ATCGAT 2 cut(s) 1307, 3090
BsiHKAI GWGCWC 4 cut(s) 1095, 1431, 2920, 3649
BsiHKCI CYCGRG 2 cut(s) 1010, 2183
BsiSI CCGG 4 cut(s) 220, 717, 1127, 2132
BslFI GGGAC 6 cut(s) 56, 218, 458, 850, 1000, 3212
BslI CCNNNNNNNGG 8 cut(s) 1256, 1937, 2160, 2249, 2322, 3308, 3540, 3594
BsmAI GTCTC 5 cut(s) 258, 1007, 1975, 2596, 3169
BsmFI GGGAC 6 cut(s) 56, 218, 458, 850, 1000, 3212
BsmI GAATGC 3 cut(s) 976, 1699, 2745
BsnI GGCC 6 cut(s) 341, 611, 900, 1126, 2168, 3279
Bso31I GGTCTC 1 cut(s) 3169
BsoBI CYCGRG 2 cut(s) 1010, 2183
Bsp119I TTCGAA 3 cut(s) 352, 697, 2749
Bsp1286I GDGCHC 8 cut(s) 226, 1095, 1431, 1473, 1923, 2920, 2940, 3649
Bsp13I TCCGGA 1 cut(s) 2131
Bsp1407I TGTACA 1 cut(s) 2449
Bsp19I CCATGG 1 cut(s) 468
BspACI CCGC 9 cut(s) 519, 582, 656, 1145, 1885, 2291, 2990, 3567, 3730
BspANI GGCC 6 cut(s) 341, 611, 900, 1126, 2168, 3279
BspCNI CTCAG 8 cut(s) 1293, 1477, 1594, 1626, 2560, 3059, 3548, 3781
BspDI ATCGAT 2 cut(s) 1307, 3090
BspEI TCCGGA 1 cut(s) 2131
BspFNI CGCG 1 cut(s) 3315
BspHI TCATGA 2 cut(s) 171, 1837
BspLI GGNNCC 7 cut(s) 72, 691, 865, 1115, 1976, 3021, 3612
BspMAI CTGCAG 1 cut(s) 2221
BspMI ACCTGC 2 cut(s) 2213, 2390
BspPI GGATC 8 cut(s) 47, 858, 871, 1034, 1241, 1922, 2123, 2215
BspQI GCTCTTC 2 cut(s) 31, 1411
BspT104I TTCGAA 3 cut(s) 352, 697, 2749
BspT107I GGYRCC 1 cut(s) 1113
BspTNI GGTCTC 1 cut(s) 3169
BsrDI GCAATG 5 cut(s) 288, 3109, 3426, 3512, 3588
BsrGI TGTACA 1 cut(s) 2449
BssECI CCNNGG 7 cut(s) 468, 558, 946, 1593, 2372, 2694, 3039
BssNI GRCGYC 1 cut(s) 1101
BssSI CACGAG 1 cut(s) 3172
BssT1I CCWWGG 4 cut(s) 468, 1593, 2694, 3039
Bst2BI CACGAG 1 cut(s) 3172
Bst2UI CCWGG 4 cut(s) 560, 947, 1123, 2373
Bst6I CTCTTC 4 cut(s) 31, 1401, 1411, 3456
BstACI GRCGYC 1 cut(s) 1101
BstAPI GCANNNNNTGC 3 cut(s) 2732, 3482, 3491
BstAUI TGTACA 1 cut(s) 2449
BstBAI YACGTR 2 cut(s) 638, 2793
BstBI TTCGAA 3 cut(s) 352, 697, 2749
BstC8I GCNNGC 9 cut(s) 648, 664, 729, 1431, 1889, 2166, 2940, 3080, 3440
BstDSI CCRYGG 1 cut(s) 468
BstF5I GGATG 4 cut(s) 324, 551, 1135, 1603
BstFNI CGCG 1 cut(s) 3315
BstH2I RGCGCY 4 cut(s) 1593, 2032, 2612, 2868
BstHHI GCGC 5 cut(s) 1592, 2031, 2611, 2867, 3496
BstMAI GTCTC 5 cut(s) 258, 1007, 1975, 2596, 3169
BstNI CCWGG 4 cut(s) 560, 947, 1123, 2373
BstNSI RCATGY 1 cut(s) 1163
BstSCI CCNGG 5 cut(s) 219, 558, 945, 1121, 2371
BstSFI CTRYAG 3 cut(s) 302, 1659, 2217
BstSLI GKGCMC 2 cut(s) 2940, 3649
BstSNI TACGTA 1 cut(s) 2793
BstUI CGCG 1 cut(s) 3315
BstV2I GAAGAC 2 cut(s) 2239, 2484
BstX2I RGATCY 4 cut(s) 863, 1967, 1997, 2207
BstXI CCANNNNNNTGG 1 cut(s) 1186
BstYI RGATCY 4 cut(s) 863, 1967, 1997, 2207
Bsu15I ATCGAT 2 cut(s) 1307, 3090
Bsu36I CCTNAGG 1 cut(s) 1464
BsuI GTATCC 1 cut(s) 2782
BsuRI GGCC 6 cut(s) 341, 611, 900, 1126, 2168, 3279
BsuTUI ATCGAT 2 cut(s) 1307, 3090
BtgI CCRYGG 1 cut(s) 468
BtgZI GCGATG 1 cut(s) 1658
BtrI CACGTC 1 cut(s) 112
BtsCI GGATG 4 cut(s) 324, 551, 1135, 1603
BtsI GCAGTG 4 cut(s) 1179, 1628, 1998, 3262
BveI ACCTGC 2 cut(s) 2213, 2390
Cac8I GCNNGC 9 cut(s) 648, 664, 729, 1431, 1889, 2166, 2940, 3080, 3440
CaiI CAGNNNCTG 2 cut(s) 995, 1256
CciI TCATGA 2 cut(s) 171, 1837
CfoI GCGC 5 cut(s) 1592, 2031, 2611, 2867, 3496
Cfr13I GGNCC 3 cut(s) 70, 2813, 3610
ClaI ATCGAT 2 cut(s) 1307, 3090
CseI GACGC 3 cut(s) 184, 2537, 3662
CspCI CAANNNNNGTGG 6 cut(s) 784, 819, 1692, 1727, 2703, 2738
DraI TTTAAA 2 cut(s) 1551, 3210
DrdI GACNNNNNNGTC 1 cut(s) 961
DseDI GACNNNNNNGTC 1 cut(s) 961
EaeI YGGCCR 1 cut(s) 609
Eam1104I CTCTTC 4 cut(s) 31, 1401, 1411, 3456
EarI CTCTTC 4 cut(s) 31, 1401, 1411, 3456
EciI GGCGGA 2 cut(s) 1874, 3582
Ecl136II GAGCTC 3 cut(s) 1093, 1429, 2918
Eco105I TACGTA 1 cut(s) 2793
Eco130I CCWWGG 4 cut(s) 468, 1593, 2694, 3039
Eco147I AGGCCT 1 cut(s) 3279
Eco24I GRGCYC 6 cut(s) 226, 1095, 1431, 1473, 1923, 2920
Eco31I GGTCTC 1 cut(s) 3169
Eco47I GGWCC 3 cut(s) 70, 2813, 3610
Eco47III AGCGCT 1 cut(s) 2610
Eco53kI GAGCTC 3 cut(s) 1093, 1429, 2918
Eco72I CACGTG 1 cut(s) 638
Eco81I CCTNAGG 1 cut(s) 1464
Eco88I CYCGRG 2 cut(s) 1010, 2183
EcoICRI GAGCTC 3 cut(s) 1093, 1429, 2918
EcoO109I RGGNCCY 2 cut(s) 70, 3610
EcoRI GAATTC 2 cut(s) 348, 1563
EcoRII CCWGG 4 cut(s) 558, 945, 1121, 2371
EcoT14I CCWWGG 4 cut(s) 468, 1593, 2694, 3039
EcoT22I ATGCAT 3 cut(s) 976, 2899, 3841
EcoT38I GRGCYC 6 cut(s) 226, 1095, 1431, 1473, 1923, 2920
ErhI CCWWGG 4 cut(s) 468, 1593, 2694, 3039
FalI AAGNNNNNCTT 4 cut(s) 534, 566, 2476, 2508
FaqI GGGAC 6 cut(s) 56, 218, 458, 850, 1000, 3212
FauI CCCGC 2 cut(s) 589, 1138
FauNDI CATATG 2 cut(s) 854, 1381
FbaI TGATCA 2 cut(s) 873, 3148
FokI GGATG 4 cut(s) 331, 558, 1142, 1610
FriOI GRGCYC 6 cut(s) 226, 1095, 1431, 1473, 1923, 2920
FspAI RTGCGCAY 1 cut(s) 3495
FspBI CTAG 5 cut(s) 1560, 2046, 2606, 3650, 3861
FspI TGCGCA 1 cut(s) 3495
GlaI GCGC 5 cut(s) 1591, 2030, 2610, 2866, 3495
GsuI CTGGAG 5 cut(s) 438, 1077, 2049, 2620, 3153
HaeII RGCGCY 4 cut(s) 1593, 2032, 2612, 2868
HaeIII GGCC 6 cut(s) 341, 611, 900, 1126, 2168, 3279
HapII CCGG 4 cut(s) 220, 717, 1127, 2132
HgaI GACGC 3 cut(s) 184, 2537, 3662
HhaI GCGC 5 cut(s) 1592, 2031, 2611, 2867, 3496
Hin1I GRCGYC 1 cut(s) 1101
Hin6I GCGC 5 cut(s) 1590, 2029, 2609, 2865, 3494
HinP1I GCGC 5 cut(s) 1590, 2029, 2609, 2865, 3494
HincII GTYRAC 2 cut(s) 633, 1215
HindII GTYRAC 2 cut(s) 633, 1215
HindIII AAGCTT 1 cut(s) 355
HpaII CCGG 4 cut(s) 220, 717, 1127, 2132
Hpy166II GTNNAC 8 cut(s) 268, 633, 641, 1215, 1514, 1764, 2452, 3647
Hpy8I GTNNAC 8 cut(s) 268, 633, 641, 1215, 1514, 1764, 2452, 3647
Hpy99I CGWCG 1 cut(s) 131
HpyAV CCTTC 8 cut(s) 61, 1381, 1856, 2116, 2506, 2773, 3228, 3787
HpyCH4IV ACGT 7 cut(s) 111, 637, 815, 1101, 1374, 2792, 3667
HpySE526I ACGT 7 cut(s) 111, 637, 815, 1101, 1374, 2792, 3667
Hsp92I GRCGYC 1 cut(s) 1101
HspAI GCGC 5 cut(s) 1590, 2029, 2609, 2865, 3494
Kpn2I TCCGGA 1 cut(s) 2131
KpnI GGTACC 1 cut(s) 1117
Ksp22I TGATCA 2 cut(s) 873, 3148
LguI GCTCTTC 2 cut(s) 31, 1411
MaeI CTAG 5 cut(s) 1560, 2046, 2606, 3650, 3861
MaeII ACGT 7 cut(s) 111, 637, 815, 1101, 1374, 2792, 3667
MaeIII GTNAC 3 cut(s) 322, 1807, 2525
MfeI CAATTG 3 cut(s) 1422, 1533, 2736
MflI RGATCY 4 cut(s) 863, 1967, 1997, 2207
MhlI GDGCHC 8 cut(s) 226, 1095, 1431, 1473, 1923, 2920, 2940, 3649
MlsI TGGCCA 1 cut(s) 611
MluNI TGGCCA 1 cut(s) 611
MlyI GAGTC 5 cut(s) 1613, 2306, 3020, 3038, 3419
MmeI TCCRAC 6 cut(s) 296, 667, 1587, 2893, 3054, 3223
Mox20I TGGCCA 1 cut(s) 611
Mph1103I ATGCAT 3 cut(s) 976, 2899, 3841
MroI TCCGGA 1 cut(s) 2131
MroXI GAANNNNTTC 1 cut(s) 3396
MscI TGGCCA 1 cut(s) 611
MslI CAYNNNNRTG 3 cut(s) 2276, 3536, 3861
Msp20I TGGCCA 1 cut(s) 611
MspA1I CMGCKG 2 cut(s) 992, 2990
MspI CCGG 4 cut(s) 220, 717, 1127, 2132
MspR9I CCNGG 5 cut(s) 221, 560, 947, 1123, 2373
MunI CAATTG 3 cut(s) 1422, 1533, 2736
Mva1269I GAATGC 3 cut(s) 976, 1699, 2745
MvaI CCWGG 4 cut(s) 560, 947, 1123, 2373
MvnI CGCG 1 cut(s) 3315
NciI CCSGG 1 cut(s) 221
NcoI CCATGG 1 cut(s) 468
NdeI CATATG 2 cut(s) 854, 1381
NlaIV GGNNCC 7 cut(s) 72, 691, 865, 1115, 1976, 3021, 3612
NmuCI GTSAC 1 cut(s) 2525
NsbI TGCGCA 1 cut(s) 3495
NsiI ATGCAT 3 cut(s) 976, 2899, 3841
NspI RCATGY 1 cut(s) 1163
NspV TTCGAA 3 cut(s) 352, 697, 2749
OliI CACNNNNGTG 2 cut(s) 3536, 3861
PaeR7I CTCGAG 1 cut(s) 1010
PagI TCATGA 2 cut(s) 171, 1837
PaqCI CACCTGC 1 cut(s) 2390
PceI AGGCCT 1 cut(s) 3279
PciSI GCTCTTC 2 cut(s) 31, 1411
PcsI WCGNNNNNNNCGW 1 cut(s) 643
PctI GAATGC 3 cut(s) 976, 1699, 2745
PdmI GAANNNNTTC 1 cut(s) 3396
PfeI GAWTC 7 cut(s) 1149, 1345, 2421, 3092, 3291, 3659, 3806
PflMI CCANNNNNTGG 3 cut(s) 1256, 1937, 2322
PleI GAGTC 5 cut(s) 1612, 2306, 3020, 3038, 3418
PmaCI CACGTG 1 cut(s) 638
PmlI CACGTG 1 cut(s) 638
PpsI GAGTC 5 cut(s) 1612, 2306, 3020, 3038, 3418
Ppu21I YACGTR 2 cut(s) 638, 2793
PpuMI RGGWCCY 2 cut(s) 70, 3610
PshBI ATTAAT 2 cut(s) 1788, 2900
PsiI TTATAA 1 cut(s) 2615
Psp124BI GAGCTC 3 cut(s) 1095, 1431, 2920
Psp5II RGGWCCY 2 cut(s) 70, 3610
Psp6I CCWGG 4 cut(s) 558, 945, 1121, 2371
PspCI CACGTG 1 cut(s) 638
PspGI CCWGG 4 cut(s) 558, 945, 1121, 2371
PspN4I GGNNCC 7 cut(s) 72, 691, 865, 1115, 1976, 3021, 3612
PspPI GGNCC 3 cut(s) 70, 2813, 3610
PspPPI RGGWCCY 2 cut(s) 70, 3610
PsrI GAACNNNNNNTAC 2 cut(s) 3657, 3689
PstI CTGCAG 1 cut(s) 2221
PstNI CAGNNNCTG 2 cut(s) 995, 1256
PsuI RGATCY 4 cut(s) 863, 1967, 1997, 2207
PvuII CAGCTG 1 cut(s) 992
RseI CAYNNNNRTG 3 cut(s) 2276, 3536, 3861
SacI GAGCTC 3 cut(s) 1095, 1431, 2920
SapI GCTCTTC 2 cut(s) 31, 1411
Sau96I GGNCC 3 cut(s) 70, 2813, 3610
ScaI AGTACT 1 cut(s) 1266
SchI GAGTC 5 cut(s) 1613, 2306, 3020, 3038, 3419
ScrFI CCNGG 5 cut(s) 221, 560, 947, 1123, 2373
SduI GDGCHC 8 cut(s) 226, 1095, 1431, 1473, 1923, 2920, 2940, 3649
SfcI CTRYAG 3 cut(s) 302, 1659, 2217
Sfr274I CTCGAG 1 cut(s) 1010
SfuI TTCGAA 3 cut(s) 352, 697, 2749
SinI GGWCC 3 cut(s) 70, 2813, 3610
SlaI CTCGAG 1 cut(s) 1010
SmiMI CAYNNNNRTG 3 cut(s) 2276, 3536, 3861
SmlI CTYRAG 4 cut(s) 1010, 1401, 1803, 3519
SmoI CTYRAG 4 cut(s) 1010, 1401, 1803, 3519
SnaBI TACGTA 1 cut(s) 2793
SpeI ACTAGT 1 cut(s) 3860
SseBI AGGCCT 1 cut(s) 3279
SsiI CCGC 9 cut(s) 519, 582, 656, 1145, 1885, 2291, 2990, 3567, 3730
SspI AATATT 1 cut(s) 3060
SspMI CTAG 5 cut(s) 1560, 2046, 2606, 3650, 3861
SstI GAGCTC 3 cut(s) 1095, 1431, 2920
StuI AGGCCT 1 cut(s) 3279
StyD4I CCNGG 5 cut(s) 219, 558, 945, 1121, 2371
StyI CCWWGG 4 cut(s) 468, 1593, 2694, 3039
TaiI ACGT 7 cut(s) 114, 640, 818, 1104, 1377, 2795, 3670
TatI WGTACW 7 cut(s) 267, 360, 773, 1264, 2080, 2449, 3673
TfiI GAWTC 7 cut(s) 1149, 1345, 2421, 3092, 3291, 3659, 3806
TseFI GTSAC 1 cut(s) 2525
Tsp45I GTSAC 1 cut(s) 2525
TspGWI ACGGA 2 cut(s) 2414, 3342
Van91I CCANNNNNTGG 3 cut(s) 1256, 1937, 2322
VneI GTGCAC 1 cut(s) 3645
VpaK11BI GGWCC 3 cut(s) 70, 2813, 3610
VspI ATTAAT 2 cut(s) 1788, 2900
XapI RAATTY 6 cut(s) 260, 348, 1563, 2380, 2666, 3066
XceI RCATGY 1 cut(s) 1163
XcmI CCANNNNNNNNNTGG 1 cut(s) 2161
XhoI CTCGAG 1 cut(s) 1010
XmnI GAANNNNTTC 1 cut(s) 3396
XspI CTAG 5 cut(s) 1560, 2046, 2606, 3650, 3861
ZraI GACGTC 1 cut(s) 1102
ZrmI AGTACT 1 cut(s) 1266
Zsp2I ATGCAT 3 cut(s) 976, 2899, 3841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.